View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1903_low_16 (Length: 309)
Name: NF1903_low_16
Description: NF1903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1903_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 13792838 - 13792557
Alignment:
| Q |
12 |
atgaatcacacgctaagaaagaagaagattctcgaactttcaaacgatataaacaaaagcgcggagaagtttgaagcagttaatattggaagacttgctt |
111 |
Q |
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| T |
13792838 |
atgaatcacacgctaagaaagaagaagattctcgaactttcaaacgatataaacaatagcgcggagaagtttgaagtagttaatattggaagacttgctt |
13792739 |
T |
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| Q |
112 |
ttaaaacaacaattaatatgttgtcgaatacggtttattcagttgatttggttcgttcgagtgatatagctggagagtttaaggaattagttacaaatat |
211 |
Q |
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| T |
13792738 |
ttaaaacaacgattaatatgttgtcgaatacggtttattcagttgatttggttcgttcgagcgatatagctggagagtttaaggaattagttacaaatat |
13792639 |
T |
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| Q |
212 |
tatgaaggaagttggaagagctaatattgcagattgttttcctgttttgaaagttatggatccaattggtattagaagaagg |
293 |
Q |
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| T |
13792638 |
tatgaaggaagttggaagagctaatattgcagattgttttcctgttttgaaagttttggatccaattggtattagaagaagg |
13792557 |
T |
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