View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19042_high_10 (Length: 264)
Name: NF19042_high_10
Description: NF19042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19042_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 6144833 - 6145086
Alignment:
| Q |
1 |
cagctgcggacctataaggctcttcaaacgcggtcgaaacccaagacaaatcagatccttccttcttaccagcggtaggtgacaattcactaggcctaat |
100 |
Q |
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| T |
6144833 |
cagctgcggacctataaggctcttcaaacgcggtcgaaacccaagacaaatcagatccttccttcttaccagcggtaggtgacaattcactaggcctaat |
6144932 |
T |
|
| Q |
101 |
ggcaacaagagtagctcctttcaaaacaaccccatcaggcaactccaaatgaggtgcataccagagcctcatattaagagcaggaacaagtgtcctcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6144933 |
ggcaacaagagtagctcctttcaaaacaaccccatcaggcaactccaaatgaggcgcataccagagcctcatattaagagcaggaacaagtgtcctcttc |
6145032 |
T |
|
| Q |
201 |
gaagccgaggaagccgaaagcggtttcaccctcaactcctcaagctgatctctg |
254 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
6145033 |
gaagccgaggaagccgaaagcggcttcaccctcaactcctcaagctgatctctg |
6145086 |
T |
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