View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19042_low_7 (Length: 367)
Name: NF19042_low_7
Description: NF19042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19042_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 38710045 - 38709697
Alignment:
| Q |
11 |
cagagactgacaaggccggacactcataagctacaaacaaaggcagctcagaagccagcacctgagatagctcaaggtatggtttctgactctgtccctg |
110 |
Q |
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| T |
38710045 |
cagaggctgacaaggccggacactcataagctacaaacaaaggcagctcagaagctaacacctgagatagctcaaggtatggtttctgactctgtccctg |
38709946 |
T |
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| Q |
111 |
tccct------cacctacttctgaacaaactaacccttcactaaaacatctaacatctgatgtggtaatcccactaacagttgttcaacaccatgaaacc |
204 |
Q |
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| T |
38709945 |
tccctgtccctcacctacttctgaacaaaccaacccttcactaaaacatctaacatctgatgtggtaatcccactaacagttgttcaacaccatgaaacc |
38709846 |
T |
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| Q |
205 |
atacaagtgtgtagtaattcaccagaggactcttgtagaatggtttattaaagtccttaagaaaatggatttagttgatctcataaagaattttgccagg |
304 |
Q |
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| T |
38709845 |
atagaagtgtgtagtaattcaccagaggactcttgtagaatggtttattaaagtccttaagaaaatggatttagttgatctcataaagaattttgccagg |
38709746 |
T |
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| Q |
305 |
aaaatagaggttcccagaccacctaccattgcagatactacattcaatc |
353 |
Q |
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| T |
38709745 |
aaaatagaggttcccagaccacctaccattgcagataccacattcaatc |
38709697 |
T |
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