View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19034_high_6 (Length: 297)
Name: NF19034_high_6
Description: NF19034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19034_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 280
Target Start/End: Complemental strand, 44186232 - 44185955
Alignment:
| Q |
13 |
aatattttcacgaaatgggatatcagttagtgattgtaaaattgaaattaattatgaccattaatttcaatttatttttgaagagatgt----------- |
101 |
Q |
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| T |
44186232 |
aatattttcacgaaatgggatagca-ttagtgattgtaaaattgaaattaattatgaccattaatttcaatttatttttgaagagatgttttcaaaatgt |
44186134 |
T |
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| Q |
102 |
caagttggttttcaatatgtgaaggattaaattggattacatgttgtcaatttttatgtgaagtcatacagtcaataaattgataatcgttgatcttgat |
201 |
Q |
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| T |
44186133 |
caagttggttttcaatatgtgaaggattaaattggattacatgttgtcaatttttatgtgaagtcatacggtcaatatattgataatcgttgatcttgat |
44186034 |
T |
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| Q |
202 |
cggacgatccataaaatacatatgttaattttagatcggacaatcttgctatttgtttattcagatcttatctaatagc |
280 |
Q |
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| T |
44186033 |
cggacgatccataaaatacatatgttaattttagatcggacaatcttgctatttgtttattcagatcttatctaatagc |
44185955 |
T |
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