View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19034_high_9 (Length: 207)

Name: NF19034_high_9
Description: NF19034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19034_high_9
NF19034_high_9
[»] chr2 (7 HSPs)
chr2 (1-92)||(39812186-39812276)
chr2 (1-92)||(32246579-32246671)
chr2 (1-73)||(19344236-19344307)
chr2 (1-73)||(19349094-19349165)
chr2 (1-92)||(44312822-44312908)
chr2 (9-46)||(11099143-11099180)
chr2 (10-46)||(14291331-14291367)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-92)||(34147-34237)
[»] chr8 (12 HSPs)
chr8 (1-92)||(39785022-39785112)
chr8 (1-92)||(25328476-25328566)
chr8 (8-71)||(10684470-10684533)
chr8 (8-71)||(35745208-35745271)
chr8 (1-66)||(6311121-6311184)
chr8 (1-42)||(7290125-7290166)
chr8 (9-46)||(30655484-30655521)
chr8 (9-46)||(33038023-33038060)
chr8 (9-46)||(36979221-36979258)
chr8 (8-46)||(4760291-4760329)
chr8 (8-46)||(10689358-10689396)
chr8 (8-46)||(18853384-18853422)
[»] chr1 (8 HSPs)
chr1 (1-92)||(41386545-41386635)
chr1 (4-92)||(41398034-41398121)
chr1 (1-92)||(44024071-44024161)
chr1 (1-92)||(25445288-25445380)
chr1 (1-92)||(39445294-39445386)
chr1 (1-71)||(1055210-1055279)
chr1 (1-71)||(43988664-43988734)
chr1 (8-46)||(24787583-24787621)
[»] chr6 (12 HSPs)
chr6 (2-92)||(28184299-28184388)
chr6 (1-92)||(14737775-14737864)
chr6 (1-92)||(14742634-14742723)
chr6 (1-92)||(11856767-11856858)
chr6 (1-92)||(22010895-22010981)
chr6 (8-71)||(6005234-6005297)
chr6 (8-71)||(33336149-33336212)
chr6 (5-71)||(6438319-6438383)
chr6 (1-102)||(28155769-28155869)
chr6 (8-71)||(16838561-16838624)
chr6 (8-71)||(33330652-33330715)
chr6 (8-71)||(5343297-5343360)
[»] chr4 (11 HSPs)
chr4 (1-92)||(3813818-3813910)
chr4 (1-92)||(5732460-5732548)
chr4 (1-92)||(45348016-45348107)
chr4 (1-92)||(45357495-45357586)
chr4 (1-92)||(9224605-9224696)
chr4 (1-71)||(18855544-18855613)
chr4 (1-92)||(9229392-9229482)
chr4 (3-92)||(56146912-56146993)
chr4 (1-66)||(51520280-51520343)
chr4 (9-46)||(24741784-24741821)
chr4 (11-46)||(29760486-29760521)
[»] chr3 (12 HSPs)
chr3 (1-92)||(18656230-18656318)
chr3 (1-92)||(22173393-22173482)
chr3 (1-73)||(2677286-2677358)
chr3 (8-71)||(32475301-32475364)
chr3 (7-73)||(2673136-2673202)
chr3 (8-71)||(32480158-32480222)
chr3 (8-71)||(10207750-10207813)
chr3 (1-71)||(8512032-8512102)
chr3 (1-71)||(8516912-8516982)
chr3 (8-46)||(2671802-2671840)
chr3 (8-46)||(7167088-7167126)
chr3 (10-46)||(40373013-40373049)
[»] chr7 (14 HSPs)
chr7 (1-92)||(24024526-24024616)
chr7 (1-92)||(31109781-31109870)
chr7 (1-73)||(21812437-21812508)
chr7 (1-71)||(19992130-19992199)
chr7 (1-92)||(12396712-12396798)
chr7 (1-72)||(12406149-12406218)
chr7 (8-71)||(16879889-16879952)
chr7 (8-71)||(16884745-16884808)
chr7 (8-71)||(24261529-24261592)
chr7 (8-71)||(24266408-24266471)
chr7 (1-92)||(4866530-4866616)
chr7 (8-46)||(2057802-2057840)
chr7 (8-46)||(20357763-20357801)
chr7 (6-46)||(1533654-1533694)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-92)||(9838-9928)
scaffold0355 (23-92)||(101-169)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-92)||(157-249)
[»] chr5 (17 HSPs)
chr5 (1-92)||(15044486-15044573)
chr5 (1-73)||(28807773-28807844)
chr5 (1-72)||(37561644-37561715)
chr5 (1-68)||(37556822-37556889)
chr5 (8-71)||(2785192-2785255)
chr5 (3-92)||(43598527-43598608)
chr5 (3-92)||(43604019-43604100)
chr5 (3-92)||(43609511-43609592)
chr5 (1-66)||(1457360-1457423)
chr5 (1-92)||(43592082-43592165)
chr5 (8-71)||(31397198-31397261)
chr5 (8-71)||(31402055-31402118)
chr5 (8-71)||(33767996-33768059)
chr5 (8-71)||(33791133-33791196)
chr5 (1-66)||(27444793-27444856)
chr5 (1-66)||(27449637-27449700)
chr5 (1-42)||(30631253-30631294)
[»] scaffold0479 (1 HSPs)
scaffold0479 (3-92)||(13143-13233)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-92)||(35260-35350)
[»] scaffold0197 (2 HSPs)
scaffold0197 (8-71)||(14515-14578)
scaffold0197 (8-71)||(19370-19433)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-71)||(182170-182233)
[»] scaffold0028 (1 HSPs)
scaffold0028 (8-71)||(149161-149224)
[»] scaffold0259 (1 HSPs)
scaffold0259 (23-71)||(2471-2519)
[»] scaffold0978 (1 HSPs)
scaffold0978 (8-46)||(453-491)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 2e-35; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 39812186 - 39812276
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39812186 atttgttctcattgattatcactatcacttgctccacacatctttggtttatt-tcattggtgtgaaggtttctttggaaccggattcacaa 39812276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32246671 - 32246579
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  32246671 atttgttctcatagattaccactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttctttgtagaaccggattcacaa 32246579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19344307 - 19344236
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  19344307 atttgctctcatagattaccactatctcttgctccacacatctttggtttatt-tcattggtgtgaaggtttc 19344236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19349165 - 19349094
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  19349165 atttgctctcatagattaccactatctcttgctccacacatctttggtttatt-tcattggtgtgaaggtttc 19349094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44312822 - 44312908
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||| |   ||| |||||||||||||||    
T  44312822 atttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaagat---ttttgaaccggattcacaa 44312908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 11099143 - 11099180
Alignment:
Q  9 tcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11099143 tcattgattaccactatctcttgctccacacatctttg 11099180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 14291367 - 14291331
Alignment:
Q  10 cattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  14291367 cattgattaccactatctcttgctccacacacctttg 14291331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34147 - 34237
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34147 atttgttctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttctttggaaccggattcacaa 34237  T

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Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 39785022 - 39785112
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  39785022 atttgttctcattgattatcactatcacttgctccacacatctttggtttatt-tcattggtgtgaaggtttctttggaaccagattcacaa 39785112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25328476 - 25328566
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  25328476 atttgttctcattgattatcactatcacttgctccgcacatcattgatttatt-tcattgttgtgaaggtttctttggaaccggattcacaa 25328566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 10684470 - 10684533
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  10684470 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 10684533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 35745271 - 35745208
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  35745271 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtt 35745208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6311184 - 6311121
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtga 66  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  6311184 atttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 6311121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7290125 - 7290166
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatc 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  7290125 atttgttctcattgattaccactatctcttgctccacacatc 7290166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 30655521 - 30655484
Alignment:
Q  9 tcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30655521 tcattgattaccactatctcttgctccacacatctttg 30655484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 33038023 - 33038060
Alignment:
Q  9 tcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  33038023 tcattgattaccactatctcttgctccacacatctttg 33038060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 36979258 - 36979221
Alignment:
Q  9 tcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  36979258 tcattgattaccactatctcttgctccacacatctttg 36979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 4760291 - 4760329
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  4760291 ctcattgattaccactatctctagctccacacatctttg 4760329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 10689358 - 10689396
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  10689358 ctcatagattaccactatctcttgctccacacatctttg 10689396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 18853384 - 18853422
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  18853384 ctcatagattaccactatctcttgctccacacatctttg 18853422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 6e-33; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41386635 - 41386545
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41386635 atttgttctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttctttggaaccggattcacaa 41386545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 41398121 - 41398034
Alignment:
Q  4 tgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    ||||||||||||||| ||||||| ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41398121 tgttctcattgattatcactatcacttgctccacacataattggtttatt-tcattggtgtgaaggtttctttggaaccggattcacaa 41398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44024071 - 44024161
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  44024071 atttgttctcattgattatcactatcagttgctccacacatcattggtttatt-tcattggtgtgaaggtttatttggaatcggattcacaa 44024161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25445288 - 25445380
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||  |||||||||||||||    
T  25445288 atttgttctcattgattatcactatcgcttgctccacacatcattggtttatt-tcattggtgtgaaggttcgtttgtagaaccggattcacaa 25445380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39445386 - 39445294
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||| ||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||  ||||  |||||||||||||||    
T  39445386 atttgttcacattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggttcgtttgtagaaccggattcacaa 39445294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1055210 - 1055279
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    |||||||| ||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  1055210 atttgttcacattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtt 1055279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43988664 - 43988734
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| |||||| ||||| | ||||| ||||||||||||||| ||| |||||||||||||| |||||||||    
T  43988664 atttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggcgtgaaggtt 43988734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 24787583 - 24787621
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  24787583 ctcatttattaccactatctcttgctccacacatctttg 24787621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 28184388 - 28184299
Alignment:
Q  2 tttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  28184388 tttgttctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttgtttgaaaccggattcacaa 28184299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14737775 - 14737864
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| ||||||||||||||| || ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  14737775 atttgttctcattgattatcactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggtttatttgaaaccggattcacaa 14737864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14742634 - 14742723
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| ||||||||||||||| || ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  14742634 atttgttctcattgattatcactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggtttatttgaaaccggattcacaa 14742723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11856858 - 11856767
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg--tttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||  ||| ||| |||||||||||||||    
T  11856858 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggttttttttttgaaccggattcacaa 11856767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22010895 - 22010981
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||| |   ||| |||||||||||||||    
T  22010895 atttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaagat---ttttgaaccggattcacaa 22010981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 6005297 - 6005234
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  6005297 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtt 6005234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 33336149 - 33336212
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  33336149 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtt 33336212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 6438383 - 6438319
Alignment:
Q  5 gttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||    
T  6438383 gttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggtt 6438319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28155769 - 28155869
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg-tttctttggaaccggattcacaagatgttt 99  Q
    ||||| |||||||||||| ||||||| ||||||||||||||| || |||||||  |||||||||||||| ||| ||| ||||||||||||||| || |||    
T  28155769 atttgctctcattgattatcactatcacttgctccacacatcatt-gtttatt-gcattggtgtgaaggttttgtttagaaccggattcacaacatcttt 28155866  T
Q  100 ggt 102  Q
    |||    
T  28155867 ggt 28155869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 16838624 - 16838561
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||| ||| ||||||||||||||||||||||||||||    
T  16838624 ctcatagattatctctatcacttgctccacatatcattggtttattctcattggtgtgaaggtt 16838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 33330652 - 33330715
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  33330652 ctcatagattatctctatcacttgctccacacatcattggtttattctaattggtgtgaaggtt 33330715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 5343360 - 5343297
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| |||  |||||||||||||||||||||||    
T  5343360 ctcatagattatctctatcacttgctccacacatcattgacttattctcattggtgtgaaggtt 5343297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 1e-27; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3813910 - 3813818
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    ||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  3813910 atttgctctcattgattaccactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttctttgtagaaccggattcacaa 3813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5732548 - 5732460
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||   |||| ||||||||||||||||||||||||||||||||||||||    
T  5732548 atttgttctcattgattaccaccatcacttgctccacacatcattg---tattttcattggtgtgaaggtttctttggaaccggattcacaa 5732460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45348016 - 45348107
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||  |||||||||||||||    
T  45348016 atttgttctcatagattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggtttctttgtagaaccggattcacaa 45348107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45357495 - 45357586
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||  |||||||||||||||    
T  45357495 atttgttctcatagattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggtttctttgtagaaccggattcacaa 45357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9224605 - 9224696
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg--tttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||  ||| ||| |||||||||||||||    
T  9224605 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggttttttttttgaaccggattcacaa 9224696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18855613 - 18855544
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  18855613 atttgttctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtt 18855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9229392 - 9229482
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg-tttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||| ||| |||  ||||||||||||||    
T  9229392 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggttttttttttaaccggattcacaa 9229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 56146912 - 56146993
Alignment:
Q  3 ttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||      |||||||||||||||||||    
T  56146912 ttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaa------tttggaaccggattcacaa 56146993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 51520343 - 51520280
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtga 66  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  51520343 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga 51520280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 24741821 - 24741784
Alignment:
Q  9 tcattgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24741821 tcattgattaccactatctcttgctccacacatctttg 24741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 29760521 - 29760486
Alignment:
Q  11 attgattaccactatcgcttgctccacacatctttg 46  Q
    |||||||||||||||| |||||||||||||||||||    
T  29760521 attgattaccactatctcttgctccacacatctttg 29760486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18656318 - 18656230
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||   |||| ||||||||||||||||||||||||||||||||||||||    
T  18656318 atttgttctcattgattaccaccatcacttgctccacacatcattg---tattttcattggtgtgaaggtttctttggaaccggattcacaa 18656230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22173393 - 22173482
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||| ||| |||| ||||||||||||||    
T  22173393 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaagatttgtttgaaaccggattcacaa 22173482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2677286 - 2677358
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    ||||| |||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2677286 atttgctctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtttc 2677358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 32475364 - 32475301
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  32475364 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 32475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 2673136 - 2673202
Alignment:
Q  7 tctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    |||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2673136 tctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtttc 2673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 32480222 - 32480158
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttgg-tttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  32480222 ctcatagattacctctatctcttgctccacacatctttggatttattctcattggtgtgaaggtt 32480158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 10207813 - 10207750
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  10207813 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtt 10207750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8512102 - 8512032
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| |||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  8512102 atttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 8512032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8516982 - 8516912
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| |||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  8516982 atttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 8516912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 2671802 - 2671840
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  2671802 ctcatagattaccactatctcttgctccacacatctttg 2671840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 7167126 - 7167088
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  7167126 ctcatagattaccactatctcttgctccacacatctttg 7167088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 40373013 - 40373049
Alignment:
Q  10 cattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  40373013 cattgattaccactatctcttgctccacacacctttg 40373049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24024526 - 24024616
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg-tttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24024526 atttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtgaaggttttctttggaaccggattcacaa 24024616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31109781 - 31109870
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||| ||||||| |||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  31109781 atttgttctcattgattatcactatcacttgctgcacacatcattg-tttatt-tcattggtgtgaaggtttctttggaaccggattcacaa 31109870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21812437 - 21812508
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  21812437 atttgctctcatagattaccactatctcttgctccacacatctttggtttatt-tcattggtgtgaaggtttc 21812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19992199 - 19992130
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  19992199 atttgttctcattgattatcactatcacctgctccacacatctttggtttatt-tcattggtgtgaaggtt 19992130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12396798 - 12396712
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||   ||| |||||||||||||||    
T  12396798 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggt---ttttgaaccggattcacaa 12396712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12406218 - 12406149
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggttt 72  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||    
T  12406218 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggttt 12406149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 16879952 - 16879889
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16879952 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 16879889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 16884808 - 16884745
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16884808 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 16884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24261529 - 24261592
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24261529 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 24261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24266408 - 24266471
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24266408 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 24266471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4866616 - 4866530
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||   ||| |||||||||||||||    
T  4866616 atttgtcctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggt---ttttgaaccggattcacaa 4866530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 2057840 - 2057802
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  2057840 ctcatagattaccactatctcttgctccacacatctttg 2057802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 20357763 - 20357801
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  20357763 ctcatagattaccactatctcttgctccacacatctttg 20357801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 1533654 - 1533694
Alignment:
Q  6 ttctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  1533654 ttctcattgattaccactatattttgctccacacatctttg 1533694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9838 - 9928
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    ||||| |||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  9838 atttgctctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttgtttgaaaccggattcacaa 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 101 - 169
Alignment:
Q  23 tatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  101 tatcacttgctccacacatcattggtttatt-taattggtgtgaaggtttgtttgaaaccggattcacaa 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 249 - 157
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||||||||||||  ||||  |||||||||||||||    
T  249 atttgttctcattgattatcaccatcacttgctccacacatctttggtttatt-tcattggtgtgaaggttcgtttgtagaaccggattcacaa 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15044573 - 15044486
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||| |||| || |||   |||| ||||||||||||||||||||||||||||||||||||||    
T  15044573 atttgttctcattgattaccactatcacttgctctacacgtcattg---tatt-tcattggtgtgaaggtttctttggaaccggattcacaa 15044486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28807773 - 28807844
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttc 73  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  28807773 atttgttctcattgattatcactatcacttgctccacacatcattggtttatt-tcattggtgtgaaggtttc 28807844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37561644 - 37561715
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggttt 72  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  37561644 atttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtgaaggttt 37561715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37556822 - 37556889
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaag 68  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  37556822 atttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtgaag 37556889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 2785255 - 2785192
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  2785255 ctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtgaaggtt 2785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 43598608 - 43598527
Alignment:
Q  3 ttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||      ||||||||||||||||||||    
T  43598608 ttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga------ctttggaaccggattcacaa 43598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 43604100 - 43604019
Alignment:
Q  3 ttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||      ||||||||||||||||||||    
T  43604100 ttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga------ctttggaaccggattcacaa 43604019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 43609592 - 43609511
Alignment:
Q  3 ttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||      ||||||||||||||||||||    
T  43609592 ttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga------ctttggaaccggattcacaa 43609511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1457360 - 1457423
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtga 66  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  1457360 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga 1457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 43592165 - 43592082
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||| |||||      ||||||||||||||||||||    
T  43592165 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattgatgtga------ctttggaaccggattcacaa 43592082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 31397198 - 31397261
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  31397198 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 31397261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 31402055 - 31402118
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  31402055 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 31402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 33768059 - 33767996
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  33768059 ctcatagattatctctatcacttgctccacacatcattggtttattctcattgatgtgaaggtt 33767996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 33791196 - 33791133
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  33791196 ctcatagattatctctatcacttgctccacacatcattggtttattctcattgatgtgaaggtt 33791133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27444856 - 27444793
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtga 66  Q
    |||||| ||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  27444856 atttgtactcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtga 27444793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27449700 - 27449637
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtga 66  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| || ||||||| ||||||||||||    
T  27449700 atttgtactcattgattaccactatctcttgctccacatatcatt-gtttatt-tcattggtgtga 27449637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30631294 - 30631253
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatc 42  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  30631294 atttgttctcatagattaccactatctcttgctccacacatc 30631253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 13233 - 13143
Alignment:
Q  3 ttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtttctttg--gaaccggattcacaa 92  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||||  ||||  |||||||||||||||    
T  13233 ttgttctcattgattatcactatcacttgctccacatatctttggtttatt-tcattggtgtgaaggttcgtttgtagaaccggattcacaa 13143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35260 - 35350
Alignment:
Q  1 atttgttctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaagg-tttctttggaaccggattcacaa 92  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||| ||| |||  ||||||||||||||    
T  35260 atttgttctcattgattaccactatctcttgctccacacatcatt-gtttatt-tcattggtgtgaaggttttttttttaaccggattcacaa 35350  T

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Target: scaffold0197 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 14515 - 14578
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14515 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 14578  T

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Target: scaffold0197; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 19370 - 19433
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  19370 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 19433  T

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Target: scaffold0009 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 182170 - 182233
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  182170 ctcatagattacctctatctcttgctccacacatctttgatttattctcattggtgtgaaggtt 182233  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 149161 - 149224
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    ||||| ||||| | ||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  149161 ctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 149224  T

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Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 2471 - 2519
Alignment:
Q  23 tatcgcttgctccacacatctttggtttattctcattggtgtgaaggtt 71  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  2471 tatcacttgctccacacatcattgatttattctcattggtgtgaaggtt 2519  T

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Target: scaffold0978 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 453 - 491
Alignment:
Q  8 ctcattgattaccactatcgcttgctccacacatctttg 46  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  453 ctcatagattaccactatctcttgctccacacatctttg 491  T

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