View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19032_low_36 (Length: 209)

Name: NF19032_low_36
Description: NF19032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19032_low_36
NF19032_low_36
[»] chr6 (5 HSPs)
chr6 (62-196)||(22517002-22517134)
chr6 (62-191)||(4792688-4792815)
chr6 (62-196)||(2173464-2173590)
chr6 (94-196)||(29873501-29873601)
chr6 (94-196)||(2018030-2018130)
[»] chr3 (12 HSPs)
chr3 (62-196)||(17256989-17257121)
chr3 (62-193)||(55094150-55094279)
chr3 (62-196)||(5635755-5635887)
chr3 (62-196)||(50380489-50380621)
chr3 (94-196)||(35494700-35494798)
chr3 (94-196)||(33446789-33446889)
chr3 (94-193)||(51225380-51225477)
chr3 (94-196)||(49002118-49002218)
chr3 (94-193)||(36316842-36316939)
chr3 (62-130)||(2182313-2182381)
chr3 (94-193)||(32771614-32771711)
chr3 (113-196)||(10730789-10730870)
[»] chr5 (4 HSPs)
chr5 (62-196)||(26365591-26365723)
chr5 (62-193)||(38973817-38973946)
chr5 (94-196)||(38163234-38163334)
chr5 (94-196)||(4887842-4887942)
[»] chr2 (7 HSPs)
chr2 (62-196)||(44078052-44078184)
chr2 (62-196)||(23048692-23048823)
chr2 (62-196)||(21632202-21632334)
chr2 (94-196)||(11364282-11364382)
chr2 (94-196)||(8667134-8667234)
chr2 (62-193)||(28732763-28732885)
chr2 (96-196)||(43890562-43890660)
[»] chr7 (3 HSPs)
chr7 (63-191)||(30504061-30504187)
chr7 (94-196)||(24279125-24279225)
chr7 (94-196)||(42437529-42437630)
[»] chr1 (9 HSPs)
chr1 (70-196)||(50877393-50877517)
chr1 (94-196)||(49695816-49695916)
chr1 (62-196)||(7057329-7057455)
chr1 (94-193)||(21259564-21259660)
chr1 (94-196)||(4475762-4475862)
chr1 (102-196)||(51548817-51548909)
chr1 (94-196)||(39277418-39277518)
chr1 (123-196)||(50503889-50503962)
chr1 (94-132)||(50503830-50503868)
[»] chr4 (9 HSPs)
chr4 (62-193)||(6033440-6033569)
chr4 (62-192)||(29775715-29775843)
chr4 (96-196)||(38828948-38829046)
chr4 (62-196)||(51543338-51543467)
chr4 (62-192)||(1139494-1139635)
chr4 (94-196)||(33167626-33167726)
chr4 (94-196)||(8143938-8144038)
chr4 (94-192)||(53060810-53060906)
chr4 (94-130)||(44271557-44271593)
[»] chr8 (5 HSPs)
chr8 (94-196)||(8951775-8951875)
chr8 (94-196)||(12279849-12279949)
chr8 (62-189)||(42074821-42074944)
chr8 (94-192)||(45309182-45309278)
chr8 (125-191)||(8348616-8348682)
[»] scaffold0286 (1 HSPs)
scaffold0286 (62-196)||(20450-20577)
[»] scaffold0854 (1 HSPs)
scaffold0854 (94-185)||(2888-2977)


Alignment Details
Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 22517134 - 22517002
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| |||| |||||    
T  22517134 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctc--tctcgtatttgaattgtaaccaaaaacacgagg 22517037  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    || ||||||| ||||||||||||||||||||||||    
T  22517036 aattaaagtgacattctaatttttcaaacacaggt 22517002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 4792688 - 4792815
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| ||| ||| ||||||||||||| |||||    
T  4792688 caaaatcctttgttccaaaatcttgaagttttatcaccaccgtagatttgctccgattgaa--tctctctcgtattcgaactgtaaccagaaacacgagg 4792785  T
Q  162 aagtaaagtggcattctaatttttcaaaca 191  Q
    ||||||||||||||||||||||||||||||    
T  4792786 aagtaaagtggcattctaatttttcaaaca 4792815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 2173590 - 2173464
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| | |||    
T  2173590 caaaaccctttgttccaaaatcttgaag------caccaccatggatttgcttcgattgaatctctctc--gtatttgaattgtaaccagaaacacaagg 2173499  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||||||||||||||||||||||||| ||||    
T  2173498 aagtaaagtggcattctaatttttcaaacagaggt 2173464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 29873501 - 29873601
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  29873501 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtgacattctaattttttaaacaca 29873598  T
Q  194 ggt 196  Q
    |||    
T  29873599 ggt 29873601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 2018130 - 2018030
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||| ||||||||||||||  | ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  2018130 atcaccaccatggatttgctccaattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtgacattttaatttttcaaacaca 2018033  T
Q  194 ggt 196  Q
    |||    
T  2018032 ggt 2018030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 17256989 - 17257121
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||| |||  |||||||||||||||| |||||    
T  17256989 caaaaccctttgttccaaaatcttgaagctttatcaccaccatggatttgctccgattgaa--tctctctcgtattcaaattgtaaccagaaacacgagg 17257086  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||||||||||||||||||||||||||||||    
T  17257087 aagtaaagtggcattctaatttttcaaacacaggt 17257121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 55094279 - 55094150
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||| |||||    
T  55094279 caaaatcctttgttccaaaatcttgaagctttatcaccaccatggatttgctccgattgaatctc--tctcgtattcgaattgtaaccagaaacacgagg 55094182  T
Q  162 aagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||| |||||||||||||||||||||    
T  55094181 aagtaaagtgacattctaatttttcaaacaca 55094150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 5635755 - 5635887
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||    
T  5635755 caaaaccctttgttctaaaatcttgaagctttatcaccactatgaatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgagg 5635852  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||||||||||||||||||||||||||||||    
T  5635853 aagtaaagtggcattctaatttttcaaacacaggt 5635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 50380489 - 50380621
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||| ||||||| ||||||||| |||||    
T  50380489 caaaaccctttgttccaaaatcttgaagctttatcaccaccatggatttgctccgattgaa--tatctctcgtattcgaattgtgaccagaaacacgagg 50380586  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||| |||||||||||||||||||||||||||    
T  50380587 aagtaaaatggcattctaatttttcaaacacaggt 50380621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 35494798 - 35494700
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||    | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35494798 atcaccaccatggatttgctccgattgaatctctc----gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 35494703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 33446889 - 33446789
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||| ||||  | ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  33446889 atcaccaccatggatttgctccgattgaatctttctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtgacattctaatttttcaaacaca 33446792  T
Q  194 ggt 196  Q
    |||    
T  33446791 ggt 33446789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 51225380 - 51225477
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  51225380 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaaataaagtgtcattctaatttttcaaacaca 51225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 49002118 - 49002218
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||    
T  49002118 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaactaaaaacacgaggaagtaaagtgacattctaatttttcaaacaca 49002215  T
Q  194 ggt 196  Q
    |||    
T  49002216 ggt 49002218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 36316939 - 36316842
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||    
T  36316939 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaatctgaaacacgagaaagtaaagtggcattctaatttttcaaacaca 36316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 2182381 - 2182313
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctc 130  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  2182381 caaaaccctttgttccaaaatcttgaagctttatcaccaccatggatttgctccgattaaatctctctc 2182313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 32771711 - 32771614
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||| ||||||| |||||||| |||||||||||||||    ||| ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||    
T  32771711 atcaacaccatgaatttgctctgattgaatctctctcat--attcgaattgtaaccagaatcacgaggaagtaaagtgacattctaattttttaaacaca 32771614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 10730789 - 10730870
Alignment:
Q  113 tccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||||||||||||||  | |||  |||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  10730789 tccgattgaatctctctc--gtattcaaattttaaccaaaaacacgaggaagtaaagtggaattctaatttttcaaacacaggt 10730870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 26365723 - 26365591
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||| ||| ||||||||||||||||| |||||    
T  26365723 caaaaccctttgttccaaaatcttgaagttttatcaccgccatggatttgctcccattgaatctc--tctcgtattcgaattgtaaccagaaacacgagg 26365626  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||||| ||||||||||||||||||||||||    
T  26365625 aagtaaagtgacattctaatttttcaaacacaggt 26365591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 38973817 - 38973946
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||   |||    
T  38973817 caaaatcctttgttccaaaatcttgaagctttatcaccaccatggatttgctccgattgaa--tctctctcgtattcgaattgtaaccagaaacataagg 38973914  T
Q  162 aagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||| |||||||||||||||||||||    
T  38973915 aagtaaagtgacattctaatttttcaaacaca 38973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 38163334 - 38163234
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  38163334 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaaatggcattctaatttttcaaacaca 38163237  T
Q  194 ggt 196  Q
    |||    
T  38163236 ggt 38163234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 4887842 - 4887942
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||||||||||||||||||||||||||||| |||||  | ||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  4887842 atcaccaccatggatttgctccgattgaatcactctc--gtattcgaattgtaaccagaaacacgaggaagtgaagtgacattctaatttttcaaacaca 4887939  T
Q  194 ggt 196  Q
    |||    
T  4887940 ggt 4887942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 44078184 - 44078052
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  | ||||||| ||| ||||||||||||||||| |||||    
T  44078184 caaaaccctttgttccaaaatcttgaagttttatcaccaccgtggatttgctcccattgaa--tttctctcgtattcgaattgtaaccagaaacacgagg 44078087  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||||||||||| |||||||||||||||||||    
T  44078086 aagtaaagtggcattataatttttcaaacacaggt 44078052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 23048692 - 23048823
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    | |||  ||||||||| |||||| |||||    
T  23048692 caaaaccctttgttccaaaatcttgaagttttatcaccaccatgaatttgctccgattgaatctctcag--gtattcaaattgtaac-agaaacacgagg 23048788  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||| ||||||||||||||||||||||||||    
T  23048789 aagtaaagcggcattctaatttttcaaacacaggt 23048823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 21632202 - 21632334
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||||| || ||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||  | ||| |||||||||||| |||| |||||    
T  21632202 caaaaccattcgttccaaaatcttgaagctcaatcaccaccatggatttgctccgattgaatctctttc--gtattcgaattgtaaccaaaaacacgagg 21632299  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||||||||||||||||||||||||| |||||    
T  21632300 aagtaaagtggcattctaatttttcaaactcaggt 21632334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 11364282 - 11364382
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  11364282 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaatcaca 11364379  T
Q  194 ggt 196  Q
    |||    
T  11364380 ggt 11364382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 8667234 - 8667134
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||| ||||||||||||||| |||||||||||||||  | |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8667234 atcactaccatggatttgctctgattgaatctctctc--gtattctaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 8667137  T
Q  194 ggt 196  Q
    |||    
T  8667136 ggt 8667134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 28732885 - 28732763
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||||| ||||      | ||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||    
T  28732885 caaaaccctttgttccaaaatcttgaagcttta------caatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgagg 28732794  T
Q  162 aagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||||||||| ||||| ||||||||||||||    
T  28732793 aagtaaagtggtattct-atttttcaaacaca 28732763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 43890562 - 43890660
Alignment:
Q  96 caccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacacagg 195  Q
    ||||||||||||||||||  |||||||||||||||  | ||| ||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||    
T  43890562 caccaccatggatttgctttgattgaatctctctc--gtattcgaattgtaacctgaaacacggggaagtaaagtgacattctaatttttcaaacacagg 43890659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 4e-46; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 30504061 - 30504187
Alignment:
Q  63 aaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagga 162  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||| | ||||    
T  30504061 aaaaccctttgttccaaaattttgaagctttatcaccaccatggatttgctccgattgaa--tctctctcgtattcgaattgtaaccagaaacacaagga 30504158  T
Q  163 agtaaagtggcattctaatttttcaaaca 191  Q
    |||||||||||||||||||||||||||||    
T  30504159 agtaaagtggcattctaatttttcaaaca 30504187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 24279225 - 24279125
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||||||||||||||||||||||||||||| |||||  | ||| ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  24279225 atcaccaccatggatttgctccgattgaatccctctc--gtattcgaattgtaaccagaaacacaaggaagtaaagtgacattctaatttttcaaacaca 24279128  T
Q  194 ggt 196  Q
    |||    
T  24279127 ggt 24279125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 42437630 - 42437529
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggca-ttctaatttttcaaacac 192  Q
    ||||||||||||||||||| ||||||||| |||||||  | ||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  42437630 atcaccaccatggatttgcaccgattgaacctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcatttctaatttttcaaacac 42437533  T
Q  193 aggt 196  Q
    ||||    
T  42437532 aggt 42437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 50877517 - 50877393
Alignment:
Q  70 tttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaag 169  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||||    
T  50877517 tttgttctaaaatcttgaagctttatcaccaccatagatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaag 50877420  T
Q  170 tggcattctaatttttcaaacacaggt 196  Q
    || ||||||||||||||||||||||||    
T  50877419 tgacattctaatttttcaaacacaggt 50877393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 49695816 - 49695916
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||| ||||||||||  | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49695816 atcaccaccatggatttgctccgattaaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 49695913  T
Q  194 ggt 196  Q
    |||    
T  49695914 ggt 49695916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 7057329 - 7057455
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||||| ||||||||||||||||||||      |||| ||||||||||||||||||||||||||||||  | ||| |||||||||||| |||| |||||    
T  7057329 caaaaccatttgttccaaaatcttgaag------caccgccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccaaaaacacgagg 7057420  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    | ||||||||| |||||||||||||||||||||||    
T  7057421 aggtaaagtggtattctaatttttcaaacacaggt 7057455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 21259660 - 21259564
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  21259660 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccataaacacgaggaagtaaagtggcattctaa-ttttcaaacaca 21259564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 4475862 - 4475762
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||| |||||||||||||||||||||||||||||||  | ||| ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  4475862 atcactaccatggatttgctccgattgaatctctctc--gtattcgaattctaaccagaaacacgaagaagtaaagtgacattctaatttttcaaacaca 4475765  T
Q  194 ggt 196  Q
    |||    
T  4475764 ggt 4475762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 51548817 - 51548909
Alignment:
Q  102 catggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||||||||||||||||||||||||  | ||| |||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  51548817 catggatttgctccgattgaatctctctc--gtattcgaattgtaactagaaacacgaggaggtaaagtggcattctaatttttcaaacacaggt 51548909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 39277418 - 39277518
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||||| |||||||||||| ||||||||||||||||    ||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  39277418 atcaccaacatggatttgctacgattgaatctctctcct--attcgaattgtaaccataaacacgaggaagtaaagtgacattctaatttttcaaacaca 39277515  T
Q  194 ggt 196  Q
    |||    
T  39277516 ggt 39277518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 50503889 - 50503962
Alignment:
Q  123 tctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  50503889 tctctctctcgtattcgaattgtaaccagaaacacgaggaagtaaaatggcattctaatttttcaaacacaggt 50503962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 50503830 - 50503868
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctc 132  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50503830 atcaccaccatggatttgctccgattgaatctctctctc 50503868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 6033569 - 6033440
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||  ||||    
T  6033569 caaaatcctttgttccaaaaacttgaagctttatcaccaccatggatttgctccgattgaatctc--tctcgtattcgaattgtaaccagaaacaggagg 6033472  T
Q  162 aagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||| |||| |||| |||||||||||    
T  6033471 aagtaaagtgacattttaatgtttcaaacaca 6033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 29775715 - 29775843
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||| ||||||||||||||||||||| |||||||||||| | |||||| || |||||||||||||||  |  |||||||||| ||||||||| |||||    
T  29775715 caaaacactttgttccaaaatcttgaagctttatcaccaccgtagatttgttctgattgaatctctctc--gtttttgaattgttaccagaaacacgagg 29775812  T
Q  162 aagtaaagtggcattctaatttttcaaacac 192  Q
    |||||||||||||||||||||||||||||||    
T  29775813 aagtaaagtggcattctaatttttcaaacac 29775843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 38828948 - 38829046
Alignment:
Q  96 caccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacacagg 195  Q
    |||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  38828948 caccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattttaatttttcaaacacagg 38829045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 51543338 - 51543467
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||    | ||| |||||||||||| |||| |||||    
T  51543338 caaaaccctttgttccaaaatcttgaggctctatcac-accatggatttgctccgattgaatctctc----gtattcgaattgtaaccaaaaacacgagg 51543432  T
Q  162 aagtaaagtggcattctaatttttcaaacacaggt 196  Q
    |||||||| ||||||||||||||||||||| ||||    
T  51543433 aagtaaaggggcattctaatttttcaaacaaaggt 51543467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 1139494 - 1139635
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagtttt-------------atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaac 148  Q
    ||||||||||||||||||||||||||||||||             |||||||||||||||||||| ||||||||||||||||  | ||||||||||||||    
T  1139494 caaaaccctttgttccaaaatcttgaagttttctgccactgcttcatcaccaccatggatttgcttcgattgaatctctctc--gtatttgaattgtaac 1139591  T
Q  149 cagaaactcgaggaagtaaagtggcattctaatttttcaaacac 192  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  1139592 cagaaacatgaggaagtaaagtggcattctaatttttcaaacac 1139635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 33167726 - 33167626
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    ||||||||||||||||||||| |||| ||||||||||  | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33167726 atcaccaccatggatttgctctgattaaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 33167629  T
Q  194 ggt 196  Q
    |||    
T  33167628 ggt 33167626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 8144038 - 8143938
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||| ||||||||||||||  | |||  |||||||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  8144038 atcaccaccatggatttgctccaattgaatctctctc--gtattcaaattgtaaccagaaacacgaggaagtaaagtggcattctaattttccaaaaaca 8143941  T
Q  194 ggt 196  Q
    |||    
T  8143940 ggt 8143938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 53060810 - 53060906
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacac 192  Q
    ||||||||||||||||||||||||| ||||| |||||  | |||  |||||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  53060810 atcaccaccatggatttgctccgatcgaatcactctc--gtattcaaattgtaaccagaaacacgaggaagtaaagtgacattgtaatttttcaaacac 53060906  T

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Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 44271593 - 44271557
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctc 130  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44271593 atcaccgccatggatttgctccgattgaatctctctc 44271557  T

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Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 8951775 - 8951875
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8951775 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 8951872  T
Q  194 ggt 196  Q
    |||    
T  8951873 ggt 8951875  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 12279949 - 12279849
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacaca 193  Q
    |||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12279949 atcaccaccacggatttgctccgattgaatctctctc--gtatttgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacaca 12279852  T
Q  194 ggt 196  Q
    |||    
T  12279851 ggt 12279849  T

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Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 42074944 - 42074821
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgagg 161  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    ||||| ||| ||||||| ||||||||| |||||    
T  42074944 caaaaccctttgttccaaaatcttaaagctttatcaccaccatggatttgctctgattgaatc----tctcgtattcgaattgtgaccagaaacacgagg 42074849  T
Q  162 aagtaaagtggcattctaatttttcaaa 189  Q
    ||||||||||||||||| ||||||||||    
T  42074848 aagtaaagtggcattctgatttttcaaa 42074821  T

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Target: chr8; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 45309278 - 45309182
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaacac 192  Q
    |||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45309278 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaaccagaaacacgaggaagtaaagtggcattctaatttttcaaacac 45309182  T

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Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 8348682 - 8348616
Alignment:
Q  125 tctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaatttttcaaaca 191  Q
    |||||| || ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  8348682 tctctcacgtattcgaattgtaaccagatacacgaggaagtaaagtggcattctaatttttcaaaca 8348616  T

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Target: scaffold0286 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 20450 - 20577
Alignment:
Q  62 caaaaccctttgttccaaaatcttgaagttttatcaccaccatggatttgc-tccgattgaatctctctctcgcatttgaattgtaaccagaaactcgag 160  Q
    ||||||||||||||||||||||||||||      |||||||||||||| || |||  |||||||||||||  | ||||||||||||||||||||| | ||    
T  20450 caaaaccctttgttccaaaatcttgaag------caccaccatggattcgcgtccacttgaatctctctc--gtatttgaattgtaaccagaaacacaag 20541  T
Q  161 gaagtaaagtggcattctaatttttcaaacacaggt 196  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20542 gaagtaaagtggcattctaatttttcaaacagaggt 20577  T

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Target: scaffold0854 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 2977 - 2888
Alignment:
Q  94 atcaccaccatggatttgctccgattgaatctctctctcgcatttgaattgtaaccagaaactcgaggaagtaaagtggcattctaattttt 185  Q
    |||||||||||||||||||||||||||||||||||||  | ||| |||||||||| |||||  ||||||||||||||| |||||||||||||    
T  2977 atcaccaccatggatttgctccgattgaatctctctc--gtattcgaattgtaactagaaagacgaggaagtaaagtgacattctaattttt 2888  T

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