View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19042_high_8 (Length: 341)
Name: NF19042_high_8
Description: NF19042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19042_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 2 - 336
Target Start/End: Complemental strand, 6523412 - 6523076
Alignment:
| Q |
2 |
tggttgtacagaagatattattaattaggnnnnnnnnatattaatttctctctacgagtttagggaattttcgttattgagttagcgttcgaggtccagt |
101 |
Q |
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| T |
6523412 |
tggttgtacagaagatattattaattaggttttttttatattaatttctctctacgagtttagggaattttcattattgagttagcgttcgaggtccagt |
6523313 |
T |
|
| Q |
102 |
tagacccgttcaacccaatgatatgtgccaaacaaactcatattttacttgaactcg--tcaaatctgagtccatatggaatcaacctgtttaaattctg |
199 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
6523312 |
tagacccgttcaacccgatgatatgtgccaaacaaactcatattttacttgaactcagttcaaatctgagtccatatggaatcaacctgtttaaattctg |
6523213 |
T |
|
| Q |
200 |
ggggtgtttgactttgatagcttgttaaatttgctttattatagctaagttatcatctataccacaatttaaattgaaagaatcacattggtataaattt |
299 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
6523212 |
ggggtgtttgattttgatagcttgttaaatttgctttattatagctaagttatcatctataccacaatttaaattgaaagaaccacattggtataaattt |
6523113 |
T |
|
| Q |
300 |
gcaaagtaagaagtcattttaggtatgtaagacttat |
336 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
6523112 |
gcaaagtaagaagtcattttaggtatgtaagacttat |
6523076 |
T |
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