View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19041_low_2 (Length: 389)

Name: NF19041_low_2
Description: NF19041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19041_low_2
NF19041_low_2
[»] chr7 (40 HSPs)
chr7 (121-374)||(36631771-36632030)
chr7 (120-374)||(3113088-3113334)
chr7 (121-374)||(7003581-7003836)
chr7 (121-374)||(7049452-7049707)
chr7 (241-374)||(5556417-5556550)
chr7 (121-371)||(14775547-14775804)
chr7 (121-371)||(15226000-15226257)
chr7 (243-371)||(8395082-8395210)
chr7 (243-370)||(34468415-34468542)
chr7 (243-374)||(37001320-37001451)
chr7 (241-374)||(26625699-26625832)
chr7 (241-374)||(38637461-38637594)
chr7 (121-374)||(36659123-36659374)
chr7 (124-230)||(8395270-8395376)
chr7 (244-374)||(43183551-43183681)
chr7 (241-374)||(8866810-8866943)
chr7 (123-214)||(34468329-34468420)
chr7 (3-95)||(8070476-8070569)
chr7 (117-214)||(11019564-11019661)
chr7 (121-308)||(33686553-33686733)
chr7 (267-316)||(11019694-11019743)
chr7 (121-214)||(19400203-19400298)
chr7 (5-65)||(23913579-23913639)
chr7 (121-214)||(9230622-9230715)
chr7 (121-194)||(26493570-26493643)
chr7 (122-214)||(25024745-25024837)
chr7 (119-214)||(45197866-45197959)
chr7 (124-214)||(25491496-25491586)
chr7 (121-163)||(37001214-37001256)
chr7 (121-194)||(22937701-22937774)
chr7 (121-214)||(27387165-27387258)
chr7 (121-194)||(38826023-38826096)
chr7 (27-66)||(3359941-3359980)
chr7 (119-174)||(43183439-43183494)
chr7 (167-214)||(47729946-47729993)
chr7 (174-212)||(18375628-18375666)
chr7 (121-159)||(20965955-20965993)
chr7 (302-338)||(21420062-21420098)
chr7 (17-81)||(29372869-29372933)
chr7 (18-66)||(29455937-29455985)
[»] chr4 (75 HSPs)
chr4 (121-374)||(40530040-40530289)
chr4 (121-374)||(36381302-36381560)
chr4 (124-374)||(25931709-25931954)
chr4 (122-374)||(13390412-13390659)
chr4 (121-374)||(13013144-13013395)
chr4 (128-372)||(13398527-13398770)
chr4 (121-374)||(26438240-26438490)
chr4 (119-374)||(43356860-43357113)
chr4 (121-375)||(50204046-50204300)
chr4 (121-374)||(47501729-47501979)
chr4 (125-374)||(44157579-44157832)
chr4 (121-374)||(34406245-34406495)
chr4 (128-374)||(33135403-33135656)
chr4 (122-370)||(10351871-10352105)
chr4 (120-361)||(20130197-20130446)
chr4 (242-374)||(17510319-17510451)
chr4 (242-374)||(28876394-28876526)
chr4 (119-340)||(29319319-29319531)
chr4 (241-374)||(30076730-30076864)
chr4 (241-374)||(42332852-42332985)
chr4 (241-374)||(43142664-43142797)
chr4 (243-374)||(3291978-3292109)
chr4 (241-374)||(1818610-1818743)
chr4 (241-374)||(30215825-30215958)
chr4 (243-374)||(6689318-6689449)
chr4 (122-365)||(29994961-29995206)
chr4 (243-374)||(35546906-35547037)
chr4 (241-368)||(37577711-37577838)
chr4 (121-208)||(17510209-17510296)
chr4 (150-306)||(6236482-6236643)
chr4 (244-358)||(30110931-30111046)
chr4 (241-374)||(7769517-7769644)
chr4 (128-313)||(26449709-26449889)
chr4 (122-214)||(48131092-48131184)
chr4 (241-351)||(48130989-48131099)
chr4 (120-224)||(37577868-37577972)
chr4 (121-210)||(1818790-1818877)
chr4 (305-370)||(48130938-48131004)
chr4 (121-214)||(12211085-12211178)
chr4 (256-313)||(48990287-48990344)
chr4 (118-174)||(6689213-6689269)
chr4 (122-174)||(7769695-7769747)
chr4 (119-194)||(5516931-5517006)
chr4 (16-66)||(10184870-10184920)
chr4 (336-374)||(26449679-26449717)
chr4 (123-208)||(30076608-30076691)
chr4 (123-214)||(42843933-42844026)
chr4 (121-163)||(43142563-43142605)
chr4 (336-374)||(48990257-48990295)
chr4 (121-214)||(31002586-31002679)
chr4 (286-350)||(29132134-29132198)
chr4 (339-374)||(25931665-25931700)
chr4 (121-163)||(35547104-35547146)
chr4 (121-214)||(3074592-3074685)
chr4 (121-194)||(3239623-3239696)
chr4 (121-194)||(37236117-37236190)
chr4 (121-194)||(49908216-49908289)
chr4 (170-214)||(17359355-17359399)
chr4 (119-159)||(24974530-24974570)
chr4 (241-289)||(42843892-42843940)
chr4 (170-214)||(53692942-53692986)
chr4 (244-291)||(8897874-8897921)
chr4 (124-211)||(28876274-28876361)
chr4 (27-62)||(49495585-49495620)
chr4 (122-168)||(10058697-10058743)
chr4 (17-87)||(22318466-22318536)
chr4 (172-214)||(24104514-24104556)
chr4 (129-191)||(25182742-25182804)
chr4 (119-168)||(4552366-4552415)
chr4 (17-98)||(7001777-7001858)
chr4 (121-194)||(12679711-12679784)
chr4 (301-350)||(31854203-31854251)
chr4 (305-350)||(48130171-48130216)
chr4 (122-194)||(6211531-6211603)
chr4 (120-152)||(42332752-42332784)
[»] chr5 (43 HSPs)
chr5 (124-374)||(13818932-13819176)
chr5 (124-374)||(39656486-39656739)
chr5 (121-359)||(1775331-1775575)
chr5 (121-374)||(19986399-19986660)
chr5 (125-374)||(10036862-10037111)
chr5 (121-370)||(16155850-16156113)
chr5 (119-374)||(39435652-39435917)
chr5 (121-374)||(36292573-36292832)
chr5 (123-374)||(16332870-16333112)
chr5 (121-374)||(26282281-26282529)
chr5 (244-373)||(17331078-17331207)
chr5 (121-374)||(31500675-31500929)
chr5 (241-374)||(36292309-36292444)
chr5 (243-374)||(12277936-12278067)
chr5 (244-374)||(43069797-43069931)
chr5 (243-374)||(31681321-31681452)
chr5 (243-374)||(33431275-33431406)
chr5 (243-366)||(28801837-28801961)
chr5 (241-336)||(37255625-37255720)
chr5 (122-210)||(43069977-43070063)
chr5 (122-214)||(28801956-28802048)
chr5 (298-370)||(15959080-15959153)
chr5 (124-208)||(36292492-36292574)
chr5 (289-360)||(192764-192835)
chr5 (119-214)||(204073-204170)
chr5 (121-194)||(2985846-2985919)
chr5 (119-163)||(17330968-17331012)
chr5 (121-194)||(4306673-4306746)
chr5 (121-194)||(15497447-15497520)
chr5 (121-174)||(33431462-33431515)
chr5 (170-214)||(1280804-1280848)
chr5 (122-174)||(31681508-31681560)
chr5 (156-214)||(192852-192910)
chr5 (170-214)||(27168711-27168755)
chr5 (127-194)||(14317129-14317196)
chr5 (120-159)||(31649079-31649118)
chr5 (241-291)||(1280761-1280811)
chr5 (176-214)||(22712814-22712852)
chr5 (122-214)||(23244429-23244522)
chr5 (119-160)||(36704750-36704791)
chr5 (122-163)||(37255782-37255823)
chr5 (28-65)||(42013469-42013506)
chr5 (119-163)||(12277828-12277872)
[»] chr2 (49 HSPs)
chr2 (121-374)||(42442940-42443188)
chr2 (120-374)||(17443986-17444247)
chr2 (120-374)||(6402767-6403015)
chr2 (121-374)||(16406084-16406326)
chr2 (121-374)||(41250588-41250844)
chr2 (121-368)||(31580687-31580942)
chr2 (124-374)||(18982499-18982740)
chr2 (122-374)||(2286862-2287114)
chr2 (134-374)||(8058317-8058555)
chr2 (121-374)||(35963645-35963888)
chr2 (241-386)||(771677-771822)
chr2 (241-374)||(32126267-32126400)
chr2 (243-374)||(45419537-45419668)
chr2 (121-309)||(26161698-26161880)
chr2 (244-375)||(7071611-7071742)
chr2 (241-370)||(26238573-26238703)
chr2 (121-214)||(26238696-26238789)
chr2 (122-214)||(32126182-32126274)
chr2 (122-214)||(4554296-4554388)
chr2 (124-211)||(17090226-17090313)
chr2 (121-224)||(17035712-17035815)
chr2 (241-322)||(4554381-4554463)
chr2 (121-214)||(7071522-7071615)
chr2 (305-374)||(12755981-12756050)
chr2 (125-192)||(772269-772336)
chr2 (123-194)||(26655688-26655759)
chr2 (152-214)||(45122217-45122279)
chr2 (241-291)||(26656286-26656336)
chr2 (122-194)||(42755571-42755643)
chr2 (243-290)||(12755937-12755984)
chr2 (122-214)||(18425814-18425908)
chr2 (121-163)||(12755831-12755873)
chr2 (241-283)||(17035840-17035882)
chr2 (241-283)||(17090348-17090390)
chr2 (336-374)||(26161876-26161914)
chr2 (124-194)||(35649537-35649607)
chr2 (170-214)||(19951740-19951784)
chr2 (167-211)||(31393021-31393065)
chr2 (120-163)||(44084131-44084174)
chr2 (120-163)||(45419735-45419778)
chr2 (121-159)||(31162097-31162135)
chr2 (152-194)||(40653795-40653837)
chr2 (243-313)||(45122152-45122222)
chr2 (17-62)||(13829394-13829439)
chr2 (17-54)||(15219585-15219622)
chr2 (301-350)||(17372967-17373016)
chr2 (170-215)||(27925653-27925698)
chr2 (291-343)||(18829884-18829936)
chr2 (170-214)||(45261753-45261797)
[»] chr3 (45 HSPs)
chr3 (119-374)||(34083073-34083333)
chr3 (121-374)||(39772746-39772995)
chr3 (121-374)||(40080710-40080953)
chr3 (120-374)||(22967394-22967655)
chr3 (244-374)||(19391102-19391231)
chr3 (119-374)||(19564473-19564729)
chr3 (243-369)||(35514956-35515082)
chr3 (244-374)||(6268503-6268633)
chr3 (243-374)||(45183935-45184066)
chr3 (241-374)||(11017349-11017482)
chr3 (243-366)||(6929975-6930098)
chr3 (244-350)||(1185591-1185698)
chr3 (263-374)||(45336812-45336924)
chr3 (244-370)||(5136252-5136377)
chr3 (121-214)||(1185501-1185595)
chr3 (281-374)||(33041905-33041998)
chr3 (128-303)||(27936177-27936346)
chr3 (312-366)||(6502718-6502772)
chr3 (117-163)||(11017244-11017290)
chr3 (120-194)||(48757333-48757407)
chr3 (121-194)||(6891489-6891562)
chr3 (121-174)||(6929867-6929920)
chr3 (121-194)||(19269162-19269235)
chr3 (241-291)||(43137306-43137356)
chr3 (124-194)||(51817858-51817928)
chr3 (119-168)||(37516807-37516856)
chr3 (125-213)||(9743492-9743580)
chr3 (121-173)||(12910007-12910059)
chr3 (290-350)||(16094278-16094338)
chr3 (170-214)||(43137349-43137393)
chr3 (27-75)||(49107130-49107178)
chr3 (121-207)||(5136380-5136466)
chr3 (336-374)||(27936136-27936174)
chr3 (17-63)||(28625002-28625048)
chr3 (241-291)||(37381814-37381864)
chr3 (121-214)||(3856726-3856819)
chr3 (122-163)||(14461256-14461297)
chr3 (167-204)||(15668178-15668215)
chr3 (1-66)||(41538156-41538221)
chr3 (27-64)||(42035771-42035808)
chr3 (17-82)||(44000198-44000263)
chr3 (170-214)||(17073900-17073944)
chr3 (31-63)||(29011726-29011758)
chr3 (34-66)||(42547463-42547495)
chr3 (118-214)||(50091490-50091586)
[»] chr6 (22 HSPs)
chr6 (126-374)||(34947798-34948038)
chr6 (121-376)||(29744222-29744478)
chr6 (121-374)||(399573-399819)
chr6 (241-374)||(33228430-33228564)
chr6 (244-374)||(13838754-13838884)
chr6 (243-374)||(28997684-28997815)
chr6 (241-370)||(31028033-31028163)
chr6 (273-386)||(34253075-34253186)
chr6 (121-210)||(33228298-33228385)
chr6 (123-214)||(25599378-25599469)
chr6 (140-195)||(24074656-24074711)
chr6 (122-205)||(34253232-34253314)
chr6 (5-66)||(29203042-29203103)
chr6 (121-214)||(32441833-32441926)
chr6 (152-208)||(11971188-11971244)
chr6 (122-214)||(30621388-30621480)
chr6 (172-214)||(12180430-12180472)
chr6 (121-163)||(28997881-28997923)
chr6 (17-66)||(27824778-27824827)
chr6 (121-194)||(34385004-34385077)
chr6 (290-350)||(10232282-10232342)
chr6 (122-174)||(13838925-13838977)
[»] chr1 (39 HSPs)
chr1 (120-374)||(7434375-7434622)
chr1 (121-374)||(17446248-17446505)
chr1 (123-374)||(23313949-23314206)
chr1 (125-374)||(32981008-32981270)
chr1 (122-374)||(42309899-42310153)
chr1 (241-370)||(15209367-15209497)
chr1 (241-374)||(11957437-11957570)
chr1 (244-370)||(41971337-41971464)
chr1 (268-368)||(33490340-33490441)
chr1 (121-225)||(320668-320772)
chr1 (123-313)||(3829968-3830151)
chr1 (241-336)||(35908549-35908644)
chr1 (123-214)||(41971250-41971341)
chr1 (120-183)||(26159361-26159424)
chr1 (121-214)||(15209283-15209374)
chr1 (124-214)||(33490460-33490550)
chr1 (121-207)||(11957304-11957390)
chr1 (119-214)||(26272786-26272881)
chr1 (336-374)||(3829938-3829976)
chr1 (121-186)||(48900639-48900704)
chr1 (165-214)||(52753718-52753767)
chr1 (121-214)||(35948836-35948931)
chr1 (168-214)||(30558911-30558957)
chr1 (125-194)||(17875557-17875626)
chr1 (170-214)||(25017609-25017653)
chr1 (17-93)||(30798855-30798931)
chr1 (170-214)||(32379765-32379809)
chr1 (121-168)||(25007644-25007691)
chr1 (1-56)||(32467969-32468024)
chr1 (122-168)||(33468860-33468906)
chr1 (121-163)||(35908706-35908748)
chr1 (156-214)||(170346-170406)
chr1 (121-214)||(30055044-30055137)
chr1 (121-194)||(31867477-31867549)
chr1 (21-66)||(39739005-39739050)
chr1 (17-98)||(45658750-45658831)
chr1 (124-168)||(37153881-37153925)
chr1 (121-161)||(44305599-44305639)
chr1 (170-214)||(48606520-48606564)
[»] chr8 (39 HSPs)
chr8 (121-374)||(28524154-28524401)
chr8 (126-366)||(29727350-29727588)
chr8 (119-374)||(39915470-39915719)
chr8 (121-374)||(3647743-3648003)
chr8 (121-374)||(24019355-24019602)
chr8 (121-374)||(7278981-7279240)
chr8 (157-371)||(15839231-15839454)
chr8 (241-374)||(36409439-36409572)
chr8 (241-370)||(40469946-40470076)
chr8 (241-374)||(34135884-34136017)
chr8 (120-300)||(27046841-27047020)
chr8 (243-376)||(4404961-4405094)
chr8 (121-374)||(23403023-23403275)
chr8 (241-374)||(16787104-16787237)
chr8 (244-366)||(3436196-3436319)
chr8 (119-303)||(29632413-29632593)
chr8 (298-374)||(9878175-9878251)
chr8 (121-313)||(42231922-42232108)
chr8 (127-214)||(40469866-40469953)
chr8 (120-210)||(36409616-36409704)
chr8 (122-212)||(3436318-3436408)
chr8 (121-210)||(24592196-24592285)
chr8 (165-214)||(42447147-42447196)
chr8 (121-214)||(21958735-21958830)
chr8 (121-163)||(16787000-16787042)
chr8 (121-214)||(13152253-13152346)
chr8 (121-194)||(17839572-17839645)
chr8 (271-313)||(2727959-2728001)
chr8 (121-163)||(34135783-34135825)
chr8 (336-374)||(42231892-42231930)
chr8 (121-194)||(5637567-5637640)
chr8 (169-214)||(28846828-28846873)
chr8 (16-60)||(54129-54173)
chr8 (170-214)||(24333940-24333984)
chr8 (336-366)||(2727993-2728023)
chr8 (121-159)||(16594824-16594862)
chr8 (241-291)||(21958692-21958742)
chr8 (122-168)||(36406378-36406424)
chr8 (170-214)||(10467974-10468018)
[»] scaffold0069 (1 HSPs)
scaffold0069 (121-374)||(18515-18773)
[»] scaffold0002 (2 HSPs)
scaffold0002 (120-374)||(479417-479668)
scaffold0002 (170-213)||(435257-435300)
[»] scaffold0154 (2 HSPs)
scaffold0154 (241-374)||(32170-32303)
scaffold0154 (121-214)||(32296-32388)
[»] scaffold0178 (2 HSPs)
scaffold0178 (122-186)||(21945-22009)
scaffold0178 (122-186)||(27447-27511)
[»] scaffold0015 (2 HSPs)
scaffold0015 (121-214)||(214018-214113)
scaffold0015 (241-291)||(214106-214156)
[»] scaffold0062 (1 HSPs)
scaffold0062 (17-75)||(3723-3781)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-80)||(7546-7620)
[»] scaffold0019 (1 HSPs)
scaffold0019 (121-194)||(134712-134784)
[»] scaffold0495 (1 HSPs)
scaffold0495 (290-350)||(9004-9064)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 36632030 - 36631771
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  36632030 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaattttttta 36631931  T
Q  221 ttttttatttnnnnnnnnnn------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    ||||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36631930 ttttttattttttttcctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 36631831  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36631830 cgtaatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 36631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 3113088 - 3113334
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    |||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||     |||    
T  3113088 gcagtggcggagccagaaaatttatggagttcgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaatcgaa-----ttt 3113182  T
Q  220 attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataa 319  Q
     ||||||  |           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||    
T  3113183 tttttttcct---aaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgtaa 3113279  T
Q  320 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  3113280 tatacgtgaagtctgaaaattgaccctgtaatcaaataacatgtattttgaccat 3113334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 7003836 - 7003581
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| |||||||||||||||||||||||||||||  | ||  |||||||||||||| || |||||| |||| |||||||||||  | |||||     
T  7003836 cagtggcggagtcaggaaatttatggagcccgggcaaaaaaaaattctcaaattcacatgtgatataatatatcaacattcataaatcgatttttttttt 7003737  T
Q  221 tttttta--tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
      |||||  |||          |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||    
T  7003736 aattttaattttaattaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgta 7003637  T
Q  319 atatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7003636 atatacgtgaagtctgaaaattgaccctataattaaataacatatattctgaccat 7003581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 7049707 - 7049452
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| |||||||||||||||||||||||||||||  | ||  |||||||||||||| || |||||| |||| |||||||||||  | |||||     
T  7049707 cagtggcggagtcaggaaatttatggagcccgggcaaaaaaaaattctcaaattcacatgtgatataatatatcaacattcataaatcgatttttttttt 7049608  T
Q  221 tttttta--tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
      |||||  |||          |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||    
T  7049607 aattttaattttaattaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgta 7049508  T
Q  319 atatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7049507 atatacgtgaagtctgaaaattgaccctataattaaataacatatattctgaccat 7049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 5556550 - 5556417
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5556550 tcgaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 5556451  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||    
T  5556450 gaccctgtaattaaataacatgtattctgaccat 5556417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 121 - 371
Target Start/End: Original strand, 14775547 - 14775804
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt- 219  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||  | |||||     
T  14775547 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatatgacataatatataaatagtcataaatcgatttttttttt 14775646  T
Q  220 -attttt--tatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
     ||||||  |||||             || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |    
T  14775647 aatttttattattttacctaaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatc 14775746  T
Q  314 atataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgac 371  Q
    |  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  14775747 acgtaatatacgtgaagtctgaaaattgatcctgtaattaaataacatgcattctgac 14775804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 121 - 371
Target Start/End: Original strand, 15226000 - 15226257
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt- 219  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||  | |||||     
T  15226000 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatatgacataatatataaatagtcataaatcgatttttttttt 15226099  T
Q  220 -attttt--tatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
     ||||||  |||||             || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |    
T  15226100 aatttttattattttacctaaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatc 15226199  T
Q  314 atataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgac 371  Q
    |  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  15226200 acgtaatatacgtgaagtctgaaaattgatcctgtaattaaataacatgcattctgac 15226257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 8395210 - 8395082
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||    
T  8395210 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggtttattaattgaaattgaccacgcaatatacgtgaagtctgaaaattga 8395111  T
Q  343 ccctgtaattaaataacatgtattctgac 371  Q
    || ||||||||||||||||||||||||||    
T  8395110 ccatgtaattaaataacatgtattctgac 8395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 243 - 370
Target Start/End: Original strand, 34468415 - 34468542
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  34468415 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaattga 34468514  T
Q  343 ccctgtaattaaataacatgtattctga 370  Q
    || |||||||||||||||||||||||||    
T  34468515 ccttgtaattaaataacatgtattctga 34468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 37001320 - 37001451
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||| |||||||||| |||||||||||||||||     
T  37001320 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgacaatataatatatgtgaagtctgaaaattgg 37001419  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| |||||||    
T  37001420 ccctgtaattaaataacatgtattttgaccat 37001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 26625832 - 26625699
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  26625832 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 26625733  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||| |||||||    
T  26625732 ggccctgtaattaaataacatgtattttgaccat 26625699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 38637461 - 38637594
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| | ||||||||||| ||||||| ||||||||||||||||    
T  38637461 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaaataaaattgaccatgtaatatatgtgaagtctgaaaatt 38637560  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||| |||||||    
T  38637561 ggccctgtaattaaataacatgtattttgaccat 38637594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 36659374 - 36659123
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatta-atcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||| ||| || ||||||||||||||  |||| ||||||||||||||||| |||||| ||| |||||||||||||| ||||||    
T  36659374 cagtggcggagccaggaaattgatgtagtccgggcaaaaaattttatcgaaaattcacatgtgacataatatatcaacggtcataaatcgaaacattttt 36659275  T
Q  220 att--tttta---tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
     ||  |||||   ||           || |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||        ||||||    
T  36659274 tttaattttaattttaattaaaaatatcaaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattatta--------tgacca 36659183  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    | ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  36659182 tgtaatatacgtgaagtctcacaattggccctgtaattaaataacatgtattctgaccat 36659123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 8395376 - 8395270
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattt 223  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8395376 tggcggagccagaaaatttatggaggccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaatttttttattt 8395277  T
Q  224 tttattt 230  Q
    |||||||    
T  8395276 tttattt 8395270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 43183551 - 43183681
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||| |    
T  43183551 aaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattggc 43183650  T
Q  344 cctgtaattaaataacatgtattctgaccat 374  Q
    | ||||||||||||||||||||| |||||||    
T  43183651 catgtaattaaataacatgtattttgaccat 43183681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 8866810 - 8866943
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  8866810 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattgaccacgtaatatatgtgaagtctgaaaatt 8866909  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | | |||||||||||||||||||||| |||||||    
T  8866910 ggctctgtaattaaataacatgtattttgaccat 8866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 34468329 - 34468420
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||    
T  34468329 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcctaaattcacatgtgatataatatataaacagtcataaattgaaata 34468420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 8070476 - 8070569
Alignment:
Q  3 gtattttgttcataaaaaa-tcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgtcttgtaatgttat 95  Q
    ||||||||| ||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8070476 gtattttgtccataaaaaaattgtttaagataaaaatttgttcaatatcataaaagtttgtcatgcattattctatcttgtcttgtaatgttat 8070569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 11019564 - 11019661
Alignment:
Q  117 ttagcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| | | |||  ||||||||||||||||| ||||||||||||||||||||| |||||    
T  11019564 ttagcggtggcggagccagaaaatttatggagcccgggcaaaacaattatcacaaattcacatgtgacataatatataaacagtcataaatcaaaata 11019661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 308
Target Start/End: Complemental strand, 33686733 - 33686553
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||| |||||| || ||||||||||||  ||| ||||||||| |||| |||||||||| ||| || | ||||||||| ||||||||| ||||||||||     
T  33686733 cagtgacggagctagaaaatttatggagttcggacaaaaaatttatcgcaaattcacatatgagataacatataaacaatcataaatccaaatatttttt 33686634  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaat 308  Q
    ||| | |              |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  33686633 tttctaa-------aaaaaaccgaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaat 33686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 11019694 - 11019743
Alignment:
Q  267 gtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccata 316  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11019694 gtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccata 11019743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 19400298 - 19400203
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| || ||||| ||||| ||||||||| || |||| ||||||| |||||||||   ||||||||| ||||||||||| |||||    
T  19400298 cagtggcggagccagaaattttatagagcctgggcaaaaagtttatcgcaaattcatatgtgacataatatatataaatagtcataaatcaaaata 19400203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 23913579 - 23913639
Alignment:
Q  5 attttgttcataaaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcat 65  Q
    ||||||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  23913579 attttgtccataaaaaattatttaagaccaaaaattgtttaatgtcataaaagtttgtcat 23913639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 9230715 - 9230622
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| || || |||||  |||| ||||||||  || || | ||||||||||||||||| ||||||||| ||||||||||| |||||    
T  9230715 cagtggcggagctagaaattttatcaagcctgggcaaaattttgattgcaaattcacatgtgacataatatataaatagtcataaatcaaaata 9230622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 26493570 - 26493643
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||| ||| |||||||| |||   |||| ||||||| |||||||||||||||||||||| |||||||    
T  26493570 cagtggcggagtcagtaaatttatagagtttgggcgaaaaatttatcgtaaattcacatgtgacataatatata 26493643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 25024837 - 25024745
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||| ||||| ||| | | ||||||  |||| || |||||||||| |||||| ||||||||| | ||||||||| |||||    
T  25024837 agtggcggagccaggaattttatagagtctgagcaaaattttaaccgcaaattcacatatgacataatatataaataatcataaatcaaaata 25024745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 45197959 - 45197866
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||| || | ||| |||   |||||||||||| |||| |||||||||||||||||   |||||||  ||||||||||||||||    
T  45197959 agcagtggcggagccagaaattctatagagtgtgggcaaaaaatttatcgcaaattcacatgtgacat--aatataaatggtcataaatcgaaata 45197866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 25491496 - 25491586
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||  | ||||| ||| | ||||||||  |||| || ||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  25491496 tggcggagccagatattttatagagtctgggcaaaattttaaccgcaaatttacatgtgacataatatataaatagtcataaattgaaata 25491586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 37001214 - 37001256
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  37001214 cagtggcggagctaggaaatttatggagcccgggcgaaaaatt 37001256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 22937701 - 22937774
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| | || ||||||| |||| ||||||||||||||||| |||||||    
T  22937701 cagtggcggagccaggaattacatagagcctgagcgaaaaatttatcgcaaattcacatgtgacataatatata 22937774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 27387165 - 27387258
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| || || || ||||| |||||||||||| |||| || ||  ||||||||||   ||||||||| |||||||||||||||||    
T  27387165 cagtggcggagccagaaatttcatagagcctgggcaaaaaatttatcgcaactt--catgtgacataatatatataaatagtcataaatcgaaata 27387258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 38826023 - 38826096
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||| | |||| ||||||| |||| ||||||||||||||||| |||||||    
T  38826023 cagtggcggagccaggaattacatagagtctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 38826096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 3359941 - 3359980
Alignment:
Q  27 taagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  3359941 taagacaaaaaattattcaatatcataaaagtttatcatg 3359980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 43183439 - 43183494
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    ||||||||||||||||| ||||||||| |||| |||| ||||||| ||| ||||||    
T  43183439 agcagtggcggagccagaaaatttatgaagcctgggcgaaaaatttatcctaaatt 43183494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 47729993 - 47729946
Alignment:
Q  167 cgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||| ||||||||| ||||||||| | |||||||||||||||    
T  47729993 cgtaaattcaaatgtgacataatatataaataatcataaatcgaaata 47729946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 18375666 - 18375628
Alignment:
Q  174 tcacatgtgacatgatatataaacagtcataaatcgaaa 212  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  18375666 tcacatgtgacataatatataaatagtcataaatcgaaa 18375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 20965993 - 20965955
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaa 159  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  20965993 cagtggcggagccaggaaatttatagagcctgggcaaaa 20965955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 21420062 - 21420098
Alignment:
Q  302 ttgaaattgaccatataatatacgtgaagtctgaaaa 338  Q
    |||||||||||| | ||||||||||||||||||||||    
T  21420062 ttgaaattgaccttgtaatatacgtgaagtctgaaaa 21420098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 29372869 - 29372933
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttg 81  Q
    ||||||||| |||||| ||||||| || |||| |||||||||||||| || ||| ||||| ||||    
T  29372869 aaaaatcatataagaccaaaaattatttaataccataaaagtttgtcttgtattgttctgacttg 29372933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 29455937 - 29455985
Alignment:
Q  18 aaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    |||||||| |||||| ||| ||| ||||||| |||||||||||||||||    
T  29455937 aaaatcatataagaccaaatattattcaataccataaaagtttgtcatg 29455985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 6e-93; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 40530289 - 40530040
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  40530289 cagtggcggagccaggaaatttatggagccctagcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaatgtttttt 40530190  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||  |            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  40530189 tttttcct----aaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaat 40530094  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40530093 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattatgaccat 40530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 36381302 - 36381560
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||| || | |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36381302 cagtggcggagccaggaaatttatggagaccagacaaaaaattaattgtaaattcacatgtgacataatatataaacagtcataaatcgaaatattttta 36381401  T
Q  221 ttttttatttnnnnnnnnnn------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    ||||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36381402 ttttttatttttttttctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattaaaattgacca 36381501  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  36381502 cgtaatatacgtgaagtctgaaaattga-cttgtaattaaataacatgtattctgaccat 36381560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 124 - 374
Target Start/End: Complemental strand, 25931954 - 25931709
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattt 223  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||    
T  25931954 tggcagagccaaaaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaatgttttt--tt 25931857  T
Q  224 tttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatata 323  Q
    |||  |           || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25931856 tttcct---aaaaaaaatcaaaataaaagaggtttatcattttgttaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatata 25931760  T
Q  324 cgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25931759 catgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 25931709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 122 - 374
Target Start/End: Original strand, 13390412 - 13390659
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttat 221  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||      
T  13390412 agtggcggagccaggaaatttatgaagctctggcaaaaaattaatcgtaaattcacatgtgacataatatatcaacagtcataaatcaaaatatattt-- 13390509  T
Q  222 tttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataata 321  Q
    |||||| ||          |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  13390510 tttttaattaaaaaaa---tcgaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaata 13390606  T
Q  322 tacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  13390607 tacgtgaagtttgaaaattggccctgtaattaaataacatgtattctgaccat 13390659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 13013395 - 13013144
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||  | |||||     
T  13013395 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcgatttttttttt 13013296  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  13013295 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 13013198  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13013197 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 13013144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 128 - 372
Target Start/End: Original strand, 13398527 - 13398770
Alignment:
Q  128 ggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatt--ttt 225  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  |||    
T  13398527 ggagccaggaaatttatgaagttcgggcaaaaaatttatcgtaaattcacatgtgacataatatatcaacagtcataaatcgaaatattttttttaattt 13398626  T
Q  226 tatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacg 325  Q
    || ||          |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||    
T  13398627 taattaaaaaaa---tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattatcaattgaaattgaccatgtaatatacg 13398723  T
Q  326 tgaagtctgaaaattgaccctgtaattaaataacatgtattctgacc 372  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  13398724 tgaagtctgaaaattggctctgtaattaaataacatgtattcggacc 13398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 26438240 - 26438490
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||     
T  26438240 cagtggcggagccaggaaatttatggagcctgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgattttttttt- 26438338  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    | |||||  |          || ||||||| || |||||||||||| ||||||||||  |||||||||||||||||||||||| ||||| ||||  ||||    
T  26438339 tattttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaat 26438436  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26438437 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 26438490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 119 - 374
Target Start/End: Complemental strand, 43357113 - 43356860
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||    
T  43357113 agcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgatttttttt 43357014  T
Q  219 tattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
    | | |||||  |          || ||||||| || |||||||||||| ||||||||||  |||||||||||||||||||||||| ||||| ||||  ||    
T  43357013 tttattttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgta 43356916  T
Q  319 atatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43356915 atatacgtgaagtctgaaaattgaccctgtaattaaataatatgtattctgaccat 43356860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 121 - 375
Target Start/End: Original strand, 50204046 - 50204300
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||||||||||||||||||||| | || |||||||| |||| ||||| ||||||||||| |||||| |||||||||||||||||| ||| ||     
T  50204046 cagtggcggagccaggaaatttatggagctcaggaaaaaaatttatcgcaaatttacatgtgacataatatatcaacagtcataaatcgaaacattattt 50204145  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||  | ||           || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  50204146 tttaattttaattaaaaaaatcaaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaat 50204245  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccata 375  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  50204246 atacgtgaagtctgaaaattggccctgtaattaaataacaggttttctgaccata 50204300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 47501979 - 47501729
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||  | |||||     
T  47501979 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaatcgattttttttt- 47501881  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  47501880 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 47501783  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47501782 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 47501729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 125 - 374
Target Start/End: Complemental strand, 44157832 - 44157579
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatt-- 222  Q
    ||||||| |||||||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||| |||| |||||| ||      
T  44157832 ggcggagtcaggaaatttatggagcc-gggcaaaaaatttatcgcaaattcacatgtgacataatatatcaacagttataaattgaaacattttttttaa 44157734  T
Q  223 -ttttatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataa 319  Q
     ||| ||||            |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||    
T  44157733 ttttaattttaattaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgatcatgtaa 44157634  T
Q  320 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44157633 tatgcgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 44157579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 34406245 - 34406495
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||     
T  34406245 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgattttttttt- 34406343  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    | |||||  |          || ||||||| || |||||||||||| ||||||||||  |||||||||||||||||||||||| ||||| ||||  ||||    
T  34406344 tattttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaat 34406441  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34406442 atacgtgaagtctgaaaattgaccctgtaattaaataatatgtattctgaccat 34406495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 128 - 374
Target Start/End: Original strand, 33135403 - 33135656
Alignment:
Q  128 ggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatttttta 227  Q
    |||||||| ||||||||||||| ||| ||||||||| |||  ||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||| |    
T  33135403 ggagccagaaaatttatggagctcggacaaaaaatttatcacaaattcacatgtgacataatatatcaacagtcataaatcaaaatatttttttttttaa 33135502  T
Q  228 tttnnnnnnnnnntc-------gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||          |        |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  33135503 ttttaattttaattaaaaaattgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaat 33135602  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||| |||||||||||||||||  | ||||||||||||||||||||| |||||||    
T  33135603 atatgtgaagtctgaaaattggtcatgtaattaaataacatgtattttgaccat 33135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 122 - 370
Target Start/End: Original strand, 10351871 - 10352105
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttat 221  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||| |  |||||||||||||||||||||    |||||||      
T  10351871 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcgcaacttcacatgtgata--atatataaacagtcataaatc----tattttt-- 10351962  T
Q  222 tttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataata 321  Q
     |||||             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  10351963 -tttta------aaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaata 10352055  T
Q  322 tacgtgaagtctgaaaattgaccctgt-aattaaataacatgtattctga 370  Q
    ||| ||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  10352056 tacatgaagtctgaaaattgaccttgtaaattaaatcgcatgtattctga 10352105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 120 - 361
Target Start/End: Complemental strand, 20130446 - 20130197
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||    
T  20130446 gcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgattttttttt 20130347  T
Q  220 --attttttatt------tnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattga 311  Q
      ||||||||||                 || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| |    
T  20130346 taattttttattattttacctaaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaa 20130247  T
Q  312 ccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacat 361  Q
    | |  ||||||||||||||||||||||||||||||||| |||||| ||||    
T  20130246 ctacgtaatatacgtgaagtctgaaaattgaccctgtagttaaatgacat 20130197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 17510319 - 17510451
Alignment:
Q  242 cgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattg 341  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  17510319 cgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattg 17510418  T
Q  342 accctgtaattaaataacatgtattctgaccat 374  Q
    ||| ||||||||||||| |||||||||||||||    
T  17510419 accttgtaattaaataatatgtattctgaccat 17510451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 28876394 - 28876526
Alignment:
Q  242 cgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattg 341  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  28876394 cgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattg 28876493  T
Q  342 accctgtaattaaataacatgtattctgaccat 374  Q
    ||| |||||||||||||||| |||| |||||||    
T  28876494 accttgtaattaaataacatatattatgaccat 28876526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 119 - 340
Target Start/End: Original strand, 29319319 - 29319531
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||  ||| ||||    
T  29319319 agcagttgcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaatc--aatttttt 29319416  T
Q  219 tattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
    | ||  | |             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||    
T  29319417 ttttcctaa-------aaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgta 29319509  T
Q  319 atatacgtgaagtctgaaaatt 340  Q
    |||||| |||||||||||||||    
T  29319510 atatacctgaagtctgaaaatt 29319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 30076730 - 30076864
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30076730 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 30076829  T
Q  341 gaccctgt-aattaaataacatgtattctgaccat 374  Q
    |||| ||| |||||||| |||||||||||||||||    
T  30076830 gaccttgtaaattaaatcacatgtattctgaccat 30076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 42332852 - 42332985
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  42332852 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 42332951  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||| |||||||    
T  42332952 ggccctgtaattaaataacatgtattttgaccat 42332985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 43142664 - 43142797
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  43142664 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 43142763  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||| |||||||    
T  43142764 ggccctgtaattaaataacatgtattttgaccat 43142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 3291978 - 3292109
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  3291978 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 3292077  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| |||||||    
T  3292078 ccctgtaattaaataacatgtattttgaccat 3292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 1818743 - 1818610
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1818743 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata-ggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 1818645  T
Q  341 gaccctgta-attaaataacatgtattctgaccat 374  Q
     ||| |||| || |||| |||||||||||||||||    
T  1818644 aaccttgtatataaaatcacatgtattctgaccat 1818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 30215825 - 30215958
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  30215825 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 30215924  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | || ||||||||||||||||||||| |||||||    
T  30215925 ggccttgtaattaaataacatgtattttgaccat 30215958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 6689318 - 6689449
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| || ||||||||||||||     
T  6689318 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtaaagtctgaaaattgg 6689417  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| |||||||    
T  6689418 ccctgtaattaaataacatgtattttgaccat 6689449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 365
Target Start/End: Original strand, 29994961 - 29995206
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttat 221  Q
    |||||||||| |||||||||||||||||||||  |||||||| |||||||||| | ||||||||| ||||||||||||||||||||| |  | ||||| |    
T  29994961 agtggcggagtcaggaaatttatggagcccggataaaaaattgatcgtaaatttatatgtgacataatatataaacagtcataaatcaattttttttttt 29995060  T
Q  222 t--tttta-----tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    |  |||||     |||          | ||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||    
T  29995061 taattttaatttttttctcaaaaaaattgaaataaaagaggtttatcattttgtcaacaaaa------tttaaaataggattattaattgaaattgacca 29995154  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgt-aattaaataacatgtat 365  Q
    | ||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  29995155 tgtaatatacgtgaagtctgaaaattgaccccgtaaattaaatcacatgtat 29995206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 35547037 - 35546906
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  35547037 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 35546938  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||||||||||||||| |||||||    
T  35546937 ccatgtaattaaataacatgtattttgaccat 35546906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 37577838 - 37577711
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  37577838 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaattaggattattaattgaaattgatcatgtaatatacatgaagtctgaaaatt 37577739  T
Q  341 gaccctgtaattaaataacatgtattct 368  Q
     ||| |||||||||||||||||||||||    
T  37577738 aaccttgtaattaaataacatgtattct 37577711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 17510209 - 17510296
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatc 208  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17510209 cagtggcggagccaggaaatttatggagcacgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatc 17510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 6236643 - 6236482
Alignment:
Q  150 ccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatttttta-----tttnnnnnnnnnntcga 244  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||||     |||          ||||    
T  6236643 ccgggcacaaaattaatcgtaaattcatatgtgacataatatataaacagtcataaatcgaaatattttttatttttattttttttcctaaaaaaatcga 6236544  T
Q  245 aataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaa 306  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||    
T  6236543 aataaaagaggtttatcattttatcaacaaaaatacaatttaaaatacggttattaattgaa 6236482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 30111046 - 30110931
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattga 342  Q
    |||||||| |||||  | ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  30111046 aaataaaataggttctttattttgtcaacaaaagtacaatttaaaatatggttattgattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 30110947  T
Q  343 ccctgtaattaaataa 358  Q
    ||||||||||||||||    
T  30110946 ccctgtaattaaataa 30110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 7769644 - 7769517
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||| ||||||||||| ||||||| ||||      ||||||    
T  7769644 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaatagaattattaattaaaattgaccatgtaatatatgtga------aaaatt 7769551  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | || ||||||||||||||||||||| |||||||    
T  7769550 ggccatgtaattaaataacatgtattttgaccat 7769517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 313
Target Start/End: Complemental strand, 26449889 - 26449709
Alignment:
Q  128 ggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatttttta 227  Q
    ||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||| || ||||||||||| | ||||||  |||||||| | |||  |     
T  26449889 ggagctaggaaatttatggagctcgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaattataaattcaaatatttctttttcct- 26449791  T
Q  228 tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
                 ||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  26449790 ----caaaaaaaatcgaaataaaataggtttatcattttgtcaacaaaagtacaatgtaaaataggattattaattgaaattgacc 26449709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 48131184 - 48131092
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||||||||||||| | |||||||||| | |||| ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  48131184 agtggcggagccaggaaatttatggagtctgggcaaaaaaattatcgcaaattaacatgtgacataatatataaacattcataaatcgaaata 48131092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 48131099 - 48130989
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaat 339  Q
    ||||||||||| |||||  || |||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  48131099 tcgaaataaaaaaggttcctccttttgtcaacaaaagtacattttaaa-tagggttattaattgaaattgaccatgtaatatacgttaagtctgaaaaat 48131001  T
Q  340 tgaccctgtaat 351  Q
    ||||| ||||||    
T  48131000 tgaccatgtaat 48130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 37577972 - 37577868
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    |||||| ||| |||| |||||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||| ||||||||  |||||||||     
T  37577972 gcagtgacggggccatgaaatttatggagttcgggcaaaaaatttatcgcaaattcacatatgacataatatataaacaatcataaattaaaatatttta 37577873  T
Q  220 atttt 224  Q
    |||||    
T  37577872 atttt 37577868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 1818877 - 1818790
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga 210  Q
    |||||||||||||||||||||||| |||| ||||| ||||||| |||  |||||||||||||| |  |||||||||||||||||||||||    
T  1818877 cagtggcggagccaggaaatttatagagcacgggcgaaaaatttatcacaaattcacatgtgaaa--atatataaacagtcataaatcga 1818790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 48131004 - 48130938
Alignment:
Q  305 aaattgaccatataatatacgtgaagtctgaaaa-ttgaccctgtaattaaataacatgtattctga 370  Q
    ||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  48131004 aaattgaccatgtaatatacgcgaagtctgaaaaattgaccatgtaattaaataacatgtattctga 48130938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 12211085 - 12211178
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||| ||| ||||  |||   |||||||||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||    
T  12211085 cagtggcggagccatgaattttacagagtttgggcaaaaaatttatcgcaaattcacatgtgacataatatataaataatcataaatcgaaata 12211178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 48990344 - 48990287
Alignment:
Q  256 tttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  48990344 tttatcattttgtcaataaaagtacaatttaaaatagagttattaattgaaattgacc 48990287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 6689213 - 6689269
Alignment:
Q  118 tagcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  6689213 tagcagtggcggagccaggaaatttatggagcccgggcgaaaaatttatcctaaatt 6689269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 7769747 - 7769695
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  7769747 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcctaaatt 7769695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 5516931 - 5517006
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  5516931 agcagtggcggagccaggaactacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 5517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 10184870 - 10184920
Alignment:
Q  16 aaaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  10184870 aaaatatcatataagacaaaaaattgttcaataccataaaagtttgtcatg 10184920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 26449717 - 26449679
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26449717 aaattgaccctgtaattaaataacatgtattctgaccat 26449679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 30076608 - 30076691
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatc 208  Q
    |||||||||||| |||||||||||||| |||   ||||||| |||| || |||||||||||||  ||||||||||||| |||||||    
T  30076608 gtggcggagccaagaaatttatggagctcggatgaaaaatttatcgcaacttcacatgtgaca--atatataaacagttataaatc 30076691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 42844026 - 42843933
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgac--atgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||||| | ||| ||||| |||| ||||||| ||||  ||||||||||||||  |  ||||||||| |||||||||||||||||    
T  42844026 gtggcggagccaggaattctatagagcctgggcgaaaaatttatcgccaattcacatgtgacgtaatatatataaatagtcataaatcgaaata 42843933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 43142563 - 43142605
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  43142563 cagtggcggagccaggaaatttatggagcccgggcgaaaaatt 43142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 48990295 - 48990257
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48990295 aaattgaccctgtaattaaataacatgtattctgaccat 48990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 31002586 - 31002679
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||  || ||| | ||||| ||||||||  || | || ||||||||||||||||| ||||||||| ||||||||||| |||||    
T  31002586 cagtggcggagccataaattttgtagagcctgggcaaaattttgaccgcaaattcacatgtgacataatatataaatagtcataaatcaaaata 31002679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 29132134 - 29132198
Alignment:
Q  286 aaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    |||||||||||| | ||||||||||| ||| ||||||||| |||||||||||| |||| ||||||    
T  29132134 aaaatagggttaattattgaaattgatcatgtaatatacgcgaagtctgaaaaatgacactgtaa 29132198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 374
Target Start/End: Complemental strand, 25931700 - 25931665
Alignment:
Q  339 ttgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||    
T  25931700 ttgaccctgtaattaaataacatgtattctgaccat 25931665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 35547146 - 35547104
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  35547146 cagtggcggagccaggaaatttatggagtccgggcgaaaaatt 35547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 3074685 - 3074592
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| ||||| ||||| ||| | ||| ||||  || |  ||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  3074685 cagtggcggagctaggaattttatcgagtctgggtaaaattttgactgtaaattcacatacgacataatatataaatagtcataaatcgaaata 3074592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 3239623 - 3239696
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||  ||| ||||| ||||| |  ||||||||| || ||||||||||||||||||| |||||||    
T  3239623 cagtggcggagcctagaattttatagagcctgcacaaaaaatttattgtaaattcacatgtgacataatatata 3239696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 37236117 - 37236190
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||| || |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  37236117 cagtggcggagccagaaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 37236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 49908216 - 49908289
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||| ||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  49908216 cagtggcggaaccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 49908289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17359399 - 17359355
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||    
T  17359399 aaattcacatgtgacataatatataaataatcataaatcgaaata 17359355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 24974530 - 24974570
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaa 159  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  24974530 agcagtggcggagccaggaaatttatagagcctgggcaaaa 24974570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 42843940 - 42843892
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaa 289  Q
    |||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  42843940 tcgaaataaaagaggttcgtcattttttcaacaaaagtacaatttaaaa 42843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 53692942 - 53692986
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  53692942 aaattcacatgcgacataatatataaatagtcataaatcgaaata 53692986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 8897874 - 8897921
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    ||||||||||||||  ||||||||||||||||||| |||||| |||||    
T  8897874 aaataaaagaggttcgtcattttgtcaacaaaagtacaatttgaaata 8897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 28876274 - 28876361
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaa 211  Q
    ||||||||| |||||||||||| |   ||||||||||||| || | ||| | ||||||||||| || ||| ||| |||||||||||||    
T  28876274 tggcggagcgaggaaatttatgaaattcgggcaaaaaatttattgcaaaattacatgtgacataatgtatcaacggtcataaatcgaa 28876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 49495620 - 49495585
Alignment:
Q  27 taagacaaaaaattgttcaatatcataaaagtttgt 62  Q
    ||||| ||||||||||||||||||||||||||||||    
T  49495620 taagataaaaaattgttcaatatcataaaagtttgt 49495585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 10058743 - 10058697
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  10058743 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcg 10058697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 22318466 - 22318536
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgtcttgt 87  Q
    ||||||||| ||| |||| ||||| ||||||||||||||| |||||||||  || || |||||||| ||||    
T  22318466 aaaaatcatataaaacaagaaattattcaatatcataaaaatttgtcatgtgttgttatgtcttgtgttgt 22318536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 24104514 - 24104556
Alignment:
Q  172 attcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| ||||||||||||||||| | |||||||    
T  24104514 attcacatgtgacataatatataaacagtcatagaacgaaata 24104556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 25182742 - 25182804
Alignment:
Q  129 gagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatat 191  Q
    |||||||||| ||||| |||||  ||||||||| | |||| ||||||||||||||||| ||||    
T  25182742 gagccaggaattttatagagcctaggcaaaaaaattatcgcaaattcacatgtgacataatat 25182804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 4552415 - 4552366
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    |||||||||||||||||||| ||||| ||| | |||||||||||| ||||    
T  4552415 agcagtggcggagccaggaattttatagagtctgggcaaaaaatttatcg 4552366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 7001858 - 7001777
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgtcttgtaatgttatgtc 98  Q
    ||||||| | |||||| ||||||| ||||||  ||||||| |||||| || ||| ||||||||||| |||| ||||| ||||    
T  7001858 aaaaatcgtataagaccaaaaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtgttgtgatgttctgtc 7001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 12679711 - 12679784
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||  |||  ||||||| |||| ||||||||||||||||| |||||||    
T  12679711 cagtggcggagccaggaattacatagagcttgggtgaaaaatttatcgcaaattcacatgtgacataatatata 12679784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 31854251 - 31854203
Alignment:
Q  301 attgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    ||||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  31854251 attgaaattgacc-tgtaatatatgtgaagtctgaaaaatgaccctgtaa 31854203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 350
Target Start/End: Original strand, 48130171 - 48130216
Alignment:
Q  305 aaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    |||||||||||||||||||| | | ||||||||| |||||||||||    
T  48130171 aaattgaccatataatatacattatgtctgaaaaatgaccctgtaa 48130216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 6211531 - 6211603
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||| |||||| |  || ||||| | || ||||||| |||| ||||||||||||||||| |||||||    
T  6211531 agtggcggagtcaggaattacatagagcctgagcgaaaaatttatcgcaaattcacatgtgacataatatata 6211603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 42332752 - 42332784
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccg 152  Q
    ||||||||||||||||||||||||| |||||||    
T  42332752 gcagtggcggagccaggaaatttatagagcccg 42332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 1e-84; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 124 - 374
Target Start/End: Complemental strand, 13819176 - 13818932
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattt 223  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  13819176 tggcggagtcaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaatattttttttt 13819077  T
Q  224 tttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatata 323  Q
     | |             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||    
T  13819076 ctaa------aaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgactacgtaatata 13818983  T
Q  324 cgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  13818982 cgtgaagtctaaaaattgaccatgtaattaaataacatgtattctaaccat 13818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 124 - 374
Target Start/End: Original strand, 39656486 - 39656739
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattt 223  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||    
T  39656486 tggcggagccagaaaatttatggagctcgggcaaaaaattaatcttaaattcacatgtgatataatatataaacagtcataaatcgaaatattttttttt 39656585  T
Q  224 tttatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
     || |||             |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  ||||    
T  39656586 attttttttcctaaaagaaatcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaat 39656685  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39656686 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctaaccat 39656739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 121 - 359
Target Start/End: Original strand, 1775331 - 1775575
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  1775331 cagtgtcggagccaggaaatttatggagcccggacaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaattttttta 1775430  T
Q  221 ttttttatttnnnnnnnnnn------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    ||||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1775431 ttttttattttttttcctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatatggttattgattgaaattgacca 1775530  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataac 359  Q
      |||||||||||||||||||||||||| ||||||||||||||||    
T  1775531 cgtaatatacgtgaagtctgaaaattgaacctgtaattaaataac 1775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 19986660 - 19986399
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt-- 218  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||      
T  19986660 cagtggcggagccaggaaatttatggagtccgggcaaaaaattaatcttaaattcacacttgacataatatataaacagtcataaatcgaaatattttat 19986561  T
Q  219 ---tattttt---tatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 312  Q
       |||||||   | |||          ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  19986560 ttttatttttatttttttctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaacgtacaatttaaaataggattattaattgaaattgac 19986461  T
Q  313 catataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19986460 cacgtaatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 19986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 125 - 374
Target Start/End: Complemental strand, 10037111 - 10036862
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatttt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||| | | |||||| |    
T  10037111 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcataaattcacatgtgatataatatataaacagtcataaattgaatt-tatttattat 10037013  T
Q  225 ttatttnnnnnnnnnn-tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatata 323  Q
    || |||           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |    
T  10037012 ttttttcctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaataca 10036913  T
Q  324 cgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10036912 tgtgaagtctgaaaattcaccctgtaattaaataacatgtattctgaccat 10036862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 121 - 370
Target Start/End: Complemental strand, 16156113 - 16155850
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggc---aaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattt 217  Q
    ||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  16156113 cagtggcggagccaggaaatttatggagcccggacggtaaaaaattaatcgtaaattcacatgtgacataatatataaacaatcacaaatcgaaatattt 16156014  T
Q  218 ----ttattttt-----tatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaa 306  Q
        ||||||||     |||||            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16156013 atttttatttttattattattttcctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaa 16155914  T
Q  307 attgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctga 370  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16155913 attgaccacataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctga 16155850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 119 - 374
Target Start/End: Complemental strand, 39435917 - 39435652
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga--aatatt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |  | ||||    
T  39435917 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgaaataatatataaacagtcataaatcaattattatt 39435818  T
Q  217 tttattttt--tatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattga 311  Q
    |||||||||  |||||             || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  39435817 tttatttttattattttacctaaaaaaaatcaaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattga 39435718  T
Q  312 ccatataatatacgtgaagtctgaaaattgaccctgtaattaaat---aacatgtattctgaccat 374  Q
    |||  ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||    
T  39435717 ccacgtaatatacgtgaagtctgaaaattgtccctgtaattaaataacaacatgtattctgaccat 39435652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 36292573 - 36292832
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt- 219  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||     
T  36292573 cagtggcggagccaggaaatttatggagccggggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgatttttttttt 36292672  T
Q  220 -attttt--tatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
     ||||||  |||||            || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  36292673 aatttttattattttacctaaaaaaatcaaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaacca 36292772  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36292773 cgtaatatacttgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 36292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 123 - 374
Target Start/End: Original strand, 16332870 - 16333112
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||    |||||  |    
T  16332870 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtaatataatatataaacagtcataaatcga----ttttttct 16332965  T
Q  223 ttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatat 322  Q
    |  ||             |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  ||||||    
T  16332966 tccta-----aaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaattacaatttaaaatagggttattaattgaaattgaccacgtaatat 16333060  T
Q  323 acgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16333061 acgtgaagtctgaaaattgaccctgtaattaaataacatgtattatgaccat 16333112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 26282281 - 26282529
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||     
T  26282281 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgat---tttttt 26282377  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  26282378 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 26282475  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26282476 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 26282529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 17331078 - 17331207
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  17331078 aaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgac 17331177  T
Q  344 cctgtaattaaataacatgtattctgacca 373  Q
     |||||||||||||||||||||| ||||||    
T  17331178 tctgtaattaaataacatgtattttgacca 17331207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 31500675 - 31500929
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||| |||||||||||||||||||||| |||  ||||||||| |||| |||||||||||||||||  ||||| ||||||||||||||| ||  ||||||    
T  31500675 cagtgccggagccaggaaatttatggagtccgaacaaaaaatttatcgcaaattcacatgtgacatagtatatcaacagtcataaatcgtaac-ttttta 31500773  T
Q  221 tttttt---atttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccat 315  Q
    ||| ||   ||||            |||| |||||| |||||||||||||||||||   |||| |||||||||||||| | |||||||||| ||||||||    
T  31500774 tttattttaattttaattaaaaaaatcgatataaaataggtttatcattttgtcaa---aagtacaatttaaaataggataattaattgaagttgaccat 31500870  T
Q  316 ataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
     ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  31500871 gtaatatacgtgaagtctgaaaattggccctgtaattaaataacatgtactctgaccat 31500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 36292444 - 36292309
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc-atataatatacgtgaagtctgaaaat 339  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||    
T  36292444 tcgaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataaggttattaattgaaattgaccaatgtaatatacgtgaagtttgaaaat 36292345  T
Q  340 tgaccctgt-aattaaataacatgtattctgaccat 374  Q
    ||||||||| |||||||| |||||||||||||||||    
T  36292344 tgaccctgtaaattaaatcacatgtattctgaccat 36292309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 12277936 - 12278067
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  12277936 gaaataaaagaggattatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 12278035  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||||||||||||||| |||||||    
T  12278036 ccttgtaattaaataacatgtattttgaccat 12278067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 43069931 - 43069797
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaa---gtctgaaaatt 340  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||    
T  43069931 aaataaaagaggtttatcatttagtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtcgtctgaaaatt 43069832  T
Q  341 gaccctgt-aattaaataacatgtattctgaccat 374  Q
    |||| ||| |||||||| |||| ||||||||||||    
T  43069831 gaccttgtaaattaaatcacatatattctgaccat 43069797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 31681452 - 31681321
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  31681452 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 31681353  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||||||||||||||| |||||||    
T  31681352 ccttgtaattaaataacatgtattttgaccat 31681321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 33431406 - 33431275
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  33431406 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 33431307  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||||||||||||||| |||||||    
T  33431306 ccttgtaattaaataacatgtattttgaccat 33431275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 243 - 366
Target Start/End: Complemental strand, 28801961 - 28801837
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattg 341  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  |||||||||||||||||| |||||||    
T  28801961 gaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggtttttaattgaaattgatcacgtaatatacgtgaagtctgaaaaattg 28801862  T
Q  342 accctgtaattaaataacatgtatt 366  Q
    ||| |||||||||||||||||||||    
T  28801861 accttgtaattaaataacatgtatt 28801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 37255720 - 37255625
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaa 336  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  37255720 tcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgaccatgtaatatacgtgaagtctgaa 37255625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 43070063 - 43069977
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga 210  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||  |||||||||||||||||||||||    
T  43070063 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcgtaaattcacacgtgaca--atatataaacagtcataaatcga 43069977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 28802048 - 28801956
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||    
T  28802048 agtggtggagccaagaaatttatggagtccgggcaaaaaattaatcgcaaattcacatgcgacataatatataaacagtcataaattgaaata 28801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 15959080 - 15959153
Alignment:
Q  298 ttaattgaaattgaccatataatatacgtgaagtctg-aaaattgaccctgtaattaaataacatgtattctga 370  Q
    |||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||    
T  15959080 ttaattgaaattgaccatgtaatatacgcgaagtctgaaaaattaaccctgtaattaaataatatgtattctga 15959153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 36292574 - 36292492
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatc 208  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||  |||||||||| |||||  |||||||||||||||||||||    
T  36292574 tggcggagccaggaaatttatggagtccgggcgaaaaatttatcccaaattcacatttgaca--atatataaacagtcataaatc 36292492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 192835 - 192764
Alignment:
Q  289 atagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataaca 360  Q
    ||||||||| | ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||    
T  192835 atagggttacttattgaaattgaccttgtaatatacgtaaagtctgaaaattaaccctgtaattaaataaca 192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 204170 - 204073
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata--aacagtcataaatcgaaata 214  Q
    ||||||||||||| ||| || ||||| || || |||| ||||||| |||||||||||||||||||||| |||||||  || ||||||||||| |||||    
T  204170 agcagtggcggagtcagaaattttatagaacctgggcgaaaaatttatcgtaaattcacatgtgacataatatataataatagtcataaatcaaaata 204073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 2985919 - 2985846
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| | ||| ||||| |||| ||||||| ||||||||||||||||||| || |||||||    
T  2985919 cagtggcggagccaggaattatatagagcctgggcgaaaaatttatcgtaaattcacatgtgaaataatatata 2985846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 17330968 - 17331012
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  17330968 agcagtggcggagccaggaaatttatggagcccgggcgaaaaatt 17331012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 4306673 - 4306746
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  4306673 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 4306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 15497447 - 15497520
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  15497447 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 15497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 33431515 - 33431462
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  33431515 cagtggcggagccagaaaatttatggagcccgggcgaaaaatttatcctaaatt 33431462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 1280848 - 1280804
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  1280848 aaattcacatgtgacataatatataaatagtcataaatcgaaata 1280804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 31681560 - 31681508
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  31681560 agtggcggagccagaaaatttatggagcccgggcgaaaaatttatcctaaatt 31681508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 192910 - 192852
Alignment:
Q  156 aaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||| |||| |||||||||||| |||| ||||||||||| ||||||||| |||||    
T  192910 aaaaaatttatcgcaaattcacatgtaacataatatataaacaatcataaatcaaaata 192852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 27168711 - 27168755
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||    
T  27168711 aaattcacatttgacataatatataaatagtcataaatcgaaata 27168755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 14317196 - 14317129
Alignment:
Q  127 cggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||| | ||| ||||| || | ||||||| |||| ||||||||||||||||| |||||||    
T  14317196 cggagccaggaattatatagagcctggacgaaaaatttatcgcaaattcacatgtgacataatatata 14317129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 31649079 - 31649118
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaa 159  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  31649079 gcagtggcggagccaggaaatttatagagcctgggcaaaa 31649118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 1280811 - 1280761
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    ||||||||||||||| |  | ||||||||||||||||| ||||||||||||    
T  1280811 tcgaaataaaagaggctcgtaattttgtcaacaaaagtacaatttaaaata 1280761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 22712814 - 22712852
Alignment:
Q  176 acatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  22712814 acatgtgacatgatatataaatagtcataaattgaaata 22712852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 23244429 - 23244522
Alignment:
Q  122 agtggcggagccaggaaa-tttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||| ||||||||||| ||||| ||||  | | ||||| ||||||| ||||| ||||| ||||| ||||||||| || ||||||| ||||||    
T  23244429 agtggcagagccaggaaattttatagagcatgagaaaaaatttaatcgcaaatttacatgcgacataatatataaatagccataaattgaaata 23244522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 36704750 - 36704791
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaa 160  Q
    ||||||||||||||||| |||||||| ||||| |||||||||    
T  36704750 agcagtggcggagccagaaaatttatagagcctgggcaaaaa 36704791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 37255823 - 37255782
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||||||||||||| ||||| ||||| |||||||    
T  37255823 agtggcggagccaggaaatttagggagctcgggcgaaaaatt 37255782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 42013506 - 42013469
Alignment:
Q  28 aagacaaaaaattgttcaatatcataaaagtttgtcat 65  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  42013506 aagaccaaaaattgttcaatatcataaaagtttatcat 42013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 12277828 - 12277872
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||| |||||||||  ||||||||||||||||||||| |||||||    
T  12277828 agcaatggcggagcagggaaatttatggagcccgggcgaaaaatt 12277872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 42443188 - 42442940
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||     
T  42443188 cagtggcggagtcaggaaatttatggagttcggacaaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcgaaatattttt- 42443090  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||| |            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  42443089 ttttttct----aaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaat 42442994  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  42442993 atacgtgaagtctgaaaatggaccatgtaattaaataacatgtattatgaccat 42442940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 17443986 - 17444247
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||    
T  17443986 gcagtggcggagccagcaaatttatggagtctgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgattttttttt 17444085  T
Q  220 --attttt--tatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 312  Q
      ||||||  |||||             || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  17444086 taatttttattattttacctaaaaaaaatcaaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattgac 17444185  T
Q  313 catataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17444186 cacgtaatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 17444247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 6402767 - 6403015
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||    
T  6402767 gcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcga----ttttt 6402862  T
Q  220 attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataa 319  Q
     |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  |||    
T  6402863 tttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaa 6402960  T
Q  320 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6402961 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 6403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 16406326 - 16406084
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||    |||||     
T  16406326 cagtggcggagtcagaaaatttatggagtccggacaaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaattga----tttttt 16406231  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||| ||  |          |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16406230 ttttctaaataaa-------tcgaaataaaagaggtttatcattttgttaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaat 16406138  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  16406137 atacgtgaagtctgaaaattcaccatgtaattaaataacatgtattctgaccat 16406084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 41250588 - 41250844
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     |||||||     
T  41250588 cagtggcggagccagaaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatttttttatttttt 41250687  T
Q  221 ttttttatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatat 317  Q
    ||| ||||||             || ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  |    
T  41250688 tttattattttacctaaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaattaaccacgt 41250787  T
Q  318 aatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41250788 aatatacgtgaagtctgaaaattgaccatgtaattaaataacatgtattctgaccat 41250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 121 - 368
Target Start/End: Original strand, 31580687 - 31580942
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaa--------- 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||| ||||||||||||             
T  31580687 cagtggcggagccagaaaatttatggagcccgggcaaaaaattaatcataaactcatatgtgacataatatataaacaatcataaatcgaattttttttt 31580786  T
Q  212 atatttttattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattga 311  Q
    ||||||||||||||| | |          |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  31580787 atatttttatttttt-tatcctaaaaaaatcgaaataaaggaggtttatcatttcgtcaacaaaaatacaatttaaaatagggttattaattgaaattga 31580885  T
Q  312 ccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattct 368  Q
    |||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31580886 ccacgtaatatacgtgaagtctgaaaattgtccctgtaattaaataacatgtattct 31580942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 124 - 374
Target Start/End: Complemental strand, 18982740 - 18982499
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattt 223  Q
    |||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||         |||    
T  18982740 tggcggagtcagaaaatttatggagcctgggcaaaaaataaatcgtaaattcacatgcgacataatatataaacagtcataaattgaa---------ttt 18982650  T
Q  224 tttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatata 323  Q
    ||| |            |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||  |||||||    
T  18982649 tttttccctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaatttaccacgtaatata 18982550  T
Q  324 cgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18982549 cgtgaagtctgaaaatttaccctgtaattaaataacatgtattctgaccat 18982499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 122 - 374
Target Start/End: Complemental strand, 2287114 - 2286862
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata------- 214  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||| |           
T  2287114 agtggcggagtcaggaaatttatggagttcgggcaaaaaattaatcataaattcacatgtgacatactatataaacagttataaatcaaaaaaaaattat 2287015  T
Q  215 tttttattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    |||||||||||| ||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2287014 tttttatttttttttctaaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 2286915  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      |       ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2286914 cgt-------gtgaagtatgaaaattgaccctgtaattaaataacatgtattctgaccat 2286862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 134 - 374
Target Start/End: Original strand, 8058317 - 8058555
Alignment:
Q  134 aggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatt--ttttatttn 231  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||| |||| |||||| ||||||||||||||||||||||||| ||  ||||| ||     
T  8058317 aggaaatttatggagcctgggcaaaaaatttatcgcaaattcacatgttacataatatatcaacagtcataaatcgaaatattttttttaattttaatta 8058416  T
Q  232 nnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagt 331  Q
             | |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||| ||||||| |||||||    
T  8058417 aaaaa----ttgaaataaaagaggtttatcattttgtcaacaatagtacaatttaaaataggattattaattgaaattgatcatgtaatatatgtgaagt 8058512  T
Q  332 ctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||  | ||||||||||||||||||||| |||||||    
T  8058513 ctgaaaattggtcttgtaattaaataacatgtattttgaccat 8058555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 35963888 - 35963645
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| || || ||||||||||| |||||||||||      |||     
T  35963888 cagtggcggagtcaggaaatttatggagcccgagcgaaaaattaatcgtaaattcacatgcgatataatatataaacaatcataaatcga------tttt 35963795  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    ||||||  |           ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |  ||||    
T  35963794 ttttttcct---aaaaaaaatcgaaataaaagaggtt-atcattttgtcaacaaaagtacaacttaaaatagggttattaattgaaattgacaacgtaat 35963699  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35963698 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattcttaccat 35963645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 241 - 386
Target Start/End: Complemental strand, 771822 - 771677
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  771822 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatataagtgaagtcggaaaatt 771723  T
Q  341 gaccctgtaattaaataacatgtattctgaccatatttttcgagat 386  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||    
T  771722 gaccatgtaattaaataacatgtattctgaccatataattcgagat 771677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 32126267 - 32126400
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  32126267 tcgaaataaaagagatttatcattttgtcaacaaaagtacagtttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaatt 32126366  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||| ||||||||||||||||||||||||||||    
T  32126367 gaccccgtaattaaataacatgtattctgaccat 32126400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 45419668 - 45419537
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||| |||||||     
T  45419668 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctaaaaattgg 45419569  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||||||||||||||| |||||||    
T  45419568 ccatgtaattaaataacatgtattttgaccat 45419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 309
Target Start/End: Original strand, 26161698 - 26161880
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||||| | ||||||| ||||||||||     
T  26161698 cagtggcggagccaggaaatttatggagcccgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaattataaatccaaatattttt- 26161796  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaatt 309  Q
    |||  ||             | ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  26161797 tttccta-----aaaaaaaattgaaataaaataggtttatcattttgtcaataaaagtacaatttaaaatagggttattaattgaaatt 26161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 244 - 375
Target Start/End: Original strand, 7071611 - 7071742
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattga 342  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||   ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7071611 aaataaaagaggttcctcattttgtcaacagaagtacaatttaaaataaatttattaattgaaattgaccat-taatatacgtgaagtctgaaaaattga 7071709  T
Q  343 ccctgtaattaaataacatgtattctgaccata 375  Q
    |||| ||||||||||||||||||||||| ||||    
T  7071710 ccctataattaaataacatgtattctgaacata 7071742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 241 - 370
Target Start/End: Complemental strand, 26238703 - 26238573
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaa-t 339  Q
    |||||||||||||||||  |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||| |    
T  26238703 tcgaaataaaagaggttcctcatttcgtcaagaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacacgaagtttgaaaatt 26238604  T
Q  340 tgaccctgtaattaaataacatgtattctga 370  Q
    ||||| | |||||||||||||||||||||||    
T  26238603 tgaccatataattaaataacatgtattctga 26238573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 26238789 - 26238696
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| |||||||||||||||||||||||||  | ||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  26238789 cagtggcggagccagaaaatttatggagcccgggcaaaaaaaaattcgcaaattcacatgcgacataatatataaacagtcataaatcgaaata 26238696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 32126182 - 32126274
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||| || | |||||||||||||||||||||||||    
T  32126182 agtggcggagccagaaaatttatggagctcgggcaaaaaattaattctaaattcacatgtgatataaaatataaacagtcataaatcgaaata 32126274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 4554296 - 4554388
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||| ||||||||||||||| | |||||||||||| |||||||||| | ||||||||| ||||||||| |||||||||||||||||    
T  4554296 agtggcggagctaggaaatttatggagtctgggcaaaaaatttatcgtaaatttagatgtgacataatatataaatagtcataaatcgaaata 4554388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 17090226 - 17090313
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaa 211  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||| || ||||||||||||||    
T  17090226 tggcagagccaggaaatttatggagtccgggcaaaaaatttatcgtaaattcacatatgacataatatatcaatagtcataaatcgaa 17090313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 17035712 - 17035815
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||| ||| |||||||||||||||| ||||||||||| || ||||||||||||||| |||||| |||||| || |||||||||||||| | |||||     
T  17035712 cagtggcagagtcaggaaatttatggagtccgggcaaaaagtttatcgtaaattcacatatgacataatatatcaatagtcataaatcgaattttttttt 17035811  T
Q  221 tttt 224  Q
    ||||    
T  17035812 tttt 17035815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 4554381 - 4554463
Alignment:
Q  241 tcgaaataaaaga-ggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatat 322  Q
    ||||||||||| | ||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||    
T  4554381 tcgaaataaaataaggtttctcattttgtcaacaaaaatacaatttaaaatatggttattaattgaaattgaccatgtaatat 4554463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 7071522 - 7071615
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||| |||||||||  |||||||||||||||| |||||| || |||| ||||||||||||||||| ||| |||||||||||||| || |||||    
T  7071522 cagtgtcggagccagagaatttatggagcccggccaaaaattttatcgcaaattcacatgtgacataatacataaacagtcataagtcaaaata 7071615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 12755981 - 12756050
Alignment:
Q  305 aaattgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||| | ||||||||||||||  || ||||||||||||||||||||| |||||||    
T  12755981 aaattgaccatataatatatgcgaagtctgaaaattagccatgtaattaaataacatgtattttgaccat 12756050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 772336 - 772269
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatata 192  Q
    ||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||| || |||||    
T  772336 ggcggagccaggaaatttatggagcccgggcaaaaaaattatcgcaaattcacatatgaaataatata 772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 26655688 - 26655759
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||  || ||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  26655688 gtggcggagccaaaaattttatagagcctgggcaaaaaatttatcgtaaattcacatgtgacataatatata 26655759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 45122279 - 45122217
Alignment:
Q  152 gggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| |||| |||||||||||||| || |||||||||||||||||||| ||||||    
T  45122279 gggcaaaaaatttatcgcaaattcacatgtgatataatatataaacagtcataaattgaaata 45122217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 26656286 - 26656336
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  26656286 tcgaaataaaagaggtatgtcattttgtcaacaaaagtacaatttaaaata 26656336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 42755571 - 42755643
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||||| | ||| ||||| |||| ||||||| |||| |||||||||||||| || |||||||    
T  42755571 agtggcggagccaggaattatatagagcctgggcgaaaaatttatcgcaaattcacatgtgatataatatata 42755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 12755937 - 12755984
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaat 290  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  12755937 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaat 12755984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 18425814 - 18425908
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    |||||||||| |||||| ||||| || |  |||||||||| | |||| |||||||||||||||||   ||||||||| ||||| |||||||||||    
T  18425814 agtggcggagtcaggaattttatagaacttgggcaaaaaaattatcgcaaattcacatgtgacataatatatataaatagtcagaaatcgaaata 18425908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 12755831 - 12755873
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  12755831 cagtggcggagccaggaaatttatggagctcgggcgaaaaatt 12755873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 17035840 - 17035882
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaat 283  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  17035840 tcgaaataaaagaggtttctcattttgtcaacaaaagtacaat 17035882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 17090348 - 17090390
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaat 283  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  17090348 tcgaaataaaagaggtttctcattttgtcaacaaaagtacaat 17090390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 26161876 - 26161914
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26161876 aaattcaccctgtaattaaataacatgtattctgaccat 26161914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 35649537 - 35649607
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||| || ||||| |||   ||||||||| ||||||| ||||||||||||||||| |||||||    
T  35649537 tggcggagccagaaattttatagagtttgggcaaaaatttaatcgcaaattcacatgtgacataatatata 35649607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 19951740 - 19951784
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  19951740 aaattcacatgtaacataatatataaatagtcataaatcgaaata 19951784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 31393065 - 31393021
Alignment:
Q  167 cgtaaattcacatgtgacatgatatataaacagtcataaatcgaa 211  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||    
T  31393065 cgtaaatttacatgtgacataatatataaatagtcataaatcgaa 31393021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 44084131 - 44084174
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||||||| |||||||||||||| |||| |||||||    
T  44084131 gcagtggcggagccagaaaatttatggagcctgggcgaaaaatt 44084174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 45419778 - 45419735
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||    
T  45419778 gcagtggcggagtcagaaaatttatggagcccgggcgaaaaatt 45419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 31162097 - 31162135
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaa 159  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  31162097 cagtggcggagccaggaaatttatagagcctgggcaaaa 31162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 40653795 - 40653837
Alignment:
Q  152 gggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||| ||||||| |||||||||||||||||||||| |||||||    
T  40653795 gggcgaaaaatttatcgtaaattcacatgtgacataatatata 40653837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 45122222 - 45122152
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
    ||||||| ||| |||| ||||||| ||||||||||| ||  |||||||||||||| | ||| |||||||||    
T  45122222 gaaataatagaagtttctcattttatcaacaaaagtacatattaaaatagggttaattattaaaattgacc 45122152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 13829439 - 13829394
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgt 62  Q
    ||||||||| ||| |||||||||| ||||||||||||||| |||||    
T  13829439 aaaaatcatataaaacaaaaaattattcaatatcataaaaatttgt 13829394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 15219585 - 15219622
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataa 54  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  15219585 aaaaattatttaagacaaaaaattattcaatatcataa 15219622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 17372967 - 17373016
Alignment:
Q  301 attgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    ||||||||||||||| ||||||| ||||| |||||||| ||||| |||||    
T  17372967 attgaaattgaccatgtaatatatgtgaattctgaaaaatgaccatgtaa 17373016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 27925653 - 27925698
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaatat 215  Q
    ||||||||||||||||||||||||||| ||| ||| || |||||||    
T  27925653 aaattcacatgtgacatgatatataaatagttatagattgaaatat 27925698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 18829936 - 18829884
Alignment:
Q  291 agggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    ||||||| | ||||||||||||||| ||||||| || ||||||||||| ||||    
T  18829936 agggttaattattgaaattgaccatgtaatatatgtaaagtctgaaaaatgac 18829884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 45261753 - 45261797
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||| || ||||||||| ||||||||||| |||||    
T  45261753 aaattcacatgtgatataatatataaatagtcataaatctaaata 45261797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 119 - 374
Target Start/End: Original strand, 34083073 - 34083333
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |   |    
T  34083073 agcagtggcggagctaggaaatttatggagtccgggaaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcaaaaaaaaat 34083172  T
Q  219 tattttttatttnnnnnnnnnn------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 312  Q
    ||||||||||||                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34083173 tattttttattttttttcctaaaaaaaatcgaaa-aaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 34083271  T
Q  313 catataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34083272 cacgtaatatacttgaactctgaaaattgaccctgtaattaaataacatgtattctgaccat 34083333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 39772995 - 39772746
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||  | ||||||    
T  39772995 cagtggcggagctaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacaatcataaatcgattttttttta 39772896  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    ||||   |            || ||||||| || |||||||||||| ||||||||||  |||||||||||||||||||||||| ||||| ||||  ||||    
T  39772895 ttttacct----aaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaat 39772800  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39772799 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 39772746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 40080710 - 40080953
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| | |||||||||||      |||     
T  40080710 cagtggcggagccaggaaatttatggagcc-gggcaaaaaattaaacgtaaattcacatgtgacataatatataaataatcataaatcga------tttt 40080802  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    ||||||  |           ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||    
T  40080803 ttttttcct---aaaaaaaatcgaaataaaaaaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaat 40080899  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  40080900 atacgtgaagtctgaaaattgaccatataattaaataacatatattctgaccat 40080953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 22967394 - 22967655
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||  | |||||    
T  22967394 gcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaactcacatgtgacataatatataaacagtcgtaaattgattttttttt 22967493  T
Q  220 --attttt--tatttnnnnnnnnnn---tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 312  Q
      ||||||  |||||             || | ||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||    
T  22967494 taatttttattattttacctaaaaaaaatcaacataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaac 22967593  T
Q  313 catataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22967594 cacgtaatatacgtgaagtttgaaaattgaccctgtaattaaataacatgtattctgaccat 22967655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 19391231 - 19391102
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  19391231 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagg-ttattaactgaaattgaccacgtaatatacgtgaagtctgaaaattgac 19391133  T
Q  344 cctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||    
T  19391132 cctgtaattaaataacatgtattctgaccat 19391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 119 - 374
Target Start/End: Original strand, 19564473 - 19564729
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||| |||||||| ||||||||||||||||| ||||| ||||||| |||| || |||| ||||||||  |||||||||||||||||||||||  | ||||    
T  19564473 agcactggcggagtcaggaaatttatggagctcgggcgaaaaatttatcgcaacttcaaatgtgaca--atatataaacagtcataaatcgatttttttt 19564570  T
Q  219 tat--tttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccata 316  Q
    | |  ||||| ||           ||||||||||| || ||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||     
T  19564571 tttaattttttttcctcaaaaaaatcgaaataaaaaagatttatcattttgtcatcaaaagtacaatgtaaaatatggttattaattgaaattgaccatg 19564670  T
Q  317 taatatacgtgaagtctgaaaattgaccctgt-aattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  19564671 taatatacgtgaagtctgaaaattgaccttgtgaattaaatcacatgtattttgaccat 19564729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 243 - 369
Target Start/End: Complemental strand, 35515082 - 35514956
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  35515082 gaaataaaaaaggtttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattta 35514983  T
Q  343 ccctgtaattaaataacatgtattctg 369  Q
    |||||||||||||||||||||||||||    
T  35514982 ccctgtaattaaataacatgtattctg 35514956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 6268503 - 6268633
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  6268503 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtctgaaaattgac 6268602  T
Q  344 cctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||||||||    
T  6268603 cttgtaattaaataacatgtattctgaccat 6268633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 45184066 - 45183935
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  45184066 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 45183967  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| |||||||    
T  45183966 ccctgtaattaaataacatgtattttgaccat 45183935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 11017349 - 11017482
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||||    
T  11017349 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaatcgaccatgtaatatatgtgaagtctgaaaatt 11017448  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    | |||||||||||||||||||||||| |||||||    
T  11017449 ggccctgtaattaaataacatgtattttgaccat 11017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 243 - 366
Target Start/End: Original strand, 6929975 - 6930098
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||| ||||| ||||||  ||||||||||||||||||    
T  6929975 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaatttaccatgtaatatgtgtgaagtctgaaaattga 6930074  T
Q  343 ccctgtaattaaataacatgtatt 366  Q
    ||||||||||||||||||||||||    
T  6930075 ccctgtaattaaataacatgtatt 6930098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 1185591 - 1185698
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattga 342  Q
    ||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  1185591 aaataaaagaggttccttattttgtcaacaaaagtgaaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 1185690  T
Q  343 ccctgtaa 350  Q
    ||||||||    
T  1185691 ccctgtaa 1185698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 45336924 - 45336812
Alignment:
Q  263 ttttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgt-aattaaataacat 361  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||| |||||||| ||||    
T  45336924 ttttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaagtaaccttgtaaattaaatcacat 45336825  T
Q  362 gtattctgaccat 374  Q
    ||||||| |||||    
T  45336824 gtattctaaccat 45336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 244 - 370
Target Start/End: Complemental strand, 5136377 - 5136252
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattga 342  Q
    ||||||||||||||  ||| ||||||||||||| | |||||||||||||| |||||||||||||||||  || ||||||||||||| |||| ||||||||    
T  5136377 aaataaaagaggttc-tcagtttgtcaacaaaaatacaatttaaaataggattattaattgaaattga-tatgtaatatacgtgaaatctgaaaaattga 5136280  T
Q  343 ccctgtaattaaataacatgtattctga 370  Q
    ||||||||||||||||| ||| ||||||    
T  5136279 ccctgtaattaaataacgtgtcttctga 5136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 1185501 - 1185595
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaa-ttcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| ||||||||| || |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  1185501 cagtggcggagccagaaaatttatgaagtccgggcaaaaaatttatcgtaaatttcacatgtgacataatatataaacagtcataaatcaaaata 1185595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 33041998 - 33041905
Alignment:
Q  281 aatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||| ||||||| ||||||||| |||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  33041998 aattttaaataggattattaattaaaattgactatgtaatatatgtgaagtctgaaaattggccctgtaattaaataacatgtattttgaccat 33041905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 128 - 303
Target Start/End: Complemental strand, 27936346 - 27936177
Alignment:
Q  128 ggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatttttta 227  Q
    ||||| |||||||||||||||  ||||||||||||| |||| |||||||||||||| || ||||||||||| ||||||||| ||||   |||||||||      
T  27936346 ggagcaaggaaatttatggagttcgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaatcataaatccaaat---tttatttttcc 27936250  T
Q  228 tttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaatt 303  Q
    |             |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  27936249 t---caaaaaaaaccgaaataaaataggtttatcattttgtcaacaaaagtaaaatttaaaatagggttattaatt 27936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 6502718 - 6502772
Alignment:
Q  312 ccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtatt 366  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  6502718 ccatataatatacgtgaagtctgaaaattggccctgtaattaaattacatgtatt 6502772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 11017244 - 11017290
Alignment:
Q  117 ttagcagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11017244 ttagcagtggcggagccaggaaatttacggagcccgggcgaaaaatt 11017290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 48757333 - 48757407
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  48757333 gcagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 48757407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 6891562 - 6891489
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  6891562 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 6891489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 6929867 - 6929920
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||| |||||    
T  6929867 cagtggcggagccaggaaatttatggagcctgggcgaaaaatttatcgcaaatt 6929920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 19269162 - 19269235
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  19269162 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 19269235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 43137356 - 43137306
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    |||||||||||||||||| ||||||| ||||||||| | ||||||||||||    
T  43137356 tcgaaataaaagaggtttgtcattttttcaacaaaaatacaatttaaaata 43137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 51817858 - 51817928
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||| |  || ||||| || | |||||||||||| ||||||||||||||||| |||||||    
T  51817858 tggcggagccaggaattacatagagcctggacgaaaaattaatcgcaaattcacatgtgacataatatata 51817928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 37516856 - 37516807
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  37516856 agcagtggcggagccaggaattttatagagcctgggcaaaaaatttatcg 37516807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 9743580 - 9743492
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaat 213  Q
    |||||||||||||| |||||  || | ||||||||  || | || |||||||||||| ||||  |||||||| ||||||||||||||||    
T  9743580 ggcggagccaggaattttatatagtctgggcaaaattttgaccgcaaattcacatgttacattgtatataaatagtcataaatcgaaat 9743492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 12910059 - 12910007
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaat 173  Q
    |||||||||||||||||| ||||| ||||| |||||||||||| |||| ||||    
T  12910059 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaat 12910007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 16094278 - 16094338
Alignment:
Q  290 tagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    |||||||| | |||||||||||||   ||||||| | ||||||||||||||||||||||||    
T  16094278 tagggttaattattgaaattgacccagtaatatatgcgaagtctgaaaattgaccctgtaa 16094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 43137393 - 43137349
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||| |||||| || |||||||||||||||||    
T  43137393 aaattcacatgtgacataatatatgaatagtcataaatcgaaata 43137349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 49107178 - 49107130
Alignment:
Q  27 taagacaaaaaattgttcaatatcataaaagtttgtcatgcattattct 75  Q
    |||||||||||||||||| |||||||| ||||||||||||  |||||||    
T  49107178 taagacaaaaaattgttcgatatcatataagtttgtcatgtgttattct 49107130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 5136466 - 5136380
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaat 207  Q
    ||||||| ||| ||||||||||||  |||   | ||||||| | || | ||||||||||||||| | ||||||||||||||||||||    
T  5136466 cagtggcagagtcaggaaatttatatagcttagacaaaaaaattattgcaaattcacatgtgacgtaatatataaacagtcataaat 5136380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 27936174 - 27936136
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  27936174 aaattaaccctgtaattaaatagcatgtattctgaccat 27936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 28625002 - 28625048
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtc 63  Q
    ||||||| | |||||||||||||| ||||||| ||||||||||||||    
T  28625002 aaaaatcttataagacaaaaaattattcaataccataaaagtttgtc 28625048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 37381814 - 37381864
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    |||||||||||||||||  ||| ||||||||||||||| | ||||||||||    
T  37381814 tcgaaataaaagaggttcgtcactttgtcaacaaaagtacgatttaaaata 37381864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 3856726 - 3856819
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| || ||||| ||||| |   ||||  || | || ||||||||||||||||| ||||||||| ||| ||||||| |||||    
T  3856726 cagtggcggagccagaaattttatcgagcctgaataaaattttcaccgcaaattcacatgtgacataatatataaatagttataaatcaaaata 3856819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 14461297 - 14461256
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||    
T  14461297 agtggcggagccaggaattttatagagcctgggcaaaaaatt 14461256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 15668215 - 15668178
Alignment:
Q  167 cgtaaattcacatgtgacatgatatataaacagtcata 204  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  15668215 cgtaaattcacatgtgacataatatataaatagtcata 15668178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41538156 - 41538221
Alignment:
Q  1 tagtattttgttcataaaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    ||||||||||| ||||||||||| | ||| |  ||||||  ||||||||||||||||||| |||||    
T  41538156 tagtattttgtccataaaaaatcgtataaaatcaaaaatcattcaatatcataaaagtttatcatg 41538221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 42035771 - 42035808
Alignment:
Q  27 taagacaaaaaattgttcaatatcataaaagtttgtca 64  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  42035771 taagagaaaaaattgttcaataccataaaagtttgtca 42035808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 44000263 - 44000198
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgt 82  Q
    ||||||| | |||||| ||||||| ||||||| |||||||||||||| || ||| || ||||||||    
T  44000263 aaaaatcgtataagaccaaaaattattcaataccataaaagtttgtcttgtattgttttgtcttgt 44000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17073900 - 17073944
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||| ||||||||| ||||||||| ||||| |||||||||||    
T  17073900 aaattcatatgtgacataatatataaatagtcaaaaatcgaaata 17073944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 29011726 - 29011758
Alignment:
Q  31 acaaaaaattgttcaatatcataaaagtttgtc 63  Q
    |||||||||||||||||||||||||| ||||||    
T  29011726 acaaaaaattgttcaatatcataaaaatttgtc 29011758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 42547463 - 42547495
Alignment:
Q  34 aaaaattgttcaatatcataaaagtttgtcatg 66  Q
    ||||||| |||||||||||||||||||||||||    
T  42547463 aaaaattattcaatatcataaaagtttgtcatg 42547495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 50091586 - 50091490
Alignment:
Q  118 tagcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||| ||||||| ||||| ||||| ||| | | |||||   || |||| |||||||| || ||||| ||||||||| ||||||||||| |||||    
T  50091586 tagcagtagcggagctaggaattttatcgagtctgagcaaactttttatcgcaaattcacttgcgacataatatataaatagtcataaatcaaaata 50091490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 126 - 374
Target Start/End: Original strand, 34947798 - 34948038
Alignment:
Q  126 gcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattttt 225  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||     ||| |||||    
T  34947798 gcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaatcgaa-----ttttttttt 34947892  T
Q  226 tatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacg 325  Q
    |  |           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  34947893 tcct---aaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacg 34947989  T
Q  326 tgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34947990 tgaagtctgaaaattgaccatgtaattaaataacatgtattctgaccat 34948038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 121 - 376
Target Start/End: Complemental strand, 29744478 - 29744222
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt- 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || | || |||||||||||||  ||||||||||||||||||||| || | |||||     
T  29744478 cagtggcggagccaggaaatttatggagcccgggcgaaaaatttattgcaacttcacatgtgaca--atatataaacagtcataaatcaaattttttttt 29744381  T
Q  220 -attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
     ||||||| ||           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||    
T  29744380 aatttttttttcctcaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgagattgaccatgta 29744281  T
Q  319 atatacgtgaagtctgaaaattgaccctgt-aattaaataacatgtattctgaccatat 376  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  29744280 atatacgtgaagtctgaaaattgaccttgtaaattaaatcacatgtattctgaccatat 29744222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 399819 - 399573
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||     |||||     
T  399819 cagtggcggagccaggaaatttatggagcttgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcg-----tttttt 399725  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  399724 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 399627  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  399626 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 399573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 33228430 - 33228564
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33228430 tcgaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 33228529  T
Q  341 gaccctgt-aattaaataacatgtattctgaccat 374  Q
    |||| ||| |||||||| |||||||||||||||||    
T  33228530 gaccttgtaaattaaatcacatgtattctgaccat 33228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 13838884 - 13838754
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgac 343  Q
    ||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  13838884 aaataaaagagatttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgac 13838785  T
Q  344 cctgtaattaaataacatgtattctgaccat 374  Q
    | ||||||||||||||||||||||| |||||    
T  13838784 catgtaattaaataacatgtattctaaccat 13838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 28997815 - 28997684
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||     
T  28997815 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 28997716  T
Q  343 ccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||| |||||||    
T  28997715 ccctgtaattaaataacatgtattttgaccat 28997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 31028033 - 31028163
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaat 339  Q
    |||||||||||||||||  | ||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||| |||||    
T  31028033 tcgaaataaaagaggttccttattttgtcaacaaaagtacaatttaaaatatggctattaattgaaattgaccatgtaatatacgtgaagtctgaaaaat 31028132  T
Q  340 tgaccctgtaattaaataacatgtattctga 370  Q
     ||| |||||||||||||| |||||||||||    
T  31028133 cgacgctgtaattaaataatatgtattctga 31028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 386
Target Start/End: Complemental strand, 34253186 - 34253075
Alignment:
Q  273 aaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgacc 372  Q
    |||||| |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||| | ||| |||  ||||||||||||||||    
T  34253186 aaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgaccatttaaataa--aacatgtattctgacc 34253089  T
Q  373 atatttttcgagat 386  Q
    || | |||||||||    
T  34253088 atgtatttcgagat 34253075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 33228298 - 33228385
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga 210  Q
    ||||||||||||||||||||||||||| ||| ||| || |||| ||| |||||||||| ||||||  |||||||||||||||||||||||    
T  33228298 cagtggcggagccaggaaatttatggatcccaggcgaacaatttatcataaattcacacgtgaca--atatataaacagtcataaatcga 33228385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 25599469 - 25599378
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||| |  |||||||| ||||| ||||||||  || | || ||||||||||| ||||||||||||||| |||||||||||||||||    
T  25599469 gtggcggagctaaaaaatttatcgagcctgggcaaaattttgaccgcaaattcacatgcgacatgatatataaatagtcataaatcgaaata 25599378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 24074711 - 24074656
Alignment:
Q  140 tttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataa 195  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  24074711 tttatagagcccgggcgaaaaatttatcgtaaattcacatgtgacataatatataa 24074656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 34253314 - 34253232
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataa 205  Q
    ||||||||||||||||||||| ||||   | || ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  34253314 agtggcggagccaggaaatttgtgga-ttcaggtaaaaaattaattgtaaattcacatgtgacataatatataaatagttataa 34253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 29203042 - 29203103
Alignment:
Q  5 attttgttcataaaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    ||||||| || ||||| |||| ||||||||| |||||||||||||||||||| |||||||||    
T  29203042 attttgtccacaaaaattcatataagacaaataattgttcaatatcataaaaatttgtcatg 29203103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 32441833 - 32441926
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||  || || |||||||||||  || ||||  || || | ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  32441833 cagtggcggagttagaaattttatggagcctcggtaaaattttgattgcaaattcacatgcgacataatatataaatagtcataaatcgaaata 32441926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 11971244 - 11971188
Alignment:
Q  152 gggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatc 208  Q
    ||||||||  |||| || ||||||||||||||||| ||||||||| |||||||||||    
T  11971244 gggcaaaattttaaccgcaaattcacatgtgacataatatataaatagtcataaatc 11971188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 30621480 - 30621388
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||| ||||| ||||| |||   |||||||   || |||| ||||||||||| ||||| ||||||||| ||||||||||| |||||    
T  30621480 agtggcggagctaggaattttatcgagtttgggcaaagttttgatcgcaaattcacatgcgacataatatataaatagtcataaatcaaaata 30621388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 12180430 - 12180472
Alignment:
Q  172 attcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||    
T  12180430 attcacatgcgacataatatataaatagtcataaatcgaaata 12180472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 28997923 - 28997881
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  28997923 cagtggcggagtcaggaaatttatggagctcgggcgaaaaatt 28997881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 27824778 - 27824827
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    ||||||||| |||||  ||||||| ||||||| |||||||||||||||||    
T  27824778 aaaaatcatataagatcaaaaattattcaataccataaaagtttgtcatg 27824827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 34385004 - 34385077
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||| || |   | ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  34385004 cagtggcggagccagaaattacgtagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 34385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 10232342 - 10232282
Alignment:
Q  290 tagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    |||||||| | ||||||||||||||| | ||||| | |||||||||||| ||||| |||||    
T  10232342 tagggttaattattgaaattgaccatgttatatatgcgaagtctgaaaaatgaccttgtaa 10232282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 13838977 - 13838925
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaatt 174  Q
    |||||||||||||||||||||| | || | ||||||| |||||||| ||||||    
T  13838977 agtggcggagccaggaaatttaagaagtctgggcaaagaattaatcttaaatt 13838925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 120 - 374
Target Start/End: Complemental strand, 7434622 - 7434375
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||            
T  7434622 gcagtggcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaatcgaa-------- 7434531  T
Q  220 attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataa 319  Q
     |||||| ||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  7434530 -tttttttttcctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacaacgtaa 7434432  T
Q  320 tatacgtgaagtctgaaaattgaccctgtaattaaataac--atgtattctgaccat 374  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  7434431 tatacgtgaagtctgaaaattgaccatgtaattaaataacatatgtattctgaccat 7434375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 17446505 - 17446248
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||| |||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| |||||| |||||||||||||||| | ||||||     
T  17446505 cagtggcggagtcaggaaatttatggagcccgagcaaataatttatcgcaaattcacatgtgacataatatatcaacagtcataaatcgatacatttttt 17446406  T
Q  221 t--tttttatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccata 316  Q
    |  |||| ||||            || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  17446405 taattttaattttaactaaaaaaatcaaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattgaaattgaccatg 17446306  T
Q  317 taatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  17446305 taatatacgtgaagtctgaaaattggccatgtaattaaataacatgtattctgaccat 17446248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 123 - 374
Target Start/End: Complemental strand, 23314206 - 23313949
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt--- 219  Q
    |||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||       
T  23314206 gtggcggagc-aggaaatttatggagcc-ggacaaataattaatcgtaaattcacatgtaatattatatataaacagtcataaatcgaaatatttttttt 23314109  T
Q  220 ---attttttatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
       ||||||| |||            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23314108 ttaattttttttttccctaaaaaaaatcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacca 23314009  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23314008 cgtaatatacgtgaagtctgaaaattgaccatgtaattaaataacatgtattctgaccat 23313949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 125 - 374
Target Start/End: Original strand, 32981008 - 32981270
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata-----ttttt 219  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||     |||||    
T  32981008 ggcggaaccaggaaatttatggagtccgagcaaaaaattaatcgtaaattcacatgtgacataatatataaatagtcataaatcgaaataattttttttt 32981107  T
Q  220 attttttatttnnnnnnnnnn--------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattga 311  Q
    | || ||||||                  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32981108 aattattatttttttttcctaaaaaaaaattgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattga 32981207  T
Q  312 ccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||   |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  32981208 ccgcctaatatacgtgatgtctgaaaattgaccatgtaattaaataacatgtattctgaccat 32981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 122 - 374
Target Start/End: Original strand, 42309899 - 42310153
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttat 221  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |    | |    
T  42309899 agtggcggagccaggaaatttatggagcttgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaattgaaagaaaaattt 42309998  T
Q  222 tttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataata 321  Q
    ||||| ||           | ||||||||||| |||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||  |||||    
T  42309999 ttttt-ttcctaaaaaaaattgaaataaaagatgtttatcattttgtaaacaaaagtacaatttaaaatatgattattaattgaaattgaccacgtaata 42310097  T
Q  322 tacgtgaagtctgaaaattgacc---ctgtaattaaataacatgtattctgaccat 374  Q
    ||| |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  42310098 tacatgaagtctgaaaattgaccctgctgtaattaaataacatgtattctgaccat 42310153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 15209367 - 15209497
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaat 339  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15209367 tcgaaataaaagaggttcatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaat 15209466  T
Q  340 tgaccctgtaattaaataacatgtattctga 370  Q
    |||||||||||||||||||||||||||||||    
T  15209467 tgaccctgtaattaaataacatgtattctga 15209497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 11957437 - 11957570
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  11957437 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatatgtgaagtctgaaaatt 11957536  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
     |||||| ||||||||||||||||||||||||||    
T  11957537 aaccctgcaattaaataacatgtattctgaccat 11957570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 244 - 370
Target Start/End: Original strand, 41971337 - 41971464
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattga 342  Q
    ||||||||||||||  || ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  41971337 aaataaaagaggttcctcgttttgacaacaaaagtacaatttaaaatagggttgttaattgaaattgaccatataatatacgtgaagcctgaaaaattga 41971436  T
Q  343 ccctgtaattaaataacatgtattctga 370  Q
    ||||||||||||||||||||||||||||    
T  41971437 ccctgtaattaaataacatgtattctga 41971464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 33490441 - 33490340
Alignment:
Q  268 tcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctg-aaaattgaccctgtaattaaataacatgtatt 366  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| || |||||||||||||||||||||    
T  33490441 tcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtatgaaaaattgcccatgtaattaaataacatgtatt 33490342  T
Q  367 ct 368  Q
    ||    
T  33490341 ct 33490340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 320668 - 320772
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||     
T  320668 cagtggcggagccaggaaatttatggagcccgggcaaaaattgtatcgcaaattcacatgtgacataatatataatcagtcataaatcgaaataattttt 320767  T
Q  221 ttttt 225  Q
    |||||    
T  320768 ttttt 320772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 123 - 313
Target Start/End: Complemental strand, 3830151 - 3829968
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttatt 222  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||  || |  ||||||||||  ||||||||| | ||||||||  |    
T  3830151 gtggcggagccaggaaatttatggagctcgggcaaaaaatttatcgcaaattcacatcagata--atatataaacgatcataaatccatatattttt--t 3830056  T
Q  223 ttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
    ||||  |           ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3830055 ttttcct---aaaaaaaatcgaaataaaataggtttataattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacc 3829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 35908644 - 35908549
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaa 336  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| |||||||| || ||||||| ||||||||||||    
T  35908644 tcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgacaatgtaatatatgtgaagtctgaa 35908549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 41971250 - 41971341
Alignment:
Q  123 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||||||||||||||| || | ||||||||| |||| ||||||||||||||||| |||||||||||||||||| || |||||    
T  41971250 gtggcggagccaggaaatttatggagtccagacaaaaaatttatcgcaaattcacatgtgacataatatataaacagtcataactcaaaata 41971341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 26159424 - 26159361
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtga 183  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  26159424 gcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtga 26159361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 15209283 - 15209374
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||| ||||||||||||||||| ||||||| || | || ||||||||||||||||| ||||||||  |||||||||||||||||    
T  15209283 cagtggcggagccaagaaatttatggagcccgagcaaaaattttaacgcaaattcacatgtgacataatatataa--agtcataaatcgaaata 15209374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 33490550 - 33490460
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||| ||||||||||||| |  |||||||| |||| || | ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  33490550 tggcggagctaggaaatttatggtgttcgggcaaataatttatagcaaattcacatgcgacataatatataaatagtcataaatcgaaata 33490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 11957304 - 11957390
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaat 207  Q
    ||||||||||||||| ||||||||| ||   |||||||||||| |||| ||||| ||| ||||||| |||||| |||||||||||||    
T  11957304 cagtggcggagccagaaaatttatgaagtttgggcaaaaaatttatcgcaaattaacacgtgacataatatatcaacagtcataaat 11957390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 26272786 - 26272881
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||| ||||||||||| ||| ||||| | ||  |||||||   |||| || ||||| ||||||||||||||||||||| |||||||||||||||||    
T  26272786 agcactggcggagccatgaattttatagtgcatgggcaaatttttaaccgcaaatttacatgtgacatgatatataaatagtcataaatcgaaata 26272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 3829976 - 3829938
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3829976 aaattgaccctgtaattaaataacatgtattctgaccat 3829938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 48900639 - 48900704
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat 186  Q
    |||||||||||||||||| ||  | ||||||||||||||| ||||||| ||||||| |||||||||    
T  48900639 cagtggcggagccaggaatttcttagagcccgggcaaaaatttaatcgcaaattcaaatgtgacat 48900704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 52753718 - 52753767
Alignment:
Q  165 atcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  52753718 atcgtaaattcacatgcgacataatatataaatagtcataaatcgaaata 52753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 35948836 - 35948931
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata--aacagtcataaatcgaaata 214  Q
    |||||||||| |||  |||||||| ||||   ||| ||||||| |||||||||||||||||||||| |||||||  || ||||||||||| |||||    
T  35948836 cagtggcggaaccaaaaaatttatagagcataggcgaaaaatttatcgtaaattcacatgtgacataatatataataatagtcataaatcaaaata 35948931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 30558911 - 30558957
Alignment:
Q  168 gtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  30558911 gtaaattcacatgtgacataatatataaatagtcataaatcaaaata 30558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 17875626 - 17875557
Alignment:
Q  125 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||  || ||||| ||| | |||||||||||| |||| ||||||||||||||||| |||||||    
T  17875626 ggcggagccataaattttatagagtctgggcaaaaaatttatcgcaaattcacatgtgacataatatata 17875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 25017653 - 25017609
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||    
T  25017653 aaatttacatgtgacataatatataaatagtcataaatcgaaata 25017609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 30798855 - 30798931
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgtcttgtaatgtt 93  Q
    ||||||| | |||||| ||||||| ||||||||||||||| ||||| ||  ||| ||||||||||| |||| |||||    
T  30798855 aaaaatcgtataagaccaaaaattattcaatatcataaaattttgttatatattgttctgtcttgttttgtgatgtt 30798931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 32379765 - 32379809
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||||||| |||||||| | |||||||||||||||    
T  32379765 aaattcacatgtgacatgttatataaataatcataaatcgaaata 32379809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 25007691 - 25007644
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    |||||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  25007691 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcg 25007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32467969 - 32468024
Alignment:
Q  1 tagtattttgttcataaaaaatcatttaagacaaaaaattgttcaatatcataaaa 56  Q
    |||| ||||||||| |||||||||| ||||||||||||||  |||||| |||||||    
T  32467969 tagttttttgttcacaaaaaatcatataagacaaaaaattagtcaataccataaaa 32468024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 33468860 - 33468906
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  33468860 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcg 33468906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 35908748 - 35908706
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    |||||||||||||| |||||||| ||||||||||| |||||||    
T  35908748 cagtggcggagccaagaaatttaaggagcccgggcgaaaaatt 35908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 170346 - 170406
Alignment:
Q  156 aaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    |||||||| |||| ||||| |||||||||||   ||||||||| |||||||||||||||||    
T  170346 aaaaaatttatcgcaaatttacatgtgacataatatatataaatagtcataaatcgaaata 170406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 30055137 - 30055044
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||| || ||| ||||| ||| | || |||||  || | || |||||||||| |||||| ||||||||| ||||||||||| |||||    
T  30055137 cagtggcggagtcaagaattttatagagtctggacaaaattttgaccgcaaattcacatatgacataatatataaatagtcataaatcaaaata 30055044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 31867549 - 31867477
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||| |||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  31867549 cagtggcggagcc-ggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 31867477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 39739005 - 39739050
Alignment:
Q  21 atcatttaagacaaaaaattgttcaatatcataaaagtttgtcatg 66  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||    
T  39739005 atcatttgagacaaaaaattgttcaataccataaaaatttatcatg 39739050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 45658831 - 45658750
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtcttgtcttgtaatgttatgtc 98  Q
    ||||||||| ||| |||||||||| |||||   ||||||| |||||||||   ||||||||||||| ||||  |||||||||    
T  45658831 aaaaatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtgctattctgtcttgtgttgtgctgttatgtc 45658750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 37153881 - 37153925
Alignment:
Q  124 tggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    ||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  37153881 tggcggagccaggaattttatagagcctgggcaaaaaatttatcg 37153925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 44305639 - 44305599
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaa 161  Q
    |||||||||||||||||| ||||| ||||| ||||||||||    
T  44305639 cagtggcggagccaggaattttatagagcctgggcaaaaaa 44305599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 48606520 - 48606564
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| |||| ||||||||| |||||||||| ||||||    
T  48606520 aaattcacatgtaacataatatataaatagtcataaattgaaata 48606564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 28524401 - 28524154
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||     
T  28524401 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcga----tttttt 28524306  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  28524305 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 28524208  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28524207 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 28524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 126 - 366
Target Start/End: Original strand, 29727350 - 29727588
Alignment:
Q  126 gcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattttt 225  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||  ||||    
T  29727350 gcggagccaggaaatttatggagtccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgattttttttttatttt 29727449  T
Q  226 tatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacg 325  Q
    ||  |          ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |    
T  29727450 tacctaaaaaaat--tcgaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatatg 29727547  T
Q  326 tgaagtctgaaaattgaccctgtaattaaataacatgtatt 366  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  29727548 tgaagtctgaaaattgacattgtaattaaataacatgtatt 29727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 119 - 374
Target Start/End: Complemental strand, 39915719 - 39915470
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||||    ||||    
T  39915719 agcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaatagtcataaatcga----tttt 39915624  T
Q  219 tattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatata 318  Q
    | |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||    
T  39915623 ttttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgta 39915526  T
Q  319 atatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39915525 atatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 39915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 3647743 - 3648003
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||     
T  3647743 cagtggcagatccaggaaatttatggagtccgggcaaaaaattaatcgtaaattcacatgtg-cataatatataaacagttataaatcaaaatatttttt 3647841  T
Q  221 tt--ttttatttnnnnnnnnnn------tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgac 312  Q
    ||  ||||||||                | ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3647842 ttatttttattttttttcctaaaaaaaattgaattaaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgac 3647941  T
Q  313 catataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    || ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  3647942 cacataatatacatgaagtctgaaaatttaccctgtaattaaataacatgtattttgaccat 3648003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 24019355 - 24019602
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||||    |||||     
T  24019355 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaatagtcataaatcga----tttttt 24019450  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
    |||||||  |          || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  ||||    
T  24019451 ttttttacctaaaaaaaa--tcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaat 24019548  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24019549 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 24019602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 7279240 - 7278981
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaa---tattt 217  Q
    ||||||||||| | ||||||||||||||   |||||||||||| |||| ||||||||||| ||||| |||||| |||| |||||||| ||||   | |||    
T  7279240 cagtggcggagtctggaaatttatggagattgggcaaaaaatttatcgcaaattcacatgcgacataatatatcaacaatcataaattgaaacttttttt 7279141  T
Q  218 ttattttttatttnnnnnnnnnn--tcgaaataaaagaggttt-atcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
    ||| |||| ||||            ||||||||||| |||||| ||||||| |||||||||||| |||||||||||| | ||||||||||||||||| ||    
T  7279140 ttaattttaattttaattaaaaaaatcgaaataaaataggttttatcatttagtcaacaaaagtacaatttaaaataagattattaattgaaattgatca 7279041  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  7279040 tataatatacgtgaagtctgaaaattggccctgtaattaaataacatgtattcttaccat 7278981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 157 - 371
Target Start/End: Complemental strand, 15839454 - 15839231
Alignment:
Q  157 aaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttttattttttatttnnnnnnnnnntcgaaat-----aaaa 251  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||             ||||     ||||    
T  15839454 aaaaattaatagtaaattcaaatgtgacataatatataaacagtcatgaatcgaaatatttttattttttatttttttcctaaaaaaaaattaaataaaa 15839355  T
Q  252 gaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa- 350  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||| | |||||||||||||||||||||||     
T  15839354 gaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattaaaattgaccacgtaatatacttaaagtctgaaaattgaccctgtaat 15839255  T
Q  351 ---ttaaataacatgtattctgac 371  Q
       |||||||||||||||||||||    
T  15839254 taattaaataacatgtattctgac 15839231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 36409572 - 36409439
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36409572 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagg-ttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 36409474  T
Q  341 gaccctgt-aattaaataacatgtattctgaccat 374  Q
    |||| ||| |||||||| |||||||||||||||||    
T  36409473 gaccttgtaaattaaatcacatgtattctgaccat 36409439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 40469946 - 40470076
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtct-gaaaat 339  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||    
T  40469946 tcgaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctaaaaaat 40470045  T
Q  340 tgaccctgtaattaaataacatgtattctga 370  Q
    |||||||||||||||||||||||||||||||    
T  40470046 tgaccctgtaattaaataacatgtattctga 40470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 34135884 - 34136017
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  34135884 tcgaaataaaagatgtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 34135983  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||| |||||||    
T  34135984 gaccctgtaattaaataacatgtattttgaccat 34136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 27047020 - 27046841
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||| ||| |||||    
T  27047020 gcagtggcggagccaggaaatatatggagcccgggcaaaaaatttatcgcaaatttacatgtgacataatatataaacagtcataaatcg-aattttttt 27046922  T
Q  220 attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttatta 300  Q
     |||||| ||           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  27046921 ttttttttttcctaaaataaatcgaaataaaagaggtttatcattttgtcaacagaagtacaatttaaaatagggttatta 27046841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 243 - 376
Target Start/End: Complemental strand, 4405094 - 4404961
Alignment:
Q  243 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattga 342  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||| ||||| ||||| ||||||| |||||||||||||||||     
T  4405094 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattaaccatgtaatatatgtgaagtctgaaaattgg 4404995  T
Q  343 ccctgtaattaaataacatgtattctgaccatat 376  Q
    |||||||||||||||||||||||| |||||||||    
T  4404994 ccctgtaattaaataacatgtattttgaccatat 4404961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 23403275 - 23403023
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    ||||||||||||||||||||||||||||| ||||| |||  ||  ||  ||||||||||||||||| |||||| || ||||||||||| |  | ||||||    
T  23403275 cagtggcggagccaggaaatttatggagctcgggcgaaatttttttcccaaattcacatgtgacataatatatcaatagtcataaatcaattttttttta 23403176  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataat 320  Q
     |||| ||            || |||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| || |    
T  23403175 attttaata-attaaaaaaatcaaaataaaataggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtatt 23403077  T
Q  321 atacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||| |||||||||||||||||  |||||||||||||||||| |||| |||||||    
T  23403076 atatgtgaagtctgaaaattggtcctgtaattaaataacatttattttgaccat 23403023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 241 - 374
Target Start/End: Original strand, 16787104 - 16787237
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  16787104 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggcttattaattaaaattgaccatgtaatatatgtgaagtctaaaaatt 16787203  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
    |  ||||||||||||||||||||||| |||||||    
T  16787204 ggtcctgtaattaaataacatgtattttgaccat 16787237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 244 - 366
Target Start/End: Complemental strand, 3436319 - 3436196
Alignment:
Q  244 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaa-attga 342  Q
    |||||||| |||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3436319 aaataaaataggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatataagatacgtgaagtctgaaacattga 3436220  T
Q  343 ccctgtaattaaataacatgtatt 366  Q
    || |||| | ||||||||||||||    
T  3436219 ccatgtagtaaaataacatgtatt 3436196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 119 - 303
Target Start/End: Complemental strand, 29632593 - 29632413
Alignment:
Q  119 agcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatatttt 218  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||  || ||||    
T  29632593 agcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcg--atttttt 29632496  T
Q  219 tattttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaatt 303  Q
    | |||||||  |          || ||||||| || | |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29632495 ttttttttacct--aaaaaaaatcaaaataaatgaagcttatcattttatcaacaaaagtacaatttaaaatagggttattaatt 29632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 9878251 - 9878175
Alignment:
Q  298 ttaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9878251 ttaattgaaattgaccatgtaatatacatgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 9878175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 313
Target Start/End: Complemental strand, 42232108 - 42231922
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttta 220  Q
    |||||||||||||||  ||||||||||| | |||||||||||| |||||||||| | |||| | || ||||||||||| ||||||||| |||||||| |     
T  42232108 cagtggcggagccagataatttatggagtctgggcaaaaaatttatcgtaaatttatatgtaagataatatataaacaatcataaatccaaatatttatt 42232009  T
Q  221 ttttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
    ||   ||             || |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  42232008 ttcccta------aaaaaaatcaaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgacc 42231922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 40469866 - 40469953
Alignment:
Q  127 cggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||| |||||||||||| |||||||||| ||| |||||||||||||||| || || |||||||||||||||||||||||||||    
T  40469866 cggagccagaaaatttatggagtccgggcaaaatatttatcgtaaattcacatgcgatataatatataaacagtcataaatcgaaata 40469953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 36409704 - 36409616
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga 210  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||| |||||||||||||| |  |||||||||||||||||||||||    
T  36409704 gcagtggcggagctaggaaatttatagagcccgggcgaaaaatttatcgcaaattcacatgtgaaa--atatataaacagtcataaatcga 36409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 3436408 - 3436318
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaa 212  Q
    |||| |||||||| ||||||||||||| | |||||||  ||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  3436408 agtgccggagccaagaaatttatggagtcagggcaaatcatttatcgcaaattcacatgtgacataatatataaacagtcataaatcgaaa 3436318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 24592196 - 24592285
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcga 210  Q
    |||||||||||||||||| ||||| ||||| | ||||||  |||| |||||||||||||||||||| | ||||||  |||||||||||||    
T  24592196 cagtggcggagccaggaattttatagagcctgagcaaaattttaaccgtaaattcacatgtgacataacatataattagtcataaatcga 24592285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 42447196 - 42447147
Alignment:
Q  165 atcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  42447196 atcgcaaattcacatgtgacataatatataaacagtcataaatcgaaata 42447147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 21958830 - 21958735
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| ||||| ||||| ||||  ||||||||| || |||| ||||||| |||||||||   ||||||||| |||||||||||||||||    
T  21958830 cagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatatataaatagtcataaatcgaaata 21958735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 16787000 - 16787042
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  16787000 cagtggcggagccaggaaatttatggagcccgggcgaaaaatt 16787042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 13152253 - 13152346
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| ||||| ||||| ||| | ||||||||  || |||| ||||||||||| ||||| ||||||||| | |||||||| ||||||    
T  13152253 cagtggcggagctaggaattttatcgagtctgggcaaaattttgatcgcaaattcacatgcgacataatatataaataatcataaattgaaata 13152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 17839645 - 17839572
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||| |||| ||||||| |||| ||||||||||||||||| |||||||    
T  17839645 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 17839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 2727959 - 2728001
Alignment:
Q  271 acaaaagtgcaatttaaaatagggttattaattgaaattgacc 313  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  2727959 acaaaagtacaatttaaaatacggttattaattgaaattgacc 2728001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 34135783 - 34135825
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaatt 163  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  34135783 cagtggcggagccagaaaatttatggagcccgggcgaaaaatt 34135825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 42231930 - 42231892
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42231930 aaattgaccctgtaattaaataacatgtattttgaccat 42231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 5637567 - 5637640
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    |||||||||||||||||| |  || ||||  |||| ||||||| |||| ||||||||||||||||| |||||||    
T  5637567 cagtggcggagccaggaattacatagagcttgggcgaaaaatttatcgcaaattcacatgtgacataatatata 5637640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 28846873 - 28846828
Alignment:
Q  169 taaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||    
T  28846873 taaattcacatgtgatataatatataaatagtcataaatcgaaata 28846828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 54173 - 54129
Alignment:
Q  16 aaaaaatcatttaagacaaaaaattgttcaatatcataaaagttt 60  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||    
T  54173 aaaaaatcgtttaagacaaaaaattattcaataccataaaagttt 54129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 24333984 - 24333940
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    |||||||||||||| || ||||||||| |||||||||||||||||    
T  24333984 aaattcacatgtgatataatatataaatagtcataaatcgaaata 24333940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 366
Target Start/End: Original strand, 2727993 - 2728023
Alignment:
Q  336 aaattgaccctgtaattaaataacatgtatt 366  Q
    |||||||||||||||||||||||||||||||    
T  2727993 aaattgaccctgtaattaaataacatgtatt 2728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 16594862 - 16594824
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaa 159  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  16594862 cagtggcggagccaggaaatttatagagcctgggcaaaa 16594824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 21958742 - 21958692
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||| |||||    
T  21958742 tcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 21958692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 36406378 - 36406424
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcg 168  Q
    ||||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  36406378 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcg 36406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 10468018 - 10467974
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||| || || ||||||||| |||||||||||||||||    
T  10468018 aaattcacatgcgaaataatatataaatagtcataaatcgaaata 10467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 121 - 374
Target Start/End: Complemental strand, 18773 - 18515
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt- 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||     
T  18773 cagtggcggagccatgaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgatttttttttt 18674  T
Q  220 -attttt--tatttnnnnnnnnnn--tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacca 314  Q
     ||||||  |||||            || ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18673 aatttttattattttacctaaaaaaatcaaaataaaagaggtttatcattttatcaacaaaagtacaatttaatatagggttattaattgaaattgacca 18574  T
Q  315 tataatatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
      |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  18573 cgtaatatacgtgaagtctgaaaattga-cctgtaattaaataacatgtattccgaccat 18515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 479417 - 479668
Alignment:
Q  120 gcagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaatattttt 219  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||   | |||||    
T  479417 gcagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcg---ttttttt 479513  T
Q  220 attttttatttnnnnnnnnnntcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataa 319  Q
     |||||| |            || ||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||  |||    
T  479514 tttttttttacctaaaaaaaatcaaaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaa 479613  T
Q  320 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  479614 tatacgtgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 435257 - 435300
Alignment:
Q  170 aaattcacatgtgacatgatatataaacagtcataaatcgaaat 213  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||    
T  435257 aaattcacatgtgacataatatataaatagttataaatcgaaat 435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 32303 - 32170
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccatataatatacgtgaagtctgaaaatt 340  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  32303 tcgaaataaaaaaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagcctgaaaatt 32204  T
Q  341 gaccctgtaattaaataacatgtattctgaccat 374  Q
     ||||| |||||||||||||||||||||||||||    
T  32203 taccctataattaaataacatgtattctgaccat 32170  T

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Target: scaffold0154; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 32388 - 32296
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatataaacagtcataaatcgaaata 214  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||| |||||||| | |||||| ||||||||||| |||||||||||||||    
T  32388 cagtggcggagccaggaaatttatggagcccggg-taaaaatttatcgcaaattcacttatgacataatatataaacaatcataaatcgaaata 32296  T

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Target: scaffold0178 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 21945 - 22009
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat 186  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  21945 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaattcacatgtgacat 22009  T

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Target: scaffold0178; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 27447 - 27511
Alignment:
Q  122 agtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat 186  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  27447 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaattcacatgtgacat 27511  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 214018 - 214113
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacat--gatatataaacagtcataaatcgaaata 214  Q
    |||||||||||| ||||| ||||| ||||  ||||||||| || |||| ||||||| |||||||||   ||||||||| |||||||||||||||||    
T  214018 cagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatatataaatagtcataaatcgaaata 214113  T

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Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 214106 - 214156
Alignment:
Q  241 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaata 291  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||| |||||    
T  214106 tcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 214156  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 3723 - 3781
Alignment:
Q  17 aaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattct 75  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||| | ||||||    
T  3723 aaaaatcatataagataaaaaattattcaatatcataaaagtttgtcatgtactattct 3781  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 7546 - 7620
Alignment:
Q  6 ttttgttcataaaaaatcatttaagacaaaaaattgttcaatatcataaaagtttgtcatgcattattctgtctt 80  Q
    |||||| ||| |||||| || |||||| ||||||| |||||||  ||||||||||||| || |||||||| ||||    
T  7546 ttttgtccattaaaaattatataagaccaaaaattattcaatactataaaagtttgtcttgtattattctatctt 7620  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 134712 - 134784
Alignment:
Q  121 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacatgatatata 194  Q
    ||||||||||||||| |||||||  ||| | || | ||||||| |||| ||||||||||||||||| |||||||    
T  134712 cagtggcggagccagaaaatttacagagtctgg-cgaaaaatttatcgcaaattcacatgtgacataatatata 134784  T

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Target: scaffold0495 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 9064 - 9004
Alignment:
Q  290 tagggttattaattgaaattgaccatataatatacgtgaagtctgaaaattgaccctgtaa 350  Q
    |||||||| | ||||||||||||||| | ||||| | |||||||||||| ||||| |||||    
T  9064 tagggttaattattgaaattgaccatgttatatatgcgaagtctgaaaaatgaccttgtaa 9004  T

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