View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19043_low_8 (Length: 357)
Name: NF19043_low_8
Description: NF19043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19043_low_8 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-173; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 13 - 339
Target Start/End: Complemental strand, 9336219 - 9335893
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9336219 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
9336120 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
9336119 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgcttgatgtccactt |
9336020 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9336019 |
tattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcaaa |
9335920 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggataga |
339 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
9335919 |
tagatcacccttaattgtgaggataga |
9335893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 30775099 - 30775166
Alignment:
| Q |
20 |
atacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtc |
87 |
Q |
| |
|
||||||||||| |||| |||||| || | ||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
30775099 |
atacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaagtc |
30775166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 300
Target Start/End: Original strand, 35132299 - 35132575
Alignment:
| Q |
15 |
tattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctc |
114 |
Q |
| |
|
|||||||||||||||| |||| ||| || | ||||||||| ||||| ||| |||||||||||||||| || || || |||||||| |||||| || |
|
|
| T |
35132299 |
tattcatacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttc |
35132398 |
T |
|
| Q |
115 |
aacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttta |
214 |
Q |
| |
|
|| | ||| ||||| | ||||| ||| || |||||||||| |||||||||||||| || ||||| |||| ||| ||||| ||||| |
|
|
| T |
35132399 |
aatattggcaacaacaaggaaagaaagtgatctctttgccctctagcaggcagttctcaa---------ggcttttgaattcccactaatgtctactttg |
35132489 |
T |
|
| Q |
215 |
ttcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
||||| | || ||||||| ||||| ||||| ||||||||||||||||||||||| || || || || |||||||| || ||||| |
|
|
| T |
35132490 |
ttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtggc |
35132575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 8667260 - 8667585
Alignment:
| Q |
14 |
atattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacct |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
8667260 |
atattcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacct |
8667359 |
T |
|
| Q |
114 |
caacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttt |
213 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8667360 |
caacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccacttt |
8667459 |
T |
|
| Q |
214 |
attcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaat |
313 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||| || |
|
|
| T |
8667460 |
attcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagtggctttcacttcaaag |
8667559 |
T |
|
| Q |
314 |
agatcacccttaattgtgaggataga |
339 |
Q |
| |
|
| |||||||||||||||||||||||| |
|
|
| T |
8667560 |
acatcacccttaattgtgaggataga |
8667585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 13 - 339
Target Start/End: Complemental strand, 10494702 - 10494376
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10494702 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
10494603 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
10494602 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
10494503 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||| || |||||||| ||||| ||||| |||||||||||||| || |
|
|
| T |
10494502 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagtggcttttacttcaaa |
10494403 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggataga |
339 |
Q |
| |
|
| |||||||||||||||||||||||| |
|
|
| T |
10494402 |
gacatcacccttaattgtgaggataga |
10494376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 339
Target Start/End: Complemental strand, 13333784 - 13333458
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333784 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctact |
13333685 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||||||||| ||||||| ||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| || || | |
|
|
| T |
13333684 |
tcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgt |
13333585 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || |||||||| |||||||||||||||||||||||||| || |
|
|
| T |
13333584 |
tattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggtggcttttacttcaaa |
13333485 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggataga |
339 |
Q |
| |
|
| ||||||| ||||||| |||||||| |
|
|
| T |
13333484 |
gacatcacccataattgtaaggataga |
13333458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 339
Target Start/End: Original strand, 8654290 - 8654616
Alignment:
| Q |
13 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654290 |
aatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
8654389 |
T |
|
| Q |
113 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactt |
212 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||| |
|
|
| T |
8654390 |
tcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactt |
8654489 |
T |
|
| Q |
213 |
tattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||||||||||||| ||||| || ||||| |||| |||||||||||||||||||| || || || |||||||||||||| || ||||||||||| || || |
|
|
| T |
8654490 |
tattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagtggcttttacgtcaaa |
8654589 |
T |
|
| Q |
313 |
tagatcacccttaattgtgaggataga |
339 |
Q |
| |
|
| |||||||||||||||||| ||||| |
|
|
| T |
8654590 |
gacatcacccttaattgtgagtataga |
8654616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 17 - 339
Target Start/End: Original strand, 8659207 - 8659529
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||||||||| |||| ||||| || | ||||||||| |||||||||||||| ||||| | ||||| |||||| |||||||| ||| ||||||| |
|
|
| T |
8659207 |
ttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctgaaataaagaatcgacctcaa |
8659306 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |
|
|
| T |
8659307 |
cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttaccactaatgtccactttatt |
8659406 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
||||||||| ||||| || ||||| ||||| ||||||||| ||||||||||||| ||||||||||| |||||||| | |||||||||||||| || | | |
|
|
| T |
8659407 |
cttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtgagtgtttccagaagtggcttttacttcaaagaca |
8659506 |
T |
|
| Q |
317 |
tcacccttaattgtgaggataga |
339 |
Q |
| |
|
|||||||| ||||| |||||||| |
|
|
| T |
8659507 |
tcacccttcattgtaaggataga |
8659529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 21 - 339
Target Start/End: Original strand, 1301308 - 1301626
Alignment:
| Q |
21 |
tacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagt |
120 |
Q |
| |
|
|||||||||| |||| ||||| |||| ||||||||| ||||||||||||||| ||||| | |||||||||||| |||||||| ||| |||||||| || |
|
|
| T |
1301308 |
tacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaagaatcgacctcaacggt |
1301407 |
T |
|
| Q |
121 |
ggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttc |
220 |
Q |
| |
|
||| || ||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||| |||| | ||| |||||||||||||||||| |
|
|
| T |
1301408 |
ggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttaccactaatgtccactttattcttc |
1301507 |
T |
|
| Q |
221 |
ttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcac |
320 |
Q |
| |
|
||| | ||||| || ||||| ||| | |||||||| |||||||||||||| ||||||||||| || ||||| | |||||||||||||| || | ||| | |
|
|
| T |
1301508 |
tttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagtggcttttacttcaaagacatcgc |
1301607 |
T |
|
| Q |
321 |
ccttaattgtgaggataga |
339 |
Q |
| |
|
|||| || || |||||||| |
|
|
| T |
1301608 |
ccttgatggtaaggataga |
1301626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 312
Target Start/End: Original strand, 17260091 - 17260380
Alignment:
| Q |
23 |
cactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtgg |
122 |
Q |
| |
|
||||||| |||| |||||| || | ||| ||||| ||||||||||||||||| |||||||| | | ||| |||||||||| |||||||||||| ||| |
|
|
| T |
17260091 |
cactcataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattgg |
17260190 |
T |
|
| Q |
123 |
taacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttctt |
222 |
Q |
| |
|
| ||| | |||||||| ||| |||||||||| | ||||| |||||||||||||||||||||| ||||||||||| | | ||||||| ||| ||| | | |
|
|
| T |
17260191 |
tcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcccaataatgtccaattttttcgttct |
17260290 |
T |
|
| Q |
223 |
ttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||| | ||| || |||||||||| |||||||| |||||||||||||| || ||||| || |||| ||| ||||||| || |||||||| |
|
|
| T |
17260291 |
tttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaa |
17260380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 312
Target Start/End: Original strand, 17267789 - 17268078
Alignment:
| Q |
23 |
cactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtgg |
122 |
Q |
| |
|
||||||| |||| |||||| || | ||||||||| ||||||||||||||||| |||||||| || | ||| |||||||||| |||||||||||| ||| |
|
|
| T |
17267789 |
cactcatcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattgg |
17267888 |
T |
|
| Q |
123 |
taacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttctt |
222 |
Q |
| |
|
| ||| | || ||||| ||| |||||||||| | ||||| ||||||||||||||||| | || ||||||||||| | || | || ||| || ||| | |
|
|
| T |
17267889 |
tcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcccaacaattttcaatttttttttcct |
17267988 |
T |
|
| Q |
223 |
ttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
||| | || ||||||||||||| |||||||| |||||||||||||| || ||||| || |||| ||| ||||||| || |||||||| |
|
|
| T |
17267989 |
tttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaa |
17268078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 27831197 - 27830925
Alignment:
| Q |
19 |
catacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaaca |
118 |
Q |
| |
|
|||||| |||||||||| |||||| || | ||||||||| || ||||||||||| |||| | ||||| || ||| |||||| ||||||| ||||| | |
|
|
| T |
27831197 |
catacattcattgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaata |
27831098 |
T |
|
| Q |
119 |
gtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattct |
218 |
Q |
| |
|
|| || ||| || |||||| ||| ||||||||||| ||||||| ||||||| |||||| |||| | ||||||||| ||| ||||||||| | |||| |
|
|
| T |
27831097 |
gtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttct |
27830998 |
T |
|
| Q |
219 |
tcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcc |
291 |
Q |
| |
|
|||| || ||| | || ||||||||||| ||||| || |||||||||||||| || |||||||| |||||||| |
|
|
| T |
27830997 |
tcttcttgaacacctccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttcc |
27830925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 300
Target Start/End: Original strand, 3147113 - 3147391
Alignment:
| Q |
22 |
acactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtg |
121 |
Q |
| |
|
||||||| |||||| ||||| || | ||||||||| ||||||||||||||||||||| | ||||| | |||| |||||||| ||||| ||||| ||| |
|
|
| T |
3147113 |
acactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaatggtg |
3147212 |
T |
|
| Q |
122 |
gtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttct |
221 |
Q |
| |
|
|| | | ||||||||| ||||| | |||||| || ||||| || ||| ||||||||||||||| | ||| |||| ||| ||||| || || ||||||| |
|
|
| T |
3147213 |
gtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttgagttctcactaatgtctaccttgttcttct |
3147312 |
T |
|
| Q |
222 |
tttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
| || ||||| |||| ||||| ||||| || |||||||||||||| || |||||||| |||||||||||| |||| |
|
|
| T |
3147313 |
tcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcctgcgatggc |
3147391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 303
Target Start/End: Original strand, 8646757 - 8647007
Alignment:
| Q |
53 |
tcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttg |
152 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| || || ||||||||| ||||| |||| ||||| | |||||||||| ||| ||||||||| |
|
|
| T |
8646757 |
tcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttg |
8646856 |
T |
|
| Q |
153 |
ccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaaccat |
252 |
Q |
| |
|
| ||||| || || ||||||||||||||||||| | ||| ||| | | | |||||||| || |||||||| || || |||| |||| | || ||||| |
|
|
| T |
8646857 |
ctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccat |
8646956 |
T |
|
| Q |
253 |
tctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttt |
303 |
Q |
| |
|
||| ||||||||||||| ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
8646957 |
tctactatcaaagtcctctcctccgaggtgagtgtttccagcggtggcttt |
8647007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 6789356 - 6789639
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||||||||| |||| ||||| || | ||||||||| ||||| ||||| | ||||||| |||||||| ||| |||||||| |||||||||| |
|
|
| T |
6789356 |
ttcatacactcattaaaaatatccatattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaa |
6789455 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||| || || | | ||||||| |||| |||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| | | | || |||||||| || |
|
|
| T |
6789456 |
tagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgtt |
6789555 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
|||| | || ||||| || |||| ||||| |||| || ||||||||||||||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
6789556 |
cttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtgagtgtttccaccggtggc |
6789639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 8545604 - 8545727
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||| || ||| | || |||||| | || ||||| | ||||| || |
|
|
| T |
8545604 |
tcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaaagta |
8545703 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtc |
267 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
8545704 |
attcaccattctgttatcaaagtc |
8545727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 335
Target Start/End: Complemental strand, 8586032 - 8585712
Alignment:
| Q |
15 |
tattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctc |
114 |
Q |
| |
|
|||| ||||||||||| |||| |||||| || | ||||||||| ||| |||| |||||||||||||| || |||| ||| | ||||| ||| | || |
|
|
| T |
8586032 |
tatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaagagaaatcgacgccctcacataaataatcaatttc |
8585933 |
T |
|
| Q |
115 |
aacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccacttta |
214 |
Q |
| |
|
|| ||| || || || ||||| ||| ||||||||||| | ||||| || ||||| |||| ||| || | | |||||||| | | || ||||| || |
|
|
| T |
8585932 |
aatagtagtgaccaatttgaaagaaagtgtcctttttgccttttcacatgccgttcttaaccgcctcaaagctcttgggttcttagtaatatccacattg |
8585833 |
T |
|
| Q |
215 |
ttcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaata |
314 |
Q |
| |
|
||||| | || || || |||||||| ||||| | ||||||||||||||||||| | || |||||||| || ||||| ||||| ||||| ||||| || | |
|
|
| T |
8585832 |
ttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaaga |
8585733 |
T |
|
| Q |
315 |
gatcacccttaattgtgagga |
335 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
8585732 |
catcacctttaattgtgagga |
8585712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 8628609 - 8628694
Alignment:
| Q |
250 |
cattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgagga |
335 |
Q |
| |
|
||||||||||||||||||||| || |||||||| || ||||| || |||||||| ||||| || | |||||| ||||||||||||| |
|
|
| T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgagga |
8628694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 8636436 - 8636345
Alignment:
| Q |
248 |
accattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgaggataga |
339 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| ||| || |||||||| ||||| || | ||||| |||||| |||| ||||| |
|
|
| T |
8636436 |
accattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggctttaacttcaaagacttcacctttaattttgagtataga |
8636345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 7877942 - 7877804
Alignment:
| Q |
132 |
caaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactc |
231 |
Q |
| |
|
|||| |||||| ||||||| ||||||||||| ||||||||||||||||| | || | ||||| | || |||||||||||||||||| | || ||||| |
|
|
| T |
7877942 |
caaatgacagtgtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactc |
7877843 |
T |
|
| Q |
232 |
ttcaacaaaatagttaaccattctgttatcaaagtcctc |
270 |
Q |
| |
|
|| |||| ||| | ||||||||||||||||||||| |
|
|
| T |
7877842 |
catcactaaatggttcaacattctgttatcaaagtcctc |
7877804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 29582038 - 29581900
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
|||| |||||||||||||| || ||||||| | ||||||| | ||||||||||| ||| ||||||| || |||||| | || ||||| | |||| || |
|
|
| T |
29582038 |
tcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaaagta |
29581939 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtg |
282 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
29581938 |
attcaccattcggttatcaaagtcctctcctcctaggtg |
29581900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 309
Target Start/End: Original strand, 8570282 - 8570447
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaac-tcttcaacaaaat |
242 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||| |||| ||||||||||| ||| || ||| | || |||||||| || ||| ||||| ||||| | |
|
|
| T |
8570282 |
tcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttc-acaaagt |
8570380 |
T |
|
| Q |
243 |
-agttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttc |
309 |
Q |
| |
|
||| || ||||||||||||||| || || ||||| ||||| |||| ||| || ||||| || ||||| |
|
|
| T |
8570381 |
gagtcaa-cattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttc |
8570447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 8590602 - 8590771
Alignment:
| Q |
137 |
gacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaa |
236 |
Q |
| |
|
|||||| ||||||| ||||||||||| || ||| |||||||||| | | ||| ||||| ||| | ||||||||||||||| | | ||||| | | |
|
|
| T |
8590602 |
gacagtgtccttttagccctctcacaagctgttttcaacctcctaagagcccttgcgttcccacttaaatccactttattcttcctcctaaactccttca |
8590701 |
T |
|
| Q |
237 |
caaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttac |
306 |
Q |
| |
|
| |||| || |||||||||||||||||||||||| ||||| ||||| || | ||| | ||||||||||| |
|
|
| T |
8590702 |
ccaaatggtgaaccattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttac |
8590771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 282
Target Start/End: Complemental strand, 29577864 - 29577731
Alignment:
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||||||| ||| |||||||| || |||||| | || ||||| | ||||| | | | | |
|
|
| T |
29577864 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggctca |
29577765 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtg |
282 |
Q |
| |
|
||||| | ||||| |||||||| ||||| ||||| |
|
|
| T |
29577764 |
ccattttattatcgaagtcctctcctcctaggtg |
29577731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 8576297 - 8576465
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||||| ||||| ||| ||| || ||| |||| | ||| || | ||||| | |||||| | |
|
|
| T |
8576297 |
tcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaaagtg |
8576396 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
| |||||| ||||||||||||| | |||||| ||||| |||| ||| || ||||| || |||||||| |
|
|
| T |
8576397 |
atccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaa |
8576465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 8609781 - 8609828
Alignment:
| Q |
37 |
gtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaa |
84 |
Q |
| |
|
|||||||||||||| |||||| || |||||||||||||||||| |||| |
|
|
| T |
8609781 |
gtccatgttaagttgctcaaacttcgcacgagtgattgatgaacaaaa |
8609828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 8602036 - 8602134
Alignment:
| Q |
235 |
aacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgag |
333 |
Q |
| |
|
|||||| | ||| ||||||| ||||||||||||||| ||||||||||| |||| ||| | ||||| || ||||| || |||| | |||||||||||| |
|
|
| T |
8602036 |
aacaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgag |
8602134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 8559408 - 8559493
Alignment:
| Q |
248 |
accattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgag |
333 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||| ||| | ||||| || ||||| || |||| | |||||||||||| |
|
|
| T |
8559408 |
accattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgag |
8559493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 8609989 - 8610026
Alignment:
| Q |
245 |
ttaaccattctgttatcaaagtcctcgcctccaaggtg |
282 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
8609989 |
ttaaccattctgtgatcaaagtcctctcctccaaggtg |
8610026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 8102532 - 8102568
Alignment:
| Q |
38 |
tccatgttaagttcctcaaatttggcacgagtgattg |
74 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
8102532 |
tccatgttaagttcctcaaatctggcacgggtgattg |
8102568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 39985700 - 39985776
Alignment:
| Q |
227 |
aactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttt |
303 |
Q |
| |
|
||||||| |||||| | ||| ||||||||||| ||||| ||||| |||||||| || |||| ||| || |||||||| |
|
|
| T |
39985700 |
aactcttgaacaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggcttt |
39985776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 17 - 339
Target Start/End: Complemental strand, 16657841 - 16657519
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||| |||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
16657841 |
ttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaa |
16657742 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||| |||| | ||| ||||| ||| |||||||| ||||| |
|
|
| T |
16657741 |
cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttatt |
16657642 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaataga |
316 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| ||| ||||||||||||||||||| || |||||||| |||||||| || ||||||||||| || || | | |
|
|
| T |
16657641 |
cttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaaca |
16657542 |
T |
|
| Q |
317 |
tcacccttaattgtgaggataga |
339 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
16657541 |
tcacccttaattgtaaggataga |
16657519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 288
Target Start/End: Original strand, 7542103 - 7542341
Alignment:
| Q |
50 |
tcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatccttt |
149 |
Q |
| |
|
|||||||| ||||| | | |||| |||||||||||||| || || |||||||| ||||||||||| ||||| ||||| | ||||| ||| |||| |
|
|
| T |
7542103 |
tcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatcttt |
7542202 |
T |
|
| Q |
150 |
ttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaac |
249 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||| |||||| |||| ||| ||||||||||| ||||| | || ||||||| ||||| ||||| | |
|
|
| T |
7542203 |
ttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgc |
7542302 |
T |
|
| Q |
250 |
cattctgttatcaaagtcctcgcctccaaggtgcgtgtt |
288 |
Q |
| |
|
|||||| ||||||||||| || || |||||||| ||||| |
|
|
| T |
7542303 |
cattctattatcaaagtcttctccaccaaggtgagtgtt |
7542341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 43625256 - 43625542
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| |||||| ||||||| ||||| || | ||| ||||||||||||||||||||||||||| | ||||| || || ||||||| ||||||||||| |
|
|
| T |
43625256 |
ttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacggaataaagaatctacctcaa |
43625355 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|||| | | |||||||||||||| |||||||| | ||||| || || ||||||||||| |||| || | ||| ||| | | | || ||||| || || |
|
|
| T |
43625356 |
tagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttccaataatatccacattgtt |
43625455 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttt |
303 |
Q |
| |
|
|||||| | || ||||| |||| ||||| |||||||| | |||||||||||| ||||||||||| |||||||| || |||||||| |
|
|
| T |
43625456 |
cttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggcttt |
43625542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 49 - 308
Target Start/End: Original strand, 12234565 - 12234824
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| ||||| | | |||| ||||||||||| || || || |||||||| ||||||||||| || | ||||| | ||||||| | ||| |
|
|
| T |
12234565 |
ttcctcaaacttggccctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaatggttgcaacaacaaggaaagacaatgatctt |
12234664 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||| |||||| || | ||| ||||||||||| ||||| | || ||||||| | ||| ||||| | |
|
|
| T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta |
12234764 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttactt |
308 |
Q |
| |
|
|||||||||||||||||||||| || || ||||| |||||||| || |||||||| |||| |
|
|
| T |
12234765 |
ccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaactt |
12234824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 14703252 - 14703526
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| ||||||||| ||||||||||| || | ||| ||||| ||||| | | |||| |||||||||||||| || | |||||||||||||||||||| |
|
|
| T |
14703252 |
ttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaa |
14703351 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
||||| |||| ||||| ||| | |||||||||||||| || || |||||||| |||||||||| |||||| || | ||| ||||||| | | || |
|
|
| T |
14703352 |
tagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttccactaatgtccaatctgtt |
14703451 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcc |
291 |
Q |
| |
|
|| | || ||||||| |||||| ||||| |||||||||||||| |||||||| || || ||||| |||||||| |
|
|
| T |
14703452 |
ttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagtgtttcc |
14703526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 335
Target Start/End: Complemental strand, 16662199 - 16661998
Alignment:
| Q |
134 |
aaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactctt |
233 |
Q |
| |
|
||||| ||| ||||||| ||| | ||||| | ||||||||||||||| |||| | |||| |||| | |||| |||||||| |||||| | || || |||| |
|
|
| T |
16662199 |
aaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctt |
16662100 |
T |
|
| Q |
234 |
caacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatcacccttaattgtgag |
333 |
Q |
| |
|
||||| ||||| | ||||||||||||||||||||| || || ||||| |||||||| | |||||||| ||||| || | |||||| ||||||||||| |
|
|
| T |
16662099 |
tcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
16662000 |
T |
|
| Q |
334 |
ga |
335 |
Q |
| |
|
|| |
|
|
| T |
16661999 |
ga |
16661998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 300
Target Start/End: Complemental strand, 12245698 - 12245447
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| || || ||| |||| ||||||||||| || || || |||||||| ||||||||||| ||| | ||||| | ||| || ||||| ||| |
|
|
| T |
12245698 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaacgaaagtattctt |
12245599 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||| ||||| | ||| || |||| ||| ||||| | || ||||| | |||| ||||| | |
|
|
| T |
12245598 |
tttgccctctcacaagcagttctcaatctcctcaaggcttttgaacttgcactaatatccaatttgttctttctcttgaactcctgtgcaaagtagttta |
12245499 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||| |||||||| || ||||| |
|
|
| T |
12245498 |
ccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggc |
12245447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 11999283 - 11999425
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| || || ||| |||| ||||||||||| || || || |||||||| ||||||||||| ||| | ||||| | ||| || ||||| ||| |
|
|
| T |
11999283 |
ttcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagttgcaacaacaagaaatgatagtattctt |
11999382 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttg |
191 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
11999383 |
tttgccctctcacaagcagttctcaacctcctcaaggcttttg |
11999425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 291
Target Start/End: Complemental strand, 12258873 - 12258631
Alignment:
| Q |
49 |
ttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctt |
148 |
Q |
| |
|
||||||||| ||||||||| ||||||||| |||||| || || || | |||||| ||||| ||||| ||| | ||||| | | |||| ||| ||| |
|
|
| T |
12258873 |
ttcctcaaacttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaatagttgcaacaacaagataagaaagtgatctt |
12258774 |
T |
|
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaa |
248 |
Q |
| |
|
||||| |||||||| || ||| |||| ||||| || | | |||| || | ||| || || ||||| ||||| | || |||||||| ||||| || | | |
|
|
| T |
12258773 |
tttgcactctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaactcttctacaaagtaactca |
12258674 |
T |
|
| Q |
249 |
ccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcc |
291 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
12258673 |
ccattctattatcaaagtcctctcctccaaggtgcgtgtttcc |
12258631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 17704169 - 17704117
Alignment:
| Q |
227 |
aactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaag |
279 |
Q |
| |
|
||||||| |||||| ||||| ||||||||||||| ||| ||||| |||||||| |
|
|
| T |
17704169 |
aactcttgaacaaagtagttcaccattctgttattaaaatcctcacctccaag |
17704117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 4678879 - 4678560
Alignment:
| Q |
19 |
catacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaaca |
118 |
Q |
| |
|
||||||||| ||||||| |||||| |||| ||||||||| ||||||||||| || |||||||||||||| |||||| |||||||| |||||| |||||| |
|
|
| T |
4678879 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctac-tcaaca |
4678781 |
T |
|
| Q |
119 |
gtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattct |
218 |
Q |
| |
|
||||| ||||| || ||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||||| ||||||| |
|
|
| T |
4678780 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttcttactaatgtccacattattct |
4678681 |
T |
|
| Q |
219 |
tcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaatagatc |
318 |
Q |
| |
|
||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| || || ||||| |||||||| || |||||||||||||| || | | | |
|
|
| T |
4678680 |
tctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagtggcttttacttcaaagacacc |
4678581 |
T |
|
| Q |
319 |
acccttaattgtgaggataga |
339 |
Q |
| |
|
|||||| ||| | |||||||| |
|
|
| T |
4678580 |
acccttgattttaaggataga |
4678560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 15594878 - 15595152
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||||||| || || |||||||||||||| | ||| ||||| |||| |||||| | |||||| | ||||| || || |||||||| ||||||||||| |
|
|
| T |
15594878 |
ttcatacaatccttaaaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaa |
15594977 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|| || ||| || |||||| |||| |||||||||||| || || ||||||||||| ||||| |||| ||||||||| | | || |||||||| || |
|
|
| T |
15594978 |
tggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgtt |
15595077 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcc |
291 |
Q |
| |
|
|||| | || || || | |||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
15595078 |
cttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttcc |
15595152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 28219762 - 28220045
Alignment:
| Q |
17 |
ttcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaa |
116 |
Q |
| |
|
|||| |||||||||||||| ||||| || | ||||||||| || |||||||| ||||||||| | || || || || |||||||| ||||||||||| |
|
|
| T |
28219762 |
ttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaa |
28219861 |
T |
|
| Q |
117 |
cagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttatt |
216 |
Q |
| |
|
|||| |||| ||||||||| ||| |||||||||| |||| || || ||||||||||||||||||| | ||| ||| | | | |||||||| || || |
|
|
| T |
28219862 |
tggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgtt |
28219961 |
T |
|
| Q |
217 |
cttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggc |
300 |
Q |
| |
|
|||||| || ||||| || | || ||||| ||||| || ||||||||||||| || || ||||| |||||||| |||||||| |
|
|
| T |
28219962 |
cttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccagcggtggc |
28220045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 314
Target Start/End: Original strand, 43744740 - 43744957
Alignment:
| Q |
97 |
aaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttc |
196 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||| ||||||||| | | |||||||||| || || || || ||||||||||||||||| | | ||||||| |
|
|
| T |
43744740 |
aaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggttt |
43744839 |
T |
|
| Q |
197 |
cgactgatgtccactttattcttcttttttaactcttcaacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcgg |
296 |
Q |
| |
|
| | | |||||||| || |||||||| || ||||| || | || ||||| ||||| || |||||||| ||||| ||||| ||||| |||||||| | || |
|
|
| T |
43744840 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtttccagagg |
43744939 |
T |
|
| Q |
297 |
tggcttttacttcgaata |
314 |
Q |
| |
|
|||| || |||| ||||| |
|
|
| T |
43744940 |
tggccttcacttggaata |
43744957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 12528475 - 12528643
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttccgactgatgtccactttattcttcttttttaactcttcaacaaaata |
243 |
Q |
| |
|
||||||| ||| |||| ||| ||||||||| ||||||| || ||||| ||||| | | ||||| ||||| |||||| | || ||||||| ||||| | |
|
|
| T |
12528475 |
tccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaaagtg |
12528574 |
T |
|
| Q |
244 |
gttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcgaa |
312 |
Q |
| |
|
|| ||||||| |||||||||||||| ||||||||||| |||| ||| || ||||| || |||||||| |
|
|
| T |
12528575 |
attcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaa |
12528643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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