View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1903_low_34 (Length: 209)
Name: NF1903_low_34
Description: NF1903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1903_low_34 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 6861818 - 6862026
Alignment:
| Q |
1 |
ctgattttaatgcagcatattctatagccatgaatttcttgaaggataaagagaaagaaaattgtggccaagaatgttattacctgaatccatatggtga |
100 |
Q |
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| T |
6861818 |
ctgattttaatgcagcatattctatagccatgaatttcttgaaggataaagagaaagaaaattgtggccaagaatgttattacctgaatccatatggtga |
6861917 |
T |
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| Q |
101 |
tttatcttgaaaaattggttaagcaaacctcgaacttcaaactatcaacagtagggtaatcttgtaagggcctaaaaggcctcaatgagcaaccaaaaga |
200 |
Q |
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| T |
6861918 |
tttatcttgaagaattggttaagcaaacctccaacttcaaactatcaacagtagggtaatcttgtaagggcctaaaaggcctcaatgagcaaccaaaaga |
6862017 |
T |
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| Q |
201 |
aaggtccct |
209 |
Q |
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| T |
6862018 |
aaggtccct |
6862026 |
T |
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