View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19034_high_4 (Length: 397)
Name: NF19034_high_4
Description: NF19034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19034_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 60 - 381
Target Start/End: Original strand, 32041715 - 32042036
Alignment:
| Q |
60 |
gacttattttgtagctactaccactcacatgccctaagacctgtcatccttctccaattgcaccatcttcatattaatttccttcattttctcatcaacc |
159 |
Q |
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| T |
32041715 |
gacttattttgtagctactaccactcacatgccctaagacctctcatccttctccaattgcaccatcttcatattaatttccttcattttctcatcaacc |
32041814 |
T |
|
| Q |
160 |
acatatgtgagatcattcatatctgaagtgcttaaatcctcaggaacattccctgcctcaagatagtgatgcaattgaacactcatccacatcatcctat |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32041815 |
acatatgtgagatcattcatatctgaagtgcttaaatcctcaggaacattccctgcctcaagatagtgatgcaattgaacactcatccacatcatcctat |
32041914 |
T |
|
| Q |
260 |
tctccttcannnnnnncttcaacttctcattcaacttttggatcctttccttcaagtaactctcatggtcgaacatctttcggtctcgatcgaagttcgg |
359 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32041915 |
tctccttcatttttttcttcaacttctcattcaacttttggatcctttccttcaagtaactctcatggtcgaacatctttcggtctcgatcgaagttcgg |
32042014 |
T |
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| Q |
360 |
agtctgcatgaatcgaaccagc |
381 |
Q |
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|||||||||||||||||||||| |
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| T |
32042015 |
agtctgcatgaatcgaaccagc |
32042036 |
T |
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