View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1903_low_36 (Length: 202)

Name: NF1903_low_36
Description: NF1903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1903_low_36
NF1903_low_36
[»] chr1 (18 HSPs)
chr1 (53-160)||(5277451-5277558)
chr1 (53-136)||(1102737-1102820)
chr1 (51-121)||(1695864-1695934)
chr1 (51-136)||(15615348-15615433)
chr1 (63-136)||(18088146-18088219)
chr1 (51-136)||(39834127-39834212)
chr1 (63-136)||(29386222-29386295)
chr1 (51-136)||(29987340-29987425)
chr1 (63-136)||(41810864-41810937)
chr1 (51-129)||(4964989-4965067)
chr1 (62-123)||(43142781-43142842)
chr1 (63-135)||(4974993-4975065)
chr1 (63-136)||(4764994-4765067)
chr1 (63-136)||(32712241-32712314)
chr1 (102-159)||(45721526-45721583)
chr1 (58-92)||(48074171-48074205)
chr1 (58-92)||(49112962-49112996)
chr1 (63-91)||(48074318-48074346)
[»] chr4 (26 HSPs)
chr4 (51-135)||(13870522-13870606)
chr4 (51-136)||(13846692-13846777)
chr4 (63-136)||(7632961-7633034)
chr4 (63-136)||(46429852-46429929)
chr4 (51-123)||(50523209-50523281)
chr4 (51-135)||(25154662-25154746)
chr4 (51-119)||(32751263-32751331)
chr4 (63-136)||(41898254-41898327)
chr4 (51-123)||(14336774-14336846)
chr4 (58-123)||(6111941-6112006)
chr4 (67-136)||(13864040-13864109)
chr4 (51-97)||(35778885-35778931)
chr4 (51-91)||(23159191-23159231)
chr4 (58-94)||(29031514-29031550)
chr4 (58-94)||(29043634-29043670)
chr4 (51-94)||(14966332-14966375)
chr4 (51-94)||(15631549-15631592)
chr4 (63-129)||(32557198-32557263)
chr4 (82-136)||(55358460-55358514)
chr4 (110-159)||(34979473-34979522)
chr4 (110-154)||(25154552-25154596)
chr4 (53-136)||(53856627-53856710)
chr4 (86-136)||(27389863-27389913)
chr4 (86-123)||(20421239-20421276)
chr4 (58-94)||(18598440-18598476)
chr4 (63-99)||(40998275-40998311)
[»] chr5 (21 HSPs)
chr5 (51-135)||(40807847-40807931)
chr5 (53-123)||(27496037-27496107)
chr5 (51-136)||(6641951-6642036)
chr5 (51-122)||(42092103-42092174)
chr5 (58-136)||(29440183-29440261)
chr5 (63-119)||(27318895-27318951)
chr5 (51-123)||(39805091-39805163)
chr5 (51-94)||(18008426-18008469)
chr5 (51-94)||(28574639-28574682)
chr5 (63-104)||(1737480-1737521)
chr5 (59-123)||(35171822-35171885)
chr5 (51-94)||(42375575-42375618)
chr5 (110-160)||(2797018-2797068)
chr5 (110-159)||(27496185-27496234)
chr5 (106-159)||(39805237-39805290)
chr5 (110-159)||(42091988-42092037)
chr5 (110-157)||(18008172-18008219)
chr5 (110-160)||(2803179-2803229)
chr5 (63-101)||(3124164-3124202)
chr5 (50-94)||(8943114-8943158)
chr5 (110-154)||(21250255-21250299)
[»] chr2 (26 HSPs)
chr2 (51-135)||(43671320-43671404)
chr2 (51-136)||(44436543-44436628)
chr2 (51-123)||(36387359-36387431)
chr2 (58-136)||(1039035-1039113)
chr2 (58-136)||(28582518-28582596)
chr2 (51-136)||(11974047-11974132)
chr2 (51-123)||(4603625-4603697)
chr2 (59-123)||(5483036-5483100)
chr2 (63-136)||(34334698-34334771)
chr2 (63-123)||(45638209-45638269)
chr2 (53-123)||(33615888-33615958)
chr2 (51-123)||(30851158-30851230)
chr2 (51-123)||(7438386-7438458)
chr2 (59-123)||(30513115-30513178)
chr2 (51-123)||(35125460-35125531)
chr2 (51-103)||(43865449-43865501)
chr2 (63-136)||(28182262-28182335)
chr2 (51-94)||(28238680-28238723)
chr2 (109-159)||(1039206-1039256)
chr2 (63-97)||(9144004-9144038)
chr2 (79-136)||(42553611-42553668)
chr2 (58-94)||(33953382-33953418)
chr2 (51-94)||(30823477-30823520)
chr2 (59-94)||(40343548-40343583)
chr2 (102-156)||(11974218-11974272)
chr2 (58-92)||(30823608-30823642)
[»] chr8 (30 HSPs)
chr8 (51-136)||(7093-7178)
chr8 (51-136)||(9117658-9117743)
chr8 (51-123)||(1043794-1043865)
chr8 (59-136)||(15891735-15891812)
chr8 (51-136)||(9779081-9779166)
chr8 (63-136)||(27702462-27702535)
chr8 (51-136)||(35435447-35435531)
chr8 (58-130)||(4157740-4157812)
chr8 (63-136)||(23403885-23403958)
chr8 (63-136)||(42691972-42692045)
chr8 (63-123)||(15315248-15315308)
chr8 (63-123)||(15495617-15495677)
chr8 (63-123)||(22780179-22780239)
chr8 (63-118)||(28463973-28464028)
chr8 (51-113)||(24043887-24043949)
chr8 (66-123)||(23275320-23275377)
chr8 (63-104)||(44318376-44318417)
chr8 (50-94)||(2257303-2257347)
chr8 (51-94)||(6121663-6121706)
chr8 (53-92)||(11482434-11482473)
chr8 (51-94)||(29276787-29276830)
chr8 (95-160)||(11482388-11482453)
chr8 (50-94)||(2250863-2250907)
chr8 (51-94)||(15300830-15300873)
chr8 (51-94)||(15481199-15481242)
chr8 (110-160)||(2251114-2251164)
chr8 (58-96)||(31618604-31618642)
chr8 (51-91)||(2251020-2251060)
chr8 (51-91)||(2257150-2257190)
chr8 (71-119)||(38507239-38507287)
[»] chr3 (25 HSPs)
chr3 (51-136)||(10820357-10820442)
chr3 (51-123)||(11218207-11218279)
chr3 (60-136)||(13658061-13658137)
chr3 (58-136)||(24098067-24098145)
chr3 (51-136)||(13712188-13712273)
chr3 (58-123)||(33623246-33623311)
chr3 (51-123)||(11871544-11871616)
chr3 (63-123)||(29230985-29231045)
chr3 (51-136)||(7515535-7515620)
chr3 (58-123)||(29777407-29777472)
chr3 (63-123)||(26997345-26997405)
chr3 (51-97)||(48518067-48518113)
chr3 (58-118)||(43122744-43122804)
chr3 (51-94)||(3750847-3750890)
chr3 (53-94)||(1771778-1771819)
chr3 (110-159)||(43122584-43122633)
chr3 (75-123)||(23232329-23232377)
chr3 (51-94)||(17579971-17580014)
chr3 (51-94)||(25147249-25147292)
chr3 (59-94)||(54923988-54924023)
chr3 (58-92)||(31324426-31324460)
chr3 (110-159)||(7515392-7515441)
chr3 (110-159)||(31324492-31324541)
chr3 (53-94)||(48382144-48382185)
chr3 (110-158)||(3750592-3750640)
[»] chr6 (6 HSPs)
chr6 (51-135)||(24012434-24012518)
chr6 (51-123)||(7858720-7858792)
chr6 (51-136)||(4799453-4799538)
chr6 (58-136)||(5985912-5985990)
chr6 (71-123)||(33040900-33040952)
chr6 (110-154)||(5985774-5985818)
[»] chr7 (24 HSPs)
chr7 (51-136)||(35127593-35127678)
chr7 (51-136)||(45443331-45443416)
chr7 (63-123)||(8919639-8919699)
chr7 (51-122)||(30648354-30648425)
chr7 (63-136)||(22642009-22642082)
chr7 (59-136)||(44941162-44941239)
chr7 (63-136)||(45203736-45203809)
chr7 (51-123)||(6723344-6723416)
chr7 (63-123)||(18942445-18942505)
chr7 (63-123)||(42759110-42759170)
chr7 (51-118)||(9907627-9907694)
chr7 (63-136)||(22563873-22563946)
chr7 (51-136)||(29036282-29036367)
chr7 (63-104)||(47332474-47332515)
chr7 (63-119)||(48840130-48840186)
chr7 (78-123)||(44449176-44449221)
chr7 (51-94)||(3173379-3173422)
chr7 (51-94)||(42430535-42430578)
chr7 (63-94)||(45909854-45909885)
chr7 (63-97)||(37043223-37043257)
chr7 (110-159)||(48840002-48840051)
chr7 (110-158)||(22564040-22564088)
chr7 (110-154)||(39304969-39305013)
chr7 (58-94)||(47193415-47193451)
[»] scaffold0182 (1 HSPs)
scaffold0182 (59-123)||(22332-22396)
[»] scaffold0051 (2 HSPs)
scaffold0051 (63-136)||(60610-60683)
scaffold0051 (110-160)||(60466-60516)
[»] scaffold0016 (1 HSPs)
scaffold0016 (63-136)||(202448-202521)
[»] scaffold0179 (1 HSPs)
scaffold0179 (63-136)||(32314-32387)
[»] scaffold0121 (1 HSPs)
scaffold0121 (67-136)||(23826-23895)
[»] scaffold0220 (1 HSPs)
scaffold0220 (63-94)||(21953-21984)


Alignment Details
Target: chr1 (Bit Score: 68; Significance: 1e-30; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 5277451 - 5277558
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatt 152  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||| ||| |||||||    
T  5277451 agattgatcttttctatcaaccttcgttaagccaaagttgatttgatagaaagaacctatctgaaacaaacgtgaaacctaaaggacagagggaggtatt 5277550  T
Q  153 tggcctat 160  Q
    || |||||    
T  5277551 tgacctat 5277558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 1102820 - 1102737
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||  ||||| |||||    
T  1102820 agataggtcatttctatcaacctccgttaagtcaaagttgatttgatagaaatgacttatctgaaataaactcgaaacttaaag 1102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 1695864 - 1695934
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaa 121  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  1695864 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaa 1695934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 15615348 - 15615433
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||    
T  15615348 tcagataggtcctttctaacaaccttcgttaagccaaagttgatttgatagaaatgacttatctgaaacaaactcgaaacttaaag 15615433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 18088219 - 18088146
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  18088219 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 18088146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 39834212 - 39834127
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||  ||||| |||||    
T  39834212 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggacctatctaaaacaaactcgaaacttaaag 39834127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 29386295 - 29386222
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||  ||||| |||||    
T  29386295 tttctatcaacctccgtgaagccaaagttgatttgatagaaagggcttatctgaaacaaactcgaaacttaaag 29386222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 29987425 - 29987340
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  29987425 tcagataggtcctttctatcgacctcctttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 29987340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 41810937 - 41810864
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  41810937 tttctatcaatctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaactcgaaacttaaag 41810864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 4965067 - 4964989
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaa 129  Q
    |||||| | |||||||||||||||||| |||| ||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  4965067 tcagatagatcatttctatcaacctccattaaaccaaagttgatctgatagaaaggacctatctgaaacaaacttgaaa 4964989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 43142781 - 43142842
Alignment:
Q  62 atttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  43142781 atttctattaacctccgttaaaccaaagttgatttgatagaaaagacctatccgaaacaaac 43142842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 4974993 - 4975065
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    ||||||||||||| | ||||| |||||||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  4974993 tttctatcaaccttcattaagtcaaagttgatttgatagaaatgacatatctgaaacaaacttgaaacttaaa 4975065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 4764994 - 4765067
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||| |||| ||||||||||||||||| ||| || |||||||||||||||  ||||| |||||    
T  4764994 tttctatcaacctccattaaaccaaagttgatttgataaaaaggatttatctgaaacaaactcgaaacttaaag 4765067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 32712314 - 32712241
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||  |||| |||||||||  ||||| |||||    
T  32712314 tttctatcaacctcccttaagctaaggttgatttaatagaaaagatatatccgaaacaaactcgaaacttaaag 32712241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 45721526 - 45721583
Alignment:
Q  102 aaaagacttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||| ||||||||||||||||||||| ||||| |  ||||||||||||| |||||    
T  45721526 aaaagacatatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttagccta 45721583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 48074171 - 48074205
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttg 92  Q
    |||||||||| ||||||||||||||||||||||||    
T  48074171 ggtcatttctgtcaacctccgttaagccaaagttg 48074205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 49112962 - 49112996
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttg 92  Q
    |||||||||| ||||||||||||||||||||||||    
T  49112962 ggtcatttctgtcaacctccgttaagccaaagttg 49112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 91
Target Start/End: Complemental strand, 48074346 - 48074318
Alignment:
Q  63 tttctatcaacctccgttaagccaaagtt 91  Q
    |||||||||||||||||||||||||||||    
T  48074346 tttctatcaacctccgttaagccaaagtt 48074318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 13870522 - 13870606
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  13870522 tcagataggtcatttctatcaacctctgttaagccaaagttgatttgatagaaatgacttatctgaaacaaacttgaaacttaaa 13870606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 13846692 - 13846777
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  13846692 tcagataggtcctttatatcaacctccgttaagccaaagttgatttgatagaaacgacctatctgaaacaaacttgaaacttaaag 13846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 7632961 - 7633034
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  7632961 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 7633034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 46429929 - 46429852
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagac----ttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||    
T  46429929 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacctatctatctgaaacaaacttgaaacctaaag 46429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 50523281 - 50523209
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  50523281 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaattacctatctgaaacaaac 50523209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 25154746 - 25154662
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    |||||| |||| |||||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||||||||  ||||||||||    
T  25154746 tcagataggtcctttctatcaacctccgttaagtgaaagttgatttgatagaaatgacctatctaaaacaaactcgaaacctaaa 25154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 32751263 - 32751331
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaac 119  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  32751263 tcagataggtcctttctatcaacctccgttaagccaaagttgattttatagaaatgatttatctgaaac 32751331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 41898327 - 41898254
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||  ||||| |||||    
T  41898327 tttctatcaaccttcgttaagccaaagtttatttgatataaaagacctatctgaaacaaactcgaaacttaaag 41898254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 14336846 - 14336774
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  14336846 tcagataggtcctttctatcaacttcagttaagccaaagttgatttgatagaaaggacctatctgaaagaaac 14336774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 6112006 - 6111941
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||| | ||| ||||||||    
T  6112006 ggtcctttctatcaaccttcgttaagccaaagttgatttgatagaaaggacctgtcttaaacaaac 6111941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 13864040 - 13864109
Alignment:
Q  67 tatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| ||||||||||||||||| ||||||||||||| ||  |||||||||||||| |||||| |||||    
T  13864040 tatcaatctccgttaagccaaagtagatttgatagaaatgatctatctgaaacaaacttgaaacttaaag 13864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 35778931 - 35778885
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttg 97  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||    
T  35778931 tcagataggtcctttctatcaacctccgttaagccaaagttgatttg 35778885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 23159191 - 23159231
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagtt 91  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23159191 tcagataggtcatttctatcaacctccgttaagccaaagtt 23159231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29031550 - 29031514
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  29031550 ggtcatttctatcaacctccgttaagccaaagttgat 29031514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29043670 - 29043634
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  29043670 ggtcatttctatcaacctccgttaagccaaagttgat 29043634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 14966375 - 14966332
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  14966375 tcagataggtcatttctatcaacctctgttaagccaaagttgat 14966332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 15631592 - 15631549
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||| ||||||||||||||||||||||||||||||||    
T  15631592 tcagataggtcttttctatcaacctccgttaagccaaagttgat 15631549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 32557263 - 32557198
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaa 129  Q
    |||||||||||||  ||||||| ||||||||||||||||||| ||| ||| |||||||||| |||||    
T  32557263 tttctatcaacctt-gttaagcgaaagttgatttgatagaaatgacctatatgaaacaaacttgaaa 32557198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 55358460 - 55358514
Alignment:
Q  82 agccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  55358460 agccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 55358514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 34979522 - 34979473
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| || |||| ||||||||||||||    
T  34979522 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 34979473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 25154596 - 25154552
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttg 154  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||    
T  25154596 tatctgaaacaaacgtgaaacttaaaggacccaggaaggtatttg 25154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 53856627 - 53856710
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||| |||| |||||||||| |||||||||| |||||||||||| |||||   ||| ||| |||||||||  |||||| |||||    
T  53856627 agataggtcctttctatcaatctccgttaagtcaaagttgatttaatagaggtgacctatttgaaacaaagttgaaacttaaag 53856710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 27389913 - 27389863
Alignment:
Q  86 aaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||  |||||||||||||||||  ||||| |||||    
T  27389913 aaagttgatttgatagaaataacttatctgaaacaaactcgaaacttaaag 27389863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 20421276 - 20421239
Alignment:
Q  86 aaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  20421276 aaagttgatttgatagaaatgacctatctgaaacaaac 20421239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 18598476 - 18598440
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  18598476 ggtcctttctatcaaccttcgttaagccaaagttgat 18598440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 40998275 - 40998311
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgat 99  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  40998275 tttctatcaacctctgttaagccaaagttgatctgat 40998311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 40807931 - 40807847
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  40807931 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaacttgaaacttaaa 40807847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 27496037 - 27496107
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  27496037 agataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaac 27496107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 6641951 - 6642036
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||  ||||| |||||    
T  6641951 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggaactatctgaaacaaactcgaaacttaaag 6642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 42092174 - 42092103
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaa 122  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  42092174 tcagataggtcctttctattaacctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaa 42092103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 29440261 - 29440183
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||  |||||| |||||    
T  29440261 ggtcatttctatcaacctccgttaagccaaagttgatttaatagaagggacctatctgaaacaaatttgaaacttaaag 29440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 27318951 - 27318895
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaac 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  27318951 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaac 27318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 39805091 - 39805163
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  39805091 tcagataggtcctttctatcaacttcagttaagccaaagttgatttgatagaaaggacctatctgaaagaaac 39805163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 18008469 - 18008426
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  18008469 tcagataggtcatttctatcaacctccgttaagccaaagttgat 18008426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 28574682 - 28574639
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  28574682 tcagataggtcatttctatcaacctccgttaagccaaagttgat 28574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 1737521 - 1737480
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaa 104  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  1737521 tttctatcaacctccgctaagccaaagttgatttgatagaaa 1737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 35171822 - 35171885
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    ||||||||| |||||||||||||||||||| |||||||||||  |||||| ||||| ||||||||    
T  35171822 gtcatttctttcaacctccgttaagccaaaattgatttgata-taaagacctatctaaaacaaac 35171885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 42375575 - 42375618
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  42375575 tcagataggtcatttctatcatcctccgttaagccaaagttgat 42375618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 2797018 - 2797068
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcctat 160  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||| ||||    
T  2797018 tatctgaaacaaacgtgaaacttaaaggacccaggaaggtatttggactat 2797068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 27496185 - 27496234
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| || |||| ||||||||||||||    
T  27496185 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 27496234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 39805237 - 39805290
Alignment:
Q  106 gacttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||||||| ||||| ||  ||| ||||||||||||||    
T  39805237 gacttatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggccta 39805290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 42092037 - 42091988
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| || |||| ||||||||||||||    
T  42092037 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 42091988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 18008219 - 18008172
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcc 157  Q
    ||||||||||||||||||||| ||||| |  |||||||||||||||||    
T  18008219 tatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttggcc 18008172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 2803179 - 2803229
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcctat 160  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||| ||||    
T  2803179 tatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttggactat 2803229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 3124202 - 3124164
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatag 101  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  3124202 tttctatcaacctccgtcaagccaaagttgttttgatag 3124164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 8943158 - 8943114
Alignment:
Q  50 atcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    ||||||| |||| |||||||||||||| | |||||||||||||||    
T  8943158 atcagataggtcttttctatcaacctctgctaagccaaagttgat 8943114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 21250299 - 21250255
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttg 154  Q
    |||||||||||||| |||||| ||||| ||||||| |||||||||    
T  21250299 tatctgaaacaaacctgaaacttaaaggacacagggaggtatttg 21250255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 43671404 - 43671320
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  43671404 tcagataggtcatttctatcaacctctgttaagccaaagttgatttgatagaaaggacctatctgaaacaaacttgaaacttaaa 43671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 44436543 - 44436628
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||||| |||||    
T  44436543 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaagacctatttgaaacaaactcgaaacttaaag 44436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 36387359 - 36387431
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  36387359 tcagataggtcttttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaac 36387431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 1039035 - 1039113
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  1039035 ggtcatttctatcaacctctgttaagtcaaagttgatttgatagaaatgacatatctgaaacaaacttgaaacataaag 1039113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 28582596 - 28582518
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  28582596 ggtcctttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 28582518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 11974047 - 11974132
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||  ||||| |||||    
T  11974047 tcagataggtcctttctatcaacctccgttaagccaaagttgatttcatagaaaggacctatctgaaacaaactcgaaacttaaag 11974132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 4603697 - 4603625
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  4603697 tcagataggtcttttctatcaacctccgttaagccaaagttgatttgatagaaatgacctaactgaaacaaac 4603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 5483036 - 5483100
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  5483036 gtcatttctatcaacctccgttaaaccaaagttgatttgatagaaatgacctatctgaaacaaac 5483100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 34334698 - 34334771
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||||| |||||    
T  34334698 tttctatcaacctccgttaagccaaaattgatttgatagaaaggacctatctgaaacaaatttgaaacttaaag 34334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 45638269 - 45638209
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  45638269 tttctatcaaactccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaac 45638209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 33615958 - 33615888
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  33615958 agataggtcatttctatcaacctccattaaaccaaagttgatttgatagaaatgacctatctcaaacaaac 33615888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 30851158 - 30851230
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||| | |||| ||| ||||||||||||||    
T  30851158 tcagataggtcctttctatcaacctccgttaagccaaacttgatttggttgaaaggacctatctgaaacaaac 30851230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 7438386 - 7438458
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| ||||||||||| || |||||||||||||| |||||||||||| ||  ||||||||||||||    
T  7438386 tcagataggtcctttctatcaacatctgttaagccaaagtttatttgatagaaaggatctatctgaaacaaac 7438458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 30513115 - 30513178
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||| |||||||||    
T  30513115 gtcatttctatcaaactccgttaagccaaagttgatttgagagaaatgacctatc-gaaacaaac 30513178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 35125531 - 35125460
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||| ||||    
T  35125531 tcagataggtcctttctatcaacctctgttaagc-aaagttgatttgatagaaatgacctatctgaaataaac 35125460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 43865449 - 43865501
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaa 103  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  43865449 tcagataggtcctttctatcaacctccgttaagtcaaagttgatttgatagaa 43865501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 28182335 - 28182262
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||  |||| ||||||||  ||||| |||||    
T  28182335 tttctatcaacatccgttaagtcaaagttgatttgatagaaatgaccaatctaaaacaaactcgaaacttaaag 28182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 28238723 - 28238680
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  28238723 tcagataggtcatttctatcaacctccgttaaggcaaagttgat 28238680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 1039206 - 1039256
Alignment:
Q  109 ttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||||||||    
T  1039206 ttatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggccta 1039256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 9144004 - 9144038
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttg 97  Q
    |||||||||||||||||||||||||||||||||||    
T  9144004 tttctatcaacctccgttaagccaaagttgatttg 9144038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 42553611 - 42553668
Alignment:
Q  79 ttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  42553611 ttaagccaaggttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 42553668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 33953418 - 33953382
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||| ||||||||||||||||||||||||||||||||    
T  33953418 ggtcctttctatcaacctccgttaagccaaagttgat 33953382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 30823477 - 30823520
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||| |||||||||| |||||||||||||||||||||    
T  30823477 tcagataggtcctttctatcaatctccgttaagccaaagttgat 30823520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 40343583 - 40343548
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||||||||||||||||||||| |||||||||||    
T  40343583 gtcatttctatcaacctccgttaatccaaagttgat 40343548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 11974218 - 11974272
Alignment:
Q  102 aaaagacttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggc 156  Q
    ||||||| ||||||||||||||||||||| ||||| || |||  |||||||||||    
T  11974218 aaaagacatatctgaaacaaacgtgaaacttaaaggacccagagaggtatttggc 11974272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 30823642 - 30823608
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttg 92  Q
    |||||||||| ||||||||||||||||||||||||    
T  30823642 ggtcatttctgtcaacctccgttaagccaaagttg 30823608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 7093 - 7178
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||  ||||| |||||    
T  7093 tcagataggtcatttctatcaacctccgttaagccaaagttgatttggtagaaaggacctatctgaaacaaactcgaaacttaaag 7178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 9117658 - 9117743
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||  |||||||||||    
T  9117658 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaggacctaactgaaacaaactcgaaacctaaag 9117743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 1043794 - 1043865
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  1043794 tcagataggtcttttctatcaacctctgttaagccaaagttgatttgatagaaaagacttatct-aaacaaac 1043865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 15891735 - 15891812
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  15891735 gtcatttttatcaacctccgttnagccaaagttgatttgatagaaatgacatatctgaaacaaactcgaaacttaaag 15891812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 9779081 - 9779166
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||  ||||| |||||    
T  9779081 tcagataggtcctttctatcaacctctgttaagccaaagttgatttgatagaaaggatctatctgaaacaaactcgaaacttaaag 9779166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 27702535 - 27702462
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||  ||||| |||||    
T  27702535 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacatatcttaaacaaactcgaaacttaaag 27702462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 35435531 - 35435447
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||    
T  35435531 tcagataggtcattt-tatcaacctctattaagccaaagttgatttgatagaaaggacttatctgaaacaaactcgaaacttaaag 35435447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 4157740 - 4157812
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaac 130  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||    
T  4157740 ggtcctttctatcaacttccgttaagccaaagttgatttgatagcaatgacctatctgaaacaaacttgaaac 4157812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 23403958 - 23403885
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  23403958 tttctattaacttccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaactcgaaacttaaag 23403885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 42692045 - 42691972
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||  ||||| |||||    
T  42692045 tttctatcaacctccgttaaaccaaagttgatttgatagaaatgacctatctaaaacaaactcgaaacttaaag 42691972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 15315308 - 15315248
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||    
T  15315308 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatccgaaataaac 15315248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 15495677 - 15495617
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||    
T  15495677 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatccgaaataaac 15495617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 22780179 - 22780239
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  22780179 tttctatcaacctcggttaagccaaagttgatttgatagaaatgacctatttgaaacaaac 22780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 28463973 - 28464028
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaa 118  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  28463973 tttctatcaacctccgttaagctaaagttgatttgatagaaatgacctatttgaaa 28464028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 24043887 - 24043949
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatc 113  Q
    |||||| ||||||||||||||||||| |||||| |||| ||||||||||||||| ||| ||||    
T  24043887 tcagataggtcatttctatcaacctctgttaagtcaaaattgatttgatagaaatgacctatc 24043949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 23275320 - 23275377
Alignment:
Q  66 ctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| ||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  23275320 ctattaaccttcgttaagccaaagttgatttaatagaaatgacctatctgaaacaaac 23275377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 44318417 - 44318376
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaa 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  44318417 tttctatcaacctccattaagccaaagttgatttgatagaaa 44318376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 2257347 - 2257303
Alignment:
Q  50 atcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||    
T  2257347 atcagataggtcctttctatcaacctccgttaagccaaagttgat 2257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 6121663 - 6121706
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  6121663 tcagataggtcatttctatcaacctccgtcaagccaaagttgat 6121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 11482434 - 11482473
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttg 92  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  11482434 agataggtcatttctatcaacctccgttaagccaaagttg 11482473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 29276830 - 29276787
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  29276830 tcagataggtcatttctatcaacttccgttaagccaaagttgat 29276787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 11482453 - 11482388
Alignment:
Q  95 ttgatagaaaagacttatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcctat 160  Q
    |||||||||| ||| ||||| ||||||||||||||| ||||| || |||| ||||||||| |||||    
T  11482453 ttgatagaaatgacctatctaaaacaaacgtgaaacttaaaggactcagggaggtatttgacctat 11482388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 2250863 - 2250907
Alignment:
Q  50 atcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||    
T  2250863 atcagataggtcctttctatcaacctacgttaagccaaagttgat 2250907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 15300873 - 15300830
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||    
T  15300873 tcagataggttatttctatcaacctccgttaagtcaaagttgat 15300830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 15481242 - 15481199
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||    
T  15481242 tcagataggttatttctatcaacctccgttaagtcaaagttgat 15481199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 2251114 - 2251164
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcctat 160  Q
    |||||||||||||||| |||| ||||| || |||| |||||||||||||||    
T  2251114 tatctgaaacaaacgtaaaacttaaaggactcagggaggtatttggcctat 2251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 31618642 - 31618604
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgattt 96  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  31618642 ggtcctttctatcaacctccgttaagccaaaattgattt 31618604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 2251060 - 2251020
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagtt 91  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  2251060 tcagataggtcatttctgtcaacctccgttaagtcaaagtt 2251020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 2257150 - 2257190
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagtt 91  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  2257150 tcagataggtcatttctgtcaacctccgttaagtcaaagtt 2257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 38507239 - 38507287
Alignment:
Q  71 aacctccgttaagccaaagttgatttgatagaaaagacttatctgaaac 119  Q
    |||||||||| || |||||||||||||||||||| ||| ||| ||||||    
T  38507239 aacctccgttgagtcaaagttgatttgatagaaaggacctatatgaaac 38507287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 10820442 - 10820357
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  10820442 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 10820357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 11218279 - 11218207
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  11218279 tcagataggtcatttctatcaacatccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaac 11218207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 13658061 - 13658137
Alignment:
Q  60 tcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  13658061 tcatttctatcaacctccgtttagccaaagttgatttgatagaaaggacctatctgaaacaaactcgaaacttaaag 13658137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 24098067 - 24098145
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||  ||||| |||||    
T  24098067 ggtcctttctatcaacctccgttaagccaaagttgatttgatagaaaaaacctacctgaaacaaactcgaaacttaaag 24098145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 13712188 - 13712273
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  13712188 tcagataggtcctttctatcgacctcctttaagccaaagttgatttgatagaaaggacctatctgaaacaaactcgaaacttaaag 13712273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 33623246 - 33623311
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  33623246 ggtcctttctatcaacctccgttaaaccaaagttgatttgatagaaaggacctatctgaaacaaac 33623311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 11871616 - 11871544
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||    
T  11871616 tcagataggtcctttctatcaacctccgttaagccaaagttgacttgatagaaatgacctatctaaaacaaac 11871544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 29231045 - 29230985
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  29231045 tttctatcaacctccgttaaaccaaagttgatttgatagaaatgacatatctgaaacaaac 29230985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 7515620 - 7515535
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||  ||||| |||||    
T  7515620 tcagataggtcctttatatcaaccttcgttaagccaaagttgatttgatagaaattacctatctgaaacaaactcgaaacttaaag 7515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 29777407 - 29777472
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  29777407 ggtcctttctatcaacctccgttacgccaaagttaatttgatagaaatgacctatctgaaacaaac 29777472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 26997405 - 26997345
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||    
T  26997405 tttctatcaacctccgttaagccaaagttgatttgatagaaatgaactatttgaaacaaac 26997345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 48518067 - 48518113
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttg 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  48518067 tcagataggtcatttctatcaacctccgttaagccaaagttgatttg 48518113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 43122804 - 43122744
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaa 118  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  43122804 ggtcctttctatcaacctccgttaaaccaaagttgatttgataaaaaggacctatctgaaa 43122744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 3750890 - 3750847
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  3750890 tcagataggtcatttctatcaacctccgttaagtcaaagttgat 3750847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 1771778 - 1771819
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  1771778 agataggtcatttctatcaacctctgttaagccaaagttgat 1771819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 43122633 - 43122584
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| || | |||||||||||||||||    
T  43122633 tatctgaaacaaacgtgaaacttaaaggaccctggaaggtatttggccta 43122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 23232377 - 23232329
Alignment:
Q  75 tccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||| | ||||||||||||||||||||||| |||| |||||||||    
T  23232377 tccgttaaactaaagttgatttgatagaaaagacatatccgaaacaaac 23232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 17580014 - 17579971
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||    
T  17580014 tcagataggtcatttttattaacctccgttaagccaaagttgat 17579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 25147249 - 25147292
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||| |||||||||||||| |||||||||||||||||    
T  25147249 tcagataggtcctttctatcaacctctgttaagccaaagttgat 25147292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 54924023 - 54923988
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||||||||||||||| |||||||||||||||||    
T  54924023 gtcatttctatcaacctctgttaagccaaagttgat 54923988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 31324460 - 31324426
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttg 92  Q
    |||||||||| ||||||||||||||||||||||||    
T  31324460 ggtcatttctgtcaacctccgttaagccaaagttg 31324426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 7515441 - 7515392
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| ||  ||| ||||||||||||||    
T  7515441 tatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggccta 7515392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 31324492 - 31324541
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| ||  ||| ||||||||||||||    
T  31324492 tatctgaaacaaacgtgaaacttaaaggaccaagggaggtatttggccta 31324541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 48382185 - 48382144
Alignment:
Q  53 agattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||| ||||||||||| ||||||||||||||||| |||||||    
T  48382185 agataggtcatttctaacaacctccgttaagccatagttgat 48382144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 3750640 - 3750592
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcct 158  Q
    ||||||||||||||||||||| ||||| || |||| |||||| ||||||    
T  3750640 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatctggcct 3750592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 24012518 - 24012434
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaa 135  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||| ||||    
T  24012518 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaataacctatctgaaacaaacttgaaacttaaa 24012434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 7858720 - 7858792
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  7858720 tcagataggtcatttctatcgacctccgttaagccaaagttgatttgatagaaagaacttatcagaaacaaac 7858792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 4799538 - 4799453
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||||||||||  || ||| ||||||||||  |||||||||||    
T  4799538 tcagataggtcctttctgtcaacctccgttaagccaaagttgatttgatagaaagcacctatttgaaacaaactcgaaacctaaag 4799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 5985990 - 5985912
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||  ||||| |||||    
T  5985990 ggtcttttctatcaacctccgttaagccaaagttgatttgatagaactgacctatctgaaaccaactcgaaacttaaag 5985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 33040900 - 33040952
Alignment:
Q  71 aacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||| ||||||||||| ||||||| ||  ||||||||||||||    
T  33040900 aacctccgttaagctaaagttgattttatagaaatgatctatctgaaacaaac 33040952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 5985818 - 5985774
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttg 154  Q
    ||||||||||||||||||||| ||||| || |||| |||||||||    
T  5985818 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttg 5985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 35127593 - 35127678
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  35127593 tcagataggtcctttctaacaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaactcgaaacttaaag 35127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 45443331 - 45443416
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||  ||||| |||||    
T  45443331 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctaaaacaaactcgaaacttaaag 45443416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 8919699 - 8919639
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  8919699 tttctatcaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaac 8919639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 30648425 - 30648354
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaa 122  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  30648425 tcagatagatcatttatatcaacctccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaa 30648354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 22642009 - 22642082
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  22642009 tttctatcaacctctgttaagccaaagttgatttgatagaaatgacatatctgaaacaaactcgaaacttaaag 22642082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 44941162 - 44941239
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||  ||||| |||||    
T  44941162 gtcatttctatcaacctccgttgagccaaagttgatttgatagaaatgatatatctgaaacaaactcgaaacttaaag 44941239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 45203736 - 45203809
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  45203736 tttctatcaaactccgttaagccaaagttgatttgatagaaatgacatatctgaaacaaactcgaaacttaaag 45203809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 6723416 - 6723344
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||    
T  6723416 tcagataggtcctttctatcaacctccgttaagccaaagttgatttgaaagaaaggacatatcttaaacaaac 6723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 18942505 - 18942445
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  18942505 tttctatcaacctccgttaagccataattgatttgatagaaatgacttatctgaaacaaac 18942445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 42759110 - 42759170
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  42759110 tttctatcaaccttcgttaagccaaagttgatttgatagaaaggacctatctgaaacaaac 42759170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 9907694 - 9907627
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaa 118  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  9907694 tcagataggtcatttctatcaacctccgttaagctagagttgatttgatagaaaggacctatctgaaa 9907627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 22563873 - 22563946
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||  ||||| |||||    
T  22563873 tttctatcaacctccattaagccaaagttgatttgatagaaaggacatatcggaaacaaactcgaaacttaaag 22563946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 29036282 - 29036367
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||||||||| |||  ||| |||||||||  ||||| |||||    
T  29036282 tcagataggtcctttctatcaacctccgttaagctaaagttgatttgatagaaatgaccaatccgaaacaaactcgaaacttaaag 29036367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 47332474 - 47332515
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47332474 tttctatcaacctccgttaagccaaagttgatttgatagaaa 47332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 48840186 - 48840130
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaac 119  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||    
T  48840186 tttctatcaatctccgttaagtcaaagttgatttgatagaaaggacctatctgaaac 48840130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 44449176 - 44449221
Alignment:
Q  78 gttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  44449176 gttaagccaaagttgatttgatagaaaagacctatctaaaacaaac 44449221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 3173379 - 3173422
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||||||||||||||||||||||||||| ||||||||    
T  3173379 tcagataggtcatttctatcaacctccgttaagccgaagttgat 3173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 42430578 - 42430535
Alignment:
Q  51 tcagattggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||    
T  42430578 tcagataggtcctttctatcaacctccattaagccaaagttgat 42430535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 94
Target Start/End: Complemental strand, 45909885 - 45909854
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgat 94  Q
    ||||||||||||||||||||||||||||||||    
T  45909885 tttctatcaacctccgttaagccaaagttgat 45909854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 37043257 - 37043223
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttg 97  Q
    ||||| |||||||||||||||||||||||||||||    
T  37043257 tttctgtcaacctccgttaagccaaagttgatttg 37043223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 48840051 - 48840002
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggccta 159  Q
    ||||||||||||||||||||| ||||| ||  ||| ||||||||||||||    
T  48840051 tatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggccta 48840002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 22564040 - 22564088
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcct 158  Q
    |||||||||||||||| |||| ||||| || |||| |||||||||||||    
T  22564040 tatctgaaacaaacgttaaacttaaaggactcagggaggtatttggcct 22564088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 39305013 - 39304969
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttg 154  Q
    ||||||||||||||||||||| ||||| || || |||||||||||    
T  39305013 tatctgaaacaaacgtgaaacttaaaggacccatgaaggtatttg 39304969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47193451 - 47193415
Alignment:
Q  58 ggtcatttctatcaacctccgttaagccaaagttgat 94  Q
    |||| |||| |||||||||||||||||||||||||||    
T  47193451 ggtcctttccatcaacctccgttaagccaaagttgat 47193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 22332 - 22396
Alignment:
Q  59 gtcatttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaac 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  22332 gtcatttctaccaacctccgttaagccaaagttgatttgatagaaatgacctatctgaaacaaac 22396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 60683 - 60610
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||| |||||| |||||    
T  60683 tttctatcaacctctgttaagccaaagttgatttgatagaaaggacctatctaaaacaaacttgaaacataaag 60610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 60516 - 60466
Alignment:
Q  110 tatctgaaacaaacgtgaaacctaaagcacacaggaaggtatttggcctat 160  Q
    ||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  60516 tatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcctat 60466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 202448 - 202521
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| |||||    
T  202448 tttctatcaacatccgttaagccaaagttgatttgatagaaaggacctatctgaaacaaactcgaaacttaaag 202521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 32387 - 32314
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||  ||||| |||||    
T  32387 tttctatcaacctctgttaagtcaaatttgatttgatagaaaggacttatctgaaacaaactcgaaacttaaag 32314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 23826 - 23895
Alignment:
Q  67 tatcaacctccgttaagccaaagttgatttgatagaaaagacttatctgaaacaaacgtgaaacctaaag 136  Q
    |||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||  ||||| |||||    
T  23826 tatcaacctccgttaagccagagttgatttgatagaaatgacctatctgaagcaaactcgaaacttaaag 23895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 94
Target Start/End: Complemental strand, 21984 - 21953
Alignment:
Q  63 tttctatcaacctccgttaagccaaagttgat 94  Q
    ||||||||||||||||||||||||||||||||    
T  21984 tttctatcaacctccgttaagccaaagttgat 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University