View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19045_low_30 (Length: 297)

Name: NF19045_low_30
Description: NF19045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19045_low_30
NF19045_low_30
[»] chr1 (57 HSPs)
chr1 (19-213)||(4428704-4428898)
chr1 (215-297)||(10577676-10577758)
chr1 (215-285)||(25934675-25934745)
chr1 (215-286)||(32461394-32461465)
chr1 (215-297)||(37598867-37598949)
chr1 (215-286)||(41597411-41597482)
chr1 (214-292)||(12918986-12919064)
chr1 (209-285)||(47989556-47989632)
chr1 (210-297)||(46348319-46348406)
chr1 (215-297)||(18337365-18337447)
chr1 (219-297)||(5898211-5898289)
chr1 (215-297)||(22515828-22515910)
chr1 (216-294)||(29163323-29163401)
chr1 (215-297)||(30749876-30749958)
chr1 (215-297)||(30771327-30771409)
chr1 (215-285)||(40917808-40917878)
chr1 (215-297)||(51410061-51410143)
chr1 (216-297)||(42359391-42359472)
chr1 (216-279)||(1486646-1486709)
chr1 (215-285)||(9828103-9828173)
chr1 (215-297)||(40258874-40258956)
chr1 (228-297)||(40181907-40181976)
chr1 (215-279)||(31015091-31015155)
chr1 (215-297)||(52903285-52903364)
chr1 (215-297)||(36878497-36878584)
chr1 (218-297)||(39130711-39130790)
chr1 (215-297)||(1815293-1815375)
chr1 (215-277)||(6427531-6427593)
chr1 (216-280)||(16297223-16297287)
chr1 (78-145)||(4440004-4440071)
chr1 (215-278)||(6414932-6414995)
chr1 (215-297)||(27965941-27966021)
chr1 (215-286)||(36906055-36906125)
chr1 (219-285)||(9629834-9629900)
chr1 (215-281)||(18556386-18556452)
chr1 (215-285)||(21032265-21032335)
chr1 (215-297)||(34712324-34712406)
chr1 (212-250)||(48415664-48415702)
chr1 (215-296)||(38078602-38078683)
chr1 (215-263)||(15765828-15765876)
chr1 (226-285)||(6612112-6612171)
chr1 (215-297)||(9690214-9690297)
chr1 (215-285)||(34741894-34741964)
chr1 (215-265)||(1704936-1704986)
chr1 (215-285)||(5944342-5944412)
chr1 (215-257)||(6574053-6574095)
chr1 (226-296)||(8842666-8842736)
chr1 (216-285)||(11412709-11412779)
chr1 (244-294)||(21530728-21530778)
chr1 (215-285)||(31694640-31694710)
chr1 (219-296)||(26830625-26830701)
chr1 (236-297)||(43492456-43492517)
chr1 (268-296)||(9709857-9709885)
chr1 (215-255)||(10572535-10572575)
chr1 (215-286)||(32899937-32900009)
chr1 (215-251)||(35702543-35702579)
chr1 (215-263)||(45534131-45534179)
[»] chr8 (42 HSPs)
chr8 (215-297)||(43737752-43737834)
chr8 (215-285)||(34450962-34451032)
chr8 (215-297)||(3951477-3951559)
chr8 (215-297)||(33405325-33405407)
chr8 (216-297)||(926730-926811)
chr8 (216-297)||(3025587-3025668)
chr8 (215-279)||(26902105-26902169)
chr8 (215-284)||(29447040-29447109)
chr8 (215-285)||(22652035-22652105)
chr8 (215-285)||(29510234-29510304)
chr8 (216-297)||(20679337-20679418)
chr8 (218-285)||(5813640-5813707)
chr8 (222-296)||(126295-126369)
chr8 (215-297)||(36450695-36450777)
chr8 (217-297)||(40332227-40332307)
chr8 (215-297)||(14134735-14134817)
chr8 (215-285)||(15816059-15816129)
chr8 (215-285)||(18964238-18964308)
chr8 (215-279)||(8343381-8343445)
chr8 (215-279)||(16641910-16641974)
chr8 (214-286)||(24205748-24205820)
chr8 (215-278)||(6065587-6065650)
chr8 (219-290)||(31109463-31109534)
chr8 (215-288)||(37283756-37283826)
chr8 (215-297)||(4786279-4786361)
chr8 (215-297)||(18407755-18407837)
chr8 (215-285)||(21465471-21465541)
chr8 (215-285)||(28745557-28745627)
chr8 (215-285)||(29447503-29447573)
chr8 (226-274)||(22943301-22943349)
chr8 (215-295)||(24413500-24413580)
chr8 (215-278)||(4673355-4673418)
chr8 (215-286)||(11803317-11803388)
chr8 (215-297)||(39820465-39820546)
chr8 (227-297)||(8293861-8293931)
chr8 (215-257)||(13436911-13436953)
chr8 (239-285)||(26915200-26915246)
chr8 (214-251)||(13009422-13009459)
chr8 (269-297)||(13844591-13844619)
chr8 (219-279)||(22197676-22197736)
chr8 (230-294)||(44462151-44462215)
chr8 (230-294)||(44469684-44469748)
[»] chr3 (48 HSPs)
chr3 (215-297)||(13845466-13845548)
chr3 (215-296)||(35222975-35223056)
chr3 (215-297)||(40993276-40993358)
chr3 (215-297)||(20503501-20503583)
chr3 (215-297)||(55401111-55401193)
chr3 (233-297)||(2941594-2941658)
chr3 (215-297)||(8789489-8789573)
chr3 (216-297)||(28918037-28918120)
chr3 (215-285)||(41961580-41961650)
chr3 (216-285)||(4987222-4987291)
chr3 (213-297)||(15864869-15864952)
chr3 (215-285)||(10955000-10955073)
chr3 (227-297)||(7171537-7171607)
chr3 (214-272)||(15999950-16000008)
chr3 (215-297)||(18426985-18427067)
chr3 (215-285)||(25064966-25065036)
chr3 (221-297)||(3631720-3631796)
chr3 (215-279)||(27505305-27505369)
chr3 (213-296)||(24633341-24633423)
chr3 (215-278)||(34185053-34185116)
chr3 (215-297)||(8842365-8842447)
chr3 (215-285)||(14209172-14209242)
chr3 (77-133)||(9344001-9344057)
chr3 (215-279)||(14216957-14217021)
chr3 (215-279)||(14223086-14223150)
chr3 (216-280)||(29508503-29508567)
chr3 (213-284)||(37077418-37077490)
chr3 (215-290)||(4466541-4466616)
chr3 (215-285)||(15796224-15796294)
chr3 (216-297)||(24204983-24205064)
chr3 (216-297)||(25775545-25775624)
chr3 (215-297)||(26492146-26492228)
chr3 (215-288)||(11252021-11252094)
chr3 (215-279)||(10690193-10690257)
chr3 (241-285)||(14832158-14832202)
chr3 (253-297)||(25093538-25093582)
chr3 (218-273)||(11666015-11666070)
chr3 (215-286)||(55213020-55213091)
chr3 (215-257)||(4990913-4990955)
chr3 (259-297)||(6780404-6780442)
chr3 (215-265)||(40052380-40052430)
chr3 (268-297)||(7928486-7928515)
chr3 (253-294)||(45451592-45451633)
chr3 (215-263)||(1389908-1389956)
chr3 (215-286)||(25074841-25074913)
chr3 (215-286)||(27903684-27903756)
chr3 (214-258)||(34910392-34910436)
chr3 (215-275)||(49651717-49651777)
[»] chr2 (38 HSPs)
chr2 (215-288)||(24009340-24009413)
chr2 (215-297)||(20242668-20242750)
chr2 (215-285)||(36096305-36096375)
chr2 (215-297)||(28596505-28596587)
chr2 (216-297)||(2438661-2438742)
chr2 (215-285)||(34784912-34784982)
chr2 (215-284)||(26769571-26769640)
chr2 (215-296)||(34993923-34994004)
chr2 (215-297)||(18840954-18841036)
chr2 (215-285)||(30717460-30717530)
chr2 (215-285)||(35056927-35056997)
chr2 (215-285)||(37419802-37419872)
chr2 (215-297)||(38117100-38117182)
chr2 (227-296)||(12224260-12224329)
chr2 (216-284)||(19942314-19942382)
chr2 (215-279)||(41843500-41843564)
chr2 (215-270)||(18054717-18054772)
chr2 (222-296)||(5040771-5040845)
chr2 (215-297)||(15972909-15972991)
chr2 (215-280)||(11223794-11223858)
chr2 (215-296)||(37559014-37559095)
chr2 (233-297)||(5367228-5367292)
chr2 (215-279)||(42511323-42511387)
chr2 (215-285)||(32749755-32749825)
chr2 (218-297)||(37411188-37411267)
chr2 (215-284)||(27084318-27084387)
chr2 (214-250)||(18255944-18255980)
chr2 (214-285)||(23354581-23354652)
chr2 (215-285)||(22084757-22084830)
chr2 (215-297)||(34006931-34007014)
chr2 (216-278)||(15657930-15657992)
chr2 (216-285)||(23354926-23354995)
chr2 (215-285)||(44860379-44860449)
chr2 (268-297)||(34691799-34691828)
chr2 (268-297)||(34714211-34714240)
chr2 (215-263)||(10535686-10535734)
chr2 (226-278)||(14996171-14996222)
chr2 (221-297)||(21624303-21624374)
[»] chr5 (47 HSPs)
chr5 (218-297)||(30098982-30099061)
chr5 (215-285)||(6401557-6401627)
chr5 (215-297)||(21576686-21576768)
chr5 (215-285)||(21814320-21814390)
chr5 (216-297)||(30502330-30502411)
chr5 (216-297)||(30542673-30542754)
chr5 (215-296)||(42029789-42029870)
chr5 (215-297)||(43564917-43564999)
chr5 (216-297)||(21190998-21191079)
chr5 (217-289)||(39268541-39268613)
chr5 (215-285)||(21522809-21522879)
chr5 (215-285)||(21533375-21533445)
chr5 (215-285)||(21542089-21542159)
chr5 (210-293)||(17123088-17123170)
chr5 (227-297)||(26312805-26312875)
chr5 (215-297)||(28588615-28588697)
chr5 (215-285)||(39698600-39698670)
chr5 (217-278)||(19452998-19453059)
chr5 (215-279)||(31084382-31084446)
chr5 (215-297)||(14873553-14873640)
chr5 (216-279)||(43001859-43001922)
chr5 (219-297)||(21194068-21194146)
chr5 (246-296)||(23012380-23012430)
chr5 (217-285)||(18592132-18592200)
chr5 (215-279)||(30098391-30098455)
chr5 (226-285)||(15382533-15382592)
chr5 (215-285)||(7677764-7677834)
chr5 (215-297)||(42893396-42893478)
chr5 (216-285)||(19579760-19579829)
chr5 (215-280)||(27932288-27932353)
chr5 (215-296)||(32630676-32630757)
chr5 (216-297)||(18421779-18421864)
chr5 (216-276)||(23015926-23015986)
chr5 (218-297)||(4105295-4105374)
chr5 (215-286)||(16304367-16304438)
chr5 (216-263)||(41995534-41995581)
chr5 (215-285)||(3966562-3966632)
chr5 (215-265)||(23289999-23290049)
chr5 (216-274)||(24238603-24238661)
chr5 (221-263)||(32426832-32426874)
chr5 (215-285)||(32766873-32766943)
chr5 (218-280)||(36642696-36642757)
chr5 (264-297)||(16203785-16203818)
chr5 (215-278)||(19820329-19820389)
chr5 (222-266)||(17088358-17088402)
chr5 (215-251)||(35017125-35017161)
chr5 (215-279)||(40000494-40000558)
[»] chr7 (42 HSPs)
chr7 (215-297)||(18212974-18213056)
chr7 (215-297)||(15680845-15680927)
chr7 (215-296)||(598245-598326)
chr7 (215-279)||(5409772-5409836)
chr7 (215-279)||(9778559-9778623)
chr7 (217-297)||(39138480-39138560)
chr7 (215-290)||(32287404-32287479)
chr7 (215-297)||(20549827-20549909)
chr7 (215-297)||(21880188-21880270)
chr7 (215-285)||(24339701-24339771)
chr7 (215-297)||(21864844-21864926)
chr7 (215-279)||(32093955-32094020)
chr7 (215-279)||(43027405-43027469)
chr7 (215-282)||(25822717-25822784)
chr7 (215-297)||(1433490-1433577)
chr7 (243-297)||(5835283-5835337)
chr7 (215-285)||(33994260-33994330)
chr7 (215-284)||(7438766-7438835)
chr7 (225-297)||(12278871-12278943)
chr7 (215-272)||(29763130-29763187)
chr7 (215-286)||(7133213-7133285)
chr7 (217-257)||(8842282-8842322)
chr7 (219-279)||(13770750-13770810)
chr7 (226-294)||(26733343-26733411)
chr7 (215-282)||(4794951-4795018)
chr7 (215-294)||(22484064-22484143)
chr7 (222-297)||(41020532-41020607)
chr7 (215-277)||(17852056-17852118)
chr7 (215-297)||(24105714-24105796)
chr7 (215-257)||(35862027-35862069)
chr7 (215-296)||(3554447-3554528)
chr7 (264-297)||(9482970-9483003)
chr7 (214-279)||(20545184-20545249)
chr7 (216-285)||(26033392-26033461)
chr7 (223-292)||(41918906-41918975)
chr7 (215-279)||(2334314-2334378)
chr7 (215-263)||(6490786-6490834)
chr7 (253-285)||(9933332-9933364)
chr7 (215-295)||(18035806-18035885)
chr7 (225-297)||(27093364-27093436)
chr7 (225-297)||(27184865-27184937)
chr7 (215-263)||(28155624-28155672)
[»] chr6 (47 HSPs)
chr6 (215-285)||(18367895-18367965)
chr6 (215-285)||(16488520-16488590)
chr6 (215-297)||(34595170-34595252)
chr6 (214-297)||(9658915-9658999)
chr6 (215-279)||(17327591-17327655)
chr6 (217-297)||(32978842-32978922)
chr6 (216-279)||(12696383-12696446)
chr6 (215-297)||(13789190-13789272)
chr6 (215-297)||(13797809-13797891)
chr6 (215-297)||(28152134-28152216)
chr6 (215-296)||(33001230-33001311)
chr6 (217-297)||(7996325-7996401)
chr6 (217-297)||(8022400-8022476)
chr6 (215-285)||(8365449-8365519)
chr6 (215-285)||(10339055-10339125)
chr6 (215-297)||(17841530-17841612)
chr6 (215-279)||(31384984-31385048)
chr6 (215-294)||(4877982-4878060)
chr6 (215-285)||(16766756-16766826)
chr6 (215-297)||(28715331-28715413)
chr6 (215-296)||(7378016-7378097)
chr6 (257-296)||(30851637-30851676)
chr6 (216-297)||(7265535-7265616)
chr6 (215-285)||(34446618-34446689)
chr6 (215-285)||(7248417-7248487)
chr6 (215-273)||(8776909-8776967)
chr6 (215-285)||(9107300-9107370)
chr6 (215-297)||(13360314-13360395)
chr6 (215-297)||(13364646-13364728)
chr6 (215-297)||(32511607-32511689)
chr6 (215-263)||(4388150-4388198)
chr6 (262-297)||(7740677-7740712)
chr6 (215-250)||(10649371-10649406)
chr6 (214-297)||(5626640-5626719)
chr6 (215-297)||(6898222-6898304)
chr6 (215-297)||(7977771-7977853)
chr6 (215-285)||(8714039-8714109)
chr6 (215-285)||(24645529-24645599)
chr6 (215-269)||(31959214-31959268)
chr6 (268-297)||(5732504-5732533)
chr6 (264-297)||(19040388-19040421)
chr6 (215-263)||(7938170-7938218)
chr6 (217-284)||(8389411-8389478)
chr6 (234-286)||(9522949-9523001)
chr6 (215-279)||(9629448-9629512)
chr6 (269-297)||(21924930-21924958)
chr6 (219-279)||(24138485-24138545)
[»] chr4 (47 HSPs)
chr4 (215-285)||(5414102-5414172)
chr4 (215-294)||(23292927-23293006)
chr4 (215-294)||(19097836-19097914)
chr4 (214-285)||(30982807-30982878)
chr4 (219-297)||(49431062-49431140)
chr4 (215-285)||(12323968-12324038)
chr4 (215-297)||(12895215-12895297)
chr4 (215-284)||(24613631-24613700)
chr4 (215-297)||(2361916-2361998)
chr4 (215-297)||(28964189-28964271)
chr4 (215-297)||(34306745-34306827)
chr4 (215-285)||(46083921-46083991)
chr4 (215-279)||(3947702-3947766)
chr4 (214-280)||(848015-848081)
chr4 (215-297)||(8423659-8423741)
chr4 (215-297)||(16073430-16073512)
chr4 (215-285)||(19482727-19482797)
chr4 (215-285)||(19500788-19500858)
chr4 (215-297)||(35157926-35158008)
chr4 (215-272)||(715546-715603)
chr4 (215-272)||(752872-752929)
chr4 (215-279)||(36635384-36635448)
chr4 (218-297)||(12797282-12797361)
chr4 (217-268)||(28084589-28084640)
chr4 (215-274)||(29205527-29205586)
chr4 (215-285)||(53381531-53381602)
chr4 (215-277)||(32273462-32273524)
chr4 (215-297)||(35161072-35161154)
chr4 (259-297)||(54580008-54580046)
chr4 (214-279)||(14465005-14465070)
chr4 (256-297)||(36509074-36509115)
chr4 (215-275)||(18966567-18966627)
chr4 (209-297)||(20950362-20950450)
chr4 (211-250)||(4383449-4383488)
chr4 (215-290)||(4672026-4672101)
chr4 (226-297)||(21945539-21945610)
chr4 (215-290)||(23861370-23861445)
chr4 (215-285)||(24343560-24343631)
chr4 (215-285)||(22234820-22234890)
chr4 (219-285)||(30838269-30838335)
chr4 (215-272)||(3064869-3064926)
chr4 (216-285)||(4157197-4157266)
chr4 (216-285)||(4157484-4157553)
chr4 (216-265)||(22440559-22440608)
chr4 (244-297)||(29205480-29205533)
chr4 (264-297)||(40179626-40179659)
chr4 (215-251)||(5775305-5775341)
[»] scaffold0623 (1 HSPs)
scaffold0623 (215-282)||(5926-5993)
[»] scaffold0652 (1 HSPs)
scaffold0652 (215-297)||(403-485)
[»] scaffold0306 (1 HSPs)
scaffold0306 (216-285)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (216-285)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (215-297)||(45471-45553)
[»] scaffold0053 (1 HSPs)
scaffold0053 (215-297)||(8834-8916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (215-285)||(241653-241723)
[»] scaffold0050 (1 HSPs)
scaffold0050 (217-297)||(70314-70394)
[»] scaffold0475 (1 HSPs)
scaffold0475 (215-297)||(3344-3426)
[»] scaffold0380 (1 HSPs)
scaffold0380 (215-285)||(8649-8719)
[»] scaffold0019 (1 HSPs)
scaffold0019 (215-285)||(71784-71854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (214-280)||(92875-92941)
[»] scaffold0512 (1 HSPs)
scaffold0512 (215-296)||(4977-5058)
[»] scaffold0361 (1 HSPs)
scaffold0361 (215-280)||(14580-14645)
[»] scaffold0450 (1 HSPs)
scaffold0450 (215-285)||(8565-8635)
[»] scaffold0793 (1 HSPs)
scaffold0793 (215-272)||(4822-4879)
[»] scaffold0044 (1 HSPs)
scaffold0044 (221-285)||(53239-53303)
[»] scaffold0136 (1 HSPs)
scaffold0136 (215-285)||(3779-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (215-285)||(2987-3057)
[»] scaffold0036 (1 HSPs)
scaffold0036 (216-285)||(9678-9747)
[»] scaffold0227 (1 HSPs)
scaffold0227 (215-259)||(15045-15089)
[»] scaffold0697 (1 HSPs)
scaffold0697 (244-294)||(1683-1733)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-285)||(13472-13542)
[»] scaffold0022 (1 HSPs)
scaffold0022 (215-297)||(90879-90961)
[»] scaffold0057 (1 HSPs)
scaffold0057 (215-285)||(24083-24154)
[»] scaffold0008 (1 HSPs)
scaffold0008 (216-285)||(263303-263372)


Alignment Details
Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 4428898 - 4428704
Alignment:
Q  19 aatgcttggttagtggctgaaccacctgaatctgattttgaacctgttcttggtggtaacaaaaaattcttagtggagagtgagggcaagttgttgctag 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428898 aatgcttggttagtggctgaaccacctgaatctgattctgaacctcttcttggtggtaacaaaaaattcttagtggagagtgagggcaagttgttgctag 4428799  T
Q  119 tggtcatttatgagtttttaggttttgctagtggtgacagtgttttttggattaaggtgtttaggcttgatgagaaggcgcataaatgggtgaaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4428798 tggtcatttatgagtttttaggttttgctagtggtgacagtgttttttggattaaggtgtttaggcttgatgagaaggcgcgtaaatgggtgaaa 4428704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 10577676 - 10577758
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacac 10577758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 25934745 - 25934675
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25934745 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 32461394 - 32461465
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32461394 tatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 37598949 - 37598867
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacac 37598867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 41597411 - 41597482
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  41597411 tatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 12919064 - 12918986
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataat 292  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  12919064 atatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataat 12918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 47989632 - 47989556
Alignment:
Q  209 tgaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| |||||||||||||||||||| |||| |||||||||||  ||||||||| ||||||||||||||||||||||    
T  47989632 tgaaactatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 46348319 - 46348406
Alignment:
Q  210 gaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||| |||||||||||||||| ||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||    
T  46348319 gaaactatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 46348406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 18337447 - 18337365
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| |||| |||||| ||||| ||||||||| ||||||||||||||||| | |||||||||    
T  18337447 tatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacac 18337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 5898211 - 5898289
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||| |||| || |||||||| ||||  ||||||||||||||| ||||||||| |||||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacac 5898289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 22515828 - 22515910
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| || | |||||||||||||||||||||| | |||||||||    
T  22515828 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacac 22515910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 29163323 - 29163401
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||||| ||||| ||  ||| || |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataatta 29163401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 30749958 - 30749876
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| | |||| |||| ||| ||||||| |||| ||| |||||||||||||||||||||||||||||    
T  30749958 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacac 30749876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 30771409 - 30771327
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| | |||| |||| ||| ||||||| |||| ||| |||||||||||||||||||||||||||||    
T  30771409 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacac 30771327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 40917878 - 40917808
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||| |||| |||| ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  40917878 tatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 51410143 - 51410061
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| | ||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||| | |||||||||    
T  51410143 tatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacac 51410061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 42359391 - 42359472
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||  ||| |||||||||||||||| | |||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacac 42359472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 1486646 - 1486709
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||| ||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 9828173 - 9828103
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||||||||||||| ||||| |||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 40258874 - 40258956
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| |||| ||||||||||  ||||| |||| |||||||||| ||||||||||| | |||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacac 40258956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 40181976 - 40181907
Alignment:
Q  228 cactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||| |||| ||||||||||| ||||  ||||||||| |||||||||||||| ||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacac 40181907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 31015155 - 31015091
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||| ||  |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  31015155 tatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac 31015091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 52903364 - 52903285
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||| | | ||||| |||||||| ||||| |||||    ||||||||||||||||||||||||||||||    
T  52903364 tatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacaca---cgtgtccgacaccgacacatataattacac 52903285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 36878584 - 36878497
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtca-----gacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| |||||||||||||||||      |||| || ||||||| ||||||||||| |||||||||||    
T  36878584 tatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacac 36878497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 39130711 - 39130790
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||| |||||||| |||||| | |||||||||  ||||   ||||||| |||||||||||||||||||||||||||||    
T  39130711 gaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacac 39130790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 1815375 - 1815293
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||| ||||| |||||||  ||| ||||||||||| ||||| |||| |||||||||| ||||||||||| | |||||||||    
T  1815375 tatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacac 1815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 6427593 - 6427531
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 277  Q
    |||||||||||||||||| |  ||| ||||||||||| ||||| |||||||||||||||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| |||||  |||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 4440071 - 4440004
Alignment:
Q  78 caaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatttatgagtttttaggttttg 145  Q
    |||||||||||||||||||||||||||   |||| ||| ||||| ||| ||||||| |||||||||||    
T  4440071 caaaaaattcttagtggagagtgagggtgcgttgctgcgagtggacatctatgagtgtttaggttttg 4440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 6414932 - 6414995
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||||||||||||||| |||| |   ||||| | ||||||||||||||||||||||||||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgaca 6414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 27965941 - 27966021
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||| |||| | |||||| ||||| |  ||||||||||||||    
T  27965941 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacgg--acatataattacac 27966021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 36906125 - 36906055
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    |||||||||||||||||| ||| || ||| ||||||| ||||||||| || |||||||||||||| ||||||    
T  36906125 tatgaagcacggacactc-ttgcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacaca 36906055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 9629834 - 9629900
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||| ||||||  || |||||||| ||||| |||| ||||||||||||||| ||||||    
T  9629834 aagcacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacac 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 18556386 - 18556452
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccg 281  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| || |||||||| ||| |||||||    
T  18556386 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccg 18556452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21032335 - 21032265
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| |||||||||||||| |||||| || |  |||| ||||| |||||||||||||||| ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacac 21032265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 34712324 - 34712406
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||| || || |||||||| ||||  ||||||||||     |||||| |||||||||||||||||    
T  34712324 tatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacac 34712406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 48415664 - 48415702
Alignment:
Q  212 aaatatgaagcacggacactccttggataaggcgtgtcc 250  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  48415664 aaatatgaagcacggacactccttggattaggcgtgtcc 48415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 38078602 - 38078683
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||| | |||||| |||| ||||||||||  ||||   ||| |||||||||||||||||||||| | ||||||||    
T  38078602 tatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattaca 38078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 15765876 - 15765828
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    |||||||||||||||||| | |||| ||||||||||| |||||||||||    
T  15765876 tatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 6612112 - 6612171
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||| ||||||||||  ||||| ||||| | |||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacac 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 9690214 - 9690297
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacac 297  Q
    ||||||||||  ||||||   |||| ||||||||||| ||||| |||||||||| ||| ||||| ||||||||||| |||||||    
T  9690214 tatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacac 9690297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 34741964 - 34741894
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacg-tgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||| | |||| |||||||| |||||||| |||||| ||||||||| |||||| ||||    
T  34741964 tatgaagcacggacactcttcggattaggcgtgt-cccgtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 1704936 - 1704986
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 265  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||||    
T  1704936 tatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgt 1704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 5944412 - 5944342
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||| |||| |||| ||||||| || ||||||    
T  5944412 tatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 6574095 - 6574053
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 257  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  6574095 tatgaagcacggtcactccttggattaggcgtgtcccagtgtc 6574053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 8842666 - 8842736
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||| ||| || ||||||||||   |||| || ||||||||||||||||||| | |||||||||||||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattaca 8842736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 11412709 - 11412779
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtg-tcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||| ||||||||| |||||  ||||| ||||| || | |||||| ||||||||||    
T  11412709 atgaagcacggacactcctaggataaggcatgtcctagtgtcggacacatgttggtgtccaacaccgacac 11412779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 21530778 - 21530728
Alignment:
Q  244 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||  ||||| |||| |||||||||||||||||||||| ||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 21530728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 31694640 - 31694710
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||| |||||||| || |||||  | | |||| |||||||||||||||||    
T  31694640 tatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 26830701 - 26830625
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||||||  ||| ||||||||||| || ||  |||||||| ||||| |||| |||||| ||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattaca 26830625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 43492456 - 43492517
Alignment:
Q  236 ggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||| |||||||| || ||||| |||| |||| ||||| |||||||||||| ||||||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacac 43492517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 296
Target Start/End: Complemental strand, 9709885 - 9709857
Alignment:
Q  268 cgtgtccgacaccgacacatataattaca 296  Q
    |||||||||||||||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattaca 9709857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 10572535 - 10572575
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtg 255  Q
    |||||||||||||||||||||| || |||||||||| ||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtg 10572575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 32900009 - 32899937
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg-tgtccgacaccgacaca 286  Q
    ||||||||| ||||| |||| |||| ||| ||||||| ||||| |||| | |||| |||||||||||||||||    
T  32900009 tatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgacatgcgtcggtgtccgacaccgacaca 32899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 35702543 - 35702579
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccc 251  Q
    |||||||||||||||||||| |||| |||||||||||    
T  35702543 tatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 45534131 - 45534179
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    ||||||||||  |||||||| ||||||||||||||||  ||||||||||    
T  45534131 tatgaagcacaaacactcctcggataaggcgtgtccctatgtcagacac 45534179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 43737752 - 43737834
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacac 43737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 34450962 - 34451032
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34450962 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 3951477 - 3951559
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3951477 tatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacac 3951559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 33405325 - 33405407
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||| ||||||||||||| |||||| || |||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  33405325 tatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacac 33405407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 926730 - 926811
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| |||||| || |||||| ||||| ||||||||||| ||||||||||||||| |||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacac 926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 3025668 - 3025587
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| |||| || |||||| | ||||||||||||||||||||||||||| ||||| |||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacac 3025587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 26902105 - 26902169
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  26902105 tatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacac 26902169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||||||||||||||| |||| ||||||||||  ||||||||||| ||||||||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 22652105 - 22652035
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||| |||||||||||||||||||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 29510234 - 29510304
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||||| ||||||||||||||||||||    
T  29510234 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 20679337 - 20679418
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| |||||||||| || ||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacac 20679418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||   || ||||||||||| ||||| |||||||||||||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  222 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||| |||| || |||||||| || |  ||||||||||||||||||||| ||||||||||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 36450695 - 36450777
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||||||||| |||| ||||||||||  ||||| |||||| ||||||||||||||| |||| | |||||||||    
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacac 36450777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 40332307 - 40332227
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||| ||||||||||||| |||| ||||| ||||| ||||  |||||||||||||||| |||||||||| | |||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacac 40332227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 14134817 - 14134735
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||| ||||||||||||| | || ||||||||||  ||| | ||||||||||||||  |||||||||| ||||||||||||    
T  14134817 tatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacac 14134735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 15816059 - 15816129
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| ||  |||||||||||||||||| ||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 18964308 - 18964238
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||| ||||||||| | || |||||||    
T  18964308 tatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacac 18964238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 8343445 - 8343381
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||| ||||||| | |||| ||||||||||| ||||| ||||||||||||||| |||||    
T  8343445 tatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 16641910 - 16641974
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||| ||||||||| |||| ||| ||||||| |||| |||||| |||||||||||||||    
T  16641910 tatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 24205748 - 24205820
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    ||||||| ||||||||||||| |||| |||||||| || |||||||||| | || |||| |||||||||||||    
T  24205748 atatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacaca 24205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 6065587 - 6065650
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||||||||||||||||| || | |||||| || ||||| |||| |||||||||||||||    
T  6065587 tatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 31109463 - 31109534
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 290  Q
    |||||||||||||||| |||| ||||||||||| |||||| |||||   | |||||||||| ||||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatata 31109534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 37283756 - 37283826
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 288  Q
    |||||||||||| ||||||| |||| || |||||||| ||   ||||||||||||||||| |||||||||||||    
T  37283756 tatgaagcacgggcactcctcggattagacgtgtcccggt---agacacgtgtcgtgtcccacaccgacacata 37283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 4786279 - 4786361
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||| ||| ||||| | |||| |  | ||  |||| |||||| ||||||||||||||||||||||||||    
T  4786279 tatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacac 4786361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 18407837 - 18407755
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||   || ||||||||||  ||||| |||| |||||||||||| || |||||| | |||||||||    
T  18407837 tatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacac 18407755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21465541 - 21465471
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||   || |||||| |||| ||||  ||||||||||||||||||||| |||||    
T  21465541 tatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacac 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 28745627 - 28745557
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||| || || | |||| | ||| | |||| ||||||||||||||||||||||    
T  28745627 tatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 29447573 - 29447503
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||| || | |||||| ||||| ||||| ||||||||| |||||||||||    
T  29447573 tatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 274  Q
    ||||||||| |||| ||||||||||| ||||| ||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 24413500 - 24413580
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattac 295  Q
    ||||||||||||||||| || |||| || ||||||||  |||  ||||||  ||||||||||||| ||||| |||||||||    
T  24413500 tatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattac 24413580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 4673355 - 4673418
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||||| |||||||||||||| |||||||| || ||||| || | | |||||||||||||    
T  4673355 tatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 11803388 - 11803317
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    |||||||||||||||||||| |||| || ||||| || ||||| |||| ||||||| ||| ||||| |||||    
T  11803388 tatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacaca 11803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 39820546 - 39820465
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||| || |||| |||||||| |||||||| |||||| ||| |||||||||| |||||| ||| |||||||    
T  39820546 tatgaagcacggacacttctcggattaggcgtgt-cccgtgtcggacacgcgtcggtgtccgaca-cgacacctatgattacac 39820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 8293931 - 8293861
Alignment:
Q  227 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| |||| ||| ||||||  |||||||| | ||||| |||  |||||||||||||||||||||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacac 8293861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 13436911 - 13436953
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 257  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  13436911 tatgaagcacagacactccttggattaggcgtgtcccggtgtc 13436953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 26915200 - 26915246
Alignment:
Q  239 taaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  26915200 taaggcgtgtcccaatgtctgacacgtatcgtgtccgacaccgacac 26915246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 13009422 - 13009459
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccc 251  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  13009422 atatgaagcacggacgctccttggattaggcgtgtccc 13009459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 297
Target Start/End: Original strand, 13844591 - 13844619
Alignment:
Q  269 gtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacac 13844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 22197676 - 22197736
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||  ||| |||||||  || ||||| |||||||||| ||||||||||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 44462151 - 44462215
Alignment:
Q  230 ctccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    ||||| |||| || |||||||| ||||| |||| || ||||||| ||||||||||||||| ||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgatta 44462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 44469684 - 44469748
Alignment:
Q  230 ctccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    ||||| |||| || |||||||| ||||| |||| || ||||||| ||||||||||||||| ||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgatta 44469748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 13845466 - 13845548
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  13845466 tatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacac 13845548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 35223056 - 35222975
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35223056 tatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattaca 35222975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 40993276 - 40993358
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  40993276 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacac 40993358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 20503583 - 20503501
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||| |||||||||| | |||||||||    
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacac 20503501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 55401193 - 55401111
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 55401111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 2941658 - 2941594
Alignment:
Q  233 cttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2941658 cttggataaggcatatccccatgtcagacacgtgtcgtgtccgacaccgacacatataattacac 2941594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 8789489 - 8789573
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt--cgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| |||| ||||  ||||||||||||||||||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacac 8789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 28918120 - 28918037
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc--cgacaccgacacatataattacac 297  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||||||  |||||||||||| | |||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacac 28918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 41961580 - 41961650
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 4987222 - 4987291
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 15864952 - 15864869
Alignment:
Q  213 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||| |||||| ||| |||||||    
T  15864952 aatatgaagcacggacactctttggattaggcgtgt-cccgtgtcagacacgtgtcggtgtccgaca-cgacacctatgattacac 15864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 10955073 - 10955000
Alignment:
Q  215 tatgaagcacggacact---ccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||   ||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  10955073 tatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 7171607 - 7171537
Alignment:
Q  227 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||||||||||||| |||| | |||||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacac 7171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 15999950 - 16000008
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  15999950 atatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 18427067 - 18426985
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||| |||||||||||||  ||| ||| ||||||| ||| | |||||||||||| ||||||||||||| ||||||||||||    
T  18427067 tatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacac 18426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 25065036 - 25064966
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||| |||||| |||||||| ||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  25065036 tatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 3631796 - 3631720
Alignment:
Q  221 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||| |||  ||||||||||  ||||| |||| |||||||||||||||| | |||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacac 3631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 27505369 - 27505305
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||| |||| |||| |||||| ||||| ||||||||||||||| |||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 24633341 - 24633423
Alignment:
Q  213 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||||||| ||||| | | || |||||||| || |||| ||||| ||||||||||| |||||||||||||||||||||    
T  24633341 aatatgaagcacgggcactc-tcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattaca 24633423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 34185053 - 34185116
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||| |||| |||||||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 8842447 - 8842365
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||| |  | ||  ||| |||||||||| |||||||||| ||||||||||||    
T  8842447 tatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacac 8842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 14209242 - 14209172
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||| ||||||| ||| || ||||  ||||  ||||||||||||||||||||||||||    
T  14209242 tatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 9344057 - 9344001
Alignment:
Q  77 acaaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatttatgagt 133  Q
    |||||||||||||||| ||||| |||||  ||||||||||||||| |||||||||||    
T  9344057 acaaaaaattcttagtcgagagagagggagagttgttgctagtggacatttatgagt 9344001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||  ||||||||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||  ||||||||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 29508567 - 29508503
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    |||||||||||||||| ||||||| || |||||||| ||||| |||  |||||||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacacc 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 37077490 - 37077418
Alignment:
Q  213 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt-cgtgtccgacaccgaca 284  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||| |||| | || ||||| |||||||||||    
T  37077490 aatatgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgaca 37077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 4466541 - 4466616
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 290  Q
    |||||||||||||||||||| | ||||| |||||||| ||||| ||||| | | || |||||||||| ||||||||    
T  4466541 tatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatata 4466616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 15796224 - 15796294
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| |||||| |||||| |||||||| || ||||  ||||||||| |||||||||||| ||||    
T  15796224 tatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 24204983 - 24205064
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| | || ||||||||||  ||||| |||||| ||| |||||||||| |||||| |||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacac 24205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 25775624 - 25775545
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| |||||||| |||| ||||||||||  ||||| ||||||   |||||||||||||||||| | |||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga--cgtgtccgacaccgacacttgtaattacac 25775545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 26492146 - 26492228
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| |||||| |||| |||| || ||||||   |||||||||| ||||||||||||||||||| || | |||||||||    
T  26492146 tatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacac 26492228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 11252094 - 11252021
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 288  Q
    |||||||||| ||||||||| |||| |||||||| ||  || | ||||||||| ||||| ||||||||||||||    
T  11252094 tatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata 11252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 10690193 - 10690257
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||  ||| |||| |||| ||| ||||| ||||||||||||||||| |||||||||||    
T  10690193 tatgaagcacatacattcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacac 10690257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 14832202 - 14832158
Alignment:
Q  241 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  14832202 aggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 25093582 - 25093538
Alignment:
Q  253 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacac 25093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 11666070 - 11666015
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc 273  Q
    ||||||||||||||||||| || |||||||| ||  | ||||||||||||||||||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtc 11666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 55213091 - 55213020
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    |||| |||||||| ||| ||||||| | ||||||| | ||||| ||||||||| ||| ||||||||||||||    
T  55213091 tatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacaca 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 4990913 - 4990955
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 257  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  4990913 tatgaagcacggacactcctcggattaggcgtgtccacgtgtc 4990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 6780404 - 6780442
Alignment:
Q  259 gacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacac 6780442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 40052430 - 40052380
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 265  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |||||||    
T  40052430 tatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Complemental strand, 7928515 - 7928486
Alignment:
Q  268 cgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacac 7928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 45451633 - 45451592
Alignment:
Q  253 gtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    ||||| |||| |||||||||||||||||||||||||| ||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattatta 45451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    ||||||||||||||||||||||||| |||| |||||  ||||| |||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 25074913 - 25074841
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtg-tcgtgtccgacaccgacaca 286  Q
    ||||||||||| |||||||| |||| ||| ||||||| ||||| |||||| | | ||||| ||||||||||||    
T  25074913 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacaca 25074841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 27903756 - 27903684
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacaca 286  Q
    ||||||||||||||||| || |||| |||| ||  || |||||||||||| ||| || |||||||||||||||    
T  27903756 tatgaagcacggacacttctcggattaggcatgatccagtgtcagacacgcgtcggtatccgacaccgacaca 27903684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 34910436 - 34910392
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtca 258  Q
    ||||||||||||||||||||| |||| || |||||||| ||||||    
T  34910436 atatgaagcacggacactcctcggattagacgtgtcccggtgtca 34910392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 49651717 - 49651777
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg 275  Q
    ||||||||||||||||| || |||| ||| ||||||| ||||| || | ||||||||||||    
T  49651717 tatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 24009413 - 24009340
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24009413 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 24009340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 20242668 - 20242750
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  20242668 tatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacac 20242750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 36096305 - 36096375
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  36096305 tatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacac 36096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 28596587 - 28596505
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacac 28596505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 2438661 - 2438742
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||||||||||||||| | |||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacac 2438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 34784912 - 34784982
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  34784912 tatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacac 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 26769640 - 26769571
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||| |||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 34993923 - 34994004
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||| |||||||||| || ||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||||    
T  34993923 tatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattaca 34994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 18840954 - 18841036
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||| |||||||||| ||||||||||| | |||||||||    
T  18840954 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacac 18841036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 30717460 - 30717530
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||||||| |||||| |||| |||||  ||||||||||||||||||| ||||||    
T  30717460 tatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 35056997 - 35056927
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  35056997 tatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 37419872 - 37419802
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||  |||||||||||||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 38117100 - 38117182
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||| |||||||||||| |||| | |||||||||    
T  38117100 tatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacac 38117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 12224329 - 12224260
Alignment:
Q  227 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||| | ||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattaca 12224260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 41843564 - 41843500
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||    
T  41843564 tatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 18054717 - 18054772
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgt 270  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  18054717 tatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 5040845 - 5040771
Alignment:
Q  222 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||||||||||  ||||||||||| | ||| ||||| ||||||||||||||||||||| | ||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattaca 5040771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 15972991 - 15972909
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||| || | |||| ||| ||||||| | ||| ||||||||||||||||||||||||||| | |||||||||    
T  15972991 tatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 15972909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 11223794 - 11223858
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||||| |||||||||||||||||    
T  11223794 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 37559095 - 37559014
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||||||||||||| |||| | |||||| || ||||| ||||||||||  ||||||||||||||| | ||||||||    
T  37559095 tatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattaca 37559014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 5367292 - 5367228
Alignment:
Q  233 cttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||| ||||||||||| | ||| || | ||||||||||||||||||||||||||||||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacac 5367228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 42511323 - 42511387
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||||||| |||||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 32749755 - 32749825
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||| |||||||||||| ||||||||||||||| ||||| ||||| ||||  |||||||| ||||||    
T  32749755 tatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacac 32749825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 37411188 - 37411267
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||| | ||||||| |||  ||||||||||| ||||| |||||| ||||||| ||||| ||||||||||||| ||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacac 37411267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 27084387 - 27084318
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||||  |||||||||  ||| ||||||||| | ||||  ||||||||||||||||||||||||||    
T  27084387 tatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 18255944 - 18255980
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtcc 250  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18255944 atatgaagcacggacactccttggattaggcgtgtcc 18255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 23354581 - 23354652
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 285  Q
    ||||||| ||||||||||||| |||| |||||||| ||||||||||||||  ||| ||||||||| |||||||    
T  23354581 atatgaaccacggacactcctcggattaggcgtgt-cccgtgtcagacaccggtcggtgtccgaccccgacac 23354652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 22084757 - 22084830
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtg---tcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||| | |||| ||||||||||| |||   |||||||||||| ||||||||||| |||||    
T  22084757 tatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 34006931 - 34007014
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt-cgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||| || ||| |||| || ||||||||||||  |  |||||| |||||||||| ||| |||||||    
T  34006931 tatgaagcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacac 34007014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 15657992 - 15657930
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||| |||||||||| |||  ||||||||||| | ||| ||||||||||| ||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgaca 15657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 23354926 - 23354995
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 285  Q
    |||||||| |||||||||| |||| |||||||| ||||||||||||||| ||| |||||| || |||||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgt-cccgtgtcagacacgggtcggtgtccaaccccgacac 23354995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 44860449 - 44860379
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| | || ||| |||||||  |||| ||||| |||||||||| ||||| ||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacac 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Original strand, 34691799 - 34691828
Alignment:
Q  268 cgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacac 34691828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Original strand, 34714211 - 34714240
Alignment:
Q  268 cgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacac 34714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 10535686 - 10535734
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    ||||||||||| |||||||| |||| ||||||||||  |||||||||||    
T  10535686 tatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 14996171 - 14996222
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    ||||||||| |||| |||||||| || ||||||||||||||| ||||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgaca 14996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 21624374 - 21624303
Alignment:
Q  221 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| ||| |||||||  |||| ||||     |||||||||||||||||| | |||||||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggaca-----cgtgtccgacaccgacacttgtaattacac 21624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 9e-33; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 30098982 - 30099061
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacac 30099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 21576686 - 21576768
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacac 21576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21814390 - 21814320
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21814390 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 30502330 - 30502411
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||| ||||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacac 30502411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 30542673 - 30542754
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||| ||||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacac 30542754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 42029870 - 42029789
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||| |||||||||||||| ||||||||||||||  |||| |||||| ||||||||||||||||||| |||||||||||||    
T  42029870 tatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattaca 42029789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 43564999 - 43564917
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||| || |||| ||||||||||| | ||| ||||| ||||||||||||||||||||| |||||||||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacac 43564917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 21190998 - 21191079
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||| |||| ||||||||||| | ||| ||||||||| ||||||||||||||||| | |||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacac 21191079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 39268541 - 39268613
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatat 289  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacatat 39268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21522879 - 21522809
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| |||||||||||| |||||| ||||||||||| ||| | |||||||||||||||||||||||||||    
T  21522879 tatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21533445 - 21533375
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| |||||||||||| |||||| ||||||||||| ||| | |||||||||||||||||||||||||||    
T  21533445 tatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 21542159 - 21542089
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| ||||||||| |||||||||  |||||||||| ||||| |||||||||||||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 17123170 - 17123088
Alignment:
Q  210 gaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatt 293  Q
    |||| |||||||||||||||||||| |||| |||||||| |||||||| |||| || |||||||| ||||||||| ||||||||    
T  17123170 gaaactatgaagcacggacactcctcggattaggcgtgt-cccgtgtcggacatgtttcgtgtccaacaccgacatatataatt 17123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 26312875 - 26312805
Alignment:
Q  227 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| |||| ||| ||||||  ||||||||||||| |||||||||||||||| ||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacac 26312805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 28588615 - 28588697
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||| | |||| | ||||||||  |||||||| | |||||||||||||||||||||| |||||||||||    
T  28588615 tatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacac 28588697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 39698670 - 39698600
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| || || |||||||||||||||||||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 19452998 - 19453059
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||| |||||||||||||||    
T  19452998 tgaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgaca 19453059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 31084446 - 31084382
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||| ||||||||||||| |||| |||| |||||| ||||| |||||||||||||||||||||    
T  31084446 tatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 14873640 - 14873553
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc-----gacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||||| ||||  ||||||||| | ||||     |||||||||||||||||||||||    
T  14873640 tatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacac 14873553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||||| |||| ||||||||||  ||||  |||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 21194068 - 21194146
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||| |||| ||||||| ||| ||||| |||| ||||||||||| ||||| | || |||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacac 21194146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 23012380 - 23012430
Alignment:
Q  246 tgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattaca 23012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 18592200 - 18592132
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||| | | || || ||||||||  |||||||||||||| |||||||||||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 30098455 - 30098391
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||| |||| |||| ||| ||||||  ||||| |||||||||||||||||||||    
T  30098455 tatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||| |||| ||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 7677834 - 7677764
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||| ||||| |||| ||||||||||| ||||| |||| ||| |||||| |||||||||||    
T  7677834 tatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 42893478 - 42893396
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| ||||||||||   || ||||||||||  ||||| ||||||||| ||||| ||||||||||| | |||||||||    
T  42893478 tatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacac 42893396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 19579829 - 19579760
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| |||| |||||||| |||| ||||||||||| |||| |||||  ||||||||||||||| |||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacac 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 27932353 - 27932288
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||||||  |||||||| | || ||||||||||  ||||| ||||||||||||||||||||||    
T  27932353 tatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 32630676 - 32630757
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||  ||||||||| | || ||| ||||| |  |||| |||||||||||| |||||||| ||||||||||||||||    
T  32630676 tatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattaca 32630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 18421779 - 18421864
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtc----cccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| ||||||||| |||| || ||||||    || ||| | |||| |||||||||||||| |||||||||||||||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacac 18421864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 23015926 - 23015986
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccga 276  Q
    ||||||| ||||||||||| |||| |||||||||||  |||| ||||| ||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccga 23015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 4105374 - 4105295
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||| |||| ||||||||||| || |||||||| | ||| ||| || ||| |||| | |||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacac 4105295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 16304367 - 16304438
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    ||||||||||||||| |||| |||| || |||||| | ||||| | |||||||||||||||| || ||||||    
T  16304367 tatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 41995581 - 41995534
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    ||||||||||||||||||| |||| |||||||||| |||||| |||||    
T  41995581 atgaagcacggacactcctaggattaggcgtgtcctcgtgtccgacac 41995534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 3966632 - 3966562
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| || ||||||||  |||  ||||| ||| ||||||||||| |||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacac 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 23289999 - 23290049
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 265  Q
    ||||||||||||||| | ||||||| || |||||||| |||||||||||||    
T  23289999 tatgaagcacggacattgcttggattagacgtgtcccggtgtcagacacgt 23290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 24238603 - 24238661
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 274  Q
    ||||||||||||||||||| |||| | || |||||| ||||  ||||||||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtcc 24238661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 32426832 - 32426874
Alignment:
Q  221 gcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||    
T  32426832 gcacggacactcctcggataaggcgtatccccgtgttagacac 32426874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 32766873 - 32766943
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||| || ||| |||  ||||| |||||||||||| | ||||||||||||    
T  32766873 tatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacac 32766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 36642696 - 36642757
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||| |||||||||   || ||||||||||| ||||| ||||||||||||||||||||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacacc 36642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 16203785 - 16203818
Alignment:
Q  264 gtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||| ||||||||||||||||||||||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacac 16203818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 19820329 - 19820389
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 278  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| ||||   |||||||||||||    
T  19820329 tatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  222 cacggacactccttggataaggcgtgtccccgtgtcagacacgtg 266  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 35017161 - 35017125
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccc 251  Q
    |||||||||||||||||||| |||| |||||||||||    
T  35017161 tatgaagcacggacactcctcggattaggcgtgtccc 35017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 40000494 - 40000558
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||||||  |||||| |||||| | ||||||| ||| ||||| || ||||||    
T  40000494 tatgaagcacggacactcctcagataagacgtgtctcggtgtcaggcacatgtcgcgtacgacac 40000558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 18212974 - 18213056
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  18212974 tatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacac 18213056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 15680927 - 15680845
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| | || || |||||| | ||||| ||||||||||||||||||||||||||| |||||||||||    
T  15680927 tatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacac 15680845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 598326 - 598245
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| ||||||||||||||| ||||||||||| || |||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 5409772 - 5409836
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 9778623 - 9778559
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 39138560 - 39138480
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| || |||| | ||||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacac 39138480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 32287404 - 32287479
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 290  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| ||||| |||| |||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatata 32287479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 20549909 - 20549827
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||| ||||||| |||| ||||||||| |  |||| |||| |||| |||||||||||||||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacac 20549827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 21880270 - 21880188
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||| || |||| ||||||||||  ||||| |||| |||||||||||||||||||||| | |||||||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacac 21880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 24339771 - 24339701
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||| ||||||| |||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  24339771 tatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 21864926 - 21864844
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||||||||| | || || |||||||| ||||| |||||||||||||||||||| |||||| | |||||||||    
T  21864926 tatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacac 21864844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 32093955 - 32094020
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtcccc-gtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||| |||||||||||||||||||||    
T  32093955 tatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 43027405 - 43027469
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||| | |||| ||||||||||| ||||| ||||||||||||||| |||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 25822784 - 25822717
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 282  Q
    |||||| |||||||||||||| ||| |||| ||||||  ||||||||||||||||||||||| |||||    
T  25822784 tatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccga 25822717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 1433577 - 1433490
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| || |||||||  ||||| ||||| |||| ||||     ||||||||||||||||||||||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacac 1433490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 5835337 - 5835283
Alignment:
Q  243 gcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| || |||||||| |||| |||| |||||||||||||||||||||||    
T  5835337 gcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacac 5835283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 33994330 - 33994260
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||| |||| ||||||||||||| ||||||||| | ||||  |||| |||||||||| |||||||||||    
T  33994330 tatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacac 33994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 7438835 - 7438766
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||||||||||||||||| || ||||||||||  |||||  ||| |||||||||  ||||||||||    
T  7438835 tatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgaca 7438766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 12278943 - 12278871
Alignment:
Q  225 ggacactccttggataaggcgtgtccccgtgtcagacacgtg-tcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| |||| ||| ||||||| |||||||||||| | | |||||||||| ||||||||||||||||||    
T  12278943 ggacactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgaca-cgacacatataattacac 12278871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 29763130 - 29763187
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||||||||||||||||| |||| ||||||||||   |||| ||||||||||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 7133213 - 7133285
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacaca 286  Q
    |||||||||||||| |||||  ||| ||| ||||||| ||||| |||||| ||| ||||||||||||||||||    
T  7133213 tatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacaca 7133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 8842282 - 8842322
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtc 257  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtc 8842322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||| | |||| |||||||| || ||||| ||||||||| |||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 26733411 - 26733343
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    ||||| ||| |||| |||||||| ||||| || |||| | |||||||||||||||||||||| ||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaatta 26733343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 4795018 - 4794951
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 282  Q
    |||||||||| |||||| ||||||| || |||||    |||||||| |||||||||||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccga 4794951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 22484143 - 22484064
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    ||||||||||||||||| || |||| || | |||| |  |||| |||| ||||| |||| ||||||||||||||||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataatta 22484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 41020607 - 41020532
Alignment:
Q  222 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| || |||||| || |||||||| |||| ||| | ||||||||| | |||||||| |||||||||||||    
T  41020607 cacggacattctttggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacac 41020532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 17852118 - 17852056
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 277  Q
    |||||||||||||||||||| | || ||| ||||| | ||||| |||||||||| ||||||||    
T  17852118 tatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 24105796 - 24105714
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||  |||||||| || | ||||||||||| ||||| ||||| ||| ||| ||||| ||||||| | |||||||||    
T  24105796 tatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacac 24105714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 35862069 - 35862027
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 257  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  35862069 tatgaagcacggacactcctcggattaggcgtgtcctcgtgtc 35862027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 3554447 - 3554528
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||| ||||||| | | || || |||||| | |||| ||| | |||||||||||||||||||||  ||||||||||    
T  3554447 tatgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacatctataattaca 3554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 9483003 - 9482970
Alignment:
Q  264 gtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||| |||||||||||||||||||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacac 9482970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 20545184 - 20545249
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||| ||||||||| | || |  |||||||||||||| |||| ||||||||| ||||||    
T  20545184 atatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgtacgacac 20545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 26033392 - 26033461
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| ||||||||||||| |||| ||| ||||| | || || |||||||||| |||| |||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 41918975 - 41918906
Alignment:
Q  223 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataat 292  Q
    |||||||||||| |||||| ||| ||  ||||||||||||| || ||||| ||||| ||||| |||||||    
T  41918975 acggacactcctcggataatgcgggtttccgtgtcagacacttgccgtgttcgacaacgacatatataat 41918906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 2334378 - 2334314
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||| ||||||||||||| |||| || |||||  | ||||| |||| ||||||||||||||||    
T  2334378 tatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 6490834 - 6490786
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    |||||||||||||||||||| |||| | ||||||||| ||||| |||||    
T  6490834 tatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 9933364 - 9933332
Alignment:
Q  253 gtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||||||||||||||||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacac 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 18035806 - 18035885
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattac 295  Q
    |||||||||||||||||||| |||| || |||||  |||||||||||| ||||| | ||  |||| ||||||| |||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgt-tccgtgtcagacatgtgtcctatctcacactgacacatgtaattac 18035885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 27093364 - 27093436
Alignment:
Q  225 ggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| | |||| ||| ||||||  ||||| ||||| |||||||||  |||||||| |||||||||||||    
T  27093364 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacac 27093436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 27184937 - 27184865
Alignment:
Q  225 ggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| | |||| ||| ||||||  ||||| ||||| |||||||||  |||||||| |||||||||||||    
T  27184937 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacac 27184865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 28155672 - 28155624
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    ||||||||||||||| ||||||||| ||||||||||  ||||| |||||    
T  28155672 tatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 18367965 - 18367895
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18367965 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 16488520 - 16488590
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16488520 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 34595252 - 34595170
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  34595252 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacac 34595170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 9658999 - 9658915
Alignment:
Q  214 atatgaagcacggacactccttgga-taaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||  ||||||||| ||||||||||||    
T  9658999 atatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacac 9658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 17327591 - 17327655
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 32978842 - 32978922
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||| || |||||||| ||||| |||| |||||||||||||||||||||| | |||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacac 32978922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 13789272 - 13789190
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||  || ||||||||||||||    
T  13789272 tatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacac 13789190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 13797891 - 13797809
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||  || ||||||||||||||    
T  13797891 tatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacac 13797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 28152216 - 28152134
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| |||||||| |||| |||| |||||| ||||| ||||||||||||||||||||||||||| | |||||||||    
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 28152134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 33001230 - 33001311
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||  |||||| |||||| |||||| |  | ||||||||||||||||||||||||||||||||||||||||||||    
T  33001230 tatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 33001311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 7996325 - 7996401
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    |||||||||| |||||||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacac 7996401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 8022476 - 8022400
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    |||||||||| |||||||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacac 8022400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 8365449 - 8365519
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  8365449 tatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 10339055 - 10339125
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  10339055 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 17841530 - 17841612
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| ||||| ||||||||||||||||| ||| | |||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacac 17841612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 31385048 - 31384984
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||| ||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 4878060 - 4877982
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||||||||||||||| |||| |||||||| || ||||| |||| |||||||||||||||||||||| | ||||||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 4877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 16766826 - 16766756
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||| || | |||| ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  16766826 tatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 28715413 - 28715331
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||||| || | || ||||||||||| |||||  |||||||||||||||||||||||||| | |||||||||    
T  28715413 tatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacac 28715331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 7378097 - 7378016
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||||||| ||  ||| || |||||||| ||||| ||  | ||||||||||||||||||||||||||||||||    
T  7378097 tatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattaca 7378016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 30851676 - 30851637
Alignment:
Q  257 cagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattaca 30851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 7265535 - 7265616
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||| ||||| |||| |||| | | || ||||| |||| || | |||||||||||||||||||||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacac 7265616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 34446689 - 34446618
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 285  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||| ||| ||||  |||||||||||    
T  34446689 tatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgttggacaccgacac 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 7248487 - 7248417
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| ||||  | |||||||| ||||| ||||| ||| |||||| ||||||||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 8776909 - 8776967
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc 273  Q
    |||||||||||||||||||| |||| ||| ||||| | ||||| |||||||||||||||    
T  8776909 tatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 9107300 - 9107370
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||| ||||||| |||| ||| ||||||| ||||| |||||  || |||||||||||||||||    
T  9107300 tatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 13360314 - 13360395
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||| | |||| ||||||||| | ||||| ||||  ||| ||||| |||||||| ||||||||||||||    
T  13360314 tatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacac 13360395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 13364646 - 13364728
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||| ||||||| | |||  || |||||||  |||||||||| || |||||||| |||||||||||||| |||||||    
T  13364646 tatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacac 13364728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 32511607 - 32511689
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||  ||| |||||||  ||  |||||||||  |||||| ||||||||| |||| |||||||||||    
T  32511607 tatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacac 32511689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 4388198 - 4388150
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    |||||||||| |||||| || ||||||||||||||| ||||||||||||    
T  4388198 tatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacac 4388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 7740712 - 7740677
Alignment:
Q  262 acgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||| |||||||||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacac 7740677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 10649406 - 10649371
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtcc 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10649406 tatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 5626640 - 5626719
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||  |||||||| ||||||||| ||| ||| |  |||    ||||||||||||||||||||||||||| ||||||    
T  5626640 atatgaagcacaaacactcctcggataaggcatgttcccattacag----gtgtcgtgtccgacaccgacacatatatttacac 5626719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 6898222 - 6898304
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| |||||| | |||| ||||||||  | ||||  ||||||  ||||||||||||||||||| | |||||||||    
T  6898222 tatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacac 6898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 7977771 - 7977853
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||||||||| ||| ||||||||  |  |||| ||||  ||| ||||||||||||||||| | |||||||||    
T  7977771 tatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacac 7977853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 8714109 - 8714039
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||  ||||||||| ||||  ||||||||||  |||| || | ||||||||||||||||||||||    
T  8714109 tatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 24645599 - 24645529
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||| | |||| || ||||||   ||||| ||||||||||||||| |||||||||||    
T  24645599 tatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 31959268 - 31959214
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg 269  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| ||||| |||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Original strand, 5732504 - 5732533
Alignment:
Q  268 cgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacac 5732533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 19040421 - 19040388
Alignment:
Q  264 gtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||| |||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacac 19040388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 7938218 - 7938170
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 263  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| |||||    
T  7938218 tatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 8389411 - 8389478
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagaca-cgtgtcgtgtccgacaccgaca 284  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| |||| ||||| | ||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgaca 8389478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 9523001 - 9522949
Alignment:
Q  234 ttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 286  Q
    |||||| ||||||||| | ||||| |||||||||||  |||||||||||||||    
T  9523001 ttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacaca 9522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 9629512 - 9629448
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    ||||||||| |||||||||| |||| || |||||| | ||||| ||||| ||| |||||||||||    
T  9629512 tatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 297
Target Start/End: Original strand, 21924930 - 21924958
Alignment:
Q  269 gtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacac 21924958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 24138545 - 24138485
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||| | |||| |||| |||| | |||||||||||||||| ||||| ||||    
T  24138545 aagcacggacactcttcggattaggcatgtctctgtgtcagacacgtgtcatgtccaacac 24138485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 5414102 - 5414172
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  5414102 tatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 23292927 - 23293006
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||| | ||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 23293006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 19097836 - 19097914
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  19097836 tatgaagcacagacactctttgg-taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataatta 19097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 30982807 - 30982878
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  30982807 atatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 49431140 - 49431062
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||| |||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||| | |||||||||    
T  49431140 aagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacac 49431062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||||||| |||| |||||| || ||||||||| ||||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 12895215 - 12895297
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| |||||||| |||| |||||||||||  |||| || || ||||||||||||||||||||| |||||||||||    
T  12895215 tatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacac 12895297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 24613631 - 24613700
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 284  Q
    |||||||||||||||||||| |||| || |||||||  ||||||||||||||||||||| ||||||||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 2361916 - 2361998
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||| |  ||| ||| ||||| | |||||||||||| |||||||||||||||||||| | |||||||||    
T  2361916 tatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacac 2361998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 28964189 - 28964271
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||| || | |||||||||||||||| ||||| | |||||||||    
T  28964189 tatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacac 28964271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 34306745 - 34306827
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||| ||||  ||| ||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||    
T  34306745 tatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 34306827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 46083921 - 46083991
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||||||| || |||||    
T  46083921 tatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacac 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||| |||| ||| ||||||  ||||| |||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 848081 - 848015
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||| |||||||||||||||||| ||| ||||||| ||||  ||||||| ||||||||||||||    
T  848081 atatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 8423659 - 8423741
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||| ||||||||||| ||  ||| ||||||||||| ||||| ||||  ||||||||||||||||||||  |||||||||||    
T  8423659 tatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacac 8423741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 16073512 - 16073430
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||||||| |||| |||||||||   ||||| |||| || ||||||||||||||||||| | |||||||||    
T  16073512 tatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacac 16073430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 19482797 - 19482727
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| |||||||| |||| ||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  19482797 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacac 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 19500788 - 19500858
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||| ||||||||||| ||||||| | | || |||||  |||||||||||||||||||||||    
T  19500788 tatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacac 19500858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 35157926 - 35158008
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||| || |||| | |||||| || ||||  |||| |||||||||| ||||||||||| |||||||||||    
T  35157926 tatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacac 35158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 715546 - 715603
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 752872 - 752929
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 36635448 - 36635384
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||| | |||| ||||||||||| ||||| ||| ||||||||||| |||||    
T  36635448 tatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac 36635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 12797282 - 12797361
Alignment:
Q  218 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| ||| |||| |||| || | |||||| |||||||||| || ||||||||||||||||||| | |||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacac 12797361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc 268  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 29205586 - 29205527
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 274  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |||| |||||||||||    
T  29205586 tatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 53381531 - 53381602
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 285  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| || ||| ||| |||||||||||||||||    
T  53381531 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 32273462 - 32273524
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 277  Q
    |||||||||| ||||||||||||||  | ||||||||||| || || ||||||||||||||||    
T  32273462 tatgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgac 32273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 35161154 - 35161072
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||  | |||| ||| |||| || ||||| ||||||||||||||||||| | || || |||||||||||    
T  35161154 tatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacac 35161072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 54580008 - 54580046
Alignment:
Q  259 gacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacac 54580046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 14465005 - 14465070
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 279  Q
    |||||||||||||||||||||  ||| || |||||||| |||||  |||||||||||||| |||||    
T  14465005 atatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 36509074 - 36509115
Alignment:
Q  256 tcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  36509074 tcagacacgtgtcgcgtccgacgccgacacatataattacac 36509115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 18966627 - 18966567
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg 275  Q
    ||||||||||||||||||||| ||| |||||| ||||  |||| ||||||||| |||||||    
T  18966627 tatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 20950362 - 20950450
Alignment:
Q  209 tgaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||| |||||||| |||| |||||||||||| | ||||||  | ||||   ||| || ||||||| |||||||||||||||||||||||    
T  20950362 tgaatatatgaagtacgggcactccttggattatgcgtgtttctgtgttgaacatgtatcgtgtctgacaccgacacatataattacac 20950450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 4383488 - 4383449
Alignment:
Q  211 aaaatatgaagcacggacactccttggataaggcgtgtcc 250  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  4383488 aaaatatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 4672026 - 4672101
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 290  Q
    |||||||||| |||||||||||||| || | ||| || |||||  |||||| | || |||||||||||||||||||    
T  4672026 tatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatata 4672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 21945610 - 21945539
Alignment:
Q  226 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||| ||||||||  | ||||| |||| ||||| |||||||||||||||| | |||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacac 21945539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 23861370 - 23861445
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 290  Q
    ||||||||||| |||||| ||| || |||||||||   ||| |||||| ||||||| || ||||||||||||||||    
T  23861370 tatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatata 23861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 24343631 - 24343560
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 285  Q
    ||||||||||||||||||||  ||  ||||||||||| ||||| |||||| ||| ||||| |||||||||||    
T  24343631 tatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 22234820 - 22234890
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| ||||| || |||| ||  ||||||  ||||| ||||||||||||||| |||||||||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 30838335 - 30838269
Alignment:
Q  219 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||| || | |||||||||   ||||| ||||||||||| ||||||||| |||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 3064869 - 3064926
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||||||||||||||||| |||| ||||||||| | | ||| |||| |||||||||    
T  3064869 tatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 4157266 - 4157197
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||| ||||||||| | || ||| || || | ||||| |||| ||||||||||||||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 4157553 - 4157484
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||  ||||||||| | || |||||| || | ||||| |||| ||||||||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 265  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| |||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 29205533 - 29205480
Alignment:
Q  244 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||| ||||| |||| ||||||||||| |||||||||| | |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacac 29205480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 40179626 - 40179659
Alignment:
Q  264 gtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||||||||||||    
T  40179626 gtgtcgtgtccgacaccgacgcatataattacac 40179659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 5775305 - 5775341
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccc 251  Q
    |||||||||||||||||||| |||| |||||||||||    
T  5775305 tatgaagcacggacactcctcggattaggcgtgtccc 5775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 5926 - 5993
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 282  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccga 5993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 403 - 485
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||||| |||||||||||||||||||| | |||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacac 485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0152 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0083 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 45471 - 45553
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||| ||| || |||||| |||| |||| | ||||||||||||||||||||||||||||||||| | |||||||||    
T  45471 tatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacac 45553  T

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Target: scaffold0053 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 8916 - 8834
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||||| ||||||  ||| ||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||    
T  8916 tatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacac 8834  T

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Target: scaffold0003 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 241723 - 241653
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 70394 - 70314
Alignment:
Q  217 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||| |||||| | |||| |||| |||||  ||||| ||||||||||||||||||||||||||| |||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacac 70314  T

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Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 3426 - 3344
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    |||||||||||||||||||| |||| ||||||||||| |||||   |||||||| |||||||||| ||||| | |||||||||    
T  3426 tatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacac 3344  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 8719 - 8649
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||| | |||| |||||    
T  8719 tatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacac 8649  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 71854 - 71784
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||| ||||||||| |||| || |||||||| ||||| ||||||||| |||||||||||||||||    
T  71854 tatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 92941 - 92875
Alignment:
Q  214 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||| |||| |||||||||||||||||    
T  92941 atatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0512 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 4977 - 5058
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 296  Q
    |||||||||| ||||||||| |||| |||| |||| |  |||| ||||||||||||||||||||||||||| | ||||||||    
T  4977 tatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 14645 - 14580
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 280  Q
    ||||||||||| ||||||||| ||| ||||||||| | ||||| ||||||||||||||||||||||    
T  14645 tatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 8565 - 8635
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||||| | || |||||||| || ||||| ||||||| |||||||||| ||||||||    
T  8565 tatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0793 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 4822 - 4879
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 272  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 53303 - 53239
Alignment:
Q  221 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||| ||||||| |  |||||||| ||||| |||||||||| ||||||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 3779 - 3849
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||| |||||||||| |||| ||||||||| |  |||| |||| ||||||||||||||||| ||||    
T  3779 tatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 3057 - 2987
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    |||| ||||||||||||||| |||| |||||||| || |||||  |||||||||||||| || ||||||||    
T  3057 tatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 9678 - 9747
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||||||||||||||| |||| |  ||||||||  ||||||||| |||||||||| |||||| ||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacac 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 15089 - 15045
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcag 259  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  15089 tatgaagcacaaacactcctcggataaggcgtgtccccgtgtcag 15045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 1733 - 1683
Alignment:
Q  244 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 294  Q
    |||||||  ||||| |||| |||||||||||||||||||||| ||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 13542 - 13472
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||||| |||||||||||| |||| ||| || ||||  ||||  | ||||||||||||||||||||||||    
T  13542 tatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 90961 - 90879
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 297  Q
    ||||||||||  |||||| |||||| ||||||||    ||||| ||||||||| ||||| |||| ||||| ||||||||||||    
T  90961 tatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacac 90879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 24154 - 24083
Alignment:
Q  215 tatgaagcacggacactccttggataaggcgtgtccccgtgtc--agacacgtgtcgtgtccgacaccgacac 285  Q
    |||||||||||||||||| | |||| |||||||| || |||||  | |||||||| |||||||||||||||||    
T  24154 tatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacac 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  216 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 285  Q
    ||||| ||||||||||||| |||| |||||||||   || ||  |||||||||||||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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