View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19044_low_9 (Length: 250)
Name: NF19044_low_9
Description: NF19044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19044_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 44910599 - 44910367
Alignment:
| Q |
8 |
ttaggaagagaaaaattgtcaataaataaagtggcgccaatgaccattttacaaaagtcctcgtggtgttttgaactctcaaagttgcacagtcaaagtc |
107 |
Q |
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| T |
44910599 |
ttaggaagagaaaaattgtcaataaataaagtggcgccaatgaccattttacaaaagtcctcgtggtgttttgaactctcaaagttgcacagtcaaagtc |
44910500 |
T |
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| Q |
108 |
ttaccaccgagctcacacctcgtggataatattcttagttggtgaaagaagtttattgacaagaatttcagtttagttgcataattcatgcaaatacttt |
207 |
Q |
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| T |
44910499 |
ttaccaccgagctcacacctcgtggataatattcttagttggtgaaagaagtttaatgacaagaatttcagtttagttgcatcattcatgcaaatacttt |
44910400 |
T |
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| Q |
208 |
tcgtatactagttcacattccctgtcccctatg |
240 |
Q |
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| T |
44910399 |
tcgtatactagttcacattccctgtcccctatg |
44910367 |
T |
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