View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19032_low_2 (Length: 928)

Name: NF19032_low_2
Description: NF19032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19032_low_2
NF19032_low_2
[»] chr3 (39 HSPs)
chr3 (132-478)||(24618637-24618983)
chr3 (651-921)||(24619325-24619595)
chr3 (541-652)||(24619092-24619203)
chr3 (336-503)||(1923117-1923278)
chr3 (339-497)||(46194123-46194280)
chr3 (373-503)||(1334732-1334861)
chr3 (339-504)||(38600723-38600887)
chr3 (367-502)||(44218979-44219112)
chr3 (351-474)||(36790750-36790872)
chr3 (377-503)||(48409611-48409738)
chr3 (339-496)||(51164986-51165142)
chr3 (339-430)||(30261420-30261509)
chr3 (390-497)||(41287295-41287402)
chr3 (339-466)||(26479785-26479918)
chr3 (377-430)||(9218244-9218297)
chr3 (377-502)||(21296458-21296582)
chr3 (372-504)||(9017827-9017958)
chr3 (339-431)||(17776911-17777002)
chr3 (339-431)||(19078212-19078303)
chr3 (377-497)||(39329705-39329824)
chr3 (369-432)||(2868672-2868734)
chr3 (394-496)||(54021429-54021531)
chr3 (374-502)||(54122176-54122303)
chr3 (345-419)||(39144770-39144845)
chr3 (375-498)||(53051058-53051180)
chr3 (393-496)||(53754034-53754137)
chr3 (339-497)||(5245445-5245602)
chr3 (339-417)||(36315651-36315729)
chr3 (393-483)||(38524263-38524352)
chr3 (356-497)||(32977724-32977864)
chr3 (339-396)||(38215761-38215818)
chr3 (339-503)||(21585327-21585490)
chr3 (377-504)||(42547061-42547187)
chr3 (369-432)||(51636843-51636905)
chr3 (356-394)||(26832197-26832235)
chr3 (345-407)||(34081017-34081079)
chr3 (373-458)||(39866504-39866588)
chr3 (377-502)||(43639471-43639595)
chr3 (367-412)||(47684858-47684903)
[»] chr1 (71 HSPs)
chr1 (43-301)||(29051806-29052064)
chr1 (337-503)||(29756057-29756223)
chr1 (339-504)||(26583754-26583919)
chr1 (374-503)||(37541065-37541194)
chr1 (339-503)||(24131318-24131481)
chr1 (339-497)||(26924037-26924195)
chr1 (572-652)||(29051305-29051385)
chr1 (339-482)||(3160604-3160747)
chr1 (657-757)||(29051074-29051174)
chr1 (344-497)||(46363332-46363486)
chr1 (338-488)||(50926789-50926939)
chr1 (373-497)||(5503453-5503575)
chr1 (339-503)||(29225322-29225489)
chr1 (372-497)||(37925192-37925321)
chr1 (344-497)||(40754336-40754488)
chr1 (372-488)||(16956585-16956701)
chr1 (339-497)||(34813950-34814107)
chr1 (339-497)||(27932746-27932908)
chr1 (339-503)||(4466072-4466235)
chr1 (345-425)||(26760381-26760461)
chr1 (369-503)||(16040104-16040237)
chr1 (400-497)||(31798451-31798546)
chr1 (350-497)||(3718779-3718924)
chr1 (339-502)||(11425787-11425949)
chr1 (344-473)||(14090697-14090822)
chr1 (394-500)||(36232761-36232867)
chr1 (339-419)||(2886323-2886403)
chr1 (373-497)||(10587533-10587656)
chr1 (353-496)||(25983565-25983702)
chr1 (375-497)||(27209921-27210042)
chr1 (376-497)||(705303-705424)
chr1 (338-474)||(36326122-36326257)
chr1 (339-502)||(2219366-2219528)
chr1 (374-493)||(13409730-13409849)
chr1 (375-474)||(28706577-28706675)
chr1 (357-504)||(32348244-32348390)
chr1 (394-503)||(14352593-14352705)
chr1 (375-432)||(4659529-4659585)
chr1 (394-498)||(37495861-37495963)
chr1 (369-497)||(27391380-27391507)
chr1 (367-423)||(34332217-34332272)
chr1 (377-497)||(40061842-40061961)
chr1 (374-430)||(40988450-40988506)
chr1 (372-432)||(49494114-49494173)
chr1 (369-481)||(49944981-49945092)
chr1 (374-498)||(50267391-50267514)
chr1 (394-498)||(51049540-51049643)
chr1 (367-430)||(7224500-7224563)
chr1 (301-340)||(29051382-29051421)
chr1 (339-504)||(29225779-29225942)
chr1 (414-497)||(33149306-33149389)
chr1 (372-488)||(44580558-44580676)
chr1 (386-496)||(45889212-45889322)
chr1 (374-475)||(50773301-50773399)
chr1 (439-497)||(2886204-2886262)
chr1 (374-496)||(21304760-21304880)
chr1 (394-488)||(9590554-9590650)
chr1 (369-458)||(40019831-40019919)
chr1 (373-497)||(32587798-32587921)
chr1 (372-432)||(36467146-36467205)
chr1 (369-504)||(28839365-28839499)
chr1 (369-431)||(5040523-5040584)
chr1 (374-432)||(5442438-5442495)
chr1 (373-435)||(6787342-6787403)
chr1 (396-498)||(12267605-12267707)
chr1 (369-430)||(25418743-25418802)
chr1 (367-424)||(39420692-39420750)
chr1 (377-422)||(2571469-2571514)
chr1 (366-411)||(18186142-18186187)
chr1 (376-504)||(27831872-27831997)
chr1 (372-436)||(37525134-37525195)
[»] chr8 (47 HSPs)
chr8 (18-301)||(1354819-1355101)
chr8 (19-301)||(1344462-1344744)
chr8 (339-503)||(14689987-14690151)
chr8 (350-497)||(8394180-8394329)
chr8 (339-497)||(33743809-33743967)
chr8 (339-497)||(14748620-14748780)
chr8 (339-474)||(32231302-32231437)
chr8 (372-495)||(45420888-45421011)
chr8 (372-488)||(1494197-1494313)
chr8 (357-497)||(25174519-25174659)
chr8 (718-876)||(1344916-1345072)
chr8 (357-503)||(5392076-5392221)
chr8 (372-497)||(886397-886522)
chr8 (350-503)||(8566041-8566191)
chr8 (377-504)||(2195494-2195620)
chr8 (350-497)||(39998196-39998342)
chr8 (369-504)||(42412330-42412464)
chr8 (211-288)||(10043378-10043455)
chr8 (375-496)||(29638335-29638455)
chr8 (394-502)||(14117490-14117598)
chr8 (339-497)||(29451382-29451540)
chr8 (375-498)||(28791340-28791462)
chr8 (377-496)||(40077705-40077823)
chr8 (368-497)||(27868271-27868399)
chr8 (345-498)||(27973609-27973761)
chr8 (345-498)||(28030878-28031030)
chr8 (373-488)||(9734119-9734232)
chr8 (339-430)||(2797139-2797230)
chr8 (369-504)||(7258314-7258448)
chr8 (342-412)||(8840445-8840514)
chr8 (378-496)||(15559086-15559203)
chr8 (349-503)||(37459377-37459521)
chr8 (334-498)||(41726553-41726714)
chr8 (339-430)||(36011909-36012001)
chr8 (596-643)||(1354159-1354206)
chr8 (367-445)||(325028-325105)
chr8 (372-498)||(29615830-29615955)
chr8 (400-498)||(41759607-41759705)
chr8 (339-428)||(2875005-2875094)
chr8 (380-497)||(5423122-5423238)
chr8 (376-488)||(26677115-26677227)
chr8 (373-497)||(139055-139178)
chr8 (362-497)||(11637173-11637308)
chr8 (369-432)||(37703085-37703147)
chr8 (394-497)||(5878196-5878300)
chr8 (372-454)||(12653763-12653844)
chr8 (379-497)||(28802800-28802917)
[»] chr4 (49 HSPs)
chr4 (339-503)||(28330821-28330985)
chr4 (350-498)||(8759811-8759959)
chr4 (339-503)||(20964204-20964368)
chr4 (339-503)||(37315838-37316002)
chr4 (376-497)||(38319944-38320065)
chr4 (350-497)||(32949775-32949923)
chr4 (373-503)||(42132840-42132972)
chr4 (372-497)||(49218732-49218856)
chr4 (353-497)||(53848679-53848823)
chr4 (373-497)||(48400582-48400705)
chr4 (373-497)||(22020462-22020584)
chr4 (339-500)||(25902378-25902539)
chr4 (339-430)||(5499349-5499440)
chr4 (339-458)||(54217441-54217562)
chr4 (339-497)||(22872303-22872462)
chr4 (394-503)||(42051627-42051736)
chr4 (353-424)||(18872585-18872656)
chr4 (366-497)||(47277625-47277756)
chr4 (357-497)||(4360343-4360482)
chr4 (339-439)||(41594764-41594864)
chr4 (357-504)||(33047518-33047664)
chr4 (374-497)||(34790903-34791026)
chr4 (356-497)||(39052835-39052975)
chr4 (337-501)||(28279866-28280029)
chr4 (377-497)||(41436514-41436633)
chr4 (345-421)||(46958828-46958904)
chr4 (357-432)||(8295127-8295201)
chr4 (375-498)||(29550680-29550802)
chr4 (369-504)||(41203763-41203897)
chr4 (366-411)||(36045994-36046039)
chr4 (369-497)||(49448874-49448999)
chr4 (374-430)||(13529961-13530017)
chr4 (357-504)||(42024136-42024282)
chr4 (439-497)||(36047116-36047174)
chr4 (345-402)||(11583647-11583704)
chr4 (369-504)||(40020892-40021029)
chr4 (369-425)||(12619792-12619847)
chr4 (369-497)||(17237076-17237203)
chr4 (369-497)||(38160099-38160226)
chr4 (447-498)||(10099749-10099800)
chr4 (345-504)||(35027420-35027578)
chr4 (394-497)||(35998088-35998191)
chr4 (369-504)||(41710091-41710225)
chr4 (374-412)||(1920846-1920884)
chr4 (377-502)||(25149479-25149604)
chr4 (376-497)||(54729434-54729558)
chr4 (393-494)||(13719811-13719912)
chr4 (399-496)||(49306621-49306718)
chr4 (387-500)||(49401686-49401798)
[»] chr2 (48 HSPs)
chr2 (339-503)||(13222095-13222259)
chr2 (339-502)||(314455-314618)
chr2 (344-497)||(6972462-6972614)
chr2 (339-497)||(4282934-4283093)
chr2 (350-488)||(928466-928603)
chr2 (373-497)||(2048325-2048448)
chr2 (373-504)||(43950399-43950529)
chr2 (373-498)||(9724910-9725034)
chr2 (332-503)||(37528981-37529151)
chr2 (369-503)||(2427387-2427521)
chr2 (368-503)||(38872867-38873000)
chr2 (350-497)||(7213508-7213654)
chr2 (341-504)||(43427005-43427167)
chr2 (375-498)||(24356143-24356265)
chr2 (357-419)||(5425969-5426031)
chr2 (367-497)||(10069530-10069659)
chr2 (374-485)||(38280148-38280258)
chr2 (377-498)||(18181168-18181288)
chr2 (409-496)||(31348545-31348632)
chr2 (336-498)||(39166606-39166771)
chr2 (369-436)||(45464162-45464228)
chr2 (401-503)||(1908472-1908574)
chr2 (375-497)||(18460521-18460642)
chr2 (375-497)||(36748181-36748302)
chr2 (376-503)||(3199925-3200049)
chr2 (368-445)||(14384057-14384133)
chr2 (377-497)||(31592583-31592703)
chr2 (357-497)||(9472455-9472594)
chr2 (369-432)||(32556270-32556330)
chr2 (374-504)||(2756700-2756829)
chr2 (350-432)||(6213778-6213859)
chr2 (374-474)||(14890373-14890470)
chr2 (369-429)||(883100-883159)
chr2 (373-432)||(8550593-8550651)
chr2 (366-485)||(12949908-12950026)
chr2 (369-432)||(28527062-28527124)
chr2 (373-432)||(40965112-40965170)
chr2 (369-432)||(44736964-44737026)
chr2 (374-488)||(3123688-3123801)
chr2 (376-422)||(5007194-5007240)
chr2 (374-460)||(43077678-43077763)
chr2 (362-412)||(44024825-44024875)
chr2 (399-497)||(44424241-44424337)
chr2 (372-432)||(435026-435087)
chr2 (339-435)||(10394202-10394295)
chr2 (356-397)||(14306031-14306072)
chr2 (367-432)||(39159717-39159780)
chr2 (367-432)||(39209414-39209477)
[»] chr6 (20 HSPs)
chr6 (350-503)||(15371791-15371943)
chr6 (339-497)||(15325180-15325337)
chr6 (350-497)||(15321153-15321299)
chr6 (352-497)||(15355608-15355752)
chr6 (339-497)||(34803621-34803781)
chr6 (339-498)||(33921386-33921544)
chr6 (350-497)||(15351311-15351457)
chr6 (393-495)||(3166078-3166180)
chr6 (352-504)||(31075854-31076005)
chr6 (393-496)||(3874020-3874123)
chr6 (372-503)||(4552936-4553059)
chr6 (339-423)||(16126318-16126402)
chr6 (374-502)||(3604552-3604679)
chr6 (372-432)||(15081521-15081580)
chr6 (372-436)||(33109467-33109530)
chr6 (388-475)||(20027637-20027724)
chr6 (369-435)||(7739465-7739530)
chr6 (344-430)||(20383944-20384030)
chr6 (376-502)||(31265807-31265932)
chr6 (437-503)||(33017958-33018024)
[»] chr7 (43 HSPs)
chr7 (339-503)||(32776010-32776174)
chr7 (339-498)||(29996945-29997104)
chr7 (343-493)||(47238254-47238404)
chr7 (339-503)||(37264340-37264502)
chr7 (373-497)||(32971968-32972092)
chr7 (373-493)||(23111039-23111159)
chr7 (389-497)||(10355701-10355809)
chr7 (407-503)||(38589761-38589857)
chr7 (353-488)||(8150001-8150135)
chr7 (375-498)||(45218111-45218233)
chr7 (375-497)||(2849288-2849409)
chr7 (344-430)||(33773965-33774051)
chr7 (368-497)||(43007927-43008057)
chr7 (375-503)||(30659433-30659560)
chr7 (374-497)||(9602894-9603017)
chr7 (374-497)||(9830465-9830588)
chr7 (339-497)||(34064248-34064405)
chr7 (368-481)||(6697130-6697242)
chr7 (372-488)||(21446478-21446594)
chr7 (350-429)||(39143601-39143680)
chr7 (332-454)||(27621913-27622035)
chr7 (387-497)||(36070138-36070247)
chr7 (374-430)||(9658937-9658993)
chr7 (357-432)||(11616660-11616733)
chr7 (419-503)||(18731466-18731550)
chr7 (369-453)||(45890805-45890888)
chr7 (394-496)||(39343644-39343744)
chr7 (374-439)||(5724660-5724724)
chr7 (374-502)||(7425829-7425957)
chr7 (367-451)||(36194599-36194684)
chr7 (377-497)||(3667832-3667951)
chr7 (214-270)||(13590862-13590918)
chr7 (116-207)||(13590644-13590735)
chr7 (414-497)||(24288456-24288539)
chr7 (369-504)||(29257573-29257707)
chr7 (374-497)||(37490570-37490692)
chr7 (367-435)||(39498768-39498838)
chr7 (357-432)||(44604413-44604487)
chr7 (381-419)||(37496354-37496392)
chr7 (375-432)||(23058916-23058972)
chr7 (356-397)||(31549556-31549597)
chr7 (399-504)||(33584589-33584694)
chr7 (372-429)||(49100453-49100509)
[»] chr5 (40 HSPs)
chr5 (339-496)||(5147413-5147570)
chr5 (339-497)||(38978937-38979095)
chr5 (356-503)||(13016298-13016444)
chr5 (339-497)||(15564810-15564963)
chr5 (356-497)||(13087676-13087816)
chr5 (337-503)||(5357733-5357898)
chr5 (373-495)||(42818938-42819060)
chr5 (351-487)||(4194975-4195112)
chr5 (352-497)||(31090337-31090482)
chr5 (339-502)||(16926006-16926171)
chr5 (339-503)||(39060340-39060503)
chr5 (350-503)||(25111078-25111229)
chr5 (350-503)||(25170169-25170320)
chr5 (337-497)||(31196352-31196512)
chr5 (373-504)||(11099429-11099559)
chr5 (350-503)||(25108600-25108751)
chr5 (350-503)||(25167692-25167843)
chr5 (339-496)||(39060868-39061028)
chr5 (400-497)||(15898224-15898321)
chr5 (438-499)||(7871344-7871405)
chr5 (355-503)||(35988661-35988808)
chr5 (374-502)||(42575591-42575718)
chr5 (376-498)||(4044433-4044553)
chr5 (367-497)||(6172926-6173055)
chr5 (367-496)||(7311128-7311254)
chr5 (375-503)||(36006849-36006973)
chr5 (344-417)||(6629318-6629391)
chr5 (339-493)||(35666922-35667073)
chr5 (339-397)||(22983076-22983134)
chr5 (339-412)||(792095-792168)
chr5 (369-453)||(41594795-41594878)
chr5 (369-432)||(858433-858495)
chr5 (373-432)||(3725284-3725342)
chr5 (339-402)||(15898605-15898668)
chr5 (373-424)||(25344692-25344742)
chr5 (385-424)||(35012812-35012851)
chr5 (393-488)||(35968762-35968857)
chr5 (369-432)||(42211427-42211489)
chr5 (367-417)||(39212500-39212550)
chr5 (369-498)||(33988232-33988360)
[»] scaffold0576 (1 HSPs)
scaffold0576 (352-497)||(598-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (350-496)||(10717-10864)
[»] scaffold0155 (1 HSPs)
scaffold0155 (339-463)||(7838-7960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (372-496)||(12385-12509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (357-432)||(98923-98997)
[»] scaffold0003 (1 HSPs)
scaffold0003 (374-498)||(352415-352536)
[»] scaffold0578 (1 HSPs)
scaffold0578 (376-422)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (372-489)||(9503-9618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (376-497)||(5851-5969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (409-475)||(158068-158134)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 132 - 478
Target Start/End: Original strand, 24618637 - 24618983
Alignment:
Q  132 cttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24618637 cttttcggtttctcaatgttaataattctcaaatttacaaagttttctagaggtaattagaaaattcataattagtagtcactttgtttctgatcattgt 24618736  T
Q  232 tatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaaatattcaagtcctaaaacgtttaattgccc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24618737 tatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaaatattcaagtcctataacgtttaattgccc 24618836  T
Q  332 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618837 aaaaaagtactttctccctcccattttaactgaaccttttgctcgtttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 24618936  T
Q  432 aatgcctttatcaactattggtgtatttttctttagcataaatacaa 478  Q
    | ||||||||||||||| ||||||||| |||||||||||||||||||    
T  24618937 agtgcctttatcaactagtggtgtattcttctttagcataaatacaa 24618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 651 - 921
Target Start/End: Original strand, 24619325 - 24619595
Alignment:
Q  651 tagttcattattttagtttcacatgaagaaactttagccattgactgattgctgtagatgtaaccagttcttagttcaaattcatacttttatttatttt 750  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  24619325 tagttcattattttagtttcacatgaagaaactttagccattgattgattgctctagatgtaaccagttcttagttcaaattcatacttttatttatctt 24619424  T
Q  751 gactttttggttgattttagtgtaatattcaatttagataatattgggataatttatttcacttttgcccttccatcgtttaagagaatccgagttgaaa 850  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||    
T  24619425 gactttttggttgattttagtggagtattcaatttagataatattgggatcatttatttcacttttgcccttccatcgtttaagagaatccgaattaaaa 24619524  T
Q  851 cctagtcgaaaaaatcattggtcagaaccaacttcccgacctaactgttgattattatcatggttcatctc 921  Q
    |||||||||||||||||||||||| ||||||| ||||  || || ||||||||||||||||||| ||||||    
T  24619525 cctagtcgaaaaaatcattggtcaaaaccaacctcccagccaaattgttgattattatcatggtccatctc 24619595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 541 - 652
Target Start/End: Original strand, 24619092 - 24619203
Alignment:
Q  541 gcaaatgactcggttagtatgagacggagggagtacaattttttcagctagtcattttgcagccattcaaagttgcattagaaaaaggaaccaaattgtt 640  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24619092 gcaaatgactcagttagtatgagacggagggagtacaattttttcagctagtcattttgcagccattcaaagttgcattagaaaaaggaaccaaattgct 24619191  T
Q  641 ctgttcctaata 652  Q
    ||||||||||||    
T  24619192 ctgttcctaata 24619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 336 - 503
Target Start/End: Complemental strand, 1923278 - 1923117
Alignment:
Q  336 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    ||||||| ||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    ||    
T  1923278 aagtactccctccgtcccattttaactgagccctt-gctcatttcacacttattaagaaaaagtgtataagtgaaa--aagagaaaaatggttt---gtg 1923185  T
Q  436 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || ||||||||| |||||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  1923184 cccttatcaactgttggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 1923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 46194123 - 46194280
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||| ||||||||| || ||  || |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| | ||||     
T  46194123 tactccctccgtcccaatttaactgagcccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgccc 46194222  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||| |||||| | || |||||| ||||||| ||||||||||||| ||||||||    
T  46194223 ttatcaactgttggtgca-ttctctttatcataaatgcaaagtagaatatattgaattg 46194280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 373 - 503
Target Start/End: Original strand, 1334732 - 1334861
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||  |||||||||| | |||||| |||||| |||||||||||  |||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  1334732 ctcatttcacacagattaagaaaa-gcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataa 1334830  T
Q  473 atacaaagtagaatatgttgaattggaagtg 503  Q
    ||  |||||||||||| ||||||||| ||||    
T  1334831 atgtaaagtagaatatattgaattgggagtg 1334861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 339 - 504
Target Start/End: Original strand, 38600723 - 38600887
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||| ||||| || ||| ||| |||||||| |||  |||||||||| |||||||| |||||  |||||||||||| |||| | | |||    
T  38600723 tactccctccatcccagtttaattggaccattttctcatttcgcacagattaagaaaa-gtgtataaatgaaaaagagagaaaaatgattttgagtccct 38600821  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    ||||||| |||||||| ||| ||||||| |||||||  |||||| ||||| ||||| ||| |||||    
T  38600822 ttatcaagtattggtgcattcttctttaccataaatgtaaagtataatatattgaactgggagtga 38600887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 367 - 502
Target Start/End: Original strand, 44218979 - 44219112
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||| | || |||    || | |||||| |||   | |||    
T  44218979 cttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtgtctt--gtaagtgttggtgcattccccatta 44219076  T
Q  467 gcataaatacaaagtagaatatgttgaattggaagt 502  Q
     ||||||||||||||||||||| |||||||||||||    
T  44219077 tcataaatacaaagtagaatatattgaattggaagt 44219112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 36790750 - 36790872
Alignment:
Q  351 cccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactatt 450  Q
    |||||||||||||| ||||   ||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  ||| |  ||  ||||||||||||    
T  36790750 cccattttaactgagccttga-ctcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaatgagtttgagcgcacttatcaactatt 36790848  T
Q  451 ggtgtatttttctttagcataaat 474  Q
    |||||||| ||||||| |||||||    
T  36790849 ggtgtattcttctttatcataaat 36790872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 377 - 503
Target Start/End: Complemental strand, 48409738 - 48409611
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa--tggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    |||||||| |||||||||||| ||||||| |||||| |||||| |||  | ||||| | || |||| |||| |||||||| ||| ||||||| |||||||    
T  48409738 tttcacacatattaagaaaaa-tgtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaagtattggtggattcttctttatcataaat 48409640  T
Q  475 acaaagtagaatatgttgaattggaagtg 503  Q
      |||||||||||||||||||||| ||||    
T  48409639 gtaaagtagaatatgttgaattgggagtg 48409611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 339 - 496
Target Start/End: Complemental strand, 51165142 - 51164986
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||| | ||||| ||| || ||| || |||||||||  |||||||||| |||||||| | |||| |||||||||||  |||| | || ||    
T  51165142 tactccctccgtccgagtttaattgagccattttctgatttcacacaaattaagaaaa-gtgtataaataaaagagagagaaaaataattttgagtgtct 51165044  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    ||||||| |||||||| ||| ||||||| |||||||  |||||||||||| |||||||    
T  51165043 ttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 51164986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 30261420 - 30261509
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||| ||||| ||||||||||||||| ||||||| ||||||||| | |||||||||| ||||  |||||||||| ||||||||||| |||||    
T  30261420 tactccctccgtcccattttaactgagccttttgttcatttcacgcatattaagaaagagtg--taagtgaaagagagagaaaaatagtttt 30261509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 497
Target Start/End: Complemental strand, 41287402 - 41287295
Alignment:
Q  390 aagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatg 489  Q
    |||||||  |||||||||||||| ||||||||||||||||| | |  |||| |||| ||||| || ||| ||||||| |||||||  ||||||||||||     
T  41287402 aagaaaacatgtataagtgaaagagagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatata 41287303  T
Q  490 ttgaattg 497  Q
    ||||||||    
T  41287302 ttgaattg 41287295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 26479785 - 26479918
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataa------gtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||  | |||||||||||| || || | |||||||||||||||||||||||||| |||||      |||  || |||||| | |||||||| |    
T  26479785 tacttcctccgcctcattttaactgagcccttggttcatttcacacttattaagaaaaagtatataagtgtgtgtgtgagagagagagagatggttttga 26479884  T
Q  433 atgcctttatcaactattggtgtatttttcttta 466  Q
    |||| ||||||||||||||||| ||| |||||||    
T  26479885 atgcatttatcaactattggtgcattcttcttta 26479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 430
Target Start/End: Complemental strand, 9218297 - 9218244
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  9218297 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 9218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 502
Target Start/End: Original strand, 21296458 - 21296582
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| || ||||| ||| ||||||| |||| | ||||| |||||| ||||||||||  || | || |||||||| |||||||  || ||||||| |    
T  21296458 tttcacacatactaagacaaa-tgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatgc 21296556  T
Q  477 aaagtagaatatgttgaattggaagt 502  Q
    |||||||||||| |||||||||||||    
T  21296557 aaagtagaatatattgaattggaagt 21296582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 372 - 504
Target Start/End: Complemental strand, 9017958 - 9017827
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||| |||||| ||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| | || |||||||| ||| | |  ||  |||    
T  9017958 gctcatttcacacatattaaaaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattata 9017860  T
Q  472 aatacaaagtagaatatgttgaattggaagtga 504  Q
    ||| ||||||  ||||| |||||||||||||||    
T  9017859 aatgcaaagtgaaatatattgaattggaagtga 9017827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 17776911 - 17777002
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  17776911 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 17777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 19078212 - 19078303
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||||||| |||||  ||||||||  | |||||||||||||||| |||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  19078212 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggtttta 19078303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 39329705 - 39329824
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| |||||||||||| |||||||||||||| || ||| |||| ||||| |||| | || | || |||||||| ||| ||  ||| ||||||| |    
T  39329705 tttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 39329803  T
Q  477 aaagtagaatatgttgaattg 497  Q
    |||||||||||| ||||||||    
T  39329804 aaagtagaatatattgaattg 39329824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 2868734 - 2868672
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | |||||||||||||||||||    
T  2868734 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaaaatggttttaa 2868672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 54021429 - 54021531
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| | |||| |||||||||||| |||| | || ||||||||| ||||| || ||| |||||||  ||||||  |||||||||||| ||||    
T  54021429 aaaagtgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgtaaagtagaatatattga 54021528  T
Q  494 att 496  Q
    |||    
T  54021529 att 54021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 54122176 - 54122303
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||  ||| | || |||||||| ||| | |  || ||||||    
T  54122176 tcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatgtttttgttaagtattggtgcattctccactatcataaa 54122274  T
Q  474 tacaaagtagaatatgttgaattggaagt 502  Q
    | ||||||  ||||| |||||||||||||    
T  54122275 tgcaaagtgaaatatattgaattggaagt 54122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 345 - 419
Target Start/End: Complemental strand, 39144845 - 39144770
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaaga-aaaagtgtataagtgaaagggagaga 419  Q
    |||| ||||||| ||| ||| ||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  39144845 ctccatcccattataagtgagccttttgttcatttcacacatattaagaaaaaaatgtataagtgaaagagagaga 39144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 375 - 498
Target Start/End: Complemental strand, 53051180 - 53051058
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| |||| |||| ||| ||| || |||| |||||||    
T  53051180 catttcacacagattaagaaaa-gtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtatttgtgcattcttgtttatcataaat 53051082  T
Q  475 acaaagtagaatatgttgaattgg 498  Q
      |||||| ||||| |||||||||    
T  53051081 gtaaagtataatatattgaattgg 53051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 393 - 496
Target Start/End: Original strand, 53754034 - 53754137
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 492  Q
    ||||||||||||| |||||  |||||||||||| |||| | || ||||   || |||||||| ||| ||||||| |||||||  |||||||||||| |||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaatatattg 53754133  T
Q  493 aatt 496  Q
    ||||    
T  53754134 aatt 53754137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 5245602 - 5245445
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||||  |||||||| || ||||||||  ||| || |||||||| ||| ||||||  |||| | ||||||||||| ||||||| |||      
T  5245602 tactccctccgtcccagattaactgagccatttgctcaaatcatacatattaagacaaa-tgtatacatgaaggagagagaaaaatagttttaagtgctc 5245504  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || | || |||||||||||| | |  || |||||||||||||| |||||| ||||||||    
T  5245503 ttgttaagtattggtgtattctccaatatcataaatacaaagtggaatatattgaattg 5245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 417
Target Start/End: Original strand, 36315651 - 36315729
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 417  Q
    |||| ||||| ||| ||| ||||| | | ||||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  36315651 tactccctccgtcctattataactaagctttttgctcattccacacatattaagaaaaagtgtataagtaaaagagaga 36315729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 483
Target Start/End: Original strand, 38524263 - 38524352
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtag 483  Q
    ||||| ||||||||||||||  | |||||||| ||||| ||||  |||||||| ||||| |||||||||| | | ||||||||||||||||    
T  38524263 aaaaaatgtataagtgaaagaaaaagaaaaatagttttgaatgt-tttatcaagtattgatgtatttttcatcatcataaatacaaagtag 38524352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 497
Target Start/End: Original strand, 32977724 - 32977864
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 455  Q
    ||||||||| || |||  |||||||||||  |||||||||| ||||||||   |||| | ||||||||| ||||| | ||| ||| |||| ||||| ||     
T  32977724 tttaactgagccattttttcatttcacacggattaagaaaa-gtgtataaagtaaagagggagaaaaatagttttgagtgcatttttcaagtattgatgc 32977822  T
Q  456 atttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||||| |||||||  ||  |||||||| ||||||||    
T  32977823 atttttctttatcataaatgtaatttagaatatattgaattg 32977864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 38215761 - 38215818
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa 396  Q
    |||||||||| || || ||||| |||| |||||||||||||||||||||| |||||||    
T  38215761 tacttcctccgtctcaatttaaatgaatcttttgctcatttcacacttataaagaaaa 38215818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 21585327 - 21585490
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||||||||| ||||| ||| |  ||| |||||| |||| ||||| ||||||| | ||| |||||| |  ||||||||||| |||| | || ||    
T  21585327 tactccctccctcccaatttaattgagcaatttactcattccacatttattgagaaaaa-tatattagtgaaggacagagaaaaatgattttgagtgtct 21585425  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || | || |||||||  ||| ||||||| |||||||  ||| |||||||| ||| ||||||||||    
T  21585426 ttgttaattattggttcattcttctttatcataaatgtaaaatagaatatattgtattggaagtg 21585490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 504
Target Start/End: Original strand, 42547061 - 42547187
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| |||||||||||| | ||||||| |||| |||| |||||| ||||| |||| | || | || |||||||| ||| ||  ||| ||||||| |    
T  42547061 tttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 42547159  T
Q  477 aaagtagaatatgttgaattggaagtga 504  Q
    |||  ||||||| ||||||||| |||||    
T  42547160 aaaagagaatatattgaattgggagtga 42547187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 51636843 - 51636905
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||| |||||||| | ||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  51636843 tttgttcatttcataattattaagaaaaa-tgtttaagtgaaggagagagaaaaatggttttaa 51636905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 356 - 394
Target Start/End: Complemental strand, 26832235 - 26832197
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaa 394  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  26832235 tttaactgagccttttgctcaattcacacttattaagaa 26832197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 407
Target Start/End: Original strand, 34081017 - 34081079
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagt 407  Q
    |||| ||||||||||||  || |||||| | |||| |||| ||||||||||||||||||||||    
T  34081017 ctccatcccattttaacccaaacttttgtttattttacacatattaagaaaaagtgtataagt 34081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 458
Target Start/End: Original strand, 39866504 - 39866588
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatt 458  Q
    |||||||||||| |||||||||||| ||||||| |||| |  |||||||||| ||||||| ||  ||| | || ||||||||||||    
T  39866504 ctcatttcacacatattaagaaaaa-tgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtatt 39866588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 502
Target Start/End: Original strand, 43639471 - 43639595
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| |||||||| ||| | ||||| |||| | ||||||||||||||||||| |||  || | || ||||| || ||||| |  || ||||||| |    
T  43639471 tttcacacatattaagacaaa-tatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcattttccactatcataaatgc 43639569  T
Q  477 aaagtagaatatgttgaattggaagt 502  Q
    |||||  ||||| |||||||||||||    
T  43639570 aaagtgaaatatattgaattggaagt 43639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 47684903 - 47684858
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 412  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  47684903 cttttgttcatttcacacatattaagaaaaggtgtacaagtgaaag 47684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 1e-93; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 43 - 301
Target Start/End: Complemental strand, 29052064 - 29051806
Alignment:
Q  43 ggtagagtaagcatttttaaattttgaatagctttatcactatttcaactatgcaacaatttccttgtgattgtgaagtcagtgtgttacttttcggttt 142  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  29052064 ggtagagtaagcatttttaaattttgaattgcttcatcactatttcaactatgcaacaatttctttgtgattgtgaagtcagtgtgttactatttggttt 29051965  T
Q  143 ctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttgtttttcatcattgttatgttaattt 242  Q
    ||||||||||  ||| |||||||||   |||||||| | | |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29051964 ctcaatgttagaaatgctcaaatttgtgaagttttctatatgtaatttgaaaattcataattagtagtcactttgtttctgatcattgttatgttaattt 29051865  T
Q  243 ctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaa 301  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  29051864 ctctaaggaccagattgatgaaatcatgaaagtgctttagattttgggtgtcctttcaa 29051806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 337 - 503
Target Start/End: Original strand, 29756057 - 29756223
Alignment:
Q  337 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    |||||| ||||| |||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||    
T  29756057 agtactccctccgtcccattttaacggagcccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgc 29756156  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    | |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  29756157 ccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 29756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 339 - 504
Target Start/End: Complemental strand, 26583919 - 26583754
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| | |||||    
T  26583919 tactccctccgtcccattttaactgaacccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcct 26583820  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||||||||||||| ||| ||||||| ||||||| |||| |||||||| ||||||||| |||||    
T  26583819 ttatcaactattggtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtga 26583754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 37541065 - 37541194
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||| |||||||  |||||    
T  37541065 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaa 37541164  T
Q  474 tacaaagtagaatatgttgaattggaagtg 503  Q
    |  |||||||||||| ||||||||||||||    
T  37541165 tgtaaagtagaatatattgaattggaagtg 37541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 24131318 - 24131481
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttg-ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    |||| ||||| |||||||||||||||  | |||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||    
T  24131318 tactccctccgtcccattttaactgagtcatttgactcatttcacacttattaagaaaaagcgtataagtgaaag--agagaaaaatggttttgaatgcc 24131415  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
     ||||||||||| |||| ||| ||||||| ||||||| ||||||| ||||| ||||||||| ||||    
T  24131416 cttatcaactataggtgcattcttctttatcataaatgcaaagtataatatattgaattgggagtg 24131481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 26924037 - 26924195
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||| |||||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | ||||     
T  26924037 tactccctccgtcccgttttaactgagctcttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgccc 26924136  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||| ||||| ||||||||    
T  26924137 ttatcaactattggtgcattcttctttatcataaatgcaaagtataatatattgaattg 26924195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 572 - 652
Target Start/End: Complemental strand, 29051385 - 29051305
Alignment:
Q  572 agtacaattttttcagctagtcattttgcagccattcaaagttgcattagaaaaaggaaccaaattgttctgttcctaata 652  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29051385 agtagaattttttcagctagtcattttgcagccattcaaagttgcattagaaaaaggaaccaaattgttctgttcctaata 29051305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 339 - 482
Target Start/End: Original strand, 3160604 - 3160747
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| | ||||     
T  3160604 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgccc 3160703  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagta 482  Q
    || ||||||||||||| ||| ||||||| ||||||| |||||||    
T  3160704 ttgtcaactattggtgcattattctttatcataaatgcaaagta 3160747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 657 - 757
Target Start/End: Complemental strand, 29051174 - 29051074
Alignment:
Q  657 attattttagtttcacatgaagaaactttagccattgactgattgctgtagatgtaaccagttcttagttcaaattcatacttttatttattttgacttt 756  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  29051174 attattttagtttcatatgaaaaaactttagccattgactgattgctatagaagtaaccacttcttagttcaaattcatacttttatttatcttggcttt 29051075  T
Q  757 t 757  Q
    |    
T  29051074 t 29051074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 344 - 497
Target Start/End: Original strand, 46363332 - 46363486
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc-ctttat 442  Q
    ||||| ||| ||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||| || |||||| |||||  ||| | ||| ||||||    
T  46363332 cctccgtccaattttaattgagcctttcactcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttat 46363431  T
Q  443 caactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| ||||| ||||||||    
T  46363432 caactattggtgcattcttctttatcataaatgcaaagtaaaatatattgaattg 46363486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 338 - 488
Target Start/End: Complemental strand, 50926939 - 50926789
Alignment:
Q  338 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    ||||| ||||| || |||||||||||| | |||| |||||||||||  |||||||||||| ||||||||  |||| ||||||||||||||||| |||||     
T  50926939 gtactccctccgtctcattttaactgagcttttttctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgca 50926840  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 488  Q
    ||| |||| |||||||| ||| ||||||| |||||||  ||||||||||||    
T  50926839 tttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatat 50926789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 5503575 - 5503453
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||  | || |||||||||||||||| ||| ||||||| ||| |    
T  5503575 ctcatttcacacttattaagaaaaagtgtataaatgaa--ggagagaaaaatggttttaggtacccttatcaactattggtgcattcttctttatcatta 5503478  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || ||||||| ||||| ||||||||    
T  5503477 attcaaagtataatatattgaattg 5503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 29225322 - 29225489
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta---taagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||| ||||| ||||||| ||| |||  |||||||||||||||||| |||||||||||||||||   |||||||||| | |||||||||| |||| | ||    
T  29225322 tactccctccgtcccattataattgagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtg 29225421  T
Q  436 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    ||||| | || |||||||| ||| || |||| |||||||  |||||||||||| ||||||||||||||    
T  29225422 cctttgttaagtattggtgcattcttttttatcataaatggaaagtagaatatattgaattggaagtg 29225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 37925192 - 37925321
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggaga----gaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 467  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    |||||||| |||| | |||  ||||||| |||||||| |||||||||||     
T  37925192 gctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttat 37925291  T
Q  468 cataaatacaaagtagaatatgttgaattg 497  Q
    ||||||| ||||||||||||| ||||||||    
T  37925292 cataaatgcaaagtagaatatattgaattg 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 344 - 497
Target Start/End: Original strand, 40754336 - 40754488
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 443  Q
    ||||| ||||| ||||||||| |  ||  ||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||| | |||| |||||    
T  40754336 cctccgtcccaatttaactgagctcttgactcatttcatacttattaagaaaaagtgtataagtgaaa--gagagagaaatggttttgagtgcccttatc 40754433  T
Q  444 aa-ctattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || ||||||||| ||| ||||||| ||||||| ||||||||||||| || |||||    
T  40754434 aacctattggtgcattcttctttatcataaatgcaaagtagaatatattaaattg 40754488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 372 - 488
Target Start/End: Complemental strand, 16956701 - 16956585
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||| | || |||||| || |||| ||| ||| || |||| ||||    
T  16956701 gctcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcata 16956602  T
Q  472 aatacaaagtagaatat 488  Q
    |||| ||||||||||||    
T  16956601 aatataaagtagaatat 16956585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 34814107 - 34813950
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||| ||||||| ||       
T  34814107 tactccctccgtcccaatttaagtgaattttttgctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgttc 34814009  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || | || |||| ||| |||| || ||| ||||||| ||||||||||||| ||||||||    
T  34814008 ttgttaagtattagtgcatttatcattatcataaatgcaaagtagaatatattgaattg 34813950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 27932746 - 27932908
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttat----taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat 434  Q
    |||| ||||| ||||||||||||| |  | || |||||||||||| ||||    |||| |||||| |||||||||||| ||||||||||||  ||| | |    
T  27932746 tactccctccgtcccattttaactaagtcattggctcatttcacatttatatattaagtaaaagtatataagtgaaagagagagaaaaatgcgtttgagt 27932845  T
Q  435 gcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    | | || ||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  27932846 gtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattg 27932908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 4466072 - 4466235
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||| ||||| ||| || |||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||| ||| | | |||    
T  4466072 tactccctccgtcccaatttaattgagccatttgttcatttcacacttattaagaaaaa-tatattagtgaatgagagagaaaaatgggtttgagtacct 4466170  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| ||||||||||    
T  4466171 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtg 4466235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 345 - 425
Target Start/End: Complemental strand, 26760461 - 26760381
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 425  Q
    |||| |||||||||||| || |||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26760461 ctccgtcccattttaaccgagcctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatg 26760381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 16040237 - 16040104
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||||||||| ||||||||||||| | ||| ||| || | ||||||||||||||||||| || |||| | || |||||||  ||| ||||||| |    
T  16040237 tttgctcatttcacatttattaagaaaaa-tatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatc 16040139  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtg 503  Q
    ||||||  |||||||||||| ||| ||||||||||    
T  16040138 ataaatgtaaagtagaatatattgtattggaagtg 16040104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 400 - 497
Target Start/End: Complemental strand, 31798546 - 31798451
Alignment:
Q  400 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||  ||||||| |||||||| | |||| |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  31798546 gtataagtgaaag--agagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatatattgaattg 31798451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 350 - 497
Target Start/End: Original strand, 3718779 - 3718924
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||| | || ||| ||||||||||| ||||||| |||  || |||| |||    
T  3718779 tcccaatttaagtgaacattttgctcatttcacacttattaagaaaaa-tgtattaatg-aagagagagaaaaatagttttaagtgctcttgtcaagtat 3718876  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    | ||| |||| || ||| |||||||  |||||| ||||| ||||||||    
T  3718877 ttgtgcatttatcattatcataaatgtaaagtataatatattgaattg 3718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 339 - 502
Target Start/End: Original strand, 11425787 - 11425949
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||| ||||| ||| || ||||||||||||||  ||||||||||||| | ||| |||||| | ||||||||||| ||||| | || ||    
T  11425787 tactccctccgtcccaatttaattgagccatttgctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtct 11425885  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 502  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| |||||||||    
T  11425886 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagt 11425949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 344 - 473
Target Start/End: Complemental strand, 14090822 - 14090697
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 443  Q
    ||||| |||||||||||||||||   | |||||||||||||||||||||| ||| |||||||||||||  ||||||||||| |  || | || |||||||    
T  14090822 cctccatcccattttaactgaactcctcgctcatttcacacttattaagacaaaatgtataagtgaaa--gagagaaaaatag--ttgattgtctttatc 14090727  T
Q  444 aactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| ||| || |||| ||||||    
T  14090726 aactattggtgcattcttgtttatcataaa 14090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 36232761 - 36232867
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    ||||||||||||  ||||| |||||||||||| |||| | || ||||  ||| |||||||| ||| ||||||| |||||||| |||||||||||| ||||    
T  36232761 aaaagtgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatataaagtagaatatattga 36232860  T
Q  494 attggaa 500  Q
    |||||||    
T  36232861 attggaa 36232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 2886403 - 2886323
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 419  Q
    |||||||| | ||||||||||| ||| || || |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  2886403 tacttccttcgtcccattttaattgagcccttggctcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 10587533 - 10587656
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||  |||||| || | ||||||| || || |  ||| ||| ||| |||||    
T  10587533 ctcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaaaataattttaagtgtcattatcaatta-tgatacattcttcattatcataa 10587631  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || |||| |||||||| ||||||||    
T  10587632 atgcaaaatagaatatattgaattg 10587656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 353 - 496
Target Start/End: Original strand, 25983565 - 25983702
Alignment:
Q  353 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 452  Q
    ||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||    |||| ||||| ||||||| || | |||| || ||||||    
T  25983565 cattttaactgagtcttttgttcatt-cacacatattaagaaaaagtgtataagtgaa----agagtaaaattgttttaagtgtc-ttattaagtattgg 25983658  T
Q  453 tgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    || |||  | |||| ||||||| |||| ||||||||||||||||    
T  25983659 tgcattcatttttatcataaatgcaaaatagaatatgttgaatt 25983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 375 - 497
Target Start/End: Original strand, 27209921 - 27210042
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||| |||| ||||||||||| |||||||| |||||| |||||||||||| |||| | || ||||  ||| |||||||| ||| ||||||| |||||||    
T  27209921 cattttacacatattaagaaaa-gtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 27210019  T
Q  475 acaaagtagaatatgttgaattg 497  Q
      |||| ||||||| ||||||||    
T  27210020 gtaaaggagaatatattgaattg 27210042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 497
Target Start/End: Original strand, 705303 - 705424
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||| || |||||||||||| ||||||||| |||| || ||||||||| |||| |||| |||||| || |||| ||| ||| ||||||| |||| ||     
T  705303 atttcatacatattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatg 705402  T
Q  476 caaagtagaatatgttgaattg 497  Q
     |||||| ||||| ||||||||    
T  705403 taaagtataatatattgaattg 705424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 338 - 474
Target Start/End: Original strand, 36326122 - 36326257
Alignment:
Q  338 gtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    ||||| ||||| ||||| ||||||||| ||  |||  ||||||||||  |||||||||| |||||||| |||||| ||||||| ||||||||| | || |    
T  36326122 gtactccctccatcccagtttaactgagccagttgaacatttcacacagattaagaaaa-gtgtataaatgaaagagagagaacaatggttttgagtgtc 36326220  T
Q  438 tttatcaactattggtgtatttttctttagcataaat 474  Q
    ||| |||| |||||||| ||| || |||| |||||||    
T  36326221 tttgtcaaatattggtgcattcttgtttatcataaat 36326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 339 - 502
Target Start/End: Original strand, 2219366 - 2219528
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||||  |||| |||||| |||  |||||||||||| |||||| |||  ||||||| |||||| ||||||| |||| |||| | || ||    
T  2219366 tactccctccgtcccagattaattgaaccattttttcatttcacactgattaagtaaat-tgtataaatgaaagagagagaataatgattttgagtgtct 2219464  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 502  Q
    |||| ||  |||| || ||| ||||||| |||||||  |||||| ||||| |||||||||||||    
T  2219465 ttataaaagattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattggaagt 2219528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 374 - 493
Target Start/End: Original strand, 13409730 - 13409849
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||  |||||||||||| | ||||||||||||| |||||||||| ||||||   |  ||||| || ||||| || ||||||||||| ||||||    
T  13409730 tcatttcacatatattaagaaaaaatatataagtgaaaggaagagaaaaatagttttactagtatttattaagtattgatgcatttttctttatcataaa 13409829  T
Q  474 tacaaagtagaatatgttga 493  Q
    ||  | ||||||||| ||||    
T  13409830 tatgaggtagaatatattga 13409849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 375 - 474
Target Start/End: Original strand, 28706577 - 28706675
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    |||||||||| |||||| ||||| ||||||| ||||   ||||||||||||||||| | ||||||| |||| ||||| || ||||||||||| |||||||    
T  28706577 catttcacacatattaaaaaaaa-tgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaat 28706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 504
Target Start/End: Complemental strand, 32348390 - 32348244
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| |||  || | || ||||||| ||    
T  32348390 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtcta 32348292  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||| |  || || |||| |||||| |||||| ||||||||| |||||    
T  32348291 ttttccactatcacaaatgcaaagtggaatatattgaattgggagtga 32348244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 503
Target Start/End: Complemental strand, 14352705 - 14352593
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaa---tggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgt 490  Q
    |||||||||||| |||||  ||||||||||   ||||||| | || |||| |||| |||||||| ||| ||||||| | |||||| |||||||||||| |    
T  14352705 aaaagtgtataaatgaaatagagagaaaaaaaatggttttgagtgtctttgtcaagtattggtgcattcttctttatcgtaaatataaagtagaatatat 14352606  T
Q  491 tgaattggaagtg 503  Q
    |||||||| ||||    
T  14352605 tgaattgggagtg 14352593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 375 - 432
Target Start/End: Complemental strand, 4659585 - 4659529
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  4659585 catttcacacttattaagaaaaa-tgtattagtgaaggggagagaaaaatagttttaa 4659529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 37495963 - 37495861
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| |||||  ||||||||  || |||| |||| ||||||||| |||||||| ||| |||||||  ||||||  |||||||||||| ||||    
T  37495963 aaaagtgtataaatgaaaaagagagaaa--tgattttgaatgtctttatcaagtattggtgcattcttctttattataaatgtaaagtagaatatattga 37495866  T
Q  494 attgg 498  Q
    |||||    
T  37495865 attgg 37495861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 497
Target Start/End: Complemental strand, 27391507 - 27391380
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||| ||| ||||||||||||| |||||| |||||||||||| | |||||||||||| |||||| |||  |||| || |||||||  ||||    ||| |    
T  27391507 tttgttcaattcacacttattacgaaaaa-tgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatttactattatc 27391409  T
Q  469 ataaatacaaagtagaatatgttgaattg 497  Q
    |||||| |||||| |||||| ||||||||    
T  27391408 ataaatgcaaagtggaatatattgaattg 27391380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 34332272 - 34332217
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 423  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  34332272 cttttgttcatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaa 34332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 497
Target Start/End: Complemental strand, 40061961 - 40061842
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    ||||||||||||||| | ||| |||||||| |||   |||||||||||| |||||||||   ||||||| ||||| |  ||||||| ||| ||||||| |    
T  40061961 tttcacacttattaaaagaaa-tgtataagcgaagaagagagaaaaatgattttaaatgttcttatcaagtattgttacatttttcattatcataaatgc 40061863  T
Q  477 aaagtagaatatgttgaattg 497  Q
    ||| |||||||| ||||||||    
T  40061862 aaattagaatatattgaattg 40061842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 40988506 - 40988450
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||    
T  40988506 tcatttcacacatattaagaaaaatagtataagtgaaagagagagacaaatggtttt 40988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 49494114 - 49494173
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  49494114 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaa 49494173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 49945092 - 49944981
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||||||||||||||| |||||||||||| ||||||| ||||   ||||||||||||||||||| |||  || | || |||| ||| ||| |||| || |    
T  49945092 tttgctcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatc 49944994  T
Q  469 ataaatacaaagt 481  Q
    |||||| ||||||    
T  49944993 ataaatgcaaagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 498
Target Start/End: Original strand, 50267391 - 50267514
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||||||||||| ||||||| |||  || | || |||||||| ||| | | ||| ||||||    
T  50267391 tcatttcacacgtattaagaaaaa-tgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccattatcataaa 50267489  T
Q  474 tacaaagtagaatatgttgaattgg 498  Q
    |  |||||  ||||| |||||||||    
T  50267490 tgtaaagtgaaatatattgaattgg 50267514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 51049643 - 51049540
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| | |||| ||||||||||||||||| |||| ||||||||| | || ||| ||| || |||| |||||||  |||||| ||||| ||||    
T  51049643 aaaagtgtataaataaaagagagagaaaaatggttttgaatgtctttatcaagt-ttagtgcattcttttttatcataaatgtaaagtataatatattga 51049545  T
Q  494 attgg 498  Q
    |||||    
T  51049544 attgg 51049540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 7224563 - 7224500
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||||| ||||||||||| |||||| ||||| ||||||||||||||  || |||||||||||||    
T  7224563 cttttgttcatttcacacatattaaaaaaaaatgtataagtgaaagaaagcgaaaaatggtttt 7224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 29051421 - 29051382
Alignment:
Q  301 aatattcaagtcctaaaacgtttaattgcccaaaaaagta 340  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  29051421 aatattcaagtcctaaaacgtttaagtgcccaaaaaagta 29051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 504
Target Start/End: Complemental strand, 29225942 - 29225779
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga-aaaatggttttaaatgcc 437  Q
    |||| ||||| |||||| |||||||| | ||||| | |||| ||||  |||||||||||||||| ||||||||| |||||| ||||| | ||| | || |    
T  29225942 tactccctccgtcccatgttaactgagcattttgttaattttacac--attaagaaaaagtgtacaagtgaaagagagagagaaaataggtttgagtgtc 29225845  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
     || |||| |||||||| |||  |  ||| ||||||| ||||||||||||| ||||||||| |||||    
T  29225844 -ttgtcaagtattggtgcattcattcttatcataaatgcaaagtagaatatattgaattgggagtga 29225779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 414 - 497
Target Start/End: Complemental strand, 33149389 - 33149306
Alignment:
Q  414 gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||||||| ||| | || | |||| || |||||||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  33149389 gagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaattg 33149306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 372 - 488
Target Start/End: Complemental strand, 44580676 - 44580558
Alignment:
Q  372 gctcatttcacacttat--taag--aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 467  Q
    |||||||||||||||||  ||||  ||| || |||||||||||||  |||||||||||| ||  | || | |||||||||||| ||| |||||| ||||     
T  44580676 gctcatttcacacttatattaagtgaaagagagtataagtgaaag--agagaaaaatgggttagagtgaccttatcaactatttgtgcatttttttttat 44580579  T
Q  468 cataaatacaaagtagaatat 488  Q
    ||||||| |||||||||||||    
T  44580578 cataaatgcaaagtagaatat 44580558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 386 - 496
Target Start/End: Original strand, 45889212 - 45889322
Alignment:
Q  386 tattaagaaaaagtgtataagtgaaagg-gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtaga 484  Q
    |||||||| ||| ||||||| ||||||| ||||||||||||||||||| |||  || | |||||||||| |||| | | ||| ||||||| |||||| ||    
T  45889212 tattaagacaaa-tgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggtctattctccattatcataaatgcaaagtgga 45889310  T
Q  485 atatgttgaatt 496  Q
    |||| |||||||    
T  45889311 atatattgaatt 45889322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 50773301 - 50773399
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||   ||| ||| | |||  |||||||||||| ||||||| || | || ||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagagaa---tgggtttgagtgctcttatcaactattagtgtattcttttctatcataaa 50773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 2886262 - 2886204
Alignment:
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||| | ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  2886262 ttatcaactattggagcattcttctttatcataaatgcaaagtagaatatattgaattg 2886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 496
Target Start/End: Original strand, 21304760 - 21304880
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||   ||||||||||| ||||||| |||||| |||| |||| || |||| | || |||| |||| ||||| || ||||||||||| ||||||    
T  21304760 tcatttcacataaattaagaaaaa-tgtataaatgaaagagagataaaattg-ttttgagtgtctttgtcaagtattgatgcatttttctttatcataaa 21304857  T
Q  474 tacaaagtagaatatgttgaatt 496  Q
    || |||||| ||||| |||||||    
T  21304858 tataaagtataatatattgaatt 21304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 488
Target Start/End: Complemental strand, 9590650 - 9590554
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaa--atggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 488  Q
    |||| ||||||| |||||| |||||| ||  |||||||||| ||||||| |||| |||| ||| ||| || |||| |||||||| ||||||||||||    
T  9590650 aaaattgtataaatgaaagagagagataataatggttttaagtgcctttgtcaagtatttgtgcattattatttatcataaatataaagtagaatat 9590554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 40019919 - 40019831
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatt 458  Q
    |||| |||||| ||||| ||||||||||| |||||||||||| | ||||||||||| ||||||| |||  || |||| |||| |||||||    
T  40019919 tttgttcattttacactgattaagaaaaa-tgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtatt 40019831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 32587921 - 32587798
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||||||||||  |||||| ||  ||| | || ||||| || ||||| | ||| |||||    
T  32587921 ctcatttcacacatattaagaaaaa-tgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataa 32587823  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || ||||||  ||||| ||||||||    
T  32587822 atgcaaagtgaaatatattgaattg 32587798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 36467146 - 36467205
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  36467146 gctcatttcacacgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaa 36467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 504
Target Start/End: Complemental strand, 28839499 - 28839365
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||  |||||  |||||||| ||| ||||||| |||| | ||||||||||| |||||||||||  || | || ||||||| |||| | |  || |    
T  28839499 tttgctcaaatcacatatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatgctcttgttaagtattggtctattctccactatc 28839401  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  28839400 ataaatgcaaagtggaatatattgaattgggagtga 28839365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 5040523 - 5040584
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||||||||||||| |||| ||| ||| ||||||| |||| | ||||||||||||||||||    
T  5040523 tttgctcatttcacacatatttagacaaa-tgtataaatgaatgagagagaaaaatggtttta 5040584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 5442495 - 5442438
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||| |||||||| ||| ||||||| |||| | |||||||||||||||||||    
T  5442495 tcatttcacacctattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaa 5442438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 6787403 - 6787342
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||||||||||| |||||||||||| | |||||  ||||| ||||||||||| ||||||||||    
T  6787403 ctcatttcacacgtattaagaaaaa-tatataaacgaaagagagagaaaaatagttttaaatg 6787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 12267605 - 12267707
Alignment:
Q  396 aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaat 495  Q
    ||||||||||   |||| || |||||||| ||||| | ||| ||| |||| |||||||  ||| ||||||| |||||||  |||||||||||| ||||||    
T  12267605 aagtgtataaagaaaagagaaagaaaaatagttttgagtgcatttttcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaat 12267704  T
Q  496 tgg 498  Q
    |||    
T  12267705 tgg 12267707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 25418802 - 25418743
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||||||||||| || |||||||||||| | |||||||||||  ||||||||||| |||||    
T  25418802 tttgctcatttcatacatattaagaaaaattatataagtgaaa--gagagaaaaatagtttt 25418743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 39420750 - 39420692
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaat 424  Q
    |||||| ||||||||| | |||||||||||| |||||||| |||||| |||||||||||    
T  39420750 cttttgttcatttcacgcatattaagaaaaaagtgtataaatgaaagagagagaaaaat 39420692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 422
Target Start/End: Complemental strand, 2571514 - 2571469
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 422  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||||    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagagaaaa 2571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 411
Target Start/End: Original strand, 18186142 - 18186187
Alignment:
Q  366 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 411  Q
    |||||| |||||||||||| |||||||||||| ||||| |||||||    
T  18186142 ccttttactcatttcacacgtattaagaaaaattgtatgagtgaaa 18186187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 504
Target Start/End: Complemental strand, 27831997 - 27831872
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    ||||||||  ||||||||||| ||| || ||||||||  |||||||||| ||||||| |||| || |||| |||||||| |||   | ||| |||||||     
T  27831997 atttcacaaatattaagaaaa-gtgcatgagtgaaag--agagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatg 27831901  T
Q  476 caaagtagaatatgttgaattggaagtga 504  Q
    |||||| ||| || ||||||||| |||||    
T  27831900 caaagtggaagatattgaattgggagtga 27831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 37525195 - 37525134
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    ||||||||||||  |||||||||||| ||||||| ||||  |||||||||||| |||||||||||    
T  37525195 gctcatttcacatgtattaagaaaaa-tgtataaatgaa--ggagagaaaaatagttttaaatgc 37525134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 1e-89; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 18 - 301
Target Start/End: Complemental strand, 1355101 - 1354819
Alignment:
Q  18 tcgatcactcgacaatatctgttttggtagagtaagcatttttaaattttgaatagctttatcactatttcaactatgcaacaatttccttgtgattgtg 117  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  1355101 tcgatcacttcacaatatctgttttggtagagtaagcatttttaaattttgaattgcttcatcactatttcaactatgcaagaatttccttgtgattgtg 1355002  T
Q  118 aagtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttg 217  Q
    |||||| ||||||||| ||  |||||| |||||| | ||| |||||||||   |||||||  ||| |||||| |||||||||||||||||| | ||||||    
T  1355001 aagtcaatgtgttactatttagtttcttaatgtt-agaatgctcaaatttgtgaagttttttagatgtaatttgaaaattcataattagtaattactttg 1354903  T
Q  218 tttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaa 301  Q
    ||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  1354902 tttctgatcattgttatgttaatttctctaaggaccagattgatgaaatcatgaaactgctttaaatttagggtttcctttcaa 1354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 1344462 - 1344744
Alignment:
Q  19 cgatcactcgacaatatctgttttggtagagtaagcatttttaaattttgaatagctttatcactatttcaactatgcaacaatttccttgtgattgtga 118  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1344462 cgatcgctctacaatatctgttttggtagagtaagcatttttaaattttgaattgcttcatcactatttcaactatgcaacaatttccttgtgattgtga 1344561  T
Q  119 agtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagtagtcactttgt 218  Q
    ||||||||||||||| || |||||||||||||||| | |  ||||||||   ||||  || ||| |||||| |||||||||||||||||| |||||||||    
T  1344562 agtcagtgtgttactatttggtttctcaatgttaaaactaatcaaatttttgaagtcctctagatgtaatttgaaaattcataattagtaatcactttgt 1344661  T
Q  219 ttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttagggtgtcctctcaa 301  Q
    || | ||||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||| ||||||||| |||| ||||    
T  1344662 ttctgatcattgttatgttaatttctctaaggaccagattagtgaaggcatgaaactgctttaaatttagggtttcctttcaa 1344744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 14690151 - 14689987
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || |     
T  14690151 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtcc 14690052  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||||||||||||| ||| || |||| ||||||| ||||||||||||| ||||||||| ||||    
T  14690051 ttatcaactattggtgcattcttttttatcataaatgcaaagtagaatatattgaattgggagtg 14689987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 350 - 497
Target Start/End: Original strand, 8394180 - 8394329
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaaggga--gagaaaaatggttttaaatgcctttatcaact 447  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||  ||| ||  ||||||||||  |||||||||  |||||||||    
T  8394180 tcccattttaactgaactcttaactcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaact 8394279  T
Q  448 attggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||| ||| ||||||| ||||||||||||||| ||||| ||||||||    
T  8394280 attggtgcattattctttatcataaatacaaagtaaaatatattgaattg 8394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 33743967 - 33743809
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgct-catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    |||||||||  ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| | ||      
T  33743967 tacttcctcgatcccattttaattgaac-tcttgcttcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgta 33743869  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
     |||||||||||| ||| ||| ||||||| ||||||||||||||||||||| || |||||    
T  33743868 cttatcaactatttgtgcattcttctttatcataaatacaaagtagaatatattaaattg 33743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 14748620 - 14748780
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaa--agggagagaaaaatggttttaaatgc 436  Q
    |||| ||||| ||||||||||||||| || ||  ||||||| ||||||||||||||||||||||||||||||  || |||||||| |||| ||| | |||    
T  14748620 tactccctccgtcccattttaactgagcccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgc 14748719  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
      |||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  14748720 tcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattg 14748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 339 - 474
Target Start/End: Original strand, 32231302 - 32231437
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||| ||| || ||  ||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| | ||||     
T  32231302 tactccctccgtcccattttaattgagcccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaatggttttgagtgccc 32231401  T
Q  439 ttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||||| |||||| ||||||| |||||||    
T  32231402 ttatcaactattgatgtattcttctttatcataaat 32231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 372 - 495
Target Start/End: Original strand, 45420888 - 45421011
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| || |||||| |||| | ||| ||||||| ||||    
T  45420888 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcata 45420987  T
Q  472 aatacaaagtagaatatgttgaat 495  Q
    ||| ||||||| ||||| ||||||    
T  45420988 aatgcaaagtaaaatatattgaat 45421011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 372 - 488
Target Start/End: Original strand, 1494197 - 1494313
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||||||||||| |||| |||||| ||||||| | |||||||||| |||| | |||| ||||||| ||||| || ||| ||||||| ||||    
T  1494197 gctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcata 1494296  T
Q  472 aatacaaagtagaatat 488  Q
    ||| |||||||||||||    
T  1494297 aatgcaaagtagaatat 1494313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 357 - 497
Target Start/End: Original strand, 25174519 - 25174659
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| |||||  ||||||||| | ||||||||||||| ||||||||| |||| |||| || |||| |||| | |||| |||| ||||||||||| |    
T  25174519 ttaactgagcctttgactcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgca 25174618  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || |||||||  |||||| ||||||||||||| ||||||||    
T  25174619 ttattctttattataaatgcaaagtagaatatattgaattg 25174659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 718 - 876
Target Start/End: Original strand, 1344916 - 1345072
Alignment:
Q  718 ttcttagttcaaattcatacttttatttattttgactttttggttgattttagtgtaatattcaatttagataatattgggataatttatttcacttttg 817  Q
    ||||||||| ||||||||| |||||||||| ||| ||||| |||| ||||||||| |||||||||||||||||| || |||||  |||| |||||||||     
T  1344916 ttcttagtt-aaattcatatttttatttatcttggctttt-ggtttattttagtggaatattcaatttagataacatagggatcttttaattcacttttt 1345013  T
Q  818 cccttccatcgtttaagagaatccgagttgaaacctagtcgaaaaaatcattggtcaga 876  Q
    ||| ||||||| |||||| ||||| |||   || ||| ||| || ||||||||||||||    
T  1345014 cccatccatcgattaagaaaatcctagtacgaatctaatcggaataatcattggtcaga 1345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 357 - 503
Target Start/End: Complemental strand, 5392221 - 5392076
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| || |||||||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| ||| ||| |||| |||||||| |    
T  5392221 ttaactgagccatttgctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgca 5392123  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || | |  || ||||||| |||||| |||||| ||||||||| ||||    
T  5392122 ttctccactatcataaatgcaaagtggaatatattgaattgggagtg 5392076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 886397 - 886522
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||  |||||  ||| | || | |||||||||||  ||| ||| ||||||| ||||    
T  886397 gctcatttcacacttattaagaaaaagtgtacaagtgaaagagagagggaaatgagtttgattgtccttatcaactatctgtgcattcttctttatcata 886496  T
Q  472 aatacaaagtagaatatgttgaattg 497  Q
    ||| ||||||||||||| | ||||||    
T  886497 aatgcaaagtagaatatatcgaattg 886522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 350 - 503
Target Start/End: Original strand, 8566041 - 8566191
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    |||||||||||||||  | ||  |||||||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | |||| |||||||||||    
T  8566041 tcccattttaactgagtcattgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaatgtgtttgagtgcccttatcaactat 8566140  T
Q  450 tggtg--tatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || ||  | |||||||||| |||||||     | ||||||| ||||||||||||||    
T  8566141 tgatgcatttttttctttatcataaat-----gcagaatatattgaattggaagtg 8566191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 377 - 504
Target Start/End: Complemental strand, 2195620 - 2195494
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| | || | || | || |||||||| ||| ||  ||| ||||||| |    
T  2195620 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgttaagtattggtgcattctttcttatcataaatgc 2195522  T
Q  477 aaagtagaatatgttgaattggaagtga 504  Q
    |||||||||||| ||||||||| |||||    
T  2195521 aaagtagaatatattgaattgggagtga 2195494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 350 - 497
Target Start/End: Complemental strand, 39998342 - 39998196
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||| ||||| ||| || ||| ||||||||| || ||||||||||| | |||||| |||||| |||||||||||| |||||| || ||||||||| |||    
T  39998342 tcccagtttaattgagccattttctcatttcatacatattaagaaaa-gagtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtat 39998244  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    | | | ||| ||||||| |||||||  |||||||||||| ||||||||    
T  39998243 ttgagcattcttctttatcataaatgtaaagtagaatatattgaattg 39998196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 369 - 504
Target Start/End: Original strand, 42412330 - 42412464
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||||||||||||||| |||||||||||| |||||||||||| | ||||||||||| ||||||| |||  || |||  |||||||| ||| | | ||| |    
T  42412330 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattctccattatc 42412428  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  42412429 ataaatgcaaagtggaatatattgaattgggagtga 42412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 10043455 - 10043378
Alignment:
Q  211 cactttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatgaaactgctttagatttag 288  Q
    |||||||||| | |||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  10043455 cactttgtttctgatcactgttatgttaatttctctaaggaccagattgataaaataatgaaactgctttaaatttag 10043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 375 - 496
Target Start/End: Complemental strand, 29638455 - 29638335
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| |||||||| ||||||  |||||||||||||||| ||||||||| |||| |||||||  ||| ||||||| |||||||    
T  29638455 catttcacacagattaagaaaa-gtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaat 29638357  T
Q  475 acaaagtagaatatgttgaatt 496  Q
      |||||| ||||| |||||||    
T  29638356 gtaaagtataatatattgaatt 29638335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 394 - 502
Target Start/End: Complemental strand, 14117598 - 14117490
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    ||||||||||||  ||||| ||||||||| | ||||| | ||||||| |||| |||||||||||| ||||||| |||||||  ||||| |||||| ||||    
T  14117598 aaaagtgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaatatattga 14117499  T
Q  494 attggaagt 502  Q
    |||| ||||    
T  14117498 attgaaagt 14117490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 29451540 - 29451382
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa---gtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||    ||||||| |||||  ||||||||||| ||||| ||      
T  29451540 tacttcctccatcccattttaaccgaaccttttgttcatttcacacatattaagaaaaaatgatgtataaatgaaa--gagagaaaaatagttttgaa-c 29451444  T
Q  436 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
      ||| |||| |||| ||||||| ||  ||| ||||||| ||||||| ||||| ||||||||    
T  29451443 attttgtcaagtattagtgtattctttcttatcataaatccaaagtataatatattgaattg 29451382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 498
Target Start/End: Complemental strand, 28791462 - 28791340
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| |||| |||||||| ||| ||||||| |||||||    
T  28791462 catttcacacagattaagaaaa-gtgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 28791364  T
Q  475 acaaagtagaatatgttgaattgg 498  Q
      ||| |||||||| |||||||||    
T  28791363 gtaaactagaatatattgaattgg 28791340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 377 - 496
Target Start/End: Original strand, 40077705 - 40077823
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||| | ||||||||||| |||||||| |||||| |||| ||||||| |||| | || |||| |||| |||||||| ||| ||||||| |||||||      
T  40077705 tttcactcatattaagaaaa-gtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgt 40077803  T
Q  477 aaagtagaatatgttgaatt 496  Q
    |||||||||||| |||||||    
T  40077804 aaagtagaatatattgaatt 40077823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 497
Target Start/End: Original strand, 27868271 - 27868399
Alignment:
Q  368 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 467  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||  ||   || |||| ||||| |  |||| || |||     
T  27868271 ttttgctcatttcacacttattaagaaaaa-tgtattagtgaatgatggagaaaaatggttttacgtgttcttgtcaagtattgatccatttatcattat 27868369  T
Q  468 cataaatacaaagtagaatatgttgaattg 497  Q
    ||||||| ||||||||||||| ||||||||    
T  27868370 cataaatgcaaagtagaatatattgaattg 27868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 498
Target Start/End: Original strand, 27973609 - 27973761
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 444  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||| ||   || |||    
T  27973609 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaagtgttcttgtca 27973707  T
Q  445 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    | ||||| |  ||||  | ||| ||||||| ||||||||||||  |||||||||    
T  27973708 agtattgatccatttaccattatcataaatgcaaagtagaatacattgaattgg 27973761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 498
Target Start/End: Original strand, 28030878 - 28031030
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 444  Q
    |||| ||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||| |   ||||||||||||||||| ||   || |||    
T  28030878 ctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa-tgtattagtgaaggatggagaaaaatggttttaagtgttcttgtca 28030976  T
Q  445 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    | ||||| |  ||||  | ||| ||||||| ||||||||||||  |||||||||    
T  28030977 agtattgatccatttaccattatcataaatgcaaagtagaatacattgaattgg 28031030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 373 - 488
Target Start/End: Original strand, 9734119 - 9734232
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||| ||||||| ||||| ||||||| ||||||  |||||||||||| ||| | |    |||||||||||||||| ||| ||||||| |||||    
T  9734119 ctcatttcacatttattaaaaaaaaatgtataaatgaaag--agagaaaaatggatttgagtattcttatcaactattggtgcattcttctttatcataa 9734216  T
Q  473 atacaaagtagaatat 488  Q
    || ||||||| |||||    
T  9734217 atgcaaagtaaaatat 9734232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 339 - 430
Target Start/End: Complemental strand, 2797230 - 2797139
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||| ||||| ||| ||| ||| ||| | ||||| ||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||    
T  2797230 tactccctccgtccaattataaatgagctttttgttcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaaaatggtttt 2797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 369 - 504
Target Start/End: Original strand, 7258314 - 7258448
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||||| |||||||||||||||| ||||| | ||| | |||| |  ||||||||||||||||||  ||  || |||| |||||||| |||| || ||| |    
T  7258314 tttgcttatttcacacttattaaaaaaaa-tatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcatttatcattatc 7258412  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||| |||| |||||||| ||||||||| |||||    
T  7258413 ataaatgcaaactagaatatattgaattgggagtga 7258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 8840514 - 8840445
Alignment:
Q  342 ttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 412  Q
    ||||||| ||||||| ||| ||| ||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  8840514 ttcctccgtcccattataagtgagccttttg-tcatttcacacatattaagaaaaattgtataagtgaaag 8840445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 496
Target Start/End: Original strand, 15559086 - 15559203
Alignment:
Q  378 ttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaataca 477  Q
    |||||| ||||||||||||| ||||| |||||| | |||| ||||||| |||||| ||   || |||| |||||||||||||  | ||| ||||||| ||    
T  15559086 ttcacatttattaagaaaaa-tgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgca 15559184  T
Q  478 aagtagaatatgttgaatt 496  Q
    ||||||||||| |||||||    
T  15559185 aagtagaatatattgaatt 15559203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 349 - 503
Target Start/End: Complemental strand, 37459521 - 37459377
Alignment:
Q  349 ctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaacta 448  Q
    |||||||||||||| |  | || ||||||||||||||||||||| |||||||||||| |||||  |||| |||||||       |||  || ||||||||    
T  37459521 ctcccattttaactaagtcattggctcatttcacacttattaag-aaaagtgtataaatgaaaaagagaaaaaaatg-------atg--ttgatcaacta 37459432  T
Q  449 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    ||| |||||| ||||||| ||||||| |||||| |||||| || |||||| ||||    
T  37459431 ttgatgtattcttctttatcataaatgcaaagttgaatatattaaattgggagtg 37459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 334 - 498
Target Start/End: Complemental strand, 41726714 - 41726553
Alignment:
Q  334 aaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaa 433  Q
    |||| |||| ||||| ||||| |||||||||||   ||   ||||||||||  ||||||||||| |||||||  |||||  ||||||| || ||||| |     
T  41726714 aaaattactccctccgtcccagtttaactgaactaattttccatttcacacagattaagaaaaa-tgtataaaagaaag--agagaaatatagttttgag 41726618  T
Q  434 tgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    ||||||| |||| ||||| || ||| ||||||| |||||||  |||||||||||| |||||||||    
T  41726617 tgcctttttcaagtattgttgcattcttctttatcataaatgtaaagtagaatatattgaattgg 41726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 36011909 - 36012001
Alignment:
Q  339 tacttcctccctcccattttaactgaac-cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||||||||| ||||||||||| | ||  |||||| ||||||||||  | ||||||||| ||||||||||||||| || ||| ||||||||||    
T  36011909 tacttcctccgtcccattttaagtcaagtcttttgttcatttcacatatgttaagaaaatgtgtataagtgaaagagaaagagaaatggtttt 36012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 596 - 643
Target Start/End: Original strand, 1354159 - 1354206
Alignment:
Q  596 tttgcagccattcaaagttgcattagaaaaaggaaccaaattgttctg 643  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  1354159 tttgcagccattcaaagttgcataagaaaaatgaaccaaattgatctg 1354206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 445
Target Start/End: Original strand, 325028 - 325105
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaa 445  Q
    |||||| |||||||| || |||||||| ||| ||||||||||||| ||| |||||||||||||| | ||||||| ||||    
T  325028 cttttgttcatttcaaacatattaagacaaa-tgtataagtgaaaaggaaagaaaaatggttttgattgcctttgtcaa 325105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 498
Target Start/End: Complemental strand, 29615955 - 29615830
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||| |||||||||||| ||||||| |||| | |||||||||||  ||||||||||  || | || |||||||||| ||| |  |  ||||    
T  29615955 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaataattttaaatgcacttgttaagtattggtgtactttccactgtcata 29615857  T
Q  472 aatacaaagtagaatatgttgaattgg 498  Q
    |||  ||||| |||||| |||||||||    
T  29615856 aatgtaaagtggaatatattgaattgg 29615830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 498
Target Start/End: Original strand, 41759607 - 41759705
Alignment:
Q  400 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    ||||| ||||||| |||| |||||||  ||| | || | || |||| |||||||| ||| ||||||| ||||||||||||||| ||||| |||||||||    
T  41759607 gtatatgtgaaagagagaaaaaaatgagtttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagtaaaatatattgaattgg 41759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 2875005 - 2875094
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtt 428  Q
    |||| ||||| ||||||| ||| | | | ||||| ||||||||||  ||||||||||| ||| |||||||||||  ||||||||||||||    
T  2875005 tactccctccgtcccattataaataagctttttgttcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaaaatggtt 2875094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 497
Target Start/End: Original strand, 5423122 - 5423238
Alignment:
Q  380 cacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaa 479  Q
    ||||| |||||||| ||| || ||||||||||| |||||||||||| |||| | || | || ||||  ||||||||||||  | ||| ||||||||||||    
T  5423122 cacacatattaagataaa-tgcataagtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaa 5423220  T
Q  480 gtagaatatgttgaattg 497  Q
    || ||| || ||||||||    
T  5423221 gtggaagatattgaattg 5423238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 488
Target Start/End: Complemental strand, 26677227 - 26677115
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg-gttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||  ||||||| || | || | || |||||||| |||   | ||| |||||||    
T  26677227 atttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaat 26677129  T
Q  475 acaaagtagaatat 488  Q
     |||||||||||||    
T  26677128 gcaaagtagaatat 26677115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 139178 - 139055
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    |||||||||||| |||||||||||| ||||||| |||| | |||| ||||||| |||||||| |  || | || |||||||| ||||| |  || |||||    
T  139178 ctcatttcacacatattaagaaaaa-tgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcattttccgctatcataa 139080  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || |||||| ||||||  |||||||    
T  139079 atgcaaagtggaatataatgaattg 139055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 362 - 497
Target Start/End: Complemental strand, 11637308 - 11637173
Alignment:
Q  362 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaa-agggagagaaaaatggttttaaatgcctttatcaactattggtgtatttt 460  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||| ||    ||||||||||| ||||| | || ||||  ||| ||||| |  ||| |    
T  11637308 tgaacattttgttcatgtcacacatattaagaaaaagtgtataagtaaattaagagagaaaaat-gttttgagtgtctttgccaagtattgatacattat 11637210  T
Q  461 tctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||| |||||||  |||||||||||| ||||||||    
T  11637209 tctttatcataaatgtaaagtagaatatattgaattg 11637173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 37703147 - 37703085
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||  |||||||||||| ||||||    
T  37703147 tttgatcatttcacacatattaagaaaaa-tgtataagcgaaaaagagagaaaaatgattttaa 37703085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 5878196 - 5878300
Alignment:
Q  394 aaaagtgtataagtgaaagggaga--gaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgtt 491  Q
    |||||||||||| |||||| ||||  |||||||||||||||||| |||| |||| |||| ||  ||| | | ||| |||||||  |||||||||||| ||    
T  5878196 aaaagtgtataaatgaaagagagagagaaaaatggttttaaatgtctttgtcaagtattagttcattctac-ttatcataaatgtaaagtagaatatatt 5878294  T
Q  492 gaattg 497  Q
    ||||||    
T  5878295 gaattg 5878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 372 - 454
Target Start/End: Complemental strand, 12653844 - 12653763
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtg 454  Q
    ||||||||||||| |||||||||||| ||||||| ||||   ||||||||||| ||||||| ||| ||| | || ||||||||    
T  12653844 gctcatttcacacgtattaagaaaaa-tgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtg 12653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 379 - 497
Target Start/End: Complemental strand, 28802917 - 28802800
Alignment:
Q  379 tcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaa 478  Q
    |||||| |||||||| ||| ||||||| |||||| ||||||||||||||||||| |||  || | || ||||| | |||| | |  || ||||||| |||    
T  28802917 tcacacgtattaagacaaa-tgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatctattctccactatcataaatgcaa 28802819  T
Q  479 agtagaatatgttgaattg 497  Q
    ||| |||||| ||||||||    
T  28802818 agtggaatatattgaattg 28802800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 2e-42; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 28330985 - 28330821
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||     
T  28330985 tactccctccgtcccattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgccc 28330886  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||| ||| ||| ||||||||| ||||    
T  28330885 ttatcaactattggtgcattcttctttatcataaatgcaaagcagattatattgaattgggagtg 28330821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 350 - 498
Target Start/End: Complemental strand, 8759959 - 8759811
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    |||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||| ||| | | |  |||||||||||    
T  8759959 tcccattttaaccgaaccttttactcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaaaatgggtttcagttcacttatcaactat 8759860  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    || || ||||||||||| ||||||| ||||||||||||| |||||||||    
T  8759859 tgatgcatttttctttatcataaatgcaaagtagaatatattgaattgg 8759811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 20964204 - 20964368
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||   || ||    
T  20964204 tactccctccgtcccattttaactgagctcttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtct 20964303  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||||||||||||| ||| ||||||| | ||||| ||||||||||||| | ||||||||||||    
T  20964304 ttatcaactattggtgcattcttctttatcgtaaatgcaaagtagaatatatcgaattggaagtg 20964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 37315838 - 37316002
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    |||| ||||| |||| |||||| |||  |||| |||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||  |||||    
T  37315838 tactccctccgtcccgttttaattgagactttggctcatttaacacttattaagaaaaaagtg-ataagtgaaagagagagaaaaatggttttggatgcc 37315936  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
     |||| ||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  37315937 cttattaactattagtgcatttttctttatcataaatgcaaagtagaatatgttgaattgggagtg 37316002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 376 - 497
Target Start/End: Complemental strand, 38320065 - 38319944
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| | |||| |||||||||||||||| ||| ||||||| |||||||     
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  476 caaagtagaatatgttgaattg 497  Q
    ||||||||||||| ||||||||    
T  38319965 caaagtagaatatattgaattg 38319944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 350 - 497
Target Start/End: Original strand, 32949775 - 32949923
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatgg-ttttaaatgcctttatcaacta 448  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| |||||  || |||||||||| |||| | || ||||||||||||    
T  32949775 tcccattttaactgagcctttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaaaatggtttttgagtgtctttatcaacta 32949874  T
Q  449 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||| ||||||||||| |||||||  |||||||||||| ||||||||    
T  32949875 ttggtgcatttttctttatcataaatgtaaagtagaatatattgaattg 32949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 373 - 503
Target Start/End: Complemental strand, 42132972 - 42132840
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaat--gcctttatcaactattggtgtatttttctttagcat 470  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |  ||| |||| |||||||| || ||| ||||||| |||    
T  42132972 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttctttatcat 42132873  T
Q  471 aaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||| ||||||||||||| ||||||||||||||    
T  42132872 aaatgcaaagtagaatatattgaattggaagtg 42132840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 49218732 - 49218856
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | |||| |||||| ||||||||| | || |||||| ||||    
T  49218732 gctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggttagagtgcccttatcagctattggtgca-ttctctttatcata 49218830  T
Q  472 aatacaaagtagaatatgttgaattg 497  Q
    ||| ||||||| ||||| ||||||||    
T  49218831 aattcaaagtataatatattgaattg 49218856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 53848823 - 53848679
Alignment:
Q  353 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 452  Q
    |||||||| ||| | ||| | |||||||||  |||||||||||||||||||||||| ||| |||| ||||||| |||| | |||| ||||||||||||||    
T  53848823 cattttaattgagcttttggttcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattgg 53848724  T
Q  453 tgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || ||| || |||| ||||||| ||||||||||||| ||||||||    
T  53848723 tgcattattatttatcataaatgcaaagtagaatatattgaattg 53848679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 48400582 - 48400705
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||  ||||||||||| ||||||| |||||| |||||||||||| |||| ||||| |||||||| ||||| |||||| ||||||| |||||    
T  48400582 ctcatttcacacagattaagaaaaa-tgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataa 48400680  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    ||  |||||||||||| ||||||||    
T  48400681 atgtaaagtagaatatattgaattg 48400705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 22020462 - 22020584
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||| ||||||||||| | | ||||| ||||||||| ||  ||||||| ||| |||||    
T  22020462 ctcatttcacacttattaagaaaaagtgtataaatgagagtgagag-aaaatggttttgagttcctttgtcaactatttgtacatttttc-ttatcataa 22020559  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || ||||||||||||| ||||||||    
T  22020560 atgcaaagtagaatatattgaattg 22020584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 339 - 500
Target Start/End: Original strand, 25902378 - 25902539
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||||||||| ||||||  ||||||| | |||| |||||||||||| ||||||||||||||||||||||||||| |  || ||||||||||| | ||  |    
T  25902378 tacttcctccgtcccataataactgagcattttcctcatttcacacatattaagaaaaagtgtataagtgaaagaggaagtaaaatggttttgagtgttt 25902477  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaa 500  Q
    || | || |||| ||| ||| ||||||   ||||||| ||||| |||||| |||||||||||    
T  25902478 ttgttaagtattagtgcattcttctttgttataaatataaagttgaatatattgaattggaa 25902539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 5499349 - 5499440
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    |||| ||||| |||||||||||| || ||||||| |||||| |||| ||||||||||||||||||||||||||| || |||||||| |||||    
T  5499349 tactccctccgtcccattttaaccgagccttttgttcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaaaatagtttt 5499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 54217562 - 54217441
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagag--aaaaatggttttaaatgc 436  Q
    |||| ||||| |||||||||||| |  |||||  ||||||||| |||||||||||||||||||||||||||||| |||||  |||||||| ||| | | |    
T  54217562 tactccctccgtcccattttaacggggcctttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaaaatgggtttgagtac 54217463  T
Q  437 ctttatcaactattggtgtatt 458  Q
    | || |||||||||||||||||    
T  54217462 ccttgtcaactattggtgtatt 54217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 22872303 - 22872462
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg--c 436  Q
    |||| ||||| |||||  |||| ||| || |||||||||||||||| |||||||||||| ||||||||||||   ||||||||||||||||||| ||  |    
T  22872303 tactccctccgtcccaaattaagtgagccatttgctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggttttaagtgctc 22872401  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
     ||| |||| |||||||| ||| | | ||| ||||||| |||||| |||||| ||||||||    
T  22872402 gtttgtcaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaattg 22872462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 42051627 - 42051736
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| |||||| || |||||||||||||| | || ||||| ||| |||||||| ||| ||||||| |||||||  ||||||||||||  |||    
T  42051627 aaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaatataatga 42051726  T
Q  494 attggaagtg 503  Q
    ||||||||||    
T  42051727 attggaagtg 42051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 353 - 424
Target Start/End: Original strand, 18872585 - 18872656
Alignment:
Q  353 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 424  Q
    |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  18872585 cattttaagtgaacattttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaat 18872656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 366 - 497
Target Start/End: Original strand, 47277625 - 47277756
Alignment:
Q  366 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttt 465  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||  ||| ||||||  |||| |||||| || |||  |||| ||  ||||||||||    
T  47277625 ccttttgctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttcttt 47277724  T
Q  466 agcataaatacaaagtagaatatgttgaattg 497  Q
    | |||||||  |||||| ||||| ||||||||    
T  47277725 atcataaatgtaaagtaaaatatattgaattg 47277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 497
Target Start/End: Original strand, 4360343 - 4360482
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| || |||| ||||||||||| ||||||||||||  |||||| |||| |  |||||||||||||||||| ||| ||| | || |||||||| |    
T  4360343 ttaactgagccatttgttcatttcacacatattaagaaaaaa-gtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgca 4360441  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || | |  |||||||||| |||||| |||||| ||||||||    
T  4360442 ttctccactagcataaatgcaaagtggaatatattgaattg 4360482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 41594764 - 41594864
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||| |||  || ||||||| ||||||||||  |||| ||||||||||| |||||||||| ||||||||||||||||| | |||||    
T  41594764 tactccctccgtcccattataagcgagccttttgttcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaatggttttgagtgcct 41594863  T
Q  439 t 439  Q
    |    
T  41594864 t 41594864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 504
Target Start/End: Complemental strand, 33047664 - 33047518
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| || || ||||||||||||| |||||||||||| |||||||   ||   ||||||||||||||||||| ||| ||| | || |||||||  |    
T  33047664 ttaactgagccattagctcatttcacacctattaagaaaaa-tgtataaacaaagaagagagaaaaatggttttaagtgcttttgttaagtattggtaga 33047566  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    || | |  || |||||||||||||| |||||| |||||||||||||||    
T  33047565 ttctccactatcataaatacaaagtggaatatattgaattggaagtga 33047518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 374 - 497
Target Start/End: Original strand, 34790903 - 34791026
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||| ||||| ||||||||||| |||||||| |||||| |||||||||||| |||| | ||| |||||||| |||| ||| ||| ||||||| ||||||    
T  34790903 tcattgcacacatattaagaaaa-gtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaa 34791001  T
Q  474 --tacaaagtagaatatgttgaattg 497  Q
      || |||||||||||| ||||||||    
T  34791002 agta-aaagtagaatatattgaattg 34791026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 497
Target Start/End: Original strand, 39052835 - 39052975
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 455  Q
    ||||| |||||  ||| ||||||||||||  ||||||||||| ||||||| |||||| || | ||||| |  ||| | || ||||||||| ||||||||     
T  39052835 tttaattgaacaattttctcatttcacacagattaagaaaaa-tgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgc 39052933  T
Q  456 atttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||| ||||||| |||||||  |||||||||||| ||||||||    
T  39052934 attcttctttatcataaatgtaaagtagaatatattgaattg 39052975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 337 - 501
Target Start/End: Complemental strand, 28280029 - 28279866
Alignment:
Q  337 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    |||||||||||| ||||| ||||||||| ||  ||   |||||||||   ||||||||||| |||||||   |||| || ||| |||| ||||| | ||     
T  28280029 agtacttcctccgtcccagtttaactgagccaattttccatttcacagagattaagaaaaa-tgtataaagaaaagagaaagagaaatagttttgagtgt 28279931  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaag 501  Q
    |||| | || |||||||| ||||||||||| |||||||| |||||||||||| || |||||||||    
T  28279930 ctttgttaagtattggtgcatttttctttatcataaatataaagtagaatatatttaattggaag 28279866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 377 - 497
Target Start/End: Complemental strand, 41436633 - 41436514
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| ||||||||||| |||||||||||| || |||| |||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  41436633 tttcacacatattaagaaaa-gtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 41436535  T
Q  477 aaagtagaatatgttgaattg 497  Q
    |||||||||||| ||||||||    
T  41436534 aaagtagaatattttgaattg 41436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 46958904 - 46958828
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 421  Q
    |||| |||| ||||||||||   ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||    
T  46958904 ctccgtccccttttaactgagtattttgttcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaa 46958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 8295201 - 8295127
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||| || ||||||||||||||||  ||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  8295201 ttaactgagccatttgctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaaaattgttttaa 8295127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 375 - 498
Target Start/End: Original strand, 29550680 - 29550802
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  ||||||||||| |||||||  ||||| ||||||||||| ||||| | ||||||| | || ||||| ||| |  ||||||| |||||||    
T  29550680 catttcacacagattaagaaaaa-tgtataaaggaaagagagagaaaaatagttttgagtgccttttttaagtattgatgtttcattctttatcataaat 29550778  T
Q  475 acaaagtagaatatgttgaattgg 498  Q
      |||||||||||| |||||||||    
T  29550779 gtaaagtagaatatattgaattgg 29550802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 369 - 504
Target Start/End: Complemental strand, 41203897 - 41203763
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||| |||||||| |||||||||||| ||||||| |||| | || |||||||||||||| | |||  || | || ||||| || ||| |||  || |    
T  41203897 tttgctcgtttcacacgtattaagaaaaa-tgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactacc 41203799  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    ||||||||||||| |||||| |||||||| ||||||    
T  41203798 ataaatacaaagtggaatatattgaattgaaagtga 41203763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 366 - 411
Target Start/End: Original strand, 36045994 - 36046039
Alignment:
Q  366 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaa 411  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36045994 cctttggctcatttcacacttattaagaaaaagtgtataagagaaa 36046039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 497
Target Start/End: Complemental strand, 49448999 - 49448874
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||| ||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||| |||  || |||| |||| ||| ||| |   ||| |    
T  49448999 tttgttcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatc 49448903  T
Q  469 ataaatacaaagtagaatatgttgaattg 497  Q
    |||||| ||||||| ||||| ||||||||    
T  49448902 ataaatgcaaagtataatatattgaattg 49448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 13530017 - 13529961
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  13530017 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 13529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 357 - 504
Target Start/End: Original strand, 42024136 - 42024282
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||| || ||||||||  |||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| | |  || | || ||||||| ||    
T  42024136 ttaactgagccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaactactcttgttaagtattggtcta 42024234  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    || | |  ||  |||||| |||||| |||||| |||||||||||||||    
T  42024235 ttctccactattataaatgcaaagtggaatatattgaattggaagtga 42024282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 497
Target Start/End: Original strand, 36047116 - 36047174
Alignment:
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  36047116 ttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattg 36047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 11583647 - 11583704
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 402  Q
    |||| |||||||||| |||| ||||| |||||||||||| ||||||||||||| ||||    
T  11583647 ctccgtcccattttagctgagcctttggctcatttcacatttattaagaaaaaatgta 11583704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 504
Target Start/End: Original strand, 40020892 - 40021029
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaa-gtgta-taagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    |||| ||||||||||| |||||||||||| || || |||||||| | ||||||||||||||||| ||||  ||| |||| |||||||| ||||  | |||    
T  40020892 tttggtcatttcacacatattaagaaaaatgtatactaagtgaatgagagagaaaaatggttttgaatgtttttgtcaagtattggtgcatttaccatta 40020991  T
Q  467 gcataaatacaaagtagaatatgttgaattggaagtga 504  Q
     |||| || ||||  ||||||| || |||||| |||||    
T  40020992 tcatagatgcaaaaaagaatatattaaattgggagtga 40021029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 425
Target Start/End: Complemental strand, 12619847 - 12619792
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatg 425  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| | ||||||||||    
T  12619847 tttgttcatttcatacttattaagaaaaa-tgtataagtgaaagagcgagaaaaatg 12619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 497
Target Start/End: Complemental strand, 17237203 - 17237076
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    |||||||||||||||| |||||||||||| | ||||| |||| | ||||||||||| ||||||| ||  ||| | || |||| ||| ||| ||   || |    
T  17237203 tttgctcatttcacacctattaagaaaaa-tatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattctttactatc 17237105  T
Q  469 ataaatacaaagtagaatatgttgaattg 497  Q
    |||||| |||||| |||||| ||||||||    
T  17237104 ataaatgcaaagtggaatatattgaattg 17237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 497
Target Start/End: Original strand, 38160099 - 38160226
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||||| | |  |||||||||||| ||||||| | || | ||||||||||| ||||||| || |||| |||| ||||| || ||| | | ||| |    
T  38160099 tttgctcattttatatatattaagaaaaa-tgtataaataaaggagagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatc 38160197  T
Q  469 ataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||  ||||| ||||||||    
T  38160198 ataaatacaaagtgaaatatattgaattg 38160226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 498
Target Start/End: Original strand, 10099749 - 10099800
Alignment:
Q  447 tattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    |||||||| ||||||||||| |||||||  |||||||||||| |||||||||    
T  10099749 tattggtgcatttttctttatcataaatttaaagtagaatatattgaattgg 10099800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 504
Target Start/End: Original strand, 35027420 - 35027578
Alignment:
Q  345 ctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatca 444  Q
    |||| ||| |||||||||||   ||||| | ||||||||| |||||| ||||||||||||| |||||  | |||||||||  ||||||||| | || |||    
T  35027420 ctccatcctattttaactgagtattttgtttatttcacacatattaaaaaaaagtgtataattgaaaaagggagaaaaataattttaaatgtc-ttgtca 35027518  T
Q  445 actattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    | |||||||| |||| |  ||| ||||||  ||||||  ||||| || ||||| ||||||    
T  35027519 aatattggtgcatttattattatcataaacgcaaagttaaatatattaaattgaaagtga 35027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 35998088 - 35998191
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| |||||| ||  |||||||  |||| | || ||||||||| |||||||  ||| ||||||| |||||||  |||||| ||||| ||||    
T  35998088 aaaagtgtataaatgaaagcgaacgaaaaataattttgagtgtctttatcaagtattggtacattcttctttatcataaatgtaaagtaaaatatattga 35998187  T
Q  494 attg 497  Q
    ||||    
T  35998188 attg 35998191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 504
Target Start/End: Original strand, 41710091 - 41710225
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||  |||||| |||||||| ||| ||||||| ||||   |||| |||||||||||||| |||  || | || ||||||| |||||| |  || |    
T  41710091 tttgctcaaatcacacatattaagacaaa-tgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtctattttccactatc 41710189  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  41710190 ataaatgcaaagtggaatatattgaattgggagtga 41710225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 374 - 412
Target Start/End: Complemental strand, 1920884 - 1920846
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaag 412  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  1920884 tcatttcacacatattaagaaaaaatgtataagtgaaag 1920846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 377 - 502
Target Start/End: Complemental strand, 25149604 - 25149479
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttc-tttagcataaata 475  Q
    ||||||||  |||||||||| ||||||||   |||| ||||||||||| ||||| | ||||||| | || |||||||| |||  || |||| |||||||     
T  25149604 tttcacacagattaagaaaa-gtgtataacgaaaagagagagaaaaatagttttgagtgccttttttaagtattggtgcattcctcttttatcataaatg 25149506  T
Q  476 caaagtagaatatgttgaattggaagt 502  Q
     ||||| |||||| |||||||||||||    
T  25149505 taaagtggaatatattgaattggaagt 25149479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 497
Target Start/End: Original strand, 54729434 - 54729558
Alignment:
Q  376 atttcacacttattaagaaa---aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||| ||||||||||   || ||||||| |||||| ||||||||||| ||||||| ||  ||| | || |||| ||||||| | |  || |||||    
T  54729434 atttcacacatattaagaaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataa 54729533  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || |||||| |||||| ||||||||    
T  54729534 atgcaaagtggaatatattgaattg 54729558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 13719912 - 13719811
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 492  Q
    ||||||||||||| |||||| || |||||||||| ||| | || |||| | || || || |||||| ||||||| |||||||  |||||| ||||| |||    
T  13719912 aaaaagtgtataaatgaaagagaaagaaaaatgggtttgagtgtctttgttaagtaatgatgtattattctttatcataaatgtaaagtataatatattg 13719813  T
Q  493 aa 494  Q
    ||    
T  13719812 aa 13719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 49306718 - 49306621
Alignment:
Q  399 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    ||||||| |||||| ||||||||||||||||||| |||  || | || ||||||| |||| | |  || ||||||| |||||| |||||| |||||||    
T  49306718 tgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaagtggaatatattgaatt 49306621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 500
Target Start/End: Complemental strand, 49401798 - 49401686
Alignment:
Q  387 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaat 486  Q
    ||||||||||| |||||||   |||| ||||||||||| ||||| |||| | || |||| ||||| |  ||| |||||||  ||||||  ||||||||||    
T  49401798 attaagaaaaa-tgtataaagtaaagagagagaaaaatagttttgaatgtccttttcaagtattgatacattgttctttattataaatgtaaagtagaat 49401700  T
Q  487 atgttgaattggaa 500  Q
    || |||||||||||    
T  49401699 atattgaattggaa 49401686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 13222259 - 13222095
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||||||||||| || || ||  || |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| | ||||     
T  13222259 tactccctccgtcccattttaaccgagccattgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgccc 13222160  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  13222159 ttatcaactattggtgtattcttctttatcataaatgcaaagtaaaatatattgaattggaagtg 13222095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 339 - 502
Target Start/End: Complemental strand, 314618 - 314455
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||     
T  314618 tactccctccgtcccattttaactgagcgattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgccc 314519  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 502  Q
    ||||||||||||| || ||| ||||||| ||||||| ||||||||||||| |||||||| ||||    
T  314518 ttatcaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgaaagt 314455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 344 - 497
Target Start/End: Original strand, 6972462 - 6972614
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatc 443  Q
    ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| | |||| |||||    
T  6972462 cctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagag-aaaatggttttgagtgcccttatc 6972560  T
Q  444 aactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||| ||| ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  6972561 aactatttgtgcattcttctttatcataaatgcaaagtagaatatattgaattg 6972614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 4282934 - 4283093
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaa-agtgtataagtgaaagggagagaaaaatggttttaaatgcc 437  Q
    |||||||||| || ||||||||||||  ||||||||||||| ||  |||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  4282934 tacttcctccgtctcattttaactgagtcttttgctcattttacgtttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcc 4283033  T
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
     ||||||| |||||||| |||  |||||| |||||||  ||| |||||||| ||||||||    
T  4283034 cttatcaagtattggtgcattcctctttatcataaatgtaaaatagaatatattgaattg 4283093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 350 - 488
Target Start/End: Original strand, 928466 - 928603
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||  ||||||||||||| || | |||||||| ||| | ||||||||||||||||    
T  928466 tcccattttaactgagcccttggctcatttcacacttattaagaaaaaacgtataagtgaaagaga-aaaaaaatgggtttgagtgcctttatcaactat 928564  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatat 488  Q
    ||||| ||| ||||||| ||||||| |||| ||||||||    
T  928565 tggtgcattcttctttatcataaatgcaaaatagaatat 928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 2048448 - 2048325
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | | |||  |||||||||||||||| ||| || |||| |||||    
T  2048448 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatcataa 2048350  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || ||||||||||||| ||||||||    
T  2048349 atgcaaagtagaatatattgaattg 2048325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 373 - 504
Target Start/End: Original strand, 43950399 - 43950529
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||  ||| | || ||||| |||||||| | ||| |||||    
T  43950399 ctcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccattaacataa 43950497  T
Q  473 atacaaagtagaatatgttgaattggaagtga 504  Q
    || ||||||||||||| |||||||| ||||||    
T  43950498 atgcaaagtagaatatattgaattgaaagtga 43950529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 373 - 498
Target Start/End: Complemental strand, 9725034 - 9724910
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    |||||||||||| ||||||||||| |||||||| |||||| |||||| ||||| |||| | ||| |||||||| |||||||| ||| ||||||| |||||    
T  9725034 ctcatttcacacatattaagaaaa-gtgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataa 9724936  T
Q  473 atacaaagtagaatatgttgaattgg 498  Q
    ||  |||||||||||| |||||||||    
T  9724935 atgtaaagtagaatatattgaattgg 9724910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 332 - 503
Target Start/End: Original strand, 37528981 - 37529151
Alignment:
Q  332 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||| |||| ||||| ||||| |||||||||  | |||| |||||||||||||||||| ||||| | ||| ||| || |  ||||||||||||||||     
T  37528981 aaaaaattactccctccgtcccaatttaactgagtcatttgttcatttcacacttattaaaaaaaa-tatattagtaaaggatagagaaaaatggttttg 37529079  T
Q  432 aatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    | || |||| | || ||||||| |||||||||||| |||||||  |||||||||||  ||||||||||||||    
T  37529080 agtgtctttgttaagtattggtctatttttctttatcataaatgtaaagtagaataaattgaattggaagtg 37529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 2427521 - 2427387
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||||||| | ||||||||||||||||||||| ||| |   |||||||||||| ||| |||||| |||| || |||||| | ||| ||||||  |    
T  2427521 tttgctcatttcatatttattaagaaaaagtgtataactgacatatagagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtc 2427422  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||| ||||||||||||| ||||||||| ||||    
T  2427421 ataaatgcaaagtagaatatattgaattgggagtg 2427387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 368 - 503
Target Start/End: Original strand, 38872867 - 38873000
Alignment:
Q  368 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 467  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| | || | ||||||||||||| || |||  ||||||     
T  38872867 ttttgctcatttcatacttattaagaaaaagtgtaaaagtggaagagaaaaaaaaatggttttgagtgtccttatcaactattgatgcattcctctttat 38872966  T
Q  468 cataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||||| |||||  ||||| ||||||||| ||||    
T  38872967 cataaatataaagt--aatatattgaattgggagtg 38873000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 350 - 497
Target Start/End: Complemental strand, 7213654 - 7213508
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||| ||||| ||| || ||| ||||||||||||  ||||||||||| ||||||| |||||  |||||||||||| |||| | |||||||||||| |||    
T  7213654 tcccagtttaattgagccattttctcatttcacacagattaagaaaaa-tgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatat 7213556  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||| ||| |||||||  ||||||  ||||| |||||| ||||||||    
T  7213555 tggtgcattcttctttattataaatgtaaagtggaatatattgaattg 7213508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 341 - 504
Target Start/End: Original strand, 43427005 - 43427167
Alignment:
Q  341 cttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgccttt 440  Q
    |||||||| ||||||||||||||| |  ||  ||||||||| |||| |||||||||||||||||| |||||  ||||||||||| | ||| | |||| ||    
T  43427005 cttcctccgtcccattttaactgagctattgactcatttcatactttttaagaaaaagtgtataaatgaaa--gagagaaaaataggtttgagtgccctt 43427102  T
Q  441 at-caactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
     |  ||||||| ||| ||| ||||||| ||||||| |||| |||||||| ||||||||| |||||    
T  43427103 gtgaaactattagtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtga 43427167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 375 - 498
Target Start/End: Complemental strand, 24356265 - 24356143
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||| | ||||| | ||||||| |||| ||||| || ||| ||||||| |||||||    
T  24356265 catttcacacagattaagaaaa-gtgtataaaggaaagagagagaaaactagttttgagtgcctttttcaagtattgatgcattcttctttatcataaat 24356167  T
Q  475 acaaagtagaatatgttgaattgg 498  Q
      ||||||||||||||||||||||    
T  24356166 gtaaagtagaatatgttgaattgg 24356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 5426031 - 5425969
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagaga 419  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5426031 ttaactgatccttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagaga 5425969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 497
Target Start/End: Original strand, 10069530 - 10069659
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||| |||| ||||||| |||||| | | ||| |||| |||| ||| ||||  | |||    
T  10069530 cttttgctcatttcacactcattaagaaaaa-tatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttaccatta 10069628  T
Q  467 gcataaatacaaagtagaatatgttgaattg 497  Q
     ||||||| |||||| |||||| ||||||||    
T  10069629 tcataaatgcaaagtcgaatatattgaattg 10069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 485
Target Start/End: Original strand, 38280148 - 38280258
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||||||| |||||||  ||||  ||||||||||||||||| | ||||||| | || |||||||| ||| ||||||| ||||||    
T  38280148 tcatttcacacatattaagaaaaa-tgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaa 38280246  T
Q  474 tacaaagtagaa 485  Q
    |  |||||||||    
T  38280247 tgtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 498
Target Start/End: Original strand, 18181168 - 18181288
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    ||||||||  |||||||||| |||||||||||| || ||||||||||||||||||| ||| ||| | |  |||||||| ||| | |  || ||||||| |    
T  18181168 tttcacacagattaagaaaa-gtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  477 aaagtagaatatgttgaattgg 498  Q
    |||||||||||| |||||||||    
T  18181267 aaagtagaatattttgaattgg 18181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 31348632 - 31348545
Alignment:
Q  409 aaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    |||| ||||||||||||| ||| | |||| |||||||||||||||| ||| || |||| ||||||| || |||||||||| |||||||    
T  31348632 aaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatatattgaatt 31348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 336 - 498
Target Start/End: Original strand, 39166606 - 39166771
Alignment:
Q  336 aagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa---gtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||  |||| ||||||||||| ||| | |||||||||||||||| ||||||| |||||    | |||||||||||| || ||||||||| |||| |    
T  39166606 aagtactcgctccgtcccattttaattgagctttttgctcatttcacatttattaaaaaaaatatatatataagtgaaagagaaagaaaaatgattttga 39166705  T
Q  433 atgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    ||||| |||| || |||  ||  ||| || |||| |||||||  |||||| ||||| |||||||||    
T  39166706 atgcccttattaattatgtgtacattcttttttatcataaatgtaaagtataatatattgaattgg 39166771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 45464162 - 45464228
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    |||||||||||||||| |||||||||||| |||||||||||| | |||| ||||||| ||||||||||    
T  45464162 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagaaaaaaatgattttaaatgc 45464228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 503
Target Start/End: Original strand, 1908472 - 1908574
Alignment:
Q  401 tataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaa 500  Q
    ||||| |||||  ||||||||||||||||| | || ||||  ||| |||| ||| ||| ||||||| |||||||  |||||||||||| |||||||||||    
T  1908472 tataaatgaaatagagagaaaaatggttttgagtgtcttttgcaagtattagtgcattcttctttatcataaatgtaaagtagaatatattgaattggaa 1908571  T
Q  501 gtg 503  Q
    |||    
T  1908572 gtg 1908574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 18460642 - 18460521
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| |||||||| |||||| || ||||||||| |||| | || |||| |||| |||||||  ||| ||||||  |||||||    
T  18460642 catttcacacagattaagaaaa-gtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaat 18460544  T
Q  475 acaaagtagaatatgttgaattg 497  Q
      |||||||||||| ||||||||    
T  18460543 gtaaagtagaatatattgaattg 18460521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 36748302 - 36748181
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    |||||||||| ||||||||||| ||||||||  ||||  ||||||||||| ||||| | | ||||| |||| ||||||||  || ||||||| |||||||    
T  36748302 catttcacacatattaagaaaa-gtgtataaaagaaatagagagaaaaatagttttgagttcctttttcaagtattggtgcgttattctttatcataaat 36748204  T
Q  475 acaaagtagaatatgttgaattg 497  Q
      |||||| ||||| ||||||||    
T  36748203 ttaaagtaaaatatattgaattg 36748181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 503
Target Start/End: Complemental strand, 3200049 - 3199925
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||| | ||||||||||||  ||||||| |||||| ||||||||||||||||| | || | || | ||||||| ||| ||||   |||| |||||||     
T  3200049 atttcatatttattaagaaaagatgtataaatgaaagagagagaaaaatggttttgagtgtcattgttaactatttgtgcattt---tttatcataaatg 3199953  T
Q  476 caaagtagaatatgttgaattggaagtg 503  Q
    ||||||| ||||| ||||||||| ||||    
T  3199952 caaagtataatatattgaattgggagtg 3199925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 14384057 - 14384133
Alignment:
Q  368 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaa 445  Q
    ||||| |||||||| || |||||||||||| | ||||| |||||| ||||||||||||||||| |||| |||||||||    
T  14384057 ttttgttcatttcatacatattaagaaaaaatatataaatgaaagagagagaaaaatggttttgaatg-ctttatcaa 14384133  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 377 - 497
Target Start/End: Complemental strand, 31592703 - 31592583
Alignment:
Q  377 tttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||||| |||||| ||||| ||||||||||||||| ||||||||||| ||||  | || | || |||| ||||| || ||| ||  ||| ||||||||    
T  31592703 tttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagtttcgagtgtc-ttgtcaagtattgctgcattctttcttatcataaata 31592605  T
Q  476 caaagtagaatatgttgaattg 497  Q
    ||||||||||||| ||||||||    
T  31592604 caaagtagaatatattgaattg 31592583  T

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Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 497
Target Start/End: Complemental strand, 9472594 - 9472455
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgta 456  Q
    |||||||||||  |||  |||||||||| |||||||||||| ||||||| |||||| || |||| ||||||||  | || |||| |||| ||||| |  |    
T  9472594 ttaactgaaccagttgaccatttcacacatattaagaaaaa-tgtataaatgaaagagatagaacaatggtttagagtgtctttgtcaagtattgataca 9472496  T
Q  457 tttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || ||||||| |||||||  | |||||||||| ||||||||    
T  9472495 ttcttctttatcataaatgtatagtagaatatattgaattg 9472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 32556330 - 32556270
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||    
T  32556330 tttgttcatttcacacatattaagaaaa-gtgtataagtgaaa--gagagaaaaatggttttaa 32556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 504
Target Start/End: Complemental strand, 2756829 - 2756700
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    |||||||||||||||||||||||| ||||| | ||||   |||||||||||  |||||| |||  || |||| |||| ||| ||||  | ||| ||||||    
T  2756829 tcatttcacacttattaagaaaaa-tgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatttaccattatcataaa 2756731  T
Q  474 tacaaagtagaatatgttgaattggaagtga 504  Q
    |  |||||||||||| || ||||||||||||    
T  2756730 tgtaaagtagaatatattaaattggaagtga 2756700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 6213778 - 6213859
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||| ||||| |||  ||||||||||||||||||||||||||||||| || || |||||| |  ||||||||||| ||||||    
T  6213778 tcccaatttaagtgagtcttttgctcatttcacacttattaagaaaaa-tgaattagtgaatgaaagagaaaaatgattttaa 6213859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Complemental strand, 14890470 - 14890373
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| || ||||||||| ||||||| ||||||  ||| |||||||||||| | || ||||||||| |||| ||| ||| ||||||| ||||||    
T  14890470 tcatttcacacatactaagaaaaa-tgtataaatgaaag--agataaaaatggttttgagtgtctttatcaagtattagtgcattcttctttatcataaa 14890374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 883100 - 883159
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 429  Q
    |||| ||||||||||| | ||||||||| ||||||||||||||| || |||||||||||||    
T  883100 tttgttcatttcacacattttaagaaaa-gtgtataagtgaaagagaaagaaaaatggttt 883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 432
Target Start/End: Original strand, 8550593 - 8550651
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||  ||| ||||||| |||||||||||||| ||||||||| |||||||||    
T  8550593 ctcatttcacacacatttagaaaaa-tgtataagtgaaagagagagaaaagtggttttaa 8550651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 485
Target Start/End: Original strand, 12949908 - 12950026
Alignment:
Q  366 ccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttt 465  Q
    ||||||| ||||||||||  ||||| |||||| |||||||||||||| |||| ||||||  |||| | || | || |||| |||||||| |||  | |||    
T  12949908 ccttttgttcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaataattttgagtgtc-ttgtcaagtattggtgaattccttttt 12950006  T
Q  466 agcataaatacaaagtagaa 485  Q
    | ||||||| ||||||||||    
T  12950007 atcataaatgcaaagtagaa 12950026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 28527124 - 28527062
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||||||| |||||||||||| ||||||| |||| | || | ||||||||||||||    
T  28527124 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagaaaaaaaaatggttttaa 28527062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 40965170 - 40965112
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  40965170 ctcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaa 40965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 44737026 - 44736964
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||||||| |||||||||||| ||||||||| || | |||| ||||||| ||||||    
T  44737026 tttgctcatttcacacatattaagaaaaa-tgtataagttaatgagagataaaaatgattttaa 44736964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 374 - 488
Target Start/End: Complemental strand, 3123801 - 3123688
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||||||| ||||||| ||||   |||||||||||  |||||| ||| || || || |||||||| ||| |||  || ||||||    
T  3123801 tcatttcacacatattaagaaaaa-tgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattcttcactatcataaa 3123703  T
Q  474 tacaaagtagaatat 488  Q
    |||||| | ||||||    
T  3123702 tacaaaatggaatat 3123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 5007194 - 5007240
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 422  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  5007194 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 5007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 43077678 - 43077763
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttt 460  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||||||   || | ||||||||||| |||||    
T  43077678 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcatttt 43077763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 362 - 412
Target Start/End: Complemental strand, 44024875 - 44024825
Alignment:
Q  362 tgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 412  Q
    ||||||||||| ||| ||||||| |||||||||||| | ||||||||||||    
T  44024875 tgaaccttttgttcacttcacacgtattaagaaaaaatctataagtgaaag 44024825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 44424241 - 44424337
Alignment:
Q  399 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||| ||||| ||||||||||| |||| | || |||| ||||| || ||||||  ||| ||||||| |||||| |||||| ||||||||    
T  44424241 tgtataagtgaaagagagag-aaaatggttttgaatgtc-ttgtcaagtattgatgcattttttattatcataaatgcaaagttgaatatattgaattg 44424337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 435026 - 435087
Alignment:
Q  372 gctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| |||| |||||| |||||||    
T  435026 gctcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaa 435087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 10394202 - 10394295
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||||||||| |||||  ||||||||||  |||| |||||||||||  ||||||||||| |||||||  ||| | |||||||||||  |||||||||    
T  10394202 tacttcctccatcccaaattaactgaactatttgttcatttcacac--attaagaaaaa-tgtataaaagaaggagagagaaaaataattttaaatg 10394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 14306031 - 14306072
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaa 397  Q
    ||||| ||||| |||||||||||||||| |||||||||||||    
T  14306031 tttaagtgaacattttgctcatttcacatttattaagaaaaa 14306072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 39159780 - 39159717
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39159780 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39159717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 39209414 - 39209477
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||| || |||||||||||| ||||||    
T  39209414 cttttgctcatttcacacttatt-agaaaaa-tgtaatagtgatagagagagaaaaatgattttaa 39209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 350 - 503
Target Start/End: Original strand, 15371791 - 15371943
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||||||||||| || || | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | || | |||||||||||    
T  15371791 tcccattttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtc-ttatcaactat 15371889  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    | ||| ||| ||||||| ||||||| ||||||||||||| ||||||||| ||||    
T  15371890 tagtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtg 15371943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 15325337 - 15325180
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| |  ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||     
T  15325337 tactccctccgtcccattttaactgagctcttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgcc- 15325239  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||||||||||| || ||||||| | ||||| ||||||||||||| ||| ||||    
T  15325238 ttatcaactattggtgtgttcttctttatcgtaaatgcaaagtagaatatattggattg 15325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 350 - 497
Target Start/End: Original strand, 15321153 - 15321299
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||||||||||| || || ||| |||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| | || | |||| ||||||    
T  15321153 tcccattttaactgatcccttggcttatttcacaattattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtgtc-ttataaactat 15321251  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||  || ||||||| ||||||| ||||||||||||| ||||||||    
T  15321252 tggtgcgttcttctttatcataaatgcaaagtagaatatattgaattg 15321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 15355752 - 15355608
Alignment:
Q  352 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 451  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||||||||||||    
T  15355752 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 15355654  T
Q  452 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||| ||| ||||||| ||||||| |||||||||||||  |||||||    
T  15355653 gtgcattcttctttatcataaatccaaagtagaatataatgaattg 15355608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 34803621 - 34803781
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||| ||| || || ||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||| | || ||    
T  34803621 tactccctccgtcccattttaattgagcccttagctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtct 34803720  T
Q  439 ttatcaactattggtgtatttttctt--tagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||||||| || |||  ||||  || ||||||| |||| || ||||| ||||||||    
T  34803721 ttatcaactattgatgcattcctctttatatcataaatgcaaaataaaatatattgaattg 34803781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 339 - 498
Target Start/End: Original strand, 33921386 - 33921544
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| || |||||||||||| |||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||  |    
T  33921386 tactccctccgtcccattttaactgagccatttgctcatttcgcacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtgt 33921484  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    || | || |||||||  ||| ||||||| |||||||  |||||||||||| |||||||||    
T  33921485 ttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgaattgg 33921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 350 - 497
Target Start/End: Original strand, 15351311 - 15351457
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||||||| |||| | ||  ||||||||||| ||||||||||||| |||||||||||| | ||||||||| || |||| | |||| |||||||||||    
T  15351311 tcccattttaattgaatccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgcc-ttatcaactat 15351409  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || ||  || ||||||| ||||||| ||| ||||||||| ||||||||    
T  15351410 tgatgcgttcttctttatcataaatgcaaggtagaatatattgaattg 15351457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 393 - 495
Target Start/End: Original strand, 3166078 - 3166180
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 492  Q
    ||||||||||||| |||||| ||||||||||| ||||| | || ||||| ||| ||||| |||||||||||||| |||||||  |||||||||||| |||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagtagaatatattg 3166177  T
Q  493 aat 495  Q
    |||    
T  3166178 aat 3166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 352 - 504
Target Start/End: Original strand, 31075854 - 31076005
Alignment:
Q  352 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 451  Q
    ||||||||| ||| | ||||| ||||||||| |  ||||||||||| |||| ||||||||| |||||||||||||| || | || |||| ||||||||||    
T  31075854 ccattttaagtgatcattttgttcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaatggtattgagtgtcttt-tcaactattg 31075952  T
Q  452 gtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtga 504  Q
    ||| |||  |  ||| |||||||||||| || ||||| ||||||||| |||||    
T  31075953 gtgcattccttcttatcataaatacaaaatataatatattgaattgggagtga 31076005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 393 - 496
Target Start/End: Original strand, 3874020 - 3874123
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttg 492  Q
    ||||||||||||| |||||| |||| ||||||| |||| | || |||| |||| |||||||| ||| ||||||| |||||||  ||||| |||||| |||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatatattg 3874119  T
Q  493 aatt 496  Q
    ||||    
T  3874120 aatt 3874123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 4553059 - 4552936
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagt-gaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcat 470  Q
    |||||||||||||||||||||||||  |||||||||  |||| ||||||||||||||||| | |         ||||||||||| ||| ||||||| |||    
T  4553059 gctcatttcacacttattaagaaaatatgtataagtaaaaagagagagaaaaatggttttgagt---------aactattggtgcattcttctttatcat 4552969  T
Q  471 aaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||| |||| |||||||| || |||||| ||||    
T  4552968 aaatgcaaattagaatatattaaattgggagtg 4552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 423
Target Start/End: Complemental strand, 16126402 - 16126318
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaa 423  Q
    |||| ||||| || ||||||||||||   ||||| ||||||||||| ||||||||||||||||| ||| ||||| |||| |||||    
T  16126402 tactccctccgtctcattttaactgactattttgttcatttcacacgtattaagaaaaagtgtaaaagcgaaagagagaaaaaaa 16126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 3604552 - 3604679
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||| ||| ||||||| | |||| ||||||||||||||||||| | |  || | || |||||||| ||| | | |||   ||||    
T  3604552 tcatttcacacatattaagacaaa-tgtataaataaaagagagagaaaaatggttttaagttctcttgttaagtattggtgcattctccattattgtaaa 3604650  T
Q  474 tacaaagtagaatatgttgaattggaagt 502  Q
    | |||||| |||||| |||||||||||||    
T  3604651 tgcaaagtggaatatattgaattggaagt 3604679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 372 - 432
Target Start/End: Complemental strand, 15081580 - 15081521
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  15081580 gctcatttcacacgtattaagaaaaa-tgtataaatgaaggtgagagaaaaatagttttaa 15081521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 33109530 - 33109467
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    ||||||||||||| |||||||||||| ||||||  |||| | ||||||||||| |||||||||||    
T  33109530 gctcatttcacacgtattaagaaaaa-tgtatagatgaatgagagagaaaaatagttttaaatgc 33109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 20027724 - 20027637
Alignment:
Q  388 ttaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||||||||||||||||||||||  | || |||||| |||| | || |||| | || |||||||| ||| ||||||| ||||||||    
T  20027724 ttaagaaaaagtgtataagtgaaagaaatagcaaaatgattttgagtgtctttgttaagtattggtgcattcttctttatcataaata 20027637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 7739465 - 7739530
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||||||||||||||  || ||||||||| |||||||||||||| || |||||||| |||| |||||    
T  7739465 tttgctcatttcacatgtaataagaaaaa-tgtataagtgaaagagatagaaaaatagtttaaaatg 7739530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 344 - 430
Target Start/End: Complemental strand, 20384030 - 20383944
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||| ||||||| | | ||||| ||||| || ||| |||| ||||||||||| || | |||||||||| |||| ||||||||||||    
T  20384030 cctccatcccattattagtgaactttttgttcctttaacacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggtttt 20383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 502
Target Start/End: Complemental strand, 31265932 - 31265807
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    ||||||||| |||||||| ||| ||||||| |||| | ||||||||||| ||||||| |||  || | || |||||||| ||| | |  || |||||||     
T  31265932 atttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattctccactatcataaatg 31265834  T
Q  476 caaagtagaatatgttgaattggaagt 502  Q
     ||||| |||||| |||||||||||||    
T  31265833 taaagtggaatatattgaattggaagt 31265807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 503
Target Start/End: Original strand, 33017958 - 33018024
Alignment:
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||| |||| |||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  33017958 ctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 33018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 32776174 - 32776010
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| | ||||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| | |||||    
T  32776174 tactccctccgttccattataaatgagccttttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcct 32776075  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || | || |||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  32776074 ttgttaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 32776010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 339 - 498
Target Start/End: Original strand, 29996945 - 29997104
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||||||||| ||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |     
T  29996945 tacttcctccgtcctattttaactgagcctttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtcc 29997044  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    || | || |||||||| ||| ||||||| ||||||| ||||||| ||||| |||| ||||    
T  29997045 ttgttaattattggtgcattcttctttatcataaatgcaaagtataatatattgagttgg 29997104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 343 - 493
Target Start/End: Complemental strand, 47238404 - 47238254
Alignment:
Q  343 tcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttat 442  Q
    |||||| | |||||||||| ||  | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||||    
T  47238404 tcctccgttccattttaaccgagtcattggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttat 47238305  T
Q  443 caactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||| ||||||| ||| ||||||| ||||||| ||||||| || |||||||    
T  47238304 caacaattggtgcattcttctttatcataaatgcaaagtacaaaatgttga 47238254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 339 - 503
Target Start/End: Complemental strand, 37264502 - 37264340
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||| | ||||     
T  37264502 tactccctccgtcccattttaagtgagccttttgctcatttcacacatattaagaaaaagtatataagtgaaa--gagagaaaaatggttttgagtgccc 37264405  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || |||| ||||| || |||  |||||| ||||||| ||||||||||||| ||||||||| ||||    
T  37264404 ttgtcaagtattgatgcattgctctttatcataaatgcaaagtagaatatattgaattgggagtg 37264340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 32971968 - 32972092
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||| |||||||||||||||| ||| || |||  |||||    
T  32971968 ctcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtcataa 32972067  T
Q  473 atacaaagtagaatatgttgaattg 497  Q
    || ||||||||||||| ||||||||    
T  32972068 atgcaaagtagaatatattgaattg 32972092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 23111039 - 23111159
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||| ||||||||||||||| ||||||| |||||  |||||||||||| |||| |||| |||||||||||||||||| ||| ||||||| |||||    
T  23111039 ctcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataa 23111138  T
Q  473 atacaaagtagaatatgttga 493  Q
    ||  |||||||||||| ||||    
T  23111139 atgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 389 - 497
Target Start/End: Original strand, 10355701 - 10355809
Alignment:
Q  389 taagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 488  Q
    |||||||||||||||||||| ||| |||| |||||||||||| | || | |||||||||||||||| |||| |||||| ||||||| |||||||||||||    
T  10355701 taagaaaaagtgtataagtgtaagagagaaaaaaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagtagaatat 10355800  T
Q  489 gttgaattg 497  Q
     ||||||||    
T  10355801 attgaattg 10355809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 38589857 - 38589761
Alignment:
Q  407 tgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||| ||| ||||||| |||||||  |||||||||||| ||||||||| ||||    
T  38589857 tgaaagagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtg 38589761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 488
Target Start/End: Complemental strand, 8150135 - 8150001
Alignment:
Q  353 cattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattgg 452  Q
    |||| ||| |||| ||| || ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||  ||| |||| |||| |    
T  8150135 cattataaatgaatcttgtgttcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtg-ttttgtcaaatatttg 8150037  T
Q  453 tgtatttttctttagcataaatacaaagtagaatat 488  Q
    || ||||| | ||| ||||||  |||||||||||||    
T  8150036 tgcattttccattatcataaaatcaaagtagaatat 8150001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 498
Target Start/End: Original strand, 45218111 - 45218233
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| ||||||||  ||||| ||||||||||| ||||| | ||||||| |||| |||||||| ||| ||||||| |||||||    
T  45218111 catttcacacaaattaagaaaa-gtgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 45218209  T
Q  475 acaaagtagaatatgttgaattgg 498  Q
      |||||||||||| |||||||||    
T  45218210 gtaaagtagaatatattgaattgg 45218233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 375 - 497
Target Start/End: Complemental strand, 2849409 - 2849288
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    |||||||||| |||||||||||| ||||||| |||||| ||||||||||| |||||   || |||| |||| |||||||| ||| ||||||| |||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaat 2849311  T
Q  475 acaaagtagaatatgttgaattg 497  Q
      |||||||||||| ||||||||    
T  2849310 gtaaagtagaatatattgaattg 2849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 344 - 430
Target Start/End: Original strand, 33773965 - 33774051
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||| ||||||||||||||||| |||   ||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||    
T  33773965 cctccgtcccattttaactgaacttttaattcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagtttt 33774051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 497
Target Start/End: Complemental strand, 43008057 - 43007927
Alignment:
Q  368 ttttgctcatttcacacttattaagaaaaagt-gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    ||||||||||||||||| | ||||||||||   ||||||||||||| ||| ||||||| ||||| | || |||| |||| |||| ||| |||||||||||    
T  43008057 ttttgctcatttcacacatgttaagaaaaaaacgtataagtgaaagagagggaaaaatagttttgagtgtctttgtcaagtatttgtgcatttttcttta 43007958  T
Q  467 gcataaatacaaagtagaatatgttgaattg 497  Q
     |||||||  ||| |||||||| ||||||||    
T  43007957 tcataaatttaaattagaatatattgaattg 43007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 375 - 503
Target Start/End: Original strand, 30659433 - 30659560
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  |||||||||| ||||| ||  ||||| ||||||||||| ||||| | ||||||| |||| |||| |||  || ||||||| |||||||    
T  30659433 catttcacacagattaagaaaa-gtgtacaaaggaaagagagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaat 30659531  T
Q  475 acaaagtagaatatgttgaattggaagtg 503  Q
    | |||||||||||| ||||||| ||||||    
T  30659532 ataaagtagaatatattgaatttgaagtg 30659560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 497
Target Start/End: Complemental strand, 9603017 - 9602894
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9603017 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9602918  T
Q  474 tacaaagtagaatatgttgaattg 497  Q
    | |||||||||| || ||||||||    
T  9602917 tgcaaagtagaacatattgaattg 9602894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 497
Target Start/End: Complemental strand, 9830588 - 9830465
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    |||||||||||||||||| |||||||| ||||||| ||| |||| |||||| | ||| |||||  || | |||||||| || ||| || |||| ||||||    
T  9830588 tcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttttatcataaa 9830489  T
Q  474 tacaaagtagaatatgttgaattg 497  Q
    | |||||||||| || ||||||||    
T  9830488 tgcaaagtagaacatattgaattg 9830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 34064405 - 34064248
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| |||||||||| ||||| |||| ||||||  || |||||||| |||||| ||||||||||||| |||||  ||||||||||| ||||| | || |     
T  34064405 tactccctccctcccgttttatctgagcctttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtgtc- 34064307  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    || | || |||||||| ||| ||  ||| |||||||  |||||||||||| ||||||||    
T  34064306 ttgttaagtattggtgcattctttcttatcataaatgtaaagtagaatatattgaattg 34064248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 481
Target Start/End: Complemental strand, 6697242 - 6697130
Alignment:
Q  368 ttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttag 467  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||  |||||| ||  ||| ||   |||||||| ||||||| |||     
T  6697242 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 6697144  T
Q  468 cataaatacaaagt 481  Q
    ||||||| ||||||    
T  6697143 cataaatgcaaagt 6697130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 372 - 488
Target Start/End: Complemental strand, 21446594 - 21446478
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    |||||||| | ||||||||||||||| |||||||||||||| |||||||||||  |||| | || | |||| || |||| ||| ||| || |||| ||||    
T  21446594 gctcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgcattcttttttatcata 21446495  T
Q  472 aatacaaagtagaatat 488  Q
    |||| |||||| |||||    
T  21446494 aatataaagtataatat 21446478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 39143601 - 39143680
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 429  Q
    ||||||| ||| |||  |||||||||||||||||| ||| ||||||||||||||| ||||||  ||||||| ||||||||    
T  39143601 tcccattataagtgagtcttttgctcatttcacacgtataaagaaaaagtgtatatgtgaaatagagagaataatggttt 39143680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 454
Target Start/End: Complemental strand, 27622035 - 27621913
Alignment:
Q  332 aaaaaagtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttta 431  Q
    |||||| |||| ||||| ||||||||||| ||| |  ||  ||||||||||||||||||||||||| |||||||   |||| || ||||||||| ||||     
T  27622035 aaaaaactactccctccgtcccattttaattgagctcttaactcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgattttg 27621936  T
Q  432 aatgcctttatcaactattggtg 454  Q
    | | || ||||||| ||||||||    
T  27621935 agtacccttatcaattattggtg 27621913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 497
Target Start/End: Complemental strand, 36070247 - 36070138
Alignment:
Q  387 attaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaat 486  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||| | || |||| |||| |||||||| ||| ||||||| ||||||   ||||||||||    
T  36070247 attaagaaaaa-tgtataaatgaaagagagaggaaaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagtagaat 36070149  T
Q  487 atgttgaattg 497  Q
    ||  |||||||    
T  36070148 atactgaattg 36070138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 9658993 - 9658937
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggtttt 430  Q
    ||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||    
T  9658993 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggtttt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 11616733 - 11616660
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||| || |||||||||||||||| |||||| ||||  ||||||| |||| | |||||||||||||||||||    
T  11616733 ttaactgagccatttgctcatttcacacatattaaaaaaa--tgtataaatgaaggagagagaaaaatggttttaa 11616660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 503
Target Start/End: Complemental strand, 18731550 - 18731466
Alignment:
Q  419 aaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||||| ||||| | || ||||||||| ||||| || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  18731550 aaaaatcgttttgagtgtctttatcaagtattgatgaattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 18731466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 45890805 - 45890888
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggt 453  Q
    |||| ||||||||||| |||||||||||| |||||||  ||| | ||||||||||||||||||||||| ||| | || |||||||    
T  45890805 tttgttcatttcacacgtattaagaaaaa-tgtataaaagaaggagagagaaaaatggttttaaatgcttttgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 39343644 - 39343744
Alignment:
Q  394 aaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    |||||||||||| ||||||  |||||| ||| ||||| | ||| ||| |||| |||| ||||||| ||||||| |||||||  |||||||||||| ||||    
T  39343644 aaaagtgtataaatgaaag--agagaacaatcgttttgagtgcatttgtcaagtatttgtgtattcttctttatcataaatgtaaagtagaatatattga 39343741  T
Q  494 att 496  Q
    |||    
T  39343742 att 39343744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 5724660 - 5724724
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctt 439  Q
    ||||||||||| |||||||||||| ||||||| |||| | ||||||||||| ||||||| ||||||    
T  5724660 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcctt 5724724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 7425829 - 7425957
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatg-cctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| ||  |||  | || |||||||| ||| | |  || |||||    
T  7425829 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgcattctccactatcataa 7425927  T
Q  473 atacaaagtagaatatgttgaattggaagt 502  Q
    || |||||| |||||| |||||||||||||    
T  7425928 atgcaaagtggaatatattgaattggaagt 7425957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 36194599 - 36194684
Alignment:
Q  367 cttttgctcatttcacacttattaagaaa-aagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 451  Q
    ||||| ||||||||||| || |||||||| || ||||||| |||  | || |||||||||||||||||||||||||| || |||||    
T  36194599 cttttactcatttcacatttgttaagaaagaaatgtataaatgagcgagaaagaaaaatggttttaaatgcctttattaattattg 36194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 3667832 - 3667951
Alignment:
Q  377 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatac 476  Q
    |||||||| |||||||||| |||||||||||||||   ||||||||||  |||| | || | ||||||| |||| ||| ||| ||  ||| |||||||      
T  3667832 tttcacacatattaagaaatagtgtataagtgaaaaaaagagaaaaataattttgagtgtc-ttatcaagtattagtgcattatttcttatcataaatgt 3667930  T
Q  477 aaagtagaatatgttgaattg 497  Q
    |||||||||||| ||||||||    
T  3667931 aaagtagaatatattgaattg 3667951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 13590862 - 13590918
Alignment:
Q  214 tttgtttttcatcattgttatgttaatttctctaaggactagattgatgaaatcatg 270  Q
    ||||||| | || ||||||||| |||||||||||||||| ||||||| |||||||||    
T  13590862 tttgtttctgattattgttatgctaatttctctaaggaccagattgacgaaatcatg 13590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 13590644 - 13590735
Alignment:
Q  116 tgaagtcagtgtgttacttttcggtttctcaatgttaataattctcaaatttacaaagttttccagaggtaattagaaaattcataattagt 207  Q
    |||| ||||||||||||| || ||||||||| || ||| ||| |||||||||  | ||||||  ||| |||||| |||||||||| ||||||    
T  13590644 tgaattcagtgtgttactatttggtttctcagtggtaaaaatgctcaaatttgtatagttttatagatgtaatttgaaaattcatgattagt 13590735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 497
Target Start/End: Complemental strand, 24288539 - 24288456
Alignment:
Q  414 gagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||| |||| ||||| | ||||||| |||| |||| ||| ||| ||||||| |||||||  |||||||||||| ||||||||    
T  24288539 gagagataaatagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatattgaattg 24288456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 504
Target Start/End: Complemental strand, 29257707 - 29257573
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||  |||||| |||||||| ||| ||||||| ||||   |||| |||||||||||||| |||  || | || ||||||| |||||| |  || |    
T  29257707 tttgctcaaatcacacatattaagacaaa-tgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggtctattttccactatc 29257609  T
Q  469 ataaatacaaagtagaatatgttgaattggaagtga 504  Q
    |||||| |||||| |||||| ||||||||| |||||    
T  29257608 ataaatgcaaagtggaatatattgaattgggagtga 29257573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 497
Target Start/End: Original strand, 37490570 - 37490692
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| | |||||||||| ||||||| |||| | |||||||||||| |||||| ||  ||| | || |||||||| ||| | |  || ||||||    
T  37490570 tcatttcacacatgttaagaaaaa-tgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataaa 37490668  T
Q  474 tacaaagtagaatatgttgaattg 497  Q
    | |||||| |||||| ||||||||    
T  37490669 tgcaaagtggaatatattgaattg 37490692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 435
Target Start/End: Complemental strand, 39498838 - 39498768
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaa--agtgtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    ||||||||||||||||||||||||| ||||  |  |||| |||||| | ||||||||||| ||||||||||    
T  39498838 cttttgctcatttcacacttattaaaaaaaatatagtattagtgaatgagagagaaaaatagttttaaatg 39498768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 44604413 - 44604487
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||| ||||||||  |||||| |||||||| ||| ||||||| |||| | |||||||||||| ||||||    
T  44604413 ttaactgaaccatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatgattttaa 44604487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 419
Target Start/End: Original strand, 37496354 - 37496392
Alignment:
Q  381 acacttattaagaaaaagtgtataagtgaaagggagaga 419  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  37496354 acacatattaagaaaaagtgtataagtgaaagagagaga 37496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 432
Target Start/End: Complemental strand, 23058972 - 23058916
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||| |||||||||||| | ||||| |||||| ||||||||||| |||||||    
T  23058972 catttcacacgtattaagaaaaa-tatataaatgaaagagagagaaaaatagttttaa 23058916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 31549556 - 31549597
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaa 397  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  31549556 tttaactgagtcttttgctcattttacacttattaagaaaaa 31549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 504
Target Start/End: Complemental strand, 33584694 - 33584589
Alignment:
Q  399 tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgg 498  Q
    ||||||| |||| | ||||||||||||||||||| |||  || | || |||||||||||| | |  || ||||||| |||| | |||||| |||||||||    
T  33584694 tgtataaatgaaggagagagaaaaatggttttaagtgctattgttaagtattggtgtattctccagtatcataaatgcaaaatggaatatattgaattgg 33584595  T
Q  499 aagtga 504  Q
     |||||    
T  33584594 gagtga 33584589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 49100453 - 49100509
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttt 429  Q
    ||||||||||||| |||||||||||| ||||||| ||||||  |||||||||| ||||    
T  49100453 gctcatttcacacgtattaagaaaaa-tgtataaatgaaagacagagaaaaatagttt 49100509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 8e-36; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 339 - 496
Target Start/End: Original strand, 5147413 - 5147570
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| |||||||||||||||  ||||  ||||||||||||||||||||||||| | ||||||||||||  ||||||||||| |||| | || |     
T  5147413 tactccctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtcc 5147512  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||||||||| |||||||    
T  5147513 ttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 38979095 - 38978937
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||| | ||||     
T  38979095 tactccctccgtcccattttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgccc 38978996  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||| ||||||||||  |||  |||||| ||||||| ||||||||||||| || |||||    
T  38978995 ttattaactattggtacattcctctttatcataaatgcaaagtagaatatattaaattg 38978937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 356 - 503
Target Start/End: Original strand, 13016298 - 13016444
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 455  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | ||||||||||||||||     
T  13016298 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13016397  T
Q  456 atttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    | || |||||| ||||||| ||||||||||||| ||||||||| ||||    
T  13016398 a-ttctctttatcataaatgcaaagtagaatatattgaattgggagtg 13016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 15564810 - 15564963
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||||||||| |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | | ||     
T  15564810 tacttcctccatcccattttagctgagtctttcgctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtaccc 15564909  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    |||||||||||||||| ||     |||| ||||||| ||||||||||||| || |||||    
T  15564910 ttatcaactattggtgcat-----tttatcataaatgcaaagtagaatatattaaattg 15564963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 497
Target Start/End: Original strand, 13087676 - 13087816
Alignment:
Q  356 tttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgt 455  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||| | || | ||||||||||||||||     
T  13087676 tttaattgaacccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgc 13087775  T
Q  456 atttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    | || |||||| ||||||| ||||||||||||| ||||||||    
T  13087776 a-ttctctttatcataaatgcaaagtagaatatattgaattg 13087816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 337 - 503
Target Start/End: Original strand, 5357733 - 5357898
Alignment:
Q  337 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    |||||| ||||| ||||| ||||| |||||| |||||||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||     
T  5357733 agtactccctccgtcccaatttaattgaaccatttgctcattacacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgt 5357831  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    |||| | || |||||||  ||| ||||||| |||||||  |||||||||||| ||| ||||||||||    
T  5357832 ctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtg 5357898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 42819060 - 42818938
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| | |||| |||| ||  ||||||| ||| ||||||| |||||    
T  42819060 ctcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatcataa 42818961  T
Q  473 atacaaagtagaatatgttgaat 495  Q
    ||  |||||||||||| ||||||    
T  42818960 atgtaaagtagaatatattgaat 42818938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 351 - 487
Target Start/End: Complemental strand, 4195112 - 4194975
Alignment:
Q  351 cccattttaactgaaccttttgctcatttcacacttattaagaaaaa-gtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    |||||||||||||| || ||  | ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| |||| ||||||    
T  4195112 cccattttaactgagcccttgacgcatttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactat 4195013  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaata 487  Q
    || || ||| ||||||| |||||||  |||||||||||    
T  4195012 tgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 31090482 - 31090337
Alignment:
Q  352 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 451  Q
    |||||||||||||  | ||  ||||||| ||| ||||||||||||| |||||||||||||  |||||||||||| |||| | |||| |||||||||||||    
T  31090482 ccattttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattg 31090383  T
Q  452 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||| ||| ||||||| ||||||  ||||||||||||| | ||||||    
T  31090382 gtgcattcttctttatcataaacgcaaagtagaatatatggaattg 31090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 339 - 502
Target Start/End: Original strand, 16926006 - 16926171
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta---taagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||| ||||| ||||||| ||| ||| ||||||||||||||||||| |||||| || |||||||   |||||||||| | ||||||||||||||| | ||    
T  16926006 tactccctccgtcccattataattgacccttttgctcatttcacacatattaa-aagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtg 16926104  T
Q  436 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagt 502  Q
    ||||  | || |||||||| ||| ||||||| |||||||  |||||||||||| |||||||||||||    
T  16926105 ccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaatatattgaattggaagt 16926171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 339 - 503
Target Start/End: Original strand, 39060340 - 39060503
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| | ||| ||||| |||||| ||||||||||||||||||||||||||||| | ||| |||||| | ||||||||||||||||| | ||| |    
T  39060340 tactccctccgttccaatttaattgaaccatttgctcatttcacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgcat 39060438  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || | || |||||||  ||| ||||||| ||||||| ||||||||| ||| ||| ||||||||||    
T  39060439 ttgttaagtattggtccattcttctttatcataaatgcaaagtagactatattgtattggaagtg 39060503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 350 - 503
Target Start/End: Original strand, 25111078 - 25111229
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| |||| |||    
T  25111078 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtat 25111175  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  25111176 tgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 25111229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 350 - 503
Target Start/End: Original strand, 25170169 - 25170320
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||| ||| ||| | ||||||||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| |||| |||    
T  25170169 tcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtat 25170266  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || || ||| ||||||| |||||||  |||||||||||| ||||||||||||||    
T  25170267 tgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtg 25170320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 31196512 - 31196352
Alignment:
Q  337 agtacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgc 436  Q
    |||||||||||| ||||||||||||||||   || |||||||||||||||||||||||||  ||||||| |||||| || |||||||| ||||| | ||     
T  31196512 agtacttcctccgtcccattttaactgaattcttggctcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgt 31196413  T
Q  437 ctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    | || |||  ||||| || |||||||||||  ||| || ||||||||||||| ||| ||||    
T  31196412 ccttgtcatttattgctgcatttttctttattatacatgcaaagtagaatatattggattg 31196352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 373 - 504
Target Start/End: Original strand, 11099429 - 11099559
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataa 472  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||||| ||||||| ||  ||| | || |||||||| ||| | |  || |||||    
T  11099429 ctcatttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataa 11099527  T
Q  473 atacaaagtagaatatgttgaattggaagtga 504  Q
    ||||||||| |||||| ||||||||| |||||    
T  11099528 atacaaagtggaatatattgaattgggagtga 11099559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 503
Target Start/End: Complemental strand, 25108751 - 25108600
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| | || |||    
T  25108751 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgttaagtat 25108654  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || || ||| ||||||| |||||||  |||||| ||||| ||||||||||||||    
T  25108653 tgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtg 25108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 503
Target Start/End: Complemental strand, 25167843 - 25167692
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactat 449  Q
    ||||||| ||| ||| | |||| |||||||||||| ||||||||||| | ||| |||||||||  |||||||||| ||||| | || |||| | || |||    
T  25167843 tcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgttaagtat 25167746  T
Q  450 tggtgtatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
    || || ||| ||||||| |||||||  |||||| ||||| ||||||||||||||    
T  25167745 tgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtg 25167692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 339 - 496
Target Start/End: Original strand, 39060868 - 39061028
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagt---gtataagtgaaagggagagaaaaatggttttaaatg 435  Q
    |||| ||||| ||||||||||| | |  ||||  ||||||||||||||||||||||||| |   ||||||||||||| ||||||||||||  ||| | ||    
T  39060868 tactccctccgtcccattttaatttagactttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtg 39060967  T
Q  436 cctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
     | || ||||| | | ||| ||| ||||||| ||||||| ||||||||||||| |||||||    
T  39060968 tccttgtcaaccactagtgcattcttctttatcataaatgcaaagtagaatatattgaatt 39061028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 400 - 497
Target Start/End: Complemental strand, 15898321 - 15898224
Alignment:
Q  400 gtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||||||||||||| ||||||||||||  ||||| || | |||| |||||||| || ||| ||||||| ||||||| ||||||||||||| ||||||||    
T  15898321 gtataagtgaaagagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattg 15898224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 7871405 - 7871344
Alignment:
Q  438 tttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttgaattgga 499  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||| || |||||||    
T  7871405 tttatcaactattggtgtatttttctttatcataaatgtaaagtagaatatattaaattgga 7871344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 355 - 503
Target Start/End: Complemental strand, 35988808 - 35988661
Alignment:
Q  355 ttttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtg 454  Q
    |||||| ||||||||||  ||||||||||  |||||||||||| | |||||||||||  ||||||||||| ||||||| ||   || |||| ||||||||    
T  35988808 ttttaaatgaacctttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtg-tgttgtcaagtattggtg 35988710  T
Q  455 tatttttctttagcataaatacaaagtagaatatgttgaattggaagtg 503  Q
     |||  |  ||| ||||||| |||||| |||||| ||||||||| ||||    
T  35988709 cattcattcttatcataaatgcaaagttgaatatattgaattgggagtg 35988661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 42575591 - 42575718
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    ||||||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||| |||  ||   || |||||||||||| | |  || ||||||    
T  42575591 tcatttcacacatattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgctcttggtaagtattggtgtattctccactatcataaa 42575689  T
Q  474 tacaaagtagaatatgttgaattggaagt 502  Q
    | |||||| |||||| |||||||||||||    
T  42575690 tgcaaagtggaatatattgaattggaagt 42575718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 498
Target Start/End: Original strand, 4044433 - 4044553
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||||||  |||||||||| |||||||| ||||| | | | ||||| | |||| ||||| |||||||| |||||||| ||| ||||||| |||||||     
T  4044433 atttcacacagattaagaaaa-gtgtataaatgaaaagaaaaaaaaaa-gattttgaatgcttttatcaagtattggtgcattcttctttatcataaatg 4044530  T
Q  476 caaagtagaatatgttgaattgg 498  Q
     |||||||||||| |||||||||    
T  4044531 taaagtagaatatattgaattgg 4044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 497
Target Start/End: Original strand, 6172926 - 6173055
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||   |||| |||||| ||||||| |||  ||||||| ||||  || ||||  | |||    
T  6172926 cttttcctcatttcacacttattaagaaaaa-tgtattagtgaagaagagataaaaatagttttaagtgctcttatcaaatattaatgcatttaccatta 6173024  T
Q  467 gcataaatacaaagtagaatatgttgaattg 497  Q
     ||||||| ||||||| ||||| ||||||||    
T  6173025 tcataaatgcaaagtataatatattgaattg 6173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 7311128 - 7311254
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttcttta 466  Q
    ||||| || |||||| ||||||||||||||| ||||| | | ||||  |||||||||||||||||| |||  ||||||| |||| ||| ||||  | |||    
T  7311128 cttttactgatttcatacttattaagaaaaa-tgtattaataaaag--agagaaaaatggttttaagtgctcttatcaagtatttgtgcatttaccatta 7311224  T
Q  467 gcataaatacaaagtagaatatgttgaatt 496  Q
     ||||||| ||||||||||||| |||||||    
T  7311225 tcataaatgcaaagtagaatatattgaatt 7311254  T

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Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 503
Target Start/End: Original strand, 36006849 - 36006973
Alignment:
Q  375 catttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaat 474  Q
    ||||||||||  ||||||||||| ||||||| | |||| ||||   |||||||||||| || |||| |||| |||| ||| ||| ||||||| |||||||    
T  36006849 catttcacacagattaagaaaaa-tgtataaataaaagagaga---aaatggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaat 36006944  T
Q  475 acaaagtagaatatgttgaattggaagtg 503  Q
      ||||||||||||  |||||||||||||    
T  36006945 gtaaagtagaatatactgaattggaagtg 36006973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 344 - 417
Target Start/End: Original strand, 6629318 - 6629391
Alignment:
Q  344 cctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 417  Q
    ||||| |||||||||| |||| ||||||  || |||||||| |||||||||||||||||||| |||||| ||||    
T  6629318 cctccgtcccattttatctgagcctttttttcttttcacacatattaagaaaaagtgtataaatgaaagagaga 6629391  T

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Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 493
Target Start/End: Complemental strand, 35667073 - 35666922
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| |||| |||||| ||||| |||  ||||  ||||||||||| ||||||||||||| | ||| | ||||  |||||||||||| ||||||| ||| |    
T  35667073 tactccctctctcccaatttaagtgagtctttcactcatttcacatttattaagaaaaatt-tattattgaa--ggagagaaaaatagttttaagtgctt 35666977  T
Q  439 ttatcaactattggtgtatttttctttagcataaatacaaagtagaatatgttga 493  Q
    || | || |||||||| ||||  | |||  |||||||||||||||||||| ||||    
T  35666976 ttcttaagtattggtgcatttaccattattataaatacaaagtagaatatattga 35666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 22983134 - 22983076
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaa 397  Q
    |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  22983134 tactccctccgtcccattttaactaaacattttgttcatttcacacatattaagaaaaa 22983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 792168 - 792095
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaag 412  Q
    ||||||||| |||||||| ||| ||| | ||||||||||||||||  ||||||||| | |||||||||| ||||    
T  792168 tacttcctctctcccattataagtgagcattttgctcatttcacatatattaagaatatgtgtataagtaaaag 792095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 41594795 - 41594878
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggt 453  Q
    ||||||||||||| || |||||||||||| | |||||||||| | |||||||||||  |||||||||  ||| |||| |||||||    
T  41594795 tttgctcatttcatacatattaagaaaaa-tatataagtgaatgagagagaaaaataattttaaatgtttttgtcaagtattggt 41594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 858495 - 858433
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||||||| |||||||||||| ||||||| | || | |||| ||||||||||||||    
T  858495 tttgctcatttcacacatattaagaaaaa-tgtataaataaaggagagaaaaaaatggttttaa 858433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 3725342 - 3725284
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||| |||||||||||| |||||||  ||| | |||||||||||||||||||    
T  3725342 ctcatttcacacatattaagaaaaa-tgtataaaggaaggagagagaaaaatggttttaa 3725284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 15898668 - 15898605
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgta 402  Q
    |||| ||||| ||||||||||| |||  |||| | |||||||||||||||||||||||| ||||    
T  15898668 tactccctccgtcccattttaaatgagtctttagttcatttcacacttattaagaaaaaatgta 15898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 25344692 - 25344742
Alignment:
Q  373 ctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaat 424  Q
    |||||||||||| || ||||||||| |||||||||||||| |||||||||||    
T  25344692 ctcatttcacacatactaagaaaaa-tgtataagtgaaagagagagaaaaat 25344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 35012812 - 35012851
Alignment:
Q  385 ttattaagaaaaagtgtataagtgaaagggagagaaaaat 424  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  35012812 ttattaagaaaaagtgtataagtgaaagagaaagaaaaat 35012851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 488
Target Start/End: Complemental strand, 35968857 - 35968762
Alignment:
Q  393 aaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaatacaaagtagaatat 488  Q
    ||||||||||||| |||||| || |||||||| ||||| | || |||| |||| |||| ||  ||| |||||||  ||||||| ||||||||||||    
T  35968857 aaaaagtgtataaatgaaagagaaagaaaaatagttttgagtgtctttgtcaagtattagtacattcttctttattataaatataaagtagaatat 35968762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 42211489 - 42211427
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    |||||||||||||||| |||||| ||||| ||||||| |||| | | |||||||||||||||||    
T  42211489 tttgctcatttcacacatattaa-aaaaaatgtataaatgaaggtgggagaaaaatggttttaa 42211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 39212500 - 39212550
Alignment:
Q  367 cttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggaga 417  Q
    |||||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  39212500 cttttgttcatttcacgcatattaagaaaaattgtataagtgaaagagaga 39212550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 33988360 - 33988232
Alignment:
Q  369 tttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagc 468  Q
    ||||||||  |||||| |||||||| ||| ||||||| |||| | || |||||||||||||||| ||  ||| | || |||||||||||| | |  || |    
T  33988360 tttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtgtattctccactatc 33988262  T
Q  469 ataaatacaaagtagaatatgttgaattgg 498  Q
    ||||||  ||||| |||||| |||||||||    
T  33988261 ataaatgtaaagtggaatatattgaattgg 33988232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 742 - 598
Alignment:
Q  352 ccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattg 451  Q
    ||||||||||||| |  || | |||||| ||| |||||||||||||||||||||||||||  ||||||||| ||||||| | || | |||||||||||||    
T  742 ccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattg 644  T
Q  452 gtgtatttttctttagcataaatacaaagtagaatatgttgaattg 497  Q
    ||| ||| ||||||| ||||||| |||||||||||||  |||||||    
T  643 gtgcattcttctttatcataaatccaaagtagaatataatgaattg 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 350 - 496
Target Start/End: Original strand, 10717 - 10864
Alignment:
Q  350 tcccattttaactgaaccttttgctcatttcacacttattaagaaaaag-tgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaacta 448  Q
    |||||||||||||||  | || |||||||||||| |||||||||||||  ||| |||||||||| ||||||||||||| ||| | || | ||||||||||    
T  10717 tcccattttaactgagtcattggctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaacta 10816  T
Q  449 ttggtgtatttttctttagcataaatacaaagtagaatatgttgaatt 496  Q
    |||||  ||| ||||||| ||||||| ||||||| ||||| |||||||    
T  10817 ttggttcattcttctttatcataaatgcaaagtaaaatatattgaatt 10864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 339 - 463
Target Start/End: Original strand, 7838 - 7960
Alignment:
Q  339 tacttcctccctcccattttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcct 438  Q
    |||| ||||| ||| ||||||| ||| || ||  ||||||||||| ||||||||||||| ||||||| |||||  |||||||||||  |||| | |||||    
T  7838 tactccctccgtcctattttaattgagcccttgactcatttcacatttattaagaaaaaatgtataaatgaaa--gagagaaaaattattttgagtgcct 7935  T
Q  439 ttatcaactattggtgtatttttct 463  Q
    |||||||||||||||| ||||||||    
T  7936 ttatcaactattggtgcatttttct 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 372 - 496
Target Start/End: Original strand, 12385 - 12509
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||| ||||||||||||  |||||| |||||| ||| ||| ||||||||| | || |||| |||| |||| ||| ||| |||||||  |||    
T  12385 gctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattata 12484  T
Q  472 aatacaaagtagaatatgttgaatt 496  Q
    |||  |||||||||||| |||||||    
T  12485 aatgtaaagtagaatatattgaatt 12509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 98997 - 98923
Alignment:
Q  357 ttaactgaaccttttgctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaa 432  Q
    ||||||||||| |||| ||||||||||| |||||||||||| ||||||| |||| | |||||||||||| ||||||    
T  98997 ttaactgaaccatttgttcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaaaatgattttaa 98923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 498
Target Start/End: Original strand, 352415 - 352536
Alignment:
Q  374 tcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaa 473  Q
    |||||||||||  |||||||||| |||||||| | ||||  ||||||||||  |||| | || |||| | || |||||||| ||| ||||||| ||||||    
T  352415 tcatttcacacagattaagaaaa-gtgtataaataaaag--agagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaa 352511  T
Q  474 tacaaagtagaatatgttgaattgg 498  Q
    |  |||||||||||| |||||||||    
T  352512 tgtaaagtagaatatattgaattgg 352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 422
Target Start/End: Complemental strand, 4484 - 4438
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaa 422  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  4484 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 372 - 489
Target Start/End: Original strand, 9503 - 9618
Alignment:
Q  372 gctcatttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcata 471  Q
    ||||||||||||  ||||||||||||  |||||| |||| | ||||||||||||||||||| |||  || | || ||||  |||||| | | ||| ||||    
T  9503 gctcatttcaca--tattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatgtattctccattatcata 9600  T
Q  472 aatacaaagtagaatatg 489  Q
    ||| |||||| |||||||    
T  9601 aatgcaaagtggaatatg 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 497
Target Start/End: Complemental strand, 5969 - 5851
Alignment:
Q  376 atttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||||||||  |||||||||| |||||||| | ||||  ||||||||||| | || | || ||||||||| ||||| || |||  |||||| |||||||     
T  5969 atttcacacaaattaagaaaa-gtgtataaataaaag--agagaaaaatgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatg 5873  T
Q  476 caaagtagaatatgttgaattg 497  Q
     |||||||||||| ||||||||    
T  5872 taaagtagaatatattgaattg 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 409 - 475
Target Start/End: Complemental strand, 158134 - 158068
Alignment:
Q  409 aaagggagagaaaaatggttttaaatgcctttatcaactattggtgtatttttctttagcataaata 475  Q
    |||| ||||||||||||||||| |||| | ||||||||||||| ||| || ||||||  ||||||||    
T  158134 aaagagagagaaaaatggttttgaatgtccttatcaactattgatgttttcttctttgtcataaata 158068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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