View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19045_low_52 (Length: 222)

Name: NF19045_low_52
Description: NF19045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19045_low_52
NF19045_low_52
[»] chr3 (117 HSPs)
chr3 (1-141)||(6126498-6126638)
chr3 (3-134)||(41309046-41309176)
chr3 (1-143)||(108475-108615)
chr3 (1-141)||(43169642-43169780)
chr3 (11-148)||(44365172-44365309)
chr3 (1-136)||(31249214-31249349)
chr3 (1-140)||(46003749-46003889)
chr3 (53-143)||(51650450-51650542)
chr3 (3-142)||(32687846-32687985)
chr3 (3-141)||(36318168-36318307)
chr3 (3-142)||(46473174-46473312)
chr3 (1-147)||(51464148-51464299)
chr3 (3-140)||(29705949-29706085)
chr3 (1-140)||(32457642-32457782)
chr3 (7-140)||(5398966-5399098)
chr3 (1-140)||(37302963-37303101)
chr3 (1-139)||(28269850-28269987)
chr3 (4-137)||(49130901-49131033)
chr3 (3-144)||(49196742-49196882)
chr3 (60-143)||(31997905-31997988)
chr3 (53-148)||(55344176-55344271)
chr3 (3-140)||(33007406-33007543)
chr3 (53-141)||(7231894-7231981)
chr3 (1-142)||(9027917-9028057)
chr3 (58-146)||(11173551-11173638)
chr3 (54-142)||(20380776-20380863)
chr3 (4-134)||(24537266-24537394)
chr3 (1-99)||(14207419-14207517)
chr3 (1-99)||(14215167-14215265)
chr3 (7-141)||(41111960-41112093)
chr3 (1-134)||(36869731-36869864)
chr3 (1-142)||(37303427-37303567)
chr3 (1-158)||(51406239-51406396)
chr3 (1-141)||(7293987-7294126)
chr3 (1-140)||(48649624-48649763)
chr3 (1-141)||(51672907-51673046)
chr3 (1-100)||(39604174-39604273)
chr3 (61-142)||(3730955-3731036)
chr3 (1-98)||(44096500-44096598)
chr3 (56-140)||(19418049-19418132)
chr3 (1-84)||(50745593-50745676)
chr3 (3-101)||(32536787-32536884)
chr3 (1-131)||(37215129-37215258)
chr3 (1-141)||(41877497-41877638)
chr3 (53-137)||(44695107-44695191)
chr3 (53-101)||(5188332-5188380)
chr3 (1-101)||(35554044-35554142)
chr3 (1-141)||(47849716-47849853)
chr3 (1-101)||(8066399-8066498)
chr3 (53-140)||(28300535-28300621)
chr3 (1-140)||(35272071-35272210)
chr3 (53-140)||(41957609-41957695)
chr3 (1-84)||(29057692-29057775)
chr3 (1-84)||(35368655-35368738)
chr3 (2-85)||(51385383-51385466)
chr3 (1-143)||(21481808-21481949)
chr3 (54-142)||(25828772-25828857)
chr3 (53-145)||(42475861-42475952)
chr3 (1-137)||(44127083-44127219)
chr3 (1-85)||(1901869-1901953)
chr3 (1-85)||(1911315-1911399)
chr3 (1-101)||(26279928-26280027)
chr3 (53-144)||(36799494-36799585)
chr3 (3-143)||(39540281-39540420)
chr3 (1-140)||(20893131-20893269)
chr3 (1-144)||(25959427-25959569)
chr3 (53-134)||(27198048-27198129)
chr3 (1-109)||(32717508-32717618)
chr3 (1-144)||(52727333-52727475)
chr3 (3-143)||(18169203-18169341)
chr3 (3-144)||(30839503-30839643)
chr3 (1-134)||(40785593-40785726)
chr3 (53-140)||(3483215-3483301)
chr3 (1-44)||(11404944-11404987)
chr3 (1-84)||(29846835-29846918)
chr3 (53-134)||(35376445-35376526)
chr3 (1-142)||(2935397-2935538)
chr3 (1-143)||(22153908-22154049)
chr3 (1-38)||(43220131-43220168)
chr3 (1-79)||(43900706-43900784)
chr3 (3-44)||(51032608-51032649)
chr3 (53-134)||(52453986-52454067)
chr3 (4-44)||(1402697-1402737)
chr3 (1-78)||(1834550-1834627)
chr3 (1-134)||(8254071-8254204)
chr3 (3-39)||(8627903-8627939)
chr3 (53-105)||(35756076-35756128)
chr3 (1-37)||(36442260-36442296)
chr3 (4-44)||(37585478-37585518)
chr3 (1-134)||(41877732-41877865)
chr3 (1-37)||(47988476-47988512)
chr3 (1-37)||(47997763-47997799)
chr3 (1-37)||(48007050-48007086)
chr3 (1-44)||(30664547-30664590)
chr3 (7-83)||(44689853-44689929)
chr3 (1-44)||(48490497-48490540)
chr3 (53-100)||(49457661-49457708)
chr3 (1-44)||(52431184-52431227)
chr3 (1-39)||(3484803-3484841)
chr3 (7-98)||(21217351-21217441)
chr3 (1-39)||(23585159-23585197)
chr3 (1-39)||(23599982-23600020)
chr3 (1-39)||(41369641-41369679)
chr3 (1-39)||(49361824-49361862)
chr3 (3-44)||(31017378-31017419)
chr3 (7-85)||(33971933-33972011)
chr3 (53-134)||(37035712-37035793)
chr3 (53-134)||(40478181-40478262)
chr3 (53-94)||(41717359-41717399)
chr3 (53-90)||(43409303-43409340)
chr3 (53-98)||(44383043-44383087)
chr3 (58-143)||(46092845-46092929)
chr3 (3-44)||(48205091-48205132)
chr3 (58-134)||(20216049-20216125)
chr3 (53-85)||(31326804-31326836)
chr3 (4-44)||(32151935-32151975)
chr3 (53-101)||(55195443-55195490)
[»] chr4 (132 HSPs)
chr4 (1-149)||(36792376-36792524)
chr4 (1-140)||(6953276-6953415)
chr4 (3-140)||(1580171-1580308)
chr4 (1-144)||(39241187-39241328)
chr4 (6-141)||(22257084-22257218)
chr4 (1-142)||(31240692-31240833)
chr4 (1-141)||(52392114-52392252)
chr4 (1-137)||(41952872-41953008)
chr4 (3-144)||(42915104-42915244)
chr4 (1-144)||(48326585-48326725)
chr4 (1-141)||(31275190-31275329)
chr4 (1-143)||(51039003-51039143)
chr4 (4-143)||(55927031-55927169)
chr4 (3-144)||(36413212-36413351)
chr4 (1-141)||(30778152-30778291)
chr4 (1-141)||(51389360-51389499)
chr4 (1-140)||(54036419-54036556)
chr4 (1-140)||(5234360-5234498)
chr4 (1-140)||(28480427-28480565)
chr4 (1-140)||(28481301-28481439)
chr4 (1-140)||(28482176-28482314)
chr4 (1-142)||(4896387-4896527)
chr4 (53-141)||(48099906-48099993)
chr4 (1-140)||(3286862-3287000)
chr4 (4-142)||(24772718-24772855)
chr4 (1-142)||(46173583-46173721)
chr4 (4-101)||(36512889-36512986)
chr4 (1-141)||(10994041-10994179)
chr4 (67-142)||(48372112-48372187)
chr4 (5-140)||(15596444-15596578)
chr4 (53-143)||(31658015-31658104)
chr4 (1-144)||(47998638-47998779)
chr4 (15-144)||(36408089-36408216)
chr4 (56-139)||(9567580-9567662)
chr4 (1-140)||(38160661-38160800)
chr4 (1-101)||(49194927-49195027)
chr4 (3-106)||(9162112-9162215)
chr4 (1-140)||(38844379-38844517)
chr4 (1-140)||(38952733-38952871)
chr4 (1-139)||(29384087-29384224)
chr4 (1-142)||(36444282-36444422)
chr4 (1-142)||(25523083-25523225)
chr4 (59-142)||(43168603-43168685)
chr4 (1-99)||(46794432-46794528)
chr4 (1-140)||(53583017-53583155)
chr4 (4-142)||(11063976-11064113)
chr4 (1-141)||(30973630-30973766)
chr4 (3-139)||(34116429-34116565)
chr4 (4-140)||(16004216-16004350)
chr4 (1-101)||(24337283-24337383)
chr4 (1-85)||(29577379-29577463)
chr4 (53-136)||(51318797-51318879)
chr4 (53-144)||(51717169-51717259)
chr4 (92-140)||(41951670-41951718)
chr4 (1-97)||(1031799-1031895)
chr4 (1-137)||(17363274-17363409)
chr4 (1-105)||(46844164-46844268)
chr4 (53-141)||(53091114-53091205)
chr4 (76-142)||(1033267-1033332)
chr4 (1-140)||(40409055-40409193)
chr4 (1-83)||(44165953-44166034)
chr4 (1-83)||(45277026-45277108)
chr4 (1-99)||(46911942-46912040)
chr4 (9-142)||(525775-525907)
chr4 (3-39)||(23347821-23347857)
chr4 (53-101)||(34974549-34974597)
chr4 (1-44)||(4577601-4577644)
chr4 (4-84)||(4878014-4878094)
chr4 (1-44)||(9472497-9472540)
chr4 (1-143)||(18874809-18874949)
chr4 (1-44)||(39881014-39881057)
chr4 (64-138)||(47134729-47134804)
chr4 (59-140)||(2613505-2613586)
chr4 (53-139)||(5123480-5123565)
chr4 (1-84)||(22893912-22893995)
chr4 (1-84)||(22945580-22945663)
chr4 (1-136)||(23690275-23690409)
chr4 (3-98)||(39844188-39844283)
chr4 (1-134)||(28676049-28676179)
chr4 (53-141)||(32901425-32901513)
chr4 (53-134)||(33860440-33860521)
chr4 (4-98)||(34616397-34616490)
chr4 (4-141)||(36364672-36364809)
chr4 (3-44)||(40755967-40756008)
chr4 (95-140)||(42169391-42169436)
chr4 (7-44)||(42169708-42169745)
chr4 (53-90)||(52891792-52891829)
chr4 (3-44)||(55996468-55996509)
chr4 (1-38)||(56379436-56379473)
chr4 (53-136)||(940161-940245)
chr4 (4-44)||(6126900-6126940)
chr4 (3-39)||(9095983-9096019)
chr4 (4-44)||(32294744-32294784)
chr4 (53-140)||(41609560-41609647)
chr4 (3-144)||(42510809-42510950)
chr4 (4-44)||(46799803-46799843)
chr4 (1-85)||(1987656-1987740)
chr4 (1-44)||(4511858-4511901)
chr4 (1-44)||(7161509-7161552)
chr4 (4-39)||(21766594-21766629)
chr4 (7-79)||(36488418-36488490)
chr4 (1-85)||(48650199-48650283)
chr4 (1-85)||(54803273-54803355)
chr4 (1-39)||(1688417-1688455)
chr4 (4-79)||(3664709-3664784)
chr4 (53-143)||(13267364-13267453)
chr4 (1-39)||(34259859-34259897)
chr4 (1-39)||(35332750-35332788)
chr4 (53-99)||(41119455-41119501)
chr4 (1-39)||(46912788-46912826)
chr4 (53-87)||(50258458-50258492)
chr4 (4-38)||(50291329-50291363)
chr4 (1-39)||(52224137-52224175)
chr4 (1-39)||(53357066-53357104)
chr4 (3-44)||(17805498-17805539)
chr4 (2-39)||(22920260-22920297)
chr4 (2-39)||(22971502-22971539)
chr4 (1-38)||(36081843-36081880)
chr4 (53-106)||(41495109-41495162)
chr4 (4-44)||(8614223-8614263)
chr4 (53-85)||(12638920-12638952)
chr4 (53-141)||(20632535-20632623)
chr4 (53-105)||(24019894-24019946)
chr4 (53-140)||(30042228-30042315)
chr4 (53-85)||(32621723-32621755)
chr4 (53-101)||(35580206-35580254)
chr4 (4-44)||(36110181-36110221)
chr4 (53-101)||(36122981-36123029)
chr4 (53-105)||(36728545-36728597)
chr4 (53-89)||(45779230-45779266)
chr4 (53-85)||(46567025-46567057)
chr4 (53-105)||(56025352-56025404)
[»] chr1 (118 HSPs)
chr1 (1-145)||(48872835-48872978)
chr1 (3-142)||(15061891-15062030)
chr1 (4-140)||(40610276-40610411)
chr1 (1-136)||(45272050-45272187)
chr1 (1-141)||(49425781-49425919)
chr1 (1-141)||(31703368-31703505)
chr1 (3-142)||(28253061-28253199)
chr1 (1-141)||(8391227-8391365)
chr1 (4-140)||(31290097-31290232)
chr1 (1-141)||(39010858-39010997)
chr1 (56-140)||(31480023-31480107)
chr1 (1-140)||(36690461-36690599)
chr1 (1-140)||(36706562-36706700)
chr1 (53-141)||(5304718-5304804)
chr1 (7-141)||(46948029-46948162)
chr1 (1-146)||(52020307-52020451)
chr1 (1-137)||(50141827-50141962)
chr1 (54-136)||(7503562-7503644)
chr1 (53-141)||(30631733-30631820)
chr1 (1-143)||(49453524-49453662)
chr1 (1-144)||(22389411-22389552)
chr1 (1-140)||(28703013-28703152)
chr1 (1-139)||(35846209-35846346)
chr1 (53-142)||(50659079-50659167)
chr1 (1-132)||(30439294-30439422)
chr1 (3-118)||(37690464-37690575)
chr1 (1-144)||(37843320-37843459)
chr1 (53-140)||(2362466-2362551)
chr1 (3-142)||(31436866-31437002)
chr1 (1-140)||(33675944-33676083)
chr1 (56-130)||(36418178-36418251)
chr1 (1-143)||(366701-366842)
chr1 (53-134)||(5367936-5368016)
chr1 (1-118)||(5477074-5477190)
chr1 (3-142)||(18959050-18959189)
chr1 (1-134)||(23554795-23554928)
chr1 (1-143)||(1615080-1615222)
chr1 (1-140)||(4637969-4638107)
chr1 (53-139)||(51703002-51703086)
chr1 (15-101)||(10384586-10384672)
chr1 (1-137)||(25302536-25302670)
chr1 (1-142)||(34187308-34187448)
chr1 (1-134)||(40595949-40596081)
chr1 (53-143)||(14002627-14002717)
chr1 (3-134)||(32821681-32821811)
chr1 (2-142)||(45740431-45740570)
chr1 (1-134)||(25061777-25061909)
chr1 (1-85)||(27352674-27352758)
chr1 (1-85)||(30530517-30530601)
chr1 (1-144)||(36930641-36930781)
chr1 (7-83)||(45042311-45042387)
chr1 (3-151)||(48325656-48325803)
chr1 (63-141)||(51571534-51571609)
chr1 (53-134)||(16987543-16987624)
chr1 (1-143)||(20288225-20288366)
chr1 (53-134)||(35043614-35043695)
chr1 (3-85)||(37947163-37947245)
chr1 (53-134)||(43640881-43640962)
chr1 (4-85)||(17167896-17167977)
chr1 (4-85)||(25098731-25098812)
chr1 (3-120)||(46003514-46003628)
chr1 (54-140)||(7645443-7645526)
chr1 (1-44)||(11121525-11121568)
chr1 (53-134)||(21255679-21255760)
chr1 (53-134)||(32966363-32966444)
chr1 (1-100)||(34941848-34941947)
chr1 (1-38)||(31480109-31480146)
chr1 (1-106)||(38913631-38913737)
chr1 (3-44)||(40118699-40118740)
chr1 (53-142)||(42829195-42829283)
chr1 (3-85)||(43105151-43105233)
chr1 (1-134)||(51168662-51168795)
chr1 (53-101)||(16836041-16836089)
chr1 (4-44)||(29638762-29638802)
chr1 (53-141)||(42843231-42843319)
chr1 (53-148)||(48872475-48872569)
chr1 (4-44)||(48962033-48962073)
chr1 (4-39)||(5574248-5574283)
chr1 (1-85)||(5959432-5959516)
chr1 (4-39)||(12990458-12990493)
chr1 (1-44)||(18541035-18541078)
chr1 (4-39)||(29094735-29094770)
chr1 (1-85)||(35030705-35030789)
chr1 (53-140)||(37516008-37516093)
chr1 (1-44)||(48256951-48256994)
chr1 (1-140)||(50226768-50226906)
chr1 (1-44)||(50460696-50460739)
chr1 (7-94)||(4604579-4604665)
chr1 (1-39)||(21728223-21728261)
chr1 (1-39)||(30196758-30196796)
chr1 (1-39)||(34157563-34157601)
chr1 (1-39)||(39815390-39815428)
chr1 (53-134)||(44730740-44730820)
chr1 (53-134)||(47059784-47059865)
chr1 (4-38)||(48390067-48390101)
chr1 (7-94)||(50527992-50528078)
chr1 (7-44)||(1788328-1788365)
chr1 (53-134)||(5383855-5383936)
chr1 (3-44)||(8464497-8464538)
chr1 (53-134)||(11460890-11460970)
chr1 (1-141)||(14247708-14247845)
chr1 (53-142)||(31427844-31427932)
chr1 (3-40)||(32196684-32196721)
chr1 (3-36)||(44672022-44672055)
chr1 (53-98)||(46907081-46907125)
chr1 (3-44)||(48689602-48689643)
chr1 (1-38)||(49596279-49596316)
chr1 (53-98)||(50061906-50061951)
chr1 (53-118)||(50436241-50436304)
chr1 (4-44)||(12972688-12972728)
chr1 (102-142)||(28716287-28716327)
chr1 (53-93)||(29264099-29264139)
chr1 (4-44)||(30414911-30414951)
chr1 (54-106)||(31493976-31494028)
chr1 (53-85)||(43612025-43612057)
chr1 (53-85)||(48028622-48028654)
chr1 (53-85)||(51339643-51339675)
chr1 (3-39)||(52233210-52233246)
[»] chr8 (103 HSPs)
chr8 (3-144)||(34473995-34474137)
chr8 (1-140)||(21648819-21648958)
chr8 (1-143)||(32174998-32175141)
chr8 (1-148)||(45101440-45101586)
chr8 (1-142)||(30925541-30925681)
chr8 (1-142)||(42543367-42543506)
chr8 (1-141)||(11879377-11879517)
chr8 (1-141)||(11896793-11896933)
chr8 (7-141)||(28927731-28927864)
chr8 (53-140)||(37101574-37101661)
chr8 (1-140)||(3650157-3650296)
chr8 (3-141)||(14029130-14029268)
chr8 (1-137)||(28570300-28570434)
chr8 (1-137)||(28577893-28578027)
chr8 (1-136)||(41406749-41406883)
chr8 (1-143)||(23258076-23258217)
chr8 (3-140)||(7678778-7678914)
chr8 (1-134)||(38576453-38576586)
chr8 (3-144)||(42768006-42768147)
chr8 (1-140)||(40102067-40102205)
chr8 (1-144)||(5502404-5502548)
chr8 (54-139)||(20473876-20473960)
chr8 (1-101)||(426145-426245)
chr8 (4-144)||(41344554-41344693)
chr8 (1-142)||(42012475-42012617)
chr8 (1-143)||(44103809-44103951)
chr8 (3-136)||(9963731-9963864)
chr8 (7-141)||(21273598-21273731)
chr8 (1-98)||(28473475-28473572)
chr8 (1-139)||(7325759-7325895)
chr8 (53-142)||(40413250-40413338)
chr8 (3-131)||(22767178-22767303)
chr8 (7-142)||(3988955-3989089)
chr8 (3-130)||(16011816-16011942)
chr8 (1-143)||(295590-295731)
chr8 (1-141)||(24946046-24946182)
chr8 (53-141)||(11223747-11223834)
chr8 (53-137)||(44672125-44672208)
chr8 (1-101)||(21418519-21418619)
chr8 (1-141)||(37524316-37524455)
chr8 (1-84)||(6243078-6243161)
chr8 (1-84)||(22836083-22836166)
chr8 (53-138)||(42689881-42689963)
chr8 (4-101)||(26871093-26871188)
chr8 (53-137)||(38128418-38128501)
chr8 (63-146)||(43290754-43290837)
chr8 (1-140)||(9046960-9047097)
chr8 (1-84)||(37471687-37471770)
chr8 (1-84)||(43590738-43590821)
chr8 (53-134)||(38844685-38844766)
chr8 (3-101)||(42047381-42047479)
chr8 (53-141)||(1179472-1179559)
chr8 (1-134)||(6004988-6005120)
chr8 (1-101)||(26507830-26507931)
chr8 (53-141)||(39719129-39719217)
chr8 (53-140)||(5359434-5359520)
chr8 (3-101)||(9738620-9738718)
chr8 (1-79)||(42716364-42716442)
chr8 (53-137)||(24503013-24503096)
chr8 (1-101)||(27836224-27836324)
chr8 (1-145)||(29910096-29910239)
chr8 (53-144)||(42941572-42941662)
chr8 (53-143)||(154386-154475)
chr8 (1-39)||(9550396-9550434)
chr8 (1-141)||(41703363-41703499)
chr8 (53-99)||(42996558-42996604)
chr8 (3-146)||(43587687-43587830)
chr8 (53-98)||(896003-896048)
chr8 (59-140)||(3206351-3206432)
chr8 (1-38)||(7279916-7279953)
chr8 (53-134)||(38504266-38504347)
chr8 (4-44)||(4148639-4148679)
chr8 (53-141)||(7129629-7129716)
chr8 (4-44)||(9985662-9985702)
chr8 (4-44)||(34838254-34838294)
chr8 (4-44)||(37294641-37294681)
chr8 (1-44)||(13924055-13924098)
chr8 (1-85)||(14233587-14233671)
chr8 (4-84)||(23709023-23709103)
chr8 (1-44)||(27300390-27300433)
chr8 (1-44)||(27630941-27630984)
chr8 (1-105)||(30578298-30578402)
chr8 (1-44)||(35818981-35819024)
chr8 (1-44)||(37210033-37210076)
chr8 (59-134)||(43602317-43602392)
chr8 (4-39)||(43605642-43605677)
chr8 (1-39)||(1179438-1179476)
chr8 (53-143)||(9895102-9895192)
chr8 (1-39)||(32777929-32777967)
chr8 (53-134)||(33817253-33817334)
chr8 (1-39)||(38174222-38174260)
chr8 (3-44)||(11180354-11180395)
chr8 (1-38)||(23265344-23265381)
chr8 (53-85)||(1796579-1796611)
chr8 (63-143)||(11089683-11089763)
chr8 (4-44)||(18550026-18550066)
chr8 (4-44)||(20995042-20995082)
chr8 (54-106)||(22852761-22852813)
chr8 (4-44)||(25430693-25430733)
chr8 (3-39)||(26294235-26294271)
chr8 (3-39)||(26307492-26307528)
chr8 (3-39)||(34494627-34494663)
chr8 (3-39)||(44672208-44672244)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-140)||(6861-6999)
[»] chr6 (53 HSPs)
chr6 (1-144)||(9954592-9954735)
chr6 (1-140)||(32853033-32853171)
chr6 (1-142)||(28548907-28549048)
chr6 (3-143)||(32253826-32253966)
chr6 (1-101)||(29383601-29383701)
chr6 (4-144)||(16336955-16337094)
chr6 (1-143)||(30906549-30906690)
chr6 (53-151)||(25166723-25166818)
chr6 (3-144)||(34021057-34021197)
chr6 (3-142)||(24437490-24437628)
chr6 (1-143)||(1897730-1897871)
chr6 (1-142)||(31517067-31517207)
chr6 (3-99)||(2163737-2163833)
chr6 (3-99)||(2175370-2175466)
chr6 (63-139)||(24752337-24752412)
chr6 (53-141)||(26378273-26378360)
chr6 (1-144)||(19713038-19713181)
chr6 (1-101)||(31480763-31480861)
chr6 (53-143)||(2582758-2582847)
chr6 (1-142)||(22422194-22422335)
chr6 (53-141)||(22491917-22492004)
chr6 (3-101)||(32457179-32457277)
chr6 (1-84)||(9395281-9395364)
chr6 (1-143)||(7693359-7693500)
chr6 (7-142)||(10521176-10521307)
chr6 (53-133)||(1688268-1688348)
chr6 (1-141)||(11785399-11785541)
chr6 (5-85)||(12151800-12151880)
chr6 (1-136)||(3179896-3180030)
chr6 (1-39)||(8395386-8395424)
chr6 (1-39)||(21506380-21506418)
chr6 (1-148)||(23633206-23633350)
chr6 (53-90)||(10628360-10628397)
chr6 (53-141)||(11017478-11017566)
chr6 (53-144)||(1803965-1804056)
chr6 (1-44)||(15098782-15098825)
chr6 (1-44)||(19789060-19789103)
chr6 (1-44)||(25561924-25561967)
chr6 (1-105)||(25924787-25924891)
chr6 (1-44)||(26101438-26101481)
chr6 (1-44)||(30253297-30253340)
chr6 (1-140)||(32149533-32149670)
chr6 (1-39)||(1196091-1196129)
chr6 (102-144)||(2241711-2241753)
chr6 (53-134)||(15328585-15328666)
chr6 (53-134)||(15364755-15364836)
chr6 (115-144)||(25554390-25554419)
chr6 (7-44)||(27790219-27790256)
chr6 (56-140)||(6435135-6435219)
chr6 (53-85)||(16533203-16533235)
chr6 (53-105)||(28965763-28965815)
chr6 (1-37)||(32135422-32135458)
chr6 (69-137)||(33720123-33720190)
[»] chr7 (97 HSPs)
chr7 (1-140)||(40842449-40842589)
chr7 (1-136)||(19426624-19426758)
chr7 (3-137)||(47424877-47425010)
chr7 (1-143)||(7807099-7807240)
chr7 (1-141)||(22330519-22330658)
chr7 (1-142)||(37351877-37352017)
chr7 (1-128)||(12102610-12102736)
chr7 (3-142)||(34348914-34349052)
chr7 (54-142)||(43260086-43260175)
chr7 (1-140)||(2790221-2790360)
chr7 (1-141)||(33684724-33684863)
chr7 (1-140)||(25887627-25887765)
chr7 (58-140)||(40717127-40717209)
chr7 (1-144)||(46651716-46651858)
chr7 (53-135)||(28596973-28597057)
chr7 (1-144)||(32154435-32154574)
chr7 (1-142)||(45607068-45607208)
chr7 (1-139)||(36990085-36990221)
chr7 (1-144)||(48866815-48866957)
chr7 (1-142)||(155868-156008)
chr7 (3-140)||(5978625-5978761)
chr7 (13-134)||(7390669-7390789)
chr7 (2-141)||(27778113-27778245)
chr7 (53-148)||(47193023-47193116)
chr7 (1-140)||(5378671-5378809)
chr7 (1-144)||(8792485-8792624)
chr7 (53-140)||(44894363-44894449)
chr7 (53-139)||(4182502-4182588)
chr7 (1-140)||(21752702-21752840)
chr7 (59-140)||(12141986-12142066)
chr7 (1-139)||(21839023-21839160)
chr7 (1-91)||(41254820-41254910)
chr7 (1-134)||(37392087-37392220)
chr7 (3-142)||(43657061-43657186)
chr7 (54-140)||(10591250-10591334)
chr7 (1-135)||(7077647-7077780)
chr7 (1-155)||(19510231-19510384)
chr7 (4-84)||(22331155-22331235)
chr7 (1-141)||(30180551-30180690)
chr7 (7-134)||(46148216-46148343)
chr7 (53-141)||(6353824-6353912)
chr7 (1-83)||(17039201-17039283)
chr7 (8-90)||(31982108-31982190)
chr7 (56-140)||(21858846-21858929)
chr7 (53-109)||(35165142-35165196)
chr7 (3-96)||(42204658-42204751)
chr7 (3-100)||(43213354-43213451)
chr7 (1-101)||(39875736-39875836)
chr7 (53-138)||(2414159-2414241)
chr7 (3-134)||(4678109-4678240)
chr7 (53-134)||(28110051-28110132)
chr7 (54-99)||(10656729-10656774)
chr7 (3-85)||(18157128-18157210)
chr7 (7-93)||(30862686-30862772)
chr7 (1-143)||(43079515-43079659)
chr7 (53-101)||(28862024-28862072)
chr7 (53-140)||(37856070-37856156)
chr7 (1-44)||(40108168-40108211)
chr7 (53-139)||(45432040-45432125)
chr7 (69-143)||(43445519-43445592)
chr7 (53-98)||(43025903-43025948)
chr7 (3-44)||(49142501-49142542)
chr7 (53-141)||(10014842-10014930)
chr7 (4-44)||(30447407-30447447)
chr7 (3-39)||(33465028-33465064)
chr7 (4-44)||(41910169-41910209)
chr7 (53-141)||(41966424-41966511)
chr7 (4-44)||(47945030-47945070)
chr7 (4-44)||(47950460-47950500)
chr7 (1-44)||(6822517-6822560)
chr7 (1-44)||(24380705-24380748)
chr7 (1-44)||(27866521-27866564)
chr7 (4-39)||(41538529-41538564)
chr7 (1-44)||(41666956-41666999)
chr7 (1-44)||(45335906-45335949)
chr7 (4-39)||(48639372-48639407)
chr7 (4-38)||(1709331-1709365)
chr7 (53-83)||(6655562-6655592)
chr7 (1-39)||(7295495-7295533)
chr7 (1-39)||(28081771-28081809)
chr7 (1-39)||(29923715-29923753)
chr7 (1-39)||(36186865-36186903)
chr7 (1-39)||(36920847-36920885)
chr7 (53-119)||(37325728-37325794)
chr7 (1-35)||(39415462-39415496)
chr7 (1-39)||(41985089-41985127)
chr7 (56-136)||(5198652-5198732)
chr7 (7-44)||(23034297-23034334)
chr7 (53-98)||(46022406-46022450)
chr7 (3-39)||(7990125-7990161)
chr7 (1-33)||(8459647-8459679)
chr7 (3-39)||(26153691-26153727)
chr7 (56-140)||(26153759-26153842)
chr7 (53-85)||(27688733-27688765)
chr7 (53-85)||(30941273-30941305)
chr7 (4-44)||(41030330-41030370)
chr7 (3-39)||(44596117-44596153)
[»] chr5 (93 HSPs)
chr5 (1-142)||(5130264-5130405)
chr5 (3-143)||(13613849-13613989)
chr5 (1-140)||(12661835-12661974)
chr5 (1-136)||(14206433-14206568)
chr5 (1-140)||(10232543-10232682)
chr5 (1-140)||(40223674-40223812)
chr5 (1-140)||(16202764-16202903)
chr5 (1-136)||(31284287-31284421)
chr5 (1-139)||(3634538-3634675)
chr5 (1-135)||(34381056-34381189)
chr5 (1-140)||(3141539-3141678)
chr5 (1-139)||(125136-125273)
chr5 (1-142)||(6515326-6515465)
chr5 (58-143)||(21749459-21749544)
chr5 (1-140)||(39595316-39595456)
chr5 (53-144)||(2117525-2117615)
chr5 (7-142)||(20719902-20720036)
chr5 (1-141)||(11306742-11306879)
chr5 (1-142)||(11767877-11768017)
chr5 (3-140)||(24431507-24431643)
chr5 (53-145)||(33243625-33243716)
chr5 (7-143)||(4434521-4434656)
chr5 (1-101)||(19376059-19376159)
chr5 (53-143)||(33567125-33567214)
chr5 (1-99)||(42909763-42909861)
chr5 (1-145)||(12718264-12718407)
chr5 (1-145)||(12779490-12779633)
chr5 (5-144)||(19127172-19127310)
chr5 (1-142)||(29227750-29227890)
chr5 (1-132)||(41460160-41460291)
chr5 (3-137)||(28811474-28811607)
chr5 (53-148)||(7927447-7927542)
chr5 (1-141)||(14323856-14323995)
chr5 (1-141)||(27392590-27392729)
chr5 (1-101)||(33910015-33910115)
chr5 (1-140)||(11666223-11666361)
chr5 (1-100)||(17063909-17064008)
chr5 (3-140)||(9714024-9714161)
chr5 (1-141)||(40566104-40566244)
chr5 (1-143)||(91259-91400)
chr5 (4-101)||(34767344-34767439)
chr5 (1-141)||(26660299-26660438)
chr5 (1-141)||(26931891-26932030)
chr5 (1-149)||(30574256-30574404)
chr5 (53-140)||(39458737-39458823)
chr5 (1-39)||(39458701-39458739)
chr5 (1-99)||(471858-471956)
chr5 (87-144)||(9403643-9403699)
chr5 (53-142)||(14914466-14914554)
chr5 (1-38)||(18449305-18449342)
chr5 (1-94)||(11880922-11881014)
chr5 (1-85)||(9636101-9636185)
chr5 (1-85)||(13734303-13734387)
chr5 (1-44)||(20985513-20985556)
chr5 (53-144)||(29402278-29402368)
chr5 (53-133)||(43482459-43482540)
chr5 (1-39)||(7080574-7080612)
chr5 (59-140)||(15531778-15531860)
chr5 (1-39)||(33567212-33567250)
chr5 (53-134)||(4834924-4835004)
chr5 (1-99)||(8087843-8087941)
chr5 (3-44)||(15531945-15531986)
chr5 (9-134)||(3960063-3960188)
chr5 (3-39)||(14073097-14073133)
chr5 (4-44)||(36899465-36899505)
chr5 (1-81)||(3031878-3031958)
chr5 (53-100)||(6865715-6865762)
chr5 (1-36)||(6964358-6964393)
chr5 (1-44)||(12203191-12203234)
chr5 (4-84)||(12891040-12891120)
chr5 (1-44)||(17574208-17574251)
chr5 (63-98)||(18449362-18449397)
chr5 (1-44)||(21023342-21023385)
chr5 (4-39)||(34693205-34693240)
chr5 (3-89)||(582808-582892)
chr5 (1-39)||(2117613-2117651)
chr5 (1-43)||(2456070-2456112)
chr5 (4-107)||(4820202-4820305)
chr5 (1-39)||(8725411-8725449)
chr5 (53-143)||(8959256-8959346)
chr5 (1-39)||(9940100-9940138)
chr5 (53-143)||(11464008-11464098)
chr5 (1-39)||(22653699-22653737)
chr5 (53-106)||(3154565-3154618)
chr5 (53-134)||(7077233-7077314)
chr5 (115-144)||(8897539-8897568)
chr5 (112-145)||(8955541-8955574)
chr5 (54-134)||(23991328-23991408)
chr5 (3-44)||(27340915-27340956)
chr5 (1-38)||(31024995-31025032)
chr5 (53-100)||(5996761-5996809)
chr5 (4-44)||(18729273-18729313)
chr5 (4-44)||(39032588-39032628)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-143)||(27383-27525)
[»] chr2 (105 HSPs)
chr2 (1-143)||(13711105-13711246)
chr2 (1-143)||(36133018-36133159)
chr2 (3-136)||(7428475-7428606)
chr2 (6-148)||(26321578-26321719)
chr2 (7-140)||(34138925-34139059)
chr2 (53-141)||(19913880-19913968)
chr2 (1-137)||(12600092-12600227)
chr2 (53-134)||(45515494-45515574)
chr2 (3-143)||(3091787-3091926)
chr2 (4-143)||(22390199-22390337)
chr2 (1-141)||(7086012-7086151)
chr2 (1-140)||(5455342-5455480)
chr2 (1-140)||(11229210-11229348)
chr2 (1-135)||(43725249-43725382)
chr2 (53-141)||(11164264-11164351)
chr2 (1-142)||(13104523-13104663)
chr2 (1-101)||(6639399-6639499)
chr2 (4-140)||(14714033-14714168)
chr2 (1-143)||(32750042-32750183)
chr2 (53-140)||(12066005-12066095)
chr2 (53-141)||(33295975-33296062)
chr2 (1-101)||(1889191-1889291)
chr2 (1-140)||(29795480-29795618)
chr2 (1-99)||(15141506-15141604)
chr2 (53-141)||(12962482-12962569)
chr2 (53-140)||(14140228-14140314)
chr2 (4-140)||(23344878-23345013)
chr2 (1-140)||(23880139-23880277)
chr2 (1-136)||(25801704-25801840)
chr2 (1-99)||(28014000-28014098)
chr2 (54-118)||(30996809-30996873)
chr2 (9-140)||(5067531-5067660)
chr2 (1-139)||(9202406-9202543)
chr2 (1-142)||(34249624-34249765)
chr2 (11-125)||(39285907-39286020)
chr2 (53-146)||(45693350-45693443)
chr2 (1-134)||(36435725-36435857)
chr2 (1-142)||(42251807-42251947)
chr2 (1-85)||(19523344-19523428)
chr2 (59-141)||(2013173-2013254)
chr2 (1-140)||(19695581-19695718)
chr2 (58-143)||(16577568-16577652)
chr2 (1-134)||(37631261-37631394)
chr2 (3-132)||(28165175-28165304)
chr2 (61-136)||(15019036-15019111)
chr2 (53-144)||(31296728-31296818)
chr2 (53-140)||(34442209-34442295)
chr2 (53-140)||(36909732-36909818)
chr2 (53-140)||(38689005-38689092)
chr2 (4-84)||(43205140-43205220)
chr2 (1-132)||(4263760-4263891)
chr2 (1-84)||(45202076-45202159)
chr2 (1-83)||(32688489-32688571)
chr2 (53-98)||(36376781-36376826)
chr2 (3-84)||(6885424-6885505)
chr2 (53-105)||(29871278-29871330)
chr2 (53-141)||(39454135-39454222)
chr2 (1-106)||(41353419-41353524)
chr2 (1-98)||(42081081-42081178)
chr2 (8-144)||(44189878-44190011)
chr2 (1-44)||(4723610-4723653)
chr2 (1-141)||(10550346-10550486)
chr2 (1-44)||(11126508-11126551)
chr2 (1-44)||(41868353-41868396)
chr2 (53-134)||(36763414-36763495)
chr2 (4-98)||(13333312-13333405)
chr2 (53-134)||(30413626-30413707)
chr2 (3-44)||(34372893-34372934)
chr2 (1-141)||(8757588-8757728)
chr2 (4-44)||(12256948-12256988)
chr2 (4-44)||(16051372-16051412)
chr2 (3-39)||(16051406-16051442)
chr2 (4-44)||(18508125-18508165)
chr2 (1-140)||(30340037-30340177)
chr2 (53-105)||(38021452-38021504)
chr2 (4-44)||(38598333-38598373)
chr2 (3-84)||(40115561-40115642)
chr2 (53-144)||(7121458-7121548)
chr2 (1-147)||(9384419-9384565)
chr2 (1-44)||(19637273-19637316)
chr2 (1-44)||(19835866-19835909)
chr2 (69-144)||(23045273-23045347)
chr2 (5-145)||(30973874-30974014)
chr2 (1-44)||(31635794-31635837)
chr2 (53-134)||(694365-694446)
chr2 (3-85)||(5167685-5167765)
chr2 (1-39)||(17999790-17999828)
chr2 (59-132)||(18949108-18949180)
chr2 (1-39)||(42554820-42554858)
chr2 (53-134)||(1574549-1574630)
chr2 (53-106)||(3299027-3299080)
chr2 (3-44)||(22296113-22296154)
chr2 (53-98)||(25270721-25270765)
chr2 (1-38)||(28264572-28264609)
chr2 (1-38)||(40210057-40210094)
chr2 (59-140)||(42283139-42283219)
chr2 (1-38)||(42665802-42665839)
chr2 (53-85)||(15019113-15019145)
chr2 (1-33)||(23045134-23045166)
chr2 (3-39)||(24491666-24491702)
chr2 (4-44)||(26387843-26387883)
chr2 (4-44)||(28679175-28679215)
chr2 (4-44)||(38027599-38027639)
chr2 (53-85)||(40951286-40951318)
chr2 (59-142)||(44059609-44059692)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-142)||(18050-18187)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-142)||(15076-15215)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-106)||(31522-31627)
[»] scaffold0501 (1 HSPs)
scaffold0501 (4-148)||(10397-10540)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-142)||(36046-36186)
[»] scaffold0001 (1 HSPs)
scaffold0001 (53-142)||(395957-396046)
[»] scaffold0508 (1 HSPs)
scaffold0508 (3-144)||(11421-11561)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-101)||(219591-219691)
[»] scaffold0286 (1 HSPs)
scaffold0286 (3-99)||(18576-18672)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-141)||(113669-113808)
[»] scaffold0002 (2 HSPs)
scaffold0002 (4-101)||(6474-6571)
scaffold0002 (1-85)||(440762-440846)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-91)||(34452-34540)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-134)||(17019-17152)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-140)||(38925-39061)
[»] scaffold0184 (1 HSPs)
scaffold0184 (3-134)||(16489-16619)
[»] scaffold0078 (1 HSPs)
scaffold0078 (3-134)||(56225-56355)
[»] scaffold0003 (1 HSPs)
scaffold0003 (59-144)||(119935-120019)
[»] scaffold0154 (1 HSPs)
scaffold0154 (3-140)||(9737-9873)
[»] scaffold0076 (2 HSPs)
scaffold0076 (53-101)||(11288-11336)
scaffold0076 (3-39)||(11254-11290)
[»] scaffold0514 (2 HSPs)
scaffold0514 (3-134)||(1390-1521)
scaffold0514 (4-39)||(1834-1869)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-39)||(48701-48736)
[»] scaffold0576 (1 HSPs)
scaffold0576 (53-134)||(9526-9607)
[»] scaffold0193 (1 HSPs)
scaffold0193 (53-133)||(24769-24849)


Alignment Details
Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 117)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 6126498 - 6126638
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||||||||||| |    
T  6126498 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtaa 6126597  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  6126598 ccaaaagttgtatgaaatggttgttcaaatatcactactct 6126638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 41309046 - 41309176
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  41309046 tttctctctcatactcacattatcctcttattctctctcttcttttttctctctccattgtttttaaccaatgaaaagataga-aaaagaagttgtcacc 41309144  T
Q  103 aaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||| ||||||||| ||||||||||||||    
T  41309145 aaaagttgtatgaaatgattgttcaaatatca 41309176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 108475 - 108615
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  108475 actttctctctcatactcacattatcctcttattctctctcttcctttctctctctccattgtttttatccaatgaaaa-agagaaaaaa-aagttgtca 108572  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  108573 ccaaaagttgtatgaaatagttgttcaaatatcactactcttt 108615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43169780 - 43169642
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| |||||||||||||  |||        ||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  43169780 actttttctctcatactcacattattctcttattctctctattcttttttctctctccattgtttttaaccaatgaaaagagagaaaaaa--agttgtca 43169683  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  43169682 ccaaaagttgtatgaaatggttgttcaaatatcactactct 43169642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 44365309 - 44365172
Alignment:
Q  11 tcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttt 110  Q
    ||||||||||||||||||||||||||||| ||||        | || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||     
T  44365309 tcatactcacattatcctcttattctctctcttcctttttctcccttcattgtttttacccaatgaaaagagagagaaaagaagttgtcaccaaaaattg 44365210  T
Q  111 tatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    ||| ||||||||||||||||||||| ||||||||||||    
T  44365209 tataaaatggttgttcaaatatcaccactcttttaaaa 44365172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 31249349 - 31249214
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||| | |||| |||||||||    
T  31249349 actttctctctcatatttacattatcctcttattctctctcttcatttttctttctccattgtttttaaccaatgaaaagagaaaaaaaaaaagttgtca 31249250  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31249249 ccaaaagttgtatgaaatggttgttcaaatatcact 31249214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 46003749 - 46003889
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtc 99  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||   |||||||| |||||||||    
T  46003749 actttctctcccatagtcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaataagagaaaaagaagttgtc 46003848  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  46003849 accaaaagttgtatgaaatggttgttcaaatatcattactc 46003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 51650450 - 51650542
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa--gaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  51650450 ctctccattgtttttaaccaatgaaaagagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcaccactcttt 51650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 32687985 - 32687846
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||| ||||||| | |||||||| |||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  32687985 tttctttctcatatttacattatcttcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcacc 32687886  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| ||| |||| ||||||||||||||| |||||||    
T  32687885 aaaagttgtatcaaatagttgttcaaatatcattactctt 32687846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 36318307 - 36318168
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtcac 101  Q
    ||||||||||||||||| |||||||| |||||||||| ||||        || ||||||||||||||||||||||||  ||||||||| |||||||||||    
T  36318307 tttctctctcatactcatattatccttttattctctctcttcttttttctctatccattgtttttaaccaatgaaaaaggagagaaaaagaagttgtcac 36318208  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||| || |||||||||||||||||||||||| ||||||    
T  36318207 caaaaattatatgaaatggttgttcaaatatcattactct 36318168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 46473174 - 46473312
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||  |||||||||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||||||||||      
T  46473174 tttctctctcatactcacattattatcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca-t 46473272  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| ||| |||||||||||||||||||| |||||||    
T  46473273 aaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 51464299 - 51464148
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-----gt 95  Q
    ||||| ||||||||||||||||||| ||| ||||||||| ||||        ||||||||||||||||||||||||||||||||| |||| ||     ||    
T  51464299 actttatctctcatactcacattattctcgtattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaaaaaaagt 51464200  T
Q  96 tgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaa 147  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  51464199 tgtcaccaaaagttgtataaaatggttgttcaaatatcactactcttataaa 51464148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 29705949 - 29706085
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||        || |||||||||||| ||||||||||||||||| |||||||||||||| |    
T  29705949 tttctctttcatactcacattattctcttattctctctcttcatttttctctatccattgttttttaccaatgaaaagagagaaaaaagaagttgtca-c 29706047  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||| ||| |||| |||||||||||||||||||||    
T  29706048 aaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32457782 - 32457642
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc- 99  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||| ||||||||||||||||||||||| |||||||||||||     
T  32457782 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattatttttaaccaatgaaaagagagaaaaaagaagttgtca 32457683  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |  |||| || ||| |||| |||||||||||||||||||||    
T  32457682 aaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 5398966 - 5399098
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||| ||||||||||||||||||||  |||        |||||||||||||||| |||||||||| | ||| |||| |||||||||||||||    
T  5398966 tctctcatactcgcattatcctcttattctctcttttcctttttctctctccattgtttttatccaatgaaaacaaagaaaaaa-aagttgtcaccaaaa 5399064  T
Q  107 gttttatgaaatggttgttcaaatatcactactc 140  Q
    |||  |||||||||||||||||||||||||||||    
T  5399065 gttggatgaaatggttgttcaaatatcactactc 5399098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37303101 - 37302963
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||        ||||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  37303101 actttctctctcatactcacattatcctcttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaaagaaattgtca 37303002  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||| ||||||||||| ||||||||    
T  37303001 -caaaagttgtctcatatgcttgttcaaataacactactc 37302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 28269850 - 28269987
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||| ||||||||||||| ||| |||||||||||||     
T  28269850 actttctttctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagatagaaaaaagaagttgtc- 28269948  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
     |||||||| | | | ||||||||||||||| |||||||    
T  28269949 gcaaaagttgtctcatatggttgttcaaataacactact 28269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 49130901 - 49131033
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||| ||||||||||||||| ||||||||||||| ||||        ||||||||||||||| || ||||||||||||||||||||||||||||| ||    
T  49130901 ttctctttcatactcacattatactcttattctctctcttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaagttgtca-ca 49130999  T
Q  104 aaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||| || | | |||||| ||||||||||||||||    
T  49131000 aaaattgtctcaaatggatgttcaaatatcacta 49131033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 49196742 - 49196882
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| ||||||||||||| ||||        ||||||||| ||||||||||||| ||| ||| |||||| || |||||||     
T  49196742 tttctctctcatactcacattatactcttattctctctcttcatttttctctctccattatttttaaccaatggaaaaagaaagaaaaaaaattgtcac- 49196840  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||| ||||  ||||||||||||||| ||||||||    
T  49196841 aaaagttttatcaaataattgttcaaatatcacaactctttt 49196882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 31997905 - 31997988
Alignment:
Q  60 ttgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||    
T  31997905 ttgtttttaactaataaaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactcttt 31997988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 55344271 - 55344176
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    ||||| ||||||||||||||||||||||||||| || | |||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||||    
T  55344271 ctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactcttttaaaa 55344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 33007406 - 33007543
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag-agaaaagaagttgtcac 101  Q
    ||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||| | ||||||||||||||     
T  33007406 tttctctctcatactcacattattctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtca- 33007504  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| || | | | ||||||||||||||| ||||||||    
T  33007505 caaaaattgtctcatatggttgttcaaataacactactc 33007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 7231981 - 7231894
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||| |||||||| ||| |||||||||||||||||||||||||||    
T  7231981 ctctccattgtttttgaccaatgaaaagagagaaaaaataaattgtca-caaaagttgtatcaaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9027917 - 9028057
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||| | |||         ||||||||||||||| |||||| |||| ||||||||| ||||||||||    
T  9027917 actttctctctcatactcacattattctcttattctccctctttctttttctctctccattgtttttgaccaataaaaatagagagaaacgaagttgtca 9028016  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     ||||| |  ||| |||||||||||||||||||||| |||||    
T  9028017 -caaaaatcgtatcaaatggttgttcaaatatcacttctctt 9028057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 11173551 - 11173638
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaa 146  Q
    |||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||| | |||||||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatggttgttcaaatattattactcttttaa 11173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 20380863 - 20380776
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  20380863 tctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtca-caaaagttgtttaaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 24537266 - 24537394
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||| ||||||||| ||||||||||||||||||||| |||         |||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  24537266 ttctttctcatacttacattatcctcttattctctctcttactttttttctctgcattgtttttaaccaatgaaaagaaagaaaaaagaagttgtcacta 24537365  T
Q  104 aaagttttatgaaatggttgttcaaatatca 134  Q
    ||  || ||| ||||||||||||||||||||    
T  24537366 aa--ttgtataaaatggttgttcaaatatca 24537394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14207419 - 14207517
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  14207419 actttctctctcatactcacattatactcttattctctctcttctttcatctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14207517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14215167 - 14215265
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  14215167 actttctctctcatactcacattatactcttattctctctcttctttcatctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 41112093 - 41111960
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||    |||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||| |  ||||    
T  41112093 tctctcatactcacattatatctttattctctctcttcctttttccctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtta-aaaaa 41111995  T
Q  107 gttttatgaaatggttgttcaaatatcactactct 141  Q
    ||| | | |||||| ||||||||||||||||||||    
T  41111994 gttgtctcaaatggatgttcaaatatcactactct 41111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36869864 - 36869731
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| ||||||||||||||||||||| || |||||||    
T  36869864 actttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaatgaggttgtca 36869765  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
      |||  | |||  ||||||||||||||||||||    
T  36869764 tgaaagttgttagcaaatggttgttcaaatatca 36869731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 37303427 - 37303567
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||        ||||| ||||||||| | ||||||||||||||| |||| || ||||||    
T  37303427 actttctctctcatactcacattatcctcttattctccctcttcctttttctctctctattgtttttgatcaatgaaaagagagaaaaaataaattgtca 37303526  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| | | | || |||||||||||| ||||||||||    
T  37303527 -caaaagttgtctcatatagttgttcaaataacactactctt 37303567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 51406396 - 51406239
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||        ||||||||| |||||| ||||| | | || ||| ||||  ||||||||    
T  51406396 actttctctctcatactcatattattttcttattctctctcttcctttttctctctccattatttttatccaattagaggaaagaaaaaa--agttgtca 51406299  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt--ttaaaatatgtataaa 158  Q
    ||||||||| |||||||| ||||||||||||||||| |||||  | ||||||||||||||    
T  51406298 ccaaaagttatatgaaatagttgttcaaatatcacttctcttgataaaaatatgtataaa 51406239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 7294126 - 7293987
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||| ||||||| |||||||||||   ||| |||||||||||| |    
T  7294126 actttctctctcatactcacattatgtttttattctctctcttcctttttctctctccactgtttttgaccaatgaaaaataagaaaaaagaagttgt-a 7294028  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| | | |||||||||||||||||||||||||||    
T  7294027 tcaaaagttgtctaaaatggttgttcaaatatcactactct 7293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48649624 - 48649763
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnn-ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||||||||||||||| | ||||         ||||||||||||||| ||||||||||| |||||||||| ||||| ||    
T  48649624 actttctctctcatactcacattatcctcttattctccctcttcttttttcctctctccattgtttttgaccaatgaaaaaagagagaaaataagttatc 48649723  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | ||||| || | | | ||||||||||||||| ||||||||    
T  48649724 a-caaaaattatctcatatggttgttcaaataacactactc 48649763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 51672907 - 51673046
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| | |||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||  || | |||||||||||| |    
T  51672907 actttctttttcatactcacattatatttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaactgaaaaaaaagaagttgt-a 51673005  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| | | |||||||||||||||||||||||||||    
T  51673006 ccaaaagttgtctaaaatggttgttcaaatatcactactct 51673046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39604273 - 39604174
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||| |||||||||||| ||||||||||||  ||||        ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  39604273 actttctctctcttactcacattatactcttattctctttcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 39604174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 3731036 - 3730955
Alignment:
Q  61 tgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||| | | ||||||| ||| ||||||||||||||||    
T  3731036 tgtttttaaccaatgaaaagagagagaaaataaattgtcaccaaacgttgtctcaaatggtcgttaaaatatcactactctt 3730955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44096598 - 44096500
Alignment:
Q  1 actttctctctcatactcacatt-atcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||        |||||||||||||||||| ||||||||||||||||||| |||||||    
T  44096598 actttctctctcatacttacatttatcctcttattctctctcttcctttttctctctccattgtttttaacgaatgaaaagagagagaaaataagttgt 44096500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 19418132 - 19418049
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||| |||| | | |||||| |||||||||||||| ||||    
T  19418132 tccattgtttttgaccaatgaaaagagagagaaaagaagttgtca-caagagttgtctcaaatggatgttcaaatatcaccactc 19418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50745593 - 50745676
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||    
T  50745593 actttctctctcatactcacattatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 50745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 32536787 - 32536884
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||||||||||| |||||||||| || ||||        ||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  32536787 tttctctctcatactcacattatactcttattctttctcttcatttttctctctccattgtttttgatcaatgaaaagagagagaaaa-aagttgtcac 32536884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 37215258 - 37215129
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||||||| ||| |||||||||||||| || | ||||        ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  37215258 actttctgtctcatattcatattatcctcttattatccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtca 37215159  T
Q  101 ccaaaagttttatgaaatggttgttcaaata 131  Q
     |||||||| | | | |||||||||||||||    
T  37215158 -caaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 41877638 - 41877497
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtc 99  Q
    ||||| ||||||||||||||||||| |||||||| |||| ||||        ||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  41877638 actttttctctcatactcacattatactcttattttctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaaagaaattgtc 41877539  T
Q  100 accaaaagttttatgaaatgg-ttgttcaaatatcactactct 141  Q
    || | ||||| | | |||||  ||||||||||| |||||||||    
T  41877538 ac-ataagttgtctaaaatgaattgttcaaataccactactct 41877497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 44695107 - 44695191
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaag-aagttgtcaccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||||||||||||||||||||||| ||||| ||||  || || |||| ||||||| |||||||||||||||||||||||||||    
T  44695107 ctctccattgtttttaaccaatgaaaaaagagaaaaaaataaattatcac-aaaagttgtatgaaatggttgttcaaatatcacta 44695191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 5188332 - 5188380
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5188332 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcac 5188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35554142 - 35554044
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||        || |||||||||||| ||||||||||  |||||||||| |||||||||    
T  35554142 actttctctctcatactcacattatcctcttattctccctcttcctttttctctttccattgtttttgaccaatgaaa--agagagaaaataagttgtca 35554045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 47849716 - 47849853
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||  |||||||||||||| ||||||||||||| |||         ||||||||||||||| ||||||||||||||||| |||||| | |||||    
T  47849716 actttctcttacatactcacattatactcttattctctctctt--tctttttctctccattgtttttgaccaatgaaaagagagaaaaaagaggctgtca 47849813  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     ||| |||| | | |||| | ||||||||||||||||||||    
T  47849814 -caagagttgtttcaaatagatgttcaaatatcactactct 47849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8066399 - 8066498
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||| |||||||||| |||| | ||||        ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  8066399 actttctctctcatactcacactatcctcttactctccctcttcctttttctctctccattgtttttgaccaatgaaaagagaga-aaaataagttgtca 8066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 28300621 - 28300535
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| ||||||||| ||||||||||||||||| || | ||||||||| ||| |||| ||| | ||||||||||||||||||||||||    
T  28300621 ctctctattgtttttgaccaatgaaaagagagaaaataaaagttgtca-caagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35272071 - 35272210
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||| ||||||||| ||||| |||||||| |||| ||||        ||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  35272071 actttatctttcatactcatattatactcttattttctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtca 35272170  T
Q  101 ccaaaagttttatgaaatgg-ttgttcaaatatcactactc 140  Q
    | | ||||| | | |||||  ||||||||||||||||||||    
T  35272171 c-ataagttgtctaaaatgaattgttcaaatatcactactc 35272210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 41957609 - 41957695
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| |||||||||||| |||| ||||||| || ||| |||||||| | | ||||||||||| ||||||||||||||    
T  41957609 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaaattatca-caaaagttgtttaaaatggttgtttaaatatcactactc 41957695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29057692 - 29057775
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||| |||||| |||||||||||||||||||||    
T  29057692 actttctctctcatactcacattatcttcttattctctctcttcttttttctctccccattgattttaaccaatgaaaagagag 29057775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35368655 - 35368738
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||| ||||||||| ||||||||||||||||    
T  35368655 actttctctctcatactcacattatcttcttattctctctcttcctttttctctctctattgttttttaccaatgaaaagagag 35368738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 51385466 - 51385383
Alignment:
Q  2 ctttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||        ||||||||||||||| |||||||||||||||||    
T  51385466 ctttctctctcatactcacattatcttcttattatctctcttcttttttctctctccattgtttttgaccaatgaaaagagaga 51385383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21481808 - 21481949
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||         |||| ||||||||| |||||||| ||||||||  || || ||||||     
T  21481808 actttttctctcatactcacattatcttcttattctctctcttcctttttctgtctctattgtttttgaccaatgagaagagagaacaatgaggttgtc- 21481906  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| ||| ||  |||||||||||||||||| ||||||    
T  21481907 tcaaaagttgtataaataggttgttcaaatatcactcctcttt 21481949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 25828772 - 25828857
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||||||  |||||||||||| |||| | ||| ||||||||| || |||||| |||||||||||||||||||||||||    
T  25828772 tctccattgtttttaacct-tgaaaagagagaaaaaa-aggttatcaccaaaaattgtatgaa-tggttgttcaaatatcactactctt 25828857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 42475952 - 42475861
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
    |||||||||| |||| ||||||||||||||||| |||| ||||| ||| |||||||| | | | ||||||||||||||| |||||||| ||||    
T  42475952 ctctccattggttttgaccaatgaaaagagagaaaaaataagttttca-caaaagttgtcttatatggttgttcaaataacactactcattta 42475861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44127219 - 44127083
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| ||||||||||||||  ||||| |||||| |||         |||||||||||||||||||||||| |||||||| ||| || |||||||    
T  44127219 actttctctcccatactcacattatattcttactctctctcttaatttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtca 44127120  T
Q  101 ccaaaagtt-ttatgaaatggttgttcaaatatcacta 137  Q
      ||||||| |||  |||| ||||||||||||||||||    
T  44127119 -taaaagttgttagcaaatagttgttcaaatatcacta 44127083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1901953 - 1901869
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  1901953 actttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 1901869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1911399 - 1911315
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  1911399 actttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 1911315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26279928 - 26280027
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||| |||| |||| ||||        ||||||||||||||| |||||||||||||||| ||||| || ||||||    
T  26279928 actttctctctcatactcacattatactcatattatctctcttcctttttctctctccattgtttttgaccaatgaaaagagag-gaaaaaaaattgtca 26280026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 36799494 - 36799585
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||||  |||  | |||  ||||| |||||||||||||| | |||||||    
T  36799494 ctctccattgtttttgaccaatgaaaagagagaaaaatgaagttgtcatgaaacttgttagcaaatgtttgttcaaatatcattgctctttt 36799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 39540281 - 39540420
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| |||||||| |||| |||         ||||||||| ||||| ||||||||||||||||| |||| || || ||| |    
T  39540281 tttctctctcatactcacattattctcttattttctctctttctttttctctctccattttttttgaccaatgaaaagagagaaaaaataaattatca-c 39540379  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||| || | | | ||||||||||||||| ||| |||||||    
T  39540380 aaaaattatctcatatggttgttcaaataacacaactcttt 39540420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20893269 - 20893131
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| || ||||||  |||||||||||||||||||||| |||         |||| ||||||||||||||||| |||| | | |||||  |||||||||    
T  20893269 actttatccctcatatccacattatcctcttattctctctctttctttttctctcttcattgtttttaaccaataaaaaaaaa-agaaattaagttgtca 20893171  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | ||||||||||| ||||||||||||||    
T  20893170 tcaaaagttgtctcaaatggttgttaaaatatcactactc 20893131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25959569 - 25959427
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | ||| | |||| ||||        ||||||||||||||| ||||||||||||||||| ||   |||||||||    
T  25959569 actttctctctcatactcacattatatttttactatctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaagttgtca 25959470  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
      | | ||| ||| |||||||||||||||||||| | |||||||    
T  25959469 -aataggttgtatcaaatggttgttcaaatatcattgctctttt 25959427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 27198129 - 27198048
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||| |||  ||||| ||||||||||||||    
T  27198129 ctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtca-taaaagttgttagcaaatgattgttcaaatatca 27198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 32717618 - 32717508
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaa--agagagagaaaagaagttgt 98  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||        ||||  |||||||||||||||| |||  ||||||||||||  ||||||    
T  32717618 actttctatctcatacttacattatcctcttattctctctcttcttttttatctcttgattgtttttaaccaataaaaagagagagagaaaattagttgt 32717519  T
Q  99 caccaaaagtt 109  Q
    || ||||||||    
T  32717518 catcaaaagtt 32717508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 52727475 - 52727333
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| ||||||||||||| |||         |||| |||| ||||| ||||||||||| ||||| ||||||  ||||||    
T  52727475 actttctctcacatactcacattatactcttattctctctcttactttttcactctgcattatttttgaccaatgaaaatagagaaaaaagagattgtca 52727376  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
     ||||| || | | |||| | |||| ||||||||||||||||||    
T  52727375 -caaaaattgtttcaaatagatgtttaaatatcactactctttt 52727333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 18169203 - 18169341
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||| |  |||||| ||||||||||||| ||||        ||||||||||||||| |||||| |||| ||||  ||||||| |||||| |    
T  18169203 tttctctctcatatttgcattattctcttattctctctcttcctttctctctctccattgtttttgaccaataaaaaaagag--aaaagaaattgtca-c 18169299  T
Q  103 aaaagttt-tatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||| ||| |||||||| ||||||||| | ||||||||    
T  18169300 aaaagtttgtattaaatggttattcaaatatgagtactcttt 18169341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 30839503 - 30839643
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||  ||||||||| || |||||||||| ||||        |||||| || |||||  |||||||||||||||| || ||||||||||| |    
T  30839503 tttctctctcattttcacattatacttttattctctctcttcctttttctctctcctttatttttcgccaatgaaaagagagaaaatagaagttgtca-c 30839601  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    || |||| ||| | ||| ||||| ||||||||||||| ||||    
T  30839602 aagagttgtatcatatgattgtttaaatatcactactttttt 30839643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40785726 - 40785593
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| | |||| | ||        ||||||||||||||| ||||||||||| ||||| ||| || |||||||    
T  40785726 actttctctctcatactcacattatattcttactatctctcatcatttttctctctccattgtttttgaccaatgaaaatagagaaaaaggaggttgtca 40785627  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
     ||||    |||  ||||||||||||||||||||    
T  40785626 tcaaagtcgttagcaaatggttgttcaaatatca 40785593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 3483215 - 3483301
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||||| | ||||||||||||||| |||| ||||||||| || | ||| ||| ||||| ||||||||||| ||||||||    
T  3483215 ctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtca-cagatgttgtatcaaatgattgttcaaataacactactc 3483301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11404987 - 11404944
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  11404987 actttctctctcatacttacattatcctcttattctctctcttc 11404944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29846918 - 29846835
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||  |||||||||||  ||||        ||||||||||||||| ||||| ||||||||||    
T  29846918 actttctctctcatactcacattatattcttattctctttcttcctttttctctctccattgttttttaccaacgaaaagagag 29846835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 35376526 - 35376445
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||||||| || |||||||  ||||||| |||  |||||||| |||||||||||    
T  35376526 ctctccattgtttttgaccaataaaaagagagagaaatgaggttgtca-taaaagttgttaacaaatggttcttcaaatatca 35376445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2935538 - 2935397
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||        |||||||||||| || |||||||| |||| |||  ||  | |||||||    
T  2935538 actttctctttcatactcacattatcttcttattctctctcttcctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtca 2935439  T
Q  101 ccaaaagtttta-tgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| || | |||  |||||||||||| ||||||||||    
T  2935438 -caaaagttgtactaaaagagttgttcaaataacactactctt 2935397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22153908 - 22154049
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        |||||  || ||||  ||||||||||||||||  ||   |||||||||    
T  22153908 actttctctctcatactcacattatattcttattctctcgcttcctttttctctctctgttattttggaccaatgaaaagagagcaaatgaaagttgtca 22154007  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
       |||||| ||  |||||||||| ||||||||||||||||||    
T  22154008 -ttaaagttgtaccaaatggttgtacaaatatcactactcttt 22154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43220168 - 43220131
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43220168 actttctctctcatactcacattatcttcttattctct 43220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43900784 - 43900706
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaa 79  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        |||||||||||||| ||||||| ||||    
T  43900784 actttctctctcatactcacattatattcttattctctctcttcctttttctctctccattgttttgaaccaataaaaa 43900706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 51032649 - 51032608
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  51032649 tttctctctcatactcacattatcttcttattctctctcttc 51032608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 52454067 - 52453986
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| | ||||||||||||  |||||||||| |||  | | ||||||||| ||| |||||||||    
T  52454067 ctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatca 52453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 1402697 - 1402737
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  1402697 ttctctctcatactcacattatcttcttattctctctcttc 1402737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1834550 - 1834627
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaa 78  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        ||||| ||||||||| ||||||||||    
T  1834550 actttctctctcatactcacattatattcttattctctctcttcctttttctctctctattgtttttgaccaatgaaa 1834627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8254071 - 8254204
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| ||  ||||||  |||| ||||        |||||||||||||||| || || | ||||||||||||  | |||||||    
T  8254071 actttctctctcatactcacatgatggtcttatcatctctcttcctttttctctctccattgtttttagccgataagaagagagagaaataatgttgtca 8254170  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
    | |||| | | ||||||||| ||| |||||||||    
T  8254171 ctaaaattgtcatgaaatggatgtacaaatatca 8254204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8627903 - 8627939
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8627903 tttctctctcatactcacattatcttcttattctctc 8627939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 35756076 - 35756128
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||||||||||||||||||||| | |||||||| |||  ||||||||||||||    
T  35756076 ctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaa 35756128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36442260 - 36442296
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctc 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  36442260 actttctctctcatactcacattatcctgttattctc 36442296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37585478 - 37585518
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  37585478 ttctctctcatactcacattatcttcttattctctctcttc 37585518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41877732 - 41877865
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| ||  | |||| ||||| ||||        ||||||||||||||| |||||| |||| ||||| |||  |||||||||    
T  41877732 actttctctctcatactcacatgatgttattatcctctctcttcctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtca 41877831  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||  | | || |||||| ||| |||||||||    
T  41877832 ccaaagttgtcattaaatggatgtacaaatatca 41877865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47988512 - 47988476
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  47988512 actttctctctcatactcacattatcttcttattctc 47988476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47997799 - 47997763
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  47997799 actttctctctcatactcacattatcttcttattctc 47997763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48007086 - 48007050
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  48007086 actttctctctcatactcacattatcttcttattctc 48007050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30664547 - 30664590
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||    
T  30664547 actttctctctcatactcacattatcttcttattttctctcttc 30664590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 44689853 - 44689929
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    |||||||||||||||||||| |||||||||||| ||||        ||||| ||||||||| |||||| ||||||||    
T  44689853 tctctcatactcacattatcttcttattctctctcttcttttttctctctctattgtttttgaccaataaaaagaga 44689929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48490540 - 48490497
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  48490540 actttctctctcatactcacattatctttttattctctctcttc 48490497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 49457661 - 49457708
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| ||||||||||||||||| ||| || |||||||    
T  49457661 ctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtca 49457708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52431227 - 52431184
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  52431227 actttctctctcatattcacattattctcttattctctctcttc 52431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3484803 - 3484841
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  3484803 actttctctctcatactcacattatattcttattctctc 3484841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 21217351 - 21217441
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||||||||||||| |||| ||||||||||| | |||         ||||||||| |||||| | |||||||||||||||||||||||||||    
T  21217351 tctctcatactcacgttatactcttattctcactctttctttttctctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 21217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23585159 - 23585197
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  23585159 actttctctctcatactcacattattctcttattttctc 23585197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23599982 - 23600020
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  23599982 actttctctctcatactcacattattctcttattttctc 23600020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41369641 - 41369679
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  41369641 actttctctctcaaactcacattatcttcttattctctc 41369679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49361862 - 49361824
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  49361862 actttttctctcatactcacattatcttcttattctctc 49361824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 31017419 - 31017378
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  31017419 tttctctctcatactcacgttatcttcttattctctctcttc 31017378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 33971933 - 33972011
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||| ||||||| | || |||         |||||||||||||||||||||||| ||||||||    
T  33971933 tctctcatactcacattatcttcttattttttctctttctttttctctctccattgtttttaaccaatgagaagagaga 33972011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 37035712 - 37035793
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||| ||||||||||||||| |||||||||  |||| |||||||||  |||  | |||  |||| |||||||||||||||    
T  37035712 ctctcctttgtttttaaccaataaaaagagaggaaaaaaaagttgtcaagaaagttgttagcaaatagttgttcaaatatca 37035793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 40478262 - 40478181
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||| |||||||||| |||||| |||||||||  |||  ||||||||||||||| | | || |||||| ||| |||||||||    
T  40478262 ctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 40478181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 41717359 - 41717399
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag 94  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  41717359 ctctccattgtttttgaccaatgaaaagagaga-aaaagaag 41717399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 43409340 - 43409303
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa 90  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  43409340 ctctccattgtttttgaccaatgaaaagagagaaaaaa 43409303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 44383043 - 44383087
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||    
T  44383043 ctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 44383087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 46092929 - 46092845
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||||| |||||| |||||||||  |||| ||||||| |  | || || ||  |||||||||||||||||||||||||||||    
T  46092929 cattgtttttgaccaataaaaagagaggaaaaaaaagttgtaatgataa-ttgtaaaaaatggttgttcaaatatcactactcttt 46092845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 48205091 - 48205132
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  48205091 tttctctctcatactcacattatctttttattctctctcttc 48205132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 20216049 - 20216125
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||||||| ||| ||  ||||||||| ||| || |||||||| |||| | |||  ||||||||||||||||||||    
T  20216049 cattgtttttgaccgatagaaagagagaaaaatgaggttgtcacaaaaattgttagtaaatggttgttcaaatatca 20216125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 31326804 - 31326836
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  31326804 ctctccattgtttttgaccaatgaaaagagaga 31326836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 32151935 - 32151975
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  32151935 ttctctctcatactcatattatcttcttattctctctcttc 32151975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 55195443 - 55195490
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||||||    
T  55195443 ctctccattgtttttaaccgatgaaaagagag-gaaaaaaaattgtcac 55195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 132)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36792376 - 36792524
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||||| ||||||| || ||||        ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36792376 actttttctctcatactcacattatccttttattctttctcttcctttttctctctccattatttttaaccaatgaaaagagagagaaaagaagttgtca 36792475  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaat 149  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36792476 ccaaaagttgtatgaaatggttgttcaaatatcactactctttaaaaat 36792524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6953415 - 6953276
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||| ||||| | ||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6953415 actttatctctcatactcatattattcccttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 6953316  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  6953315 ccaaaagttgtaagaaatggttgttcaaatatcactactc 6953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 1580308 - 1580171
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||||| |||||||||||||||| |||| ||||||||||     
T  1580308 tttctctctcatactcacattatcctcttattatctctcttcttttttctctctccattgtttttatccaatgaaaagagagaaaaaaaaagttgtcaca 1580209  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1580208 aaaagttgtatgaaatggttgttcaaatatcactactc 1580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39241328 - 39241187
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||        ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  39241328 actttctctctcatactcacattatcctcttattctctc--ttcctttttctctctccaatgtttttaaccaatgaaaagagagagaaaataagttgtca 39241231  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| | | ||||||||||| ||||||||||||||||||    
T  39241230 ccaaaagttgtctcaaatggttgttaaaatatcactactctttt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 22257218 - 22257084
Alignment:
Q  6 ctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||| |||||||||||||||| |||||||||||| ||||        ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  22257218 ctctatcatactcacattatcatcttattctctctcttcctttttctctctctattgtttttaaccaatgaaaagagagagaaaa-aagttgtcaccaaa 22257120  T
Q  106 agttttatgaaatggttgttcaaatatcactactct 141  Q
    |||| |||||||||||||||||||||||||||||||    
T  22257119 agttgtatgaaatggttgttcaaatatcactactct 22257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31240692 - 31240833
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||| |||||||||||  ||||||| |||| |||         |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  31240692 actttctctctcaaactcacattattatcttattatctctctttctttttctctcttcattgtttttaaccaatgaaaagagagaaaaaagaagttgtca 31240791  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  31240792 ccaaaagttgtatgaaatggttgttcaaatatcactactctt 31240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 52392252 - 52392114
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  52392252 actttatctctcatactcacattatcctcttattctatctcttcatttttctctctccattgtttttaaccaatgaaagtagagaaaaaagaagttgtca 52392153  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  52392152 ccaaaagttgtatgaaatggttgtt--aatatcactactct 52392114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 41952872 - 41953008
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| |||||||||| ||||| |||||||||||| |||         ||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  41952872 actttctctatcatactcaccttatcatcttattctctctctttctttttctctctccattgtttttaatcaatgaaaagagagaaaaaaaaagttgtca 41952971  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||||| |||||||||||||||||||||||||||    
T  41952972 ccaaaagttatatgaaatggttgttcaaatatcacta 41953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 42915244 - 42915104
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||| |||| ||||||||||||| ||||        || || ||||||||||||||||||||||||||| |||||||||||||| |    
T  42915244 tttctctctcatactcacgttatactcttattctctctcttcctttttctctttctattgtttttaaccaatgaaaagagagaaaaaagaagttgtca-c 42915146  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||| ||| |||| |||||||||||||||||||||||||    
T  42915145 aaaagttgtatcaaatagttgttcaaatatcactactctttt 42915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 48326585 - 48326725
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||        |||||||||||||||| ||||||||||||||   |||| |||||||||    
T  48326585 actttttctctcatactcacattatcatcttattctctctcttcctttttttctctccattgtttttatccaatgaaaagaga---aaaaaaagttgtca 48326681  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    | |||| || ||||||||||||| ||||||||||||||||||||    
T  48326682 ctaaaaattatatgaaatggttgatcaaatatcactactctttt 48326725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31275190 - 31275329
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||  |||         ||||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  31275190 actttctctctcatactcacattattatcttattctctttctttcttttcctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtca 31275289  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| ||| |||||||||||||||||||||||||||    
T  31275290 -caaaagttgtatcaaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 51039143 - 51039003
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||| ||||||||| |||||||||| || ||||        ||||||||||||||||||||||||||||||| | |||| |  ||||||    
T  51039143 actttatctctcataatcacattattctcttattctatctcttcctttttctctctccattgtttttaaccaatgaaaagagaaaaaaaaaa--ttgtca 51039046  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  51039045 ccaaaagttgtatgaaatggttgtttaaatatcactactcttt 51039003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 55927031 - 55927169
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||||||||| ||||||||||||| ||||        |||| |||||||||| ||||||||||||||||||||||||| |||||| ||    
T  55927031 ttctctctcatactcacattatactcttattctctctcttcttttttctctcttcattgtttttgaccaatgaaaagagagagaaaagaaattgtca-ca 55927129  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||| || | | |||||| ||||||||||||||||||||||    
T  55927130 aaaattgtctcaaatggatgttcaaatatcactactcttt 55927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 36413351 - 36413212
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| ||||||||||||| ||||        |||||||||||||||||| |||||||||||| | ||||||| |||||| |    
T  36413351 tttctctctcatactcacattatactcttattctctctcttc-tttttctctctccattgtttttaactaatgaaaagagaaaaaaaagaaattgtca-c 36413254  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||| ||| |||| |||||||||||||||| ||||||||    
T  36413253 aaaagttgtatcaaatagttgttcaaatatcaccactctttt 36413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30778291 - 30778152
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||        |||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  30778291 actttctctctcatactcacattatactcttattatctctcttcctttttctctctccattgtttttaaccaataaaaagagagaaaaaagaaattgtca 30778192  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
      ||||||| ||| |||| ||||||||||||||| ||||||    
T  30778191 -taaaagttatatcaaatagttgttcaaatatcattactct 30778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 51389360 - 51389499
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||||||||| |||| |||||||| |||         ||||||||||||||| || |||||||||||||| ||||||||||||||    
T  51389360 actttctctttcatactcacattattctctaattctctctctttctttttctctctccattgttttttactaatgaaaagagagaaaaaagaagttgtca 51389459  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| ||| |||||||||||||||||||||| ||||    
T  51389460 -caaaagttgtatcaaatggttgttcaaatatcactgctct 51389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 54036556 - 54036419
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||| ||||| ||||||||||||| ||||        ||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  54036556 actttatctctcatactcaaattattctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaa--agttgtca 54036459  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||| || ||  ||||||||||||||||||||| ||||    
T  54036458 ccaaaaattgtacaaaatggttgttcaaatatcaccactc 54036419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5234498 - 5234360
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| ||||| |||||||||||||  |||        ||||||||||||||| |||||| |||||||||| |||| || ||||||    
T  5234498 actttctctctcatactcatattattctcttattctctcttttcttttttttctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtca 5234399  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | ||||||| ||| ||||||||||||||||||||||||||    
T  5234398 c-aaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28480565 - 28480427
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||| ||||||||||| ||||||| ||||        ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  28480565 actttctctgtcatactcatattatcctcttgttctctctcttcttttttctctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtca 28480466  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     ||| |||| | | |||| |||||||||||||||||||||    
T  28480465 -caatagttgtctcaaatagttgttcaaatatcactactc 28480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28481439 - 28481301
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||| ||||||||||| ||||||| ||||        ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  28481439 actttctctgtcatactcatattatcctcttgttctctctcttcttttttctctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtca 28481340  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     ||| |||| | | |||| |||||||||||||||||||||    
T  28481339 -caatagttgtctcaaatagttgttcaaatatcactactc 28481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28482314 - 28482176
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||| ||||||||||| ||||||| ||||        ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  28482314 actttctctgtcatactcatattatcctcttgttctctctcttcttttttctctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtca 28482215  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     ||| |||| | | |||| |||||||||||||||||||||    
T  28482214 -caatagttgtctcaaatagttgttcaaatatcactactc 28482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4896527 - 4896387
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| ||| ||||||||| ||||        ||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  4896527 actttctctcgcatactcacattatactcctattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtca 4896428  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| | | |||| | |||||||||||||||||||||    
T  4896427 -caaaagttgtttcaaatagatgttcaaatatcactactctt 4896387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 48099906 - 48099993
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||||||||||||||||||| |||||||| | |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  48099906 ctctccattgtttttaaccaataaaaagagaaaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgtttaaatatcactactct 48099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3286862 - 3287000
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||| |||||||| | |||||||||| ||||        |||||||||||||||||||||||||||  |||| |||| || ||||||    
T  3286862 actttctctctcatacttacattatctttttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaaggagaaaaaataaattgtca 3286961  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | ||||||||||||||||||||||| ||||    
T  3286962 -caaaagttgtgtgaaatggttgttcaaatatcaccactc 3287000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 24772718 - 24772855
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||||||||| ||||||||||||| ||||        ||||| ||||||||| |||||| |||||||||||||||||| |||||| ||    
T  24772718 ttctctctcatactcacattatactcttattctctctcttcatttttctctctcaattgtttttgaccaataaaaagagagagaaaagaaattgtca-ca 24772816  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    | |||| | | |||||| |||||||||||||| ||||||    
T  24772817 agagttgtctcaaatggatgttcaaatatcaccactctt 24772855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 46173583 - 46173721
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||| |||||||||||| |||||||||||||  |||        ||||||||||||||| ||||||||||||||| | ||||||| ||||||    
T  46173583 actttctctctcgtactcacattattctcttattctctc--ttcctttttctctctccattgttttttaccaatgaaaagagaaaaaaaagaaattgtca 46173680  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| ||| |||||||| ||||||||||| |||||||    
T  46173681 -caaaagttgtatcaaatggttattcaaatatcattactctt 46173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 36512889 - 36512986
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36512889 ttctctctcatactcacattatactcttattctctctcttcatttttctctctccattgttttttaccaataaaaagagagagaaaagaagttgtcac 36512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10994179 - 10994041
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| || |||||||||| ||||        |||||||||||||||||||||| ||||||||||||||||||||||||     
T  10994179 actttatctctcatactcacattattcttttattctctctcttcctttttctctctccattgtttttaaccaat-aaaagagagagaaaagaagttgtc- 10994082  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     || || || | | ||||| |||||||||||||||||||||    
T  10994081 gcataaattgtctaaaatgattgttcaaatatcactactct 10994041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 48372187 - 48372112
Alignment:
Q  67 taaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||||||| ||||||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  48372187 taaccaatgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactctt 48372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 15596444 - 15596578
Alignment:
Q  5 tctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaa 104  Q
    |||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||  |||||||||||  |||| |||||||||||||| |||    
T  15596444 tctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtca-caa 15596542  T
Q  105 aagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| | | ||||||||||||||||||||||||||    
T  15596543 aagttgtttaaaatggttgttcaaatatcactactc 15596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 31658015 - 31658104
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||| |||||| | ||| ||||||||||||||||||| |||||||||    
T  31658015 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtca-caaaagctgtatcaaatggttgttcaaatatcgctactcttt 31658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 47998638 - 47998779
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||| | ||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||| ||| |||| ||||| |||    
T  47998638 actttttctctcatacttatattattctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagaaagaaaaaa-aagttatca 47998736  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    | ||||||| ||| ||||| ||||||||||||||||||||||||    
T  47998737 c-aaaagttgtatcaaatgattgttcaaatatcactactctttt 47998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 36408216 - 36408089
Alignment:
Q  15 actcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatg 114  Q
    ||||||||||| ||||||||||||| ||||        |||||||||||||||||| |||||||||||| | ||||||| |||||| |||||||| |||     
T  36408216 actcacattatactcttattctctctcttc-tttttctctctccattgtttttaactaatgaaaagagaaaaaaaagaaattgtca-caaaagttgtatc 36408119  T
Q  115 aaatggttgttcaaatatcactactctttt 144  Q
    |||| |||||||||||||||| ||||||||    
T  36408118 aaatagttgttcaaatatcaccactctttt 36408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 9567662 - 9567580
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||||||| |||||||||||||| | |||| ||||||||||||||| || ||| |||||||||||||||||||||||||    
T  9567662 tccattgtttttatccaatgaaaagagaaaaaaaa-aagttgtcaccaaaaattgtataaaatggttgttcaaatatcactact 9567580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38160800 - 38160661
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||        ||||||||||||||| || |||||||| ||||| |||| |||||||||    
T  38160800 actttctctctcatactcatattatactcttattctctctcttcatttttctctctccattgtttttgactaatgaaaaaagagaaaaaataagttgtca 38160701  T
Q  101 ccaaaagttttatgaaatg-gttgttcaaatatcactactc 140  Q
     || ||||| | | ||||| |||||||||||||||||||||    
T  38160700 -cataagttgtctaaaatgagttgttcaaatatcactactc 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 49194927 - 49195027
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||        ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  49194927 actttctctcttatactcacattagactcttattctctctcttcctctttctctctccattgtttttgaccaataaaaagagagagaaaagaagttgtca 49195026  T
Q  101 c 101  Q
    |    
T  49195027 c 49195027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 9162112 - 9162215
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||| |||||| |||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| |||||||||||||||     
T  9162112 tttctctctaatactcgcattattctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 9162211  T
Q  103 aaaa 106  Q
    ||||    
T  9162212 aaaa 9162215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38844517 - 38844379
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| ||| ||||||||| ||||||||||| | ||||        ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  38844517 actttctctcttatattcacattattctcttattctccctcttcttttttctctctctattgtttttgaccaatgaaaagagagagaaaataagttgtca 38844418  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||||||||||||||| || |||||    
T  38844417 -caaaagttgtctcatatggttgttcaaataacattactc 38844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 38952733 - 38952871
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||        ||||||||||||||| ||||||||||| ||||| ||||||| || |||    
T  38952733 actttctctctcatactcacattattctcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaaattatca 38952832  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     ||||| || ||| ||||  ||||| ||||||||||||||    
T  38952833 -caaaaattgtatcaaataattgtttaaatatcactactc 38952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 29384224 - 29384087
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| ||||||||||||| || ||||||||||  |||        ||||||||||||||| ||||||||||| ||||| || |||||||||||    
T  29384224 actttctctcttatactcacattatacttttattctctctattcttttttatctctccattgtttttgaccaatgaaaaaagagaaaatagaagttgtca 29384125  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
     ||| |||| ||| | ||| |||||||||||||||||||    
T  29384124 -caagagttgtatcatatgattgttcaaatatcactact 29384087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36444422 - 36444282
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || |||||||| | ||||         |||||||||||||| ||||||||||| ||||| || |||||||||||    
T  36444422 actttctctctcatactcacattatacttttattctccctcttccttttactttctccattgtttttgaccaatgaaaaaagagaaaatagaagttgtca 36444323  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     ||| | || ||| | ||| ||||||||||||||||||||||    
T  36444322 -caagaattgtatcatatgattgttcaaatatcactactctt 36444282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25523225 - 25523083
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctcc--attgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||||||||||||||||||||| | | |||         |||||   ||||||||| |||||||||||||||||||||| ||||| |    
T  25523225 actttctctctcatactcacattatcctcttattccccctctttctttttctctctctctattgtttttgaccaatgaaaagagagagaaaataagttat 25523126  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    || |||||||| | | | ||||||||||||||| ||||||||||    
T  25523125 ca-caaaagttgtctcatatggttgttcaaataacactactctt 25523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 43168685 - 43168603
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||| ||||||||||| | |||| |||||||||||||||  | |||||||||||||||||||||| |||||||||    
T  43168685 attgtttttaaccgatgaaaagagaaaaaaaa-aagttgtcaccaaaaactgtatgaaatggttgttcaaatattactactctt 43168603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46794528 - 46794432
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  46794528 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgtttttgaccaatgaaa--agagaaaaaagaagttgtc 46794432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 53583155 - 53583017
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||||||   |||         || |||||||||||| |||||| |||| |||||||||| |||||||||    
T  53583155 actttctctctcatactcacattatcctcttattctccatctttctttttctctttccattgtttttgaccaattaaaatagagagaaaataagttgtca 53583056  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||||||||||||||| || |||||    
T  53583055 -caaaagttgtctcatatggttgttcaaataacagtactc 53583017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 11064113 - 11063976
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||||||||| ||||||||||||  ||||        ||||| ||||||||| ||| || |||||| ||| ||   ||||||||||||    
T  11064113 ttctctctcatactcacattatgctcttattctctttcttcctttttctctctctattgtttttgaccgataaaaagaaagaaaatgaaagttgtcacca 11064014  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    || ||| | | ||||||||||||||||||||||||||||    
T  11064013 aa-gttgtcttaaatggttgttcaaatatcactactctt 11063976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 30973630 - 30973766
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||| |||||||||||||||||||||||| |||| |||         |||||||| ||||||||||||| |||||||||| |||| |  || |||    
T  30973630 actttttctttcatactcacattatcctcttattttctctctt--tctttttctctccatagtttttaaccaataaaaagagagaaaaaaaa--ttatca 30973725  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    | |||| || |||||||| ||||||||||||||||||||||    
T  30973726 caaaaaattgtatgaaatagttgttcaaatatcactactct 30973766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 34116565 - 34116429
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| |||||||||| || ||||        ||||||||||||||| | | ||||||||||||| |||| ||||||||| |    
T  34116565 tttctctctcatactcacattatactcttattctttctcttcctttttctctctccattgtttttgatcgatgaaaagagagaaaaaaaaagttgtca-c 34116467  T
Q  103 aaaagttttatgaaatg-gttgttcaaatatcactact 139  Q
    | || || | | ||||| ||||||||||||||||||||    
T  34116466 ataaattgtctaaaatgagttgttcaaatatcactact 34116429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 16004350 - 16004216
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||        |||| |||| ||||| ||||||||||||||||| |||| |||||||||| |    
T  16004350 ttctctctaatattcacattatactcttattctctctcttcttttttctctcttcattatttttgaccaatgaaaagagagaaaaaa-aagttgtcac-a 16004253  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | |||| | | |||||| |||||||||||||||||||    
T  16004252 agagttgtctcaaatggatgttcaaatatcactactc 16004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24337383 - 24337283
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||        ||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  24337383 actttatctctcatactcacattatactcttattctttctcttcatttttctctctccattttttttgaccaatgaaaagagagaaaaaagaagctgtca 24337284  T
Q  101 c 101  Q
    |    
T  24337283 c 24337283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29577463 - 29577379
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||||||||||||||    
T  29577463 actttctttctcatactcacattatcttcttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagagaga 29577379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 51318797 - 51318879
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||| |||||||||||||||| |||| ||||| |||| || |||||||||||| || ||||||||||||||| ||||||||||    
T  51318797 ctctcgattgtttttaaccaataaaaaaagagaaaaaaaaa-ttgtcaccaaaaattatatgaaatggttgtttaaatatcact 51318879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 51717259 - 51717169
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||| || ||||| | | | ||| ||||||||||||||||||||||||    
T  51717259 ctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtca-cataagttgtctcatatgattgttcaaatatcactactctttt 51717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 41951670 - 41951718
Alignment:
Q  92 aagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  41951670 aagttgtcaccaaaaattatatgaaatggttgttcaaatatcactactc 41951718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1031799 - 1031895
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttg 97  Q
    |||||||||||||||||||||||||  | |||||||||| |||         ||||||||||||||| |||||||||||| |||| |||||||||||    
T  1031799 actttctctctcatactcacattatgtttttattctctctctttctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttg 1031895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 17363274 - 17363409
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        ||||| ||||||||  ||||||||||||||||  ||   |||||||||    
T  17363274 actttctctctcatactcacattatattcttattctctctcttcttttttctctctctattgttttggaccaatgaaaagagagcaaatgaaagttgtca 17363373  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
     | |||||| ||| |||||||| | ||||||||||||    
T  17363374 tc-aaagttgtataaaatggttttacaaatatcacta 17363409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 46844268 - 46844164
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| |   ||||||| |||| ||||        |||||||||||||||||||||| |||||||||| |||  |||||||||    
T  46844268 actttctctctcatactcacatgacattcttattttctctcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtca 46844169  T
Q  101 ccaaa 105  Q
    |||||    
T  46844168 ccaaa 46844164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 53091205 - 53091114
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaa----atggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||| |||  ||||| |||||||||||||| |||||||| ||| ||    |||||||||||||||||||||||||    
T  53091205 ctctccattgtttttgaccaataaaagaagagaaaaaagaagttgtca-caaaagttgtatcaaatggatggttgttcaaatatcactactct 53091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 1033267 - 1033332
Alignment:
Q  76 aaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||| ||||| ||||||||||||||| ||||||| | | ||||||||||||||||||||||||||||    
T  1033267 aaaaaagagaaaaaagaagttgtcac-aaaagttgtttaaaatggttgttcaaatatcactactctt 1033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40409193 - 40409055
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||| ||| |||         ||||||||| ||||| | |||| ||||| |||| |||||||||||| |    
T  40409193 actttctctctcatactcacattatgtttttattccctctctttctttttctctctccattatttttgatcaataaaaagtgagaaaaaagaagttgt-a 40409095  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||   | |||| |||||||||||||||||||||    
T  40409094 ccaaaagttggctaaaatagttgttcaaatatcactactc 40409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44165953 - 44166034
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| || ||||||||||||    
T  44165953 actttctctctcatactcacattattctcttattctctctcttc-tttttttctctccattgtttttgacaaatgaaaagaga 44166034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45277108 - 45277026
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||        |||||| |||||||| |||||||||||||||    
T  45277108 actttctctctcatactcacactatcctcttattctccctcttcctttttctctctccgttgtttttgaccaatgaaaagaga 45277026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 46911942 - 46912040
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||| |||||| |||| | ||||         |||| ||||||||| ||||||||||||||||| |||| ||||||||    
T  46911942 actttctctctcatactcacattattctcttactctccctcttcatttttctttctcaattgtttttgaccaatgaaaagagagaaaaaataagttgtc 46912040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 525775 - 525907
Alignment:
Q  9 tctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagt 108  Q
    |||||||||||||||||||| ||||||| || | ||        ||||| |||| ||||||| ||||||||||||||||||| || |||||| |||||||    
T  525775 tctcatactcacattatccttttattctatctcatcatttttctctctctattgattttaactaatgaaaagagagagaaaaaaaattgtca-caaaagt 525873  T
Q  109 tttatgaaatggttgttcaaatatcactactctt 142  Q
    | | | ||||  |||||||| |||||| ||||||    
T  525874 tgtctcaaataattgttcaattatcacgactctt 525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 23347821 - 23347857
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  23347821 tttctctctcatactcacattatcctcttattctctc 23347857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 34974549 - 34974597
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  34974549 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcac 34974597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4577601 - 4577644
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  4577601 actttctctctcatactcacattatcttcttattctctctcttc 4577644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 4878014 - 4878094
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||| |||||| |||||||||||| ||||        || |||||||||||| ||||||||||||||||    
T  4878014 ttctctctcatactcatattatcttcttattctctctcttcctttttctctttccattgtttttgaccaatgaaaagagag 4878094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9472540 - 9472497
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  9472540 actttctctctcatactcacattatcttcttattctctctcttc 9472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 18874949 - 18874809
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| ||||||  |||        ||||||||||||||| |||||||| |||||||| ||| || |||||||    
T  18874949 actttctctctcatactcacattatattcttactctctc--ttcctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtca 18874852  T
Q  101 ccaaaagtt-ttatgaaatggttgttcaaatatcactactcttt 143  Q
      ||||||| |||  ||||| |||||||||||||| | ||||||    
T  18874851 -taaaagttgttagcaaatgattgttcaaatatcattgctcttt 18874809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39881057 - 39881014
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  39881057 actttctctctcatactcacattatcttcttattctctctcttc 39881014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 47134804 - 47134729
Alignment:
Q  64 ttttaaccaatgaaaagagagagaa-aagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactac 138  Q
    ||||| ||||| |||||||||| || || |||||||||| |||| || |||||||| |||||||||||||||||||    
T  47134804 ttttatccaataaaaagagagaaaagaaaaagttgtcacgaaaaattatatgaaatagttgttcaaatatcactac 47134729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 2613586 - 2613505
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| |||||| ||||||||||||||  |  ||||||| ||||||| |||| |||||||||||||||||||| |||||    
T  2613586 attgtttttgaccaattaaaagagagagaaagtagattgtcac-aaaagttgttatcaaatggttgttcaaatatcattactc 2613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 5123565 - 5123480
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||| | ||| |||||| |||||||||| |||| |||||||||| ||||||| | | | ||||||||||||||| |||||||    
T  5123565 ctctccattatatttgaccaattaaaagagagaaaaaataagttgtcac-aaaagttgtctcatatggttgttcaaataacactact 5123480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22893912 - 22893995
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||| |||||||||||||||| |||||||||||| |||         ||||||||||||||| |||||| |||||||||    
T  22893912 actttctctttcatactcacattatcttcttattctctctctttctttgtctctctccattgtttttgaccaataaaaagagag 22893995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22945580 - 22945663
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||| |||||||||||||||| |||||||||||| |||         ||||||||||||||| |||||| |||||||||    
T  22945580 actttctctttcatactcacattatcttcttattctctctctttctttgtctctctccattgtttttgaccaataaaaagagag 22945663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 23690275 - 23690409
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||| |||||||||||||| ||||||||| ||| |||         ||||||||| ||||| ||||||||||||||||| ||||||  ||||||    
T  23690275 actttatctcacatactcacattatactcttattccctctctttctttttctctctccattatttttgaccaatgaaaagagagaaaaaagatattgtca 23690374  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
     ||||| || | | |||| | |||||||||||||||    
T  23690375 -caaaaattgtttcaaatagatgttcaaatatcact 23690409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 39844283 - 39844188
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||| |||||||||||| ||||| | |||||||||||  |||        ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  39844283 tttccctctcatactcatattatacccttattctctctattcctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgt 39844188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28676179 - 28676049
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtc 99  Q
    ||||||||| |||||||||||||||  ||||| |||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  28676179 actttctctttcatactcacattatattcttactctctctcttc--ctttttctctccattgtttttgaccaatgaaaagagaga-aaaagaaggttgtc 28676083  T
Q  100 accaaaagttttatgaaatggttgttcaaatatca 134  Q
    |  ||| ||| ||  ||||||||||| ||||||||    
T  28676082 a-aaaaggttgtacaaaatggttgtttaaatatca 28676049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 32901425 - 32901513
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||| |||||||||| |||| ||| |||||||||||| | | || || ||| ||| ||||||||||||||||    
T  32901425 ctctccattgtttttgaccaataaaaagagaga-aaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatcactactct 32901513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 33860521 - 33860440
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| | |||||||| ||| || ||||||| ||||  | |||  ||||||||||||||||||||    
T  33860521 ctctccattgtttttgaccaataataagagagaaaaatgaggttgtcatcaaagttgttagcaaatggttgttcaaatatca 33860440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 34616397 - 34616490
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||| |||| ||||||||||| | |||         ||||||||| |||||| | |||||||||||||||||||||||||||    
T  34616397 ttctctctcatactcacgttatactcttattctcactctttctttttctctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 34616490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 36364809 - 36364672
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    ||||||||||||||||||||||| |||||||||||| ||||        | ||| ||||||||| |||||| | |||||||| || | | | ||||| ||    
T  36364809 ttctctctcatactcacattatcttcttattctctctcttcctttttctccctctattgtttttgaccaataagaagagagaaaagataggctgtca-ca 36364711  T
Q  104 aaagtt-ttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| | || ||| |||||||||||||||| ||||||    
T  36364710 aaagttgtcatcaaaaggttgttcaaatatcattactct 36364672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 40755967 - 40756008
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  40755967 tttctctctcatactcacattatcttcttattctctctcttc 40756008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 42169436 - 42169391
Alignment:
Q  95 ttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  42169436 ttgtcaccaaaagttatattaaatggttgttcaaacatcactactc 42169391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 42169745 - 42169708
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42169745 tctctcatactcacattatcctcttattctctctcttc 42169708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 52891829 - 52891792
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa 90  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  52891829 ctctccattgtttttgaccaatgaaaagagagagaaaa 52891792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 55996468 - 55996509
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  55996468 tttctctctcatactcacattatcttcttattctctctcttc 55996509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 56379436 - 56379473
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  56379436 actttctctctcatactcacattattctcttattctct 56379473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 940245 - 940161
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaag-agagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||||||| |||||||||||||||||| | ||| |||| || |  |||| |||| || ||| ||||||||||||||||||||||    
T  940245 ctctccattatttttaaccaatgaaaagaaaagaaaaaaaaattaatcacaaaaaattatataaaatggttgttcaaatatcact 940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6126900 - 6126940
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  6126900 ttctctctcatactcacattatcttcttattctctctcttc 6126940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 9095983 - 9096019
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9095983 tttctctctcatactcacattatcttcttattctctc 9096019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 32294784 - 32294744
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  32294784 ttctctctcatactcacattatcttcttattctctctcttc 32294744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 41609647 - 41609560
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| ||||||||| |||||| |||||||||| ||||| || ||||||| |||| | | || |||||||||||||||||||| |||||    
T  41609647 ctctctattgtttttgaccaattaaaagagaga-aaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcattactc 41609560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 42510950 - 42510809
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||| |||||||||||||  ||||| |||||| | ||        ||||||||||||||| || |||||||| ||||| ||| || || |||| |    
T  42510950 tttctctcttatactcacattatattcttactctctctcatcatttttctctctccattgtttttgacaaatgaaaatagagaaaaaggaggtcgtcatc 42510851  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||  | |||  |||||||||||||||||||| | |||||||    
T  42510850 aaagttgttagcaaatggttgttcaaatatcattgctctttt 42510809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 46799803 - 46799843
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  46799803 ttctctctcatactcacattatcttcttattctctctcttc 46799843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1987740 - 1987656
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||| |||||||||||  | |||||||||| || |        ||||||||||||||| |||||||||||||||||    
T  1987740 actttctctctcacactcacattatgtttttattctctctctacctttttctctctccattgtttttgaccaatgaaaagagaga 1987656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4511858 - 4511901
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  4511858 actttctctctcatactcacattatattcttattctctctcttc 4511901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7161552 - 7161509
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  7161552 actttctctctcatattcacattatactcttattctctctcttc 7161509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 21766594 - 21766629
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21766594 ttctctctcatactcacattatcttcttattctctc 21766629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 36488490 - 36488418
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaa 79  Q
    ||||||||||||| ||||||||||||||||||| |||         |||||||||||||||||||||| ||||    
T  36488490 tctctcatactcatattatcctcttattctctctcttgtttttattctctccattgtttttaaccaataaaaa 36488418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48650283 - 48650199
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||        ||||||||||||||| |||||| | ||||||||    
T  48650283 actttctctctcatactcatattatcttcttattctctcttttcctttttctctctccattgtttttgaccaataagaagagaga 48650199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 54803355 - 54803273
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  |||||||||||| || |        ||||||||| ||||| |||||||||||||||||    
T  54803355 actttctctctcatactcacattatgttcttattctctctctac--ctttttctctccattttttttgaccaatgaaaagagaga 54803273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1688455 - 1688417
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  1688455 actttctctctcatactcacattatattcttattctctc 1688417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 3664784 - 3664709
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaa 79  Q
    ||||||||||||| |||||||| ||||||||||||| ||||         ||||||||||||||||||||| ||||    
T  3664784 ttctctctcatacccacattatactcttattctctctcttcatttttctttctccattgtttttaaccaataaaaa 3664709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 13267453 - 13267364
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| |||||| | |||||||| |||  ||||| ||| | |||||| |||||||| | | | ||||||||||||||||||    
T  13267453 ctctccattgtttttgaccaataagaagagagaaaaacaaagttttcatc-aaagttgtatgaaatcgatttacaaatatcactactcttt 13267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34259859 - 34259897
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  34259859 actttctctctcatactcacattatcttcttactctctc 34259897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35332750 - 35332788
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  35332750 actttctctctcatactcacattatattcttattctctc 35332788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 41119501 - 41119455
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||| ||||||||||||||||  |||| ||||||||    
T  41119501 ctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtc 41119455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46912826 - 46912788
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  46912826 actttctctctcatactcacattatattcttattctctc 46912788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 50258458 - 50258492
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagaga 87  Q
    |||| ||||||||||||||||||||||||||||||    
T  50258458 ctctacattgtttttaaccaatgaaaagagagaga 50258492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 50291329 - 50291363
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  50291329 ttctctctcatactcacattatcttcttattctct 50291363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52224137 - 52224175
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  52224137 actttctctcacatactcacattatactcttattctctc 52224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53357104 - 53357066
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  53357104 actttctctctcatactcacattatctttttattctctc 53357066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 17805498 - 17805539
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  17805498 tttctctctcatactcacattattttcttattctctctcttc 17805539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 22920297 - 22920260
Alignment:
Q  2 ctttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  22920297 ctttctctctcatactcacattatattcttattctctc 22920260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 22971502 - 22971539
Alignment:
Q  2 ctttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  22971502 ctttctctctcatactcacattatattcttattctctc 22971539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36081843 - 36081880
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||  |||||||||||    
T  36081843 actttctctctcatactcacattatattcttattctct 36081880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 41495109 - 41495162
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    ||||||||||||||| |||||| | |||||||| |||  |||||||||||||||    
T  41495109 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaaa 41495162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8614223 - 8614263
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  8614223 ttctctctcatactcacattattttcttattctctctcttc 8614263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 12638920 - 12638952
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  12638920 ctctccattgtttttgaccaatgaaaagagaga 12638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 20632623 - 20632535
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| ||||||   |||||| | |||  ||||||||||||||| | | || || ||| ||| ||||||||||||||||    
T  20632623 ctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatatcactactct 20632535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 24019946 - 24019894
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    ||||||| ||||||| |||||| ||||||||||||||  | ||||||||||||    
T  24019946 ctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaa 24019894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 30042228 - 30042315
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagag-agaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| ||||||||| ||||||||||  |||| | |||| ||||| |||  ||||||| |||||||| ||||||||||||||| |||||    
T  30042228 ctctctattgtttttgaccaatgaaattagaggaaaaaaaaagttatcat-aaaagttgtatgaaatagttgttcaaatatcattactc 30042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 32621723 - 32621755
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  32621723 ctctccattgtttttgaccaatgaaaagagaga 32621755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 35580206 - 35580254
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||| ||||| ||||||||||||||||  |||| ||||||||||    
T  35580206 ctctccattatttttgaccaatgaaaagagaggaaaaaaaagttgtcac 35580254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 36110181 - 36110221
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  36110181 ttctctctcatattcacattatcttcttattctctctcttc 36110221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 36123029 - 36122981
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||| ||||||||| |||||| |||| ||||| |||||||||||||||    
T  36123029 ctctctattgtttttgaccaatcaaaatagagaaaaaagaagttgtcac 36122981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 36728597 - 36728545
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    ||||||||||||||| |||||| | |||||||| |||  ||||||||||||||    
T  36728597 ctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaa 36728545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 45779266 - 45779230
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaa 89  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  45779266 ctctccattgtttttgaccaatcaaaagagagagaaa 45779230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 46567025 - 46567057
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  46567025 ctctccattgtttttgaccaatgaaaagagaga 46567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 56025352 - 56025404
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    ||||||||||||||| |||||| |||||||||| ||   ||||||||||||||    
T  56025352 ctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaa 56025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 118)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 48872978 - 48872835
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  48872978 actttctctctcatactcacattatcctcttattctctctcttcatttttctctctccaatgtttttatccaatgaaaagagagagaaaa-aagttgtca 48872880  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  48872879 ccaaaagttgtatgaaatggttgttcaaatatcactactctttta 48872835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 15061891 - 15062030
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||| |||||||||||| ||||        |||||||||||||||| ||||| |||||||||| |||| |||||||||||    
T  15061891 tttctctctcatactcacattatcatcttattctctctcttcctttttctctctccattgtttttatccaataaaaagagagaaaaaaaaagttgtcacc 15061990  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15061991 aaaagttatatgaaatggttgttcaaatatcactactctt 15062030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 40610276 - 40610411
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  40610276 ttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtca-ca 40610374  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||| | | |||||| |||||||||||||||||||    
T  40610375 aaagttgtctcaaatggatgttcaaatatcactactc 40610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 45272187 - 45272050
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa--gttgt 98  Q
    |||||||||||||||||||||||||||| |||||||||| ||||         |||||||||||||||||||||||||||||||| |||| ||  ||| |    
T  45272187 actttctctctcatactcacattatccttttattctctctcttcctttttctatctccattgtttttaaccaatgaaaagagagaaaaaaaaaaagttat 45272088  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  45272087 caccaaaagttgtatgaaatggttgttcaaatatcact 45272050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 49425781 - 49425919
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||| |  || |||    
T  49425781 actttatctctcatactcacattattttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaa--ttatca 49425878  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  49425879 ccaaaagttgtatgaaatggttgttcaaatatcactactct 49425919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 31703505 - 31703368
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||| |||| |||||||||    
T  31703505 actttctctctcatactcacattatcctcttattctctctcttcatttttg--tctccattgtttttaaccaatgaaaagagaga-aaaaaaagttgtca 31703409  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || ||| ||||||||||||| |||||||| ||||    
T  31703408 ccaaaaattgtataaaatggttgttcatatatcactcctct 31703368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 28253061 - 28253199
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||| | |    
T  28253061 tttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtta-c 28253159  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| | | | ||||||||||||||| ||| ||||||    
T  28253160 aaaagttgtctcatatggttgttcaaataacaccactctt 28253199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 8391365 - 8391227
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||        ||||||||| |||||| |||||||||||||||| ||||||| ||||||    
T  8391365 actttctttctcatacttacattatcctcttattctctctcttcatttttctctctccattatttttatccaatgaaaagagaga-aaaagaa-ttgtca 8391268  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || ||||||||||||||||| |||||||||||||    
T  8391267 ccaaaaattgtatgaaatggttgttcagatatcactactct 8391227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 31290232 - 31290097
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    ||||||||||||||||||||||| | |||||||||| ||||        ||||||||||||||||||||||||||| ||||| |||| ||||||||| ||    
T  31290232 ttctctctcatactcacattatctttttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtca-ca 31290134  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||| | ||||||||||||||||||||||| ||||    
T  31290133 aaagttgtgtgaaatggttgttcaaatatcaccactc 31290097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39010858 - 39010997
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||        ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  39010858 actttctctctcatactcacattatcctcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtca 39010957  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| | | | ||||||||||||||| |||||||||    
T  39010958 -caaaagttgtctcatatggttgttcaaataacactactct 39010997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 31480107 - 31480023
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||| |||||||||||||||||||||    
T  31480107 tccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactactc 31480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 36690599 - 36690461
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||| || | ||||        ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  36690599 actttctctctcatactcacattatcctcttattatccctcttcttttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtca 36690500  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||||||||||||||| ||||||||    
T  36690499 -caaaagttgtctcatatggttgttcaaataacactactc 36690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 36706700 - 36706562
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||| || | ||||        ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  36706700 actttctctctcatactcacattatcctcttattatccctcttcttttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtca 36706601  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||||||||||||||| ||||||||    
T  36706600 -caaaagttgtctcatatggttgttcaaataacactactc 36706562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 5304804 - 5304718
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||||| ||||||||||||||| ||||  |||||||||||||| || |||||||||||||||||||||||||||||||    
T  5304804 ctctccattgtttttaatcaatgaaaagagagaaaaaa--agttgtcaccaaaaattgtatgaaatggttgttcaaatatcactactct 5304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 46948029 - 46948162
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||| |||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |    
T  46948029 tctctcttactcacattatactcttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagatagagaaaagaagttgtca-caaga 46948127  T
Q  107 gttttatgaaatggttgttcaaatatcactactct 141  Q
    ||| | | |||||| ||||||||||||||||||||    
T  46948128 gttgtctcaaatggatgttcaaatatcactactct 46948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 52020451 - 52020307
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||| |||| |||| |||||||  ||||||| | |||| ||||||||     
T  52020451 actttctctctcatactcacattatcctcttattctctctcttcctttttctctcttcattattttcaaccaatagaaagaga-aaaaaaaaagttgtcg 52020353  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaa 146  Q
    | ||||||| |||||||||||||||||||||||||| |||| ||||    
T  52020352 ctaaaagttgtatgaaatggttgttcaaatatcactgctctattaa 52020307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50141962 - 50141827
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||| || ||||||    
T  50141962 actttctctctcatactcacattattctcttattctctctcttcttctttttctctccattgtttttgaccaatgaaaagagagagaaaataaattgtca 50141863  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
     |||||||| | | | || |||||||||||| |||||    
T  50141862 -caaaagttgtctcatatagttgttcaaataacacta 50141827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 7503562 - 7503644
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    |||| ||| ||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  7503562 tctctattatttttaaccaatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcact 7503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 30631820 - 30631733
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||| | | |||||||||||||||||||||||||||    
T  30631820 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-accaaaagttgtctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49453524 - 49453662
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || |||||||||| ||||         |||  ||||||||||||||||||||||||||| |||||   ||||||    
T  49453524 actttctctctcatactcacattatacttttattctctctcttcttttttctatctatattgtttttaaccaatgaaaagagagaaaaaag---ttgtca 49453620  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | ||||||| ||| |||| ||||||||||||||||||||||||    
T  49453621 c-aaaagttgtatcaaatagttgttcaaatatcactactcttt 49453662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22389552 - 22389411
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||| |||||||  |||||||||||| ||||         |||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  22389552 actttctctttcatacttacattattatcttattctctctcttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtca 22389453  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
     |||||| || || |||||||||||||||||||| |||||||||    
T  22389452 -caaaag-ttgatcaaatggttgttcaaatatcattactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28703152 - 28703013
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||| ||| | |||||  |||||||||||| ||||        ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  28703152 actttctctctcacacttatattattatcttattctctctcttcctttttttctctccaatgtttttaaccaatgaaaagagagagaaaataagttgtca 28703053  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | |||| || | | ||||||||||| || |||||||||||    
T  28703052 caaaaaattatctcaaatggttgttaaattatcactactc 28703013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 35846346 - 35846209
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| |||||||||||| ||||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  35846346 actttctttctcatactcacgttatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-a 35846248  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||| | | |||||||||||||||||| ||||||    
T  35846247 ccaaaagttgtctaaaatggttgttcaaatatgactact 35846209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 50659167 - 50659079
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| | | | ||||||||||||||| ||||||||||    
T  50659167 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtca-cataagttgtttcatatggttgttcaaataacactactctt 50659079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30439294 - 30439422
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||||        |||||||||| | |||||||||||||||||||| |||||   ||||||    
T  30439294 actttatctctcatactcacattatccttttattttctctcttcctttttctctctccattgatcttaaccaatgaaaagagagaaaaaag---ttgtca 30439390  T
Q  101 ccaaaagttttatgaaatggttgttcaaatat 132  Q
    ||||||||| ||| || |||||||||||||||    
T  30439391 ccaaaagttgtatcaattggttgttcaaatat 30439422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 37690464 - 37690575
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||   ||||||||||||||||||||||||||||||||| |    
T  37690464 tttctctctcatactcacattattctcttattctctctcttcatttttctctctccattgtt---aaccaatgaaaagagagagaaaagaagttgtca-c 37690559  T
Q  103 aaaagttttatgaaat 118  Q
    ||||||| ||| ||||    
T  37690560 aaaagttgtatcaaat 37690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37843459 - 37843320
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||        | ||||||||||||||||||||||||||||||| ||||    ||||||    
T  37843459 actttctctctcatactcacattatactcttattatctctcttcatttttctcactccattgtttttaaccaatgaaaagagagaaaaaaa---ttgtca 37843363  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |  ||| || ||| |||| |||||||||||||||||||||||||    
T  37843362 cacaaa-ttatatcaaatagttgttcaaatatcactactctttt 37843320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 2362466 - 2362551
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| ||||| || ||| |||| |||||||||||||||||||||    
T  2362466 ctctccattgtttt-aaccaatgaaaaaagagagaaaagaagttgtca-caaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 31436866 - 31437002
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||||||||||||||| | ||||        ||||||||||||||| ||||||||||  ||||| |||| || |||||| |    
T  31436866 tttctctctcatactcacattatcctcttattctccctcttcctttttctctctccattgtttttgaccaatgaaa--agagaaaaaataaattgtca-c 31436962  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| | | | ||||||||||||||| ||||||||||    
T  31436963 aaaagttatctcatatggttgttcaaataacactactctt 31437002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33675944 - 33676083
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtc 99  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||        |||||||||||||| |||||||||||| | | | |||| || ||||||    
T  33675944 actttctctctcatactcacattatactcgtattctctctcttcctttttctctctccattgttttaaaccaatgaaaaaaaaaaaaaaaaaaagttgtc 33676043  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    || ||||||||||| |||| ||||||||||||||| |||||    
T  33676044 ac-aaaagttttattaaatagttgttcaaatatcaatactc 33676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 36418178 - 36418251
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaat 130  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||||||    
T  36418178 tccattatttttaaccaatgaaaagagagagaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaat 36418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 366701 - 366842
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||||| || ||||        ||||||||||||||| ||||||||||||||||  |||| |||||||||    
T  366701 actttctctctcatactcacattatactcttattctatctcttcatgtttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtca 366800  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | | ||||| | | |  |||||||||||||| || ||||||||    
T  366801 c-ataagttgtctcatttggttgttcaaataacattactcttt 366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 5368016 - 5367936
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| |||||||||||||    
T  5368016 ctctacattgtttttacccaatgaaaagagagaggaaa-aagttgtcaccaaaaattgtatgaaatggatgttcaaatatca 5367936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5477190 - 5477074
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || |||||||||| |||         ||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  5477190 actttctctctcatactcacattattcttttattctctctctttctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtca 5477091  T
Q  101 ccaaaagttttatgaaat 118  Q
     |||||||| ||| ||||    
T  5477090 -caaaagttgtatcaaat 5477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 18959050 - 18959189
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag-agaaaagaagttgtcac 101  Q
    |||||||||||||||||||||||  |||||||||||| ||||        ||||||||||||||| |||||||||||||||| |||||| || |||||      
T  18959050 tttctctctcatactcacattattatcttattctctctcttc-cttttctctctccattgtttttgaccaatgaaaagagagaagaaaaaaaattgtc-g 18959147  T
Q  102 caaaagttttatgaaatggttgttc-aaatatcactactctt 142  Q
    ||||| || ||| |||||||||||| ||||||||||||||||    
T  18959148 caaaaattgtatcaaatggttgttcaaaatatcactactctt 18959189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23554795 - 23554928
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||        |||||||||||||||||||||||||| |||||| ||| || |||||||    
T  23554795 actttatctctcatactcacattatattcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaggagagaaaaatgaggttgtca 23554894  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
      |||  | |||  ||||||||||||||||||||    
T  23554895 tgaaagttgttagcaaatggttgttcaaatatca 23554928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1615080 - 1615222
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctcca-ttgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||        ||||||| |||||||| ||| ||||||||||||| || | ||||||||    
T  1615080 actttctttctcatactcacattatcctcttattctccctcttcatttttctctctccatttgttttttacctatgaaaagagagaaaatataagttgtc 1615179  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | |||||||| | | | ||||||||||||||| |||||| ||||    
T  1615180 a-caaaagttatctcatatggttgttcaaataacactacccttt 1615222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4637969 - 4638107
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| ||| | |||||||| |||||||||||| |||         ||| ||||||||||||   |||||||||||| | |||| || | ||||    
T  4637969 actttctctcttatatttacattatcatcttattctctctctttctttttctctcaccattgtttttattgaatgaaaagagaaaaaaaaaaaat-gtca 4638067  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  4638068 ccaaaagttgtatgaaatggttgttcaaatatcactactc 4638107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 51703086 - 51703002
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||||||||||||||||||||||| ||| |||| || || |||| ||||||| | |||||||||||||||||||||||||||    
T  51703086 ctctccattgtttttaaccaatgaaaaga-agaaaaaaaaaattatcac-aaaagttgtctgaaatggttgttcaaatatcactact 51703002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 10384586 - 10384672
Alignment:
Q  15 actcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  10384586 actcacattatactcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagtgagaaaagaagttgtcac 10384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25302670 - 25302536
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||| |||||||||||||||| |||||||||||||  |||        ||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  25302670 actttctcactcatactcacattatactcttattctctc--ttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 25302573  T
Q  101 ccaaaagttttatgaaatg-gttgttcaaatatcacta 137  Q
     || || || | | ||||| ||||||||||||||||||    
T  25302572 -cataaattgtctaaaatgagttgttcaaatatcacta 25302536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34187308 - 34187448
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||| ||||| |||||||||| || ||||        |||||||||| |||| ||||||||||||||||| || |||||||||||    
T  34187308 actttctctttcatactcatattatactcttattctatctcttcctttttctctctccattgattttgaccaatgaaaagagagaaaagagaagttgtca 34187407  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     || || || | | | |||||||||||||||||||| |||||    
T  34187408 -cataaattgtctcacatggttgttcaaatatcactcctctt 34187448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40596081 - 40595949
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| ||||||||||||||||| ||||    ||||||    
T  40596081 actttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaattattgtca 40595982  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
      ||| ||| ||| ||||||||||||||||||||    
T  40595981 -aaaaggttgtatcaaatggttgttcaaatatca 40595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 14002717 - 14002627
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| ||||||  ||||||| |||  |||| ||||||||||||||||||||||||    
T  14002717 ctctccattatttttaaccaatgaaaagagagaaaaatgaaattgtca-taaaagttgttagcaaatagttgttcaaatatcactactcttt 14002627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 32821681 - 32821811
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtcac 101  Q
    |||||||||||||||||||||||  ||||| |||||| |||         ||||||||||||||| ||||||||||||||||| ||| ||| |||||||     
T  32821681 tttctctctcatactcacattatattcttactctctctctttcttcttctctctccattgttttttaccaatgaaaagagaga-aaatgaatgttgtca- 32821778  T
Q  102 caaaagttttatgaaatggttgttcaaatatca 134  Q
     | ||||||||| ||||||||||||||||||||    
T  32821779 aataagttttatcaaatggttgttcaaatatca 32821811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 45740570 - 45740431
Alignment:
Q  2 ctttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||| ||||||||| ||||||||| || |||||| ||| ||||        ||||||||||||||| |||||||||||  |||| ||||||||||||||     
T  45740570 ctttttctctcatattcacattatgcttttattccctctcttcctttttctctctccattgtttttgaccaatgaaaattgagaaaaaagaagttgtca- 45740472  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||| || | | ||||| ||||||||||||||||||||||    
T  45740471 taaaaattatttcaaatgattgttcaaatatcactactctt 45740431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 25061777 - 25061909
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtc 99  Q
    ||||||||||||||||||| |||||  ||||| ||| || ||||        ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  25061777 actttctctctcatactcatattatattcttactctttctcttcctttttctctctccattgtttttaaccaatgaaaagagaga-aaaagaaggttgtc 25061875  T
Q  100 accaaaag-ttttatgaaatggttgttcaaatatca 134  Q
    |  || || || ||| ||||||||||||||||||||    
T  25061876 a--aatagattgtatcaaatggttgttcaaatatca 25061909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27352674 - 27352758
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  27352674 actttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 27352758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30530601 - 30530517
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||||||||    
T  30530601 actttctctctcatactcacattatatttttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagagaga 30530517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36930781 - 36930641
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtc 99  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||| |||||||||| ||||||| ||||||    
T  36930781 actttctctctcatactcacattatattcttactctctctcttc--ctttttctctccattgtttttgaccaataaaaagagaga-aaaagaaggttgtc 36930685  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |  ||| ||| ||  |||||||||||||||||||| | |||||||    
T  36930684 a-aaaaggttgtacaaaatggttgttcaaatatcattgctctttt 36930641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 45042311 - 45042387
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    ||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||    
T  45042311 tctctcatactcacattatactcttattctctctcttcctttttttctctccattgtttttgaccaatgaaaagaga 45042387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 48325803 - 48325656
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||| ||||||||||||||||| ||||||||||||| |||         | ||||||||||||| |||||| |||| ||||| |||| |||||||   |    
T  48325803 tttctatctcatactcacattatactcttattctctctctttctttttctccctccattgtttttgaccaataaaaaaagagaaaaaacaagttgt---c 48325707  T
Q  103 aaaagttttatgaaatg-gttgttcaaatatcactactc-ttttaaaatat 151  Q
    | ||||| | | ||||| ||||||||||||||||||||| |||||||||||    
T  48325706 ataagttgtctaaaatgagttgttcaaatatcactactcgttttaaaatat 48325656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 51571534 - 51571609
Alignment:
Q  63 tttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||| ||||||||||||||| |  |||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||    
T  51571534 tttttgaccaatgaaaagagaaa--aaagaagttgtcac-aaaagttgtattaaatggttgttcaaatatcacaactct 51571609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 16987543 - 16987624
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| ||||||||||||||||| ||| || |||||||   ||| | |||  ||||||||||||||||||||    
T  16987543 ctctccattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatca 16987624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20288366 - 20288225
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||| ||||  | |||||||||| ||||        ||||||||| ||||| | |||| ||||| |||| |||||||||||| |    
T  20288366 actttctctctcatactcacgttatgtttttattctctctcttcctttttctctctccattatttttgatcaataaaaagtgagaaaaaagaagttgt-a 20288268  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| | | ||||||||||||| ||||| ||| |||||    
T  20288267 tcaaaagttgtctaaaatggttgttcatatatctctaatcttt 20288225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 35043695 - 35043614
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| |||||||||||| |||||||||| ||| || |||||||  |||| | |||  ||||||||||||||||||||    
T  35043695 ctctccattatttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatca 35043614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 37947245 - 37947163
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||| |||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||||| ||||||||    
T  37947245 tttctctatcatactcacattatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgagaagagaga 37947163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 43640962 - 43640881
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| ||||||||||||||||| ||| || |||||||  |||  | |||  ||||||||||||||||||||    
T  43640962 ctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 43640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 17167896 - 17167977
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||| |||||||| |||||||||||| ||||        ||||| ||||||||| |||||||||||||||||    
T  17167896 ttctctctcatactaacattatcttcttattctctctcttcctttttctctctctattgttttttaccaatgaaaagagaga 17167977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25098812 - 25098731
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  25098812 ttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 25098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 46003514 - 46003628
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||| ||||| |||||||||||||||| |||||| ||||        ||||  ||| |||||||||||| ||||||||||||||||||||||||| |    
T  46003514 tttctctttcatattcacattatcctcttactctctctcttc--ctttttctctatattatttttaaccaat-aaaagagagagaaaagaagttgtcatc 46003610  T
Q  103 aaaagttttatgaaatgg 120  Q
    |||| || ||||| ||||    
T  46003611 aaaaattatatgacatgg 46003628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 7645526 - 7645443
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||||| |||||||||||||  ||||||||||||||| |  |||| || | | |||||| |||||||||||||||||||    
T  7645526 tctccattgtttttgaccaatgaaaaga--gagaaaagaagttgtta-aaaaaattgtctcaaatggatgttcaaatatcactactc 7645443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11121525 - 11121568
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  11121525 actttctctctcatactcacattatcttcttattctctctcttc 11121568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 21255760 - 21255679
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||||| |||||||| ||| || |||||||  ||||||| |||  ||||||||||||||||||||    
T  21255760 ctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtca-taaaagttgttagcaaatggttgttcaaatatca 21255679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 32966363 - 32966444
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||| ||| || ||||||| |||||||| |||  |||| |||||||||||||||    
T  32966363 ctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtca-caaaagttgttagtaaatagttgttcaaatatca 32966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34941947 - 34941848
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| | ||||  |||        ||||||||||||||| |||||| | |||||||||||| ||||||||||    
T  34941947 actttctctctcatactcacattatattcttactatctcttttcatttttctctctccattgtttttgaccaataagaagagagagaaatgaagttgtca 34941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31480146 - 31480109
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31480146 actttctctctcatactcacattgtcctcttattctct 31480109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38913631 - 38913737
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcactt-cgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||| |||||||| |||||||||| | ||| |        ||||| ||| ||||| |||||||||||||||||||||| ||||| ||    
T  38913631 actttctctctcatacttacattatcatcttattctccctctttcttttatttctctctattatttttgaccaatgaaaagagagagaaaataagttatc 38913730  T
Q  100 accaaaa 106  Q
    || ||||    
T  38913731 acaaaaa 38913737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40118740 - 40118699
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  40118740 tttctctctcatactcacattatcttcttattctctctcttc 40118699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 42829283 - 42829195
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||| ||||||||| |||||| | |||||||| || |   ||||||||||||| | |||| |||||||||| |||||||||||||||||    
T  42829283 ctctctattgttttttaccaataagaagagagaaaagaagggttgtcaccaaaattgttat-aaatggttgtacaaatatcactactctt 42829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 43105151 - 43105233
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||| |||||| |||||||||||| ||||        ||||||||| ||||| |||||| ||||||||||    
T  43105151 tttctctctcatactcatattatcttcttattctctctcttcatttttctctctccattatttttgaccaataaaaagagaga 43105233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 51168795 - 51168662
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||| |||||||||  ||||| |||||| ||||        |||||||||||||||||||||| | || ||||| |||| || ||||||    
T  51168795 actttttctctcatattcacattatattcttactctctctcttcttttttctctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtca 51168696  T
Q  101 ccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
      ||||||| |||  ||||||||||||||||||||    
T  51168695 -taaaagttgttagcaaatggttgttcaaatatca 51168662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 16836089 - 16836041
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||| ||||||||||||  ||| |||||||||||||||    
T  16836089 ctctccattgtttttgaccaatgaaaagtaagaaaaaagaagttgtcac 16836041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 29638762 - 29638802
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  29638762 ttctctctcatactcacattatcttcttattctctctcttc 29638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 42843319 - 42843231
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||| | |||||||| |||  | ||||||||||||| | | || || ||| ||| ||||||||||||||||    
T  42843319 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatcactactct 42843231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 48872475 - 48872569
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    ||||||||||||||| ||||||||||||||||| ||| ||| |||||||  | | ||| ||| |||||||||||||||||||| | ||||| |||||    
T  48872475 ctctccattgtttttgaccaatgaaaagagaga-aaaggaaggttgtca-aataggttgtatcaaatggttgttcaaatatcattgctcttataaaa 48872569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 48962033 - 48962073
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  48962033 ttctctctcatactcacattatcttcttattctctctcttc 48962073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5574283 - 5574248
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5574283 ttctctctcatactcacattatcttcttattctctc 5574248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5959432 - 5959516
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||| |   |||||||||||| |||||       ||||||||||||||| |||||| | ||||||||    
T  5959432 actttctctctcatactcacatgagattcttattctctctcttcgtttctctctctccattgtttttgaccaataagaagagaga 5959516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 12990493 - 12990458
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12990493 ttctctctcatactcacattatcttcttattctctc 12990458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18541078 - 18541035
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||    
T  18541078 actttctctctcatattcacattatcttcttattctctctcttc 18541035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 29094770 - 29094735
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  29094770 ttctctctcatactcacattatcttcttattctctc 29094735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35030789 - 35030705
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||| |||||||| |||||||||||| |||         ||||||||||||||| |||||| |||| |||||    
T  35030789 actttctctctcatacttacattatcttcttattctctctcttactttttcactctccattgtttttgaccaataaaaaaagaga 35030705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 37516008 - 37516093
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | ||||||||||||||||||||| |||| ||||||||| ||  | || | | || |||||||||||||||||||||||    
T  37516008 ctctccattatatttaaccaatgaaaagagaga-aaaaaaagttgtca-cagtaattgtctcaagtggttgttcaaatatcactactc 37516093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48256951 - 48256994
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||    
T  48256951 actttctctctcatattcacattatcttcttattctctctcttc 48256994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 50226906 - 50226768
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||| |||||| |||||||| | || ||||        ||||||||||||||| |||||| ||| |||||| |||| ||||| |||    
T  50226906 actttctctctcatactcgcattatactcttattatatctcttc-tttttctctctccattgttttttaccaataaaatgagagaaaaaataagttatca 50226808  T
Q  101 ccaaaagttttatgaaatgg-ttgttcaaatatcactactc 140  Q
    | | ||||| | | |||||  ||||||||||||||||||||    
T  50226807 c-ataagttgtctaaaatgaattgttcaaatatcactactc 50226768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50460739 - 50460696
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||    
T  50460739 actttctttctcatactcacattatcttcttattctctctcttc 50460696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 4604579 - 4604665
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag 94  Q
    |||||||||||||||||||  |||||  ||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||||    
T  4604579 tctctcatactcacattatattcttacgctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga-aaaagaag 4604665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21728261 - 21728223
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  21728261 actttctctctcatactcatattatcttcttattctctc 21728223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30196758 - 30196796
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  30196758 actttctctctcatactcacattatattcttattctctc 30196796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34157563 - 34157601
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  34157563 actttatctctcatactcacattatcttcttattctctc 34157601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39815390 - 39815428
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  39815390 actttctctctcatactcacattatattcttattctctc 39815428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 44730740 - 44730820
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||| |||||||||||||||||||| ||||| ||||||| |||||||  ||| ||| ||  ||||||||||||||||||||    
T  44730740 ctctcctttgtttttaaccaatgaaaaaagaga-aaaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 44730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 47059865 - 47059784
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| ||||||||||||||||| |||| ||| ||||||  |||  | |||  ||||||||||||||||||||    
T  47059865 ctctccattgtttttgaccaatgaaaagagaga-aaaataagattgtcatgaaagttgttagcaaatggttgttcaaatatca 47059784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 48390101 - 48390067
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  48390101 ttctctctcatactcacattatcttcttattctct 48390067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 50528078 - 50527992
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag 94  Q
    |||||||||||||||||||  ||||| |||||  ||||        ||||||||||||||| ||||||||||||||||| ||||||||    
T  50528078 tctctcatactcacattatattcttactctctttcttcctttttctctctccattgtttttgaccaatgaaaagagaga-aaaagaag 50527992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 1788365 - 1788328
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  1788365 tctctcatactcacattatcttcttattctctctcttc 1788328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 5383855 - 5383936
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||| ||||||||||| ||||| |||||||||| |||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  5383855 ctcttcattgtttttagccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatggatgtacaaatatca 5383936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 8464538 - 8464497
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  8464538 tttctctctcatactcacattatattcttattctctctcttc 8464497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 11460890 - 11460970
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| ||||| |||||| |||||| |||||||  | |||||||  ||||||| ||| |||| |||||||||||||||    
T  11460890 ctctccattatttttgaccaataaaaagaaagagaaagaaggttgtcaa-aaaagttgtatcaaattgttgttcaaatatca 11460970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 14247708 - 14247845
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||| |||  ||||||| |||| ||||          ||||||||||||| | ||||||||| ||| | || |||||||||||    
T  14247708 actttctctctcatactcacactatgttcttattttctctcttccttttcctacctccattgtttttgatcaatgaaaaaagaaaaaatagaagttgtca 14247807  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |    |||| ||| ||||||||||||||||| || ||||||    
T  14247808 c---gagttatatcaaatggttgttcaaataccattactct 14247845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 31427932 - 31427844
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| ||||| |||||||||||  || | ||||||| ||||||  ||||||| | | ||||  ||||||||||||||||||||||    
T  31427932 ctctccattatttttgaccaatgaaaaatgaaaaaaaagaaattgtcat-aaaagttgtttaaaataattgttcaaatatcactactctt 31427844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 32196684 - 32196721
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctca 40  Q
    ||||||||||||||||||||| || |||||||||||||    
T  32196684 tttctctctcatactcacattttcttcttattctctca 32196721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 44672055 - 44672022
Alignment:
Q  3 tttctctctcatactcacattatcctcttattct 36  Q
    |||||||||||||||||||||||| |||||||||    
T  44672055 tttctctctcatactcacattatcttcttattct 44672022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 46907081 - 46907125
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||    
T  46907081 ctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 46907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 48689602 - 48689643
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  48689602 tttctctctcatactcacattatcttcatattctctctcttc 48689643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49596279 - 49596316
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||  |||||||||||    
T  49596279 actttctctctcatactcacattatattcttattctct 49596316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 50061951 - 50061906
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||| |||||||||| | |||| |||||||||||||||||||||||    
T  50061951 ctcttcattgtttttgatcaataaaaagagagagaaaagaagttgt 50061906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 50436241 - 50436304
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaat 118  Q
    ||||| ||||||||||||||||||||| |||||  ||||||||||||| |||||||| ||| ||||    
T  50436241 ctctctattgtttttaaccaatgaaaa-agagaataaagaagttgtca-caaaagttgtatcaaat 50436304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12972728 - 12972688
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||| || |||||||||||| ||||    
T  12972728 ttctctctcatactcacattttcttcttattctctctcttc 12972688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 28716287 - 28716327
Alignment:
Q  102 caaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  28716287 caaaagttgtctcaaatggttgttcaaatatcactactctt 28716327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 29264099 - 29264139
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaa 93  Q
    |||||||||| |||| |||||| ||||||||||||||||||    
T  29264099 ctctccattgattttgaccaataaaaagagagagaaaagaa 29264139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30414911 - 30414951
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  30414911 ttctctctcatactcacattatcttcttattttctctcttc 30414951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 31493976 - 31494028
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||| || |||||||||| || | |||||||||||||| ||||    
T  31493976 tctccattgtttttgactaatgaaaagaaagggtaaagaagttgtcacaaaaa 31494028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 43612057 - 43612025
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  43612057 ctctccattgtttttgaccaatgaaaagagaga 43612025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 48028622 - 48028654
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||| ||||||||    
T  48028622 ctctccattgtttttaaccaatgagaagagaga 48028654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 51339675 - 51339643
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  51339675 ctctccattgtttttgaccaatgaaaagagaga 51339643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 52233246 - 52233210
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  52233246 tttctctatcatacttacattatcctcttattctctc 52233210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 103)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 34473995 - 34474137
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtcac 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  34473995 tttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagagaaaaagaagttgtcac 34474094  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  34474095 caaaagttgtatgaaatggttgttcaaatatcattactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21648958 - 21648819
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  21648958 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccaatgtttttaaccaatgaaaagagagagaaaataagttgtca 21648859  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | | ||||||||||| ||||||||||||||    
T  21648858 ccaaaagttgtctcaaatggttgttaaaatatcactactc 21648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 32174998 - 32175141
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtc 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||| |||| | |||||||| |||||||||    
T  32174998 actttctctctcatactcacattatcctcttattctctctcttcatttttctctctccattgtttttaaccaataaaaaaaaagagaaaaagaagttgtc 32175097  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  32175098 accaaaagttgtatgaaatggttgttcaaatatcattactcttt 32175141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45101440 - 45101586
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||        | |||||||||||||| |||||||||||||||| |||| |||||||||    
T  45101440 actttctctctcatactcacattatcctcttattccctctcttcctttttctccctccattgtttttatccaatgaaaagagagaaaaaa-aagttgtca 45101538  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  45101539 ccaaaagttgtatgaaatggttgttcaaatatcactactctattaaaa 45101586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30925681 - 30925541
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||        ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  30925681 actttctctctcatattcacattatcctcttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaa-aagttgtca 30925583  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| ||| ||||||||||||||||||||||||||||    
T  30925582 ccaaaagttgtataaaatggttgttcaaatatcactactctt 30925541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 42543506 - 42543367
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||||        |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  42543506 actttctttctcaaactcacattatcctcttattctctctcttc--ctttttctctccattgtttttagccaatgaaaagagagaaaaaagaagttgtca 42543409  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  42543408 ccaaaagttgtatgaaatggttgttcaattatcactactctt 42543367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11879517 - 11879377
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||| |||||||||||| |||||||||| ||| |||||||| |    
T  11879517 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgtta 11879418  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || |||||||||||| ||||||||||||||||||    
T  11879417 ccaaaaattgtatgaaatggtttttcaaatatcactactct 11879377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11896933 - 11896793
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||| |||||||||||| |||||||||| ||| |||||||| |    
T  11896933 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgtta 11896834  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || |||||||||||| ||||||||||||||||||    
T  11896833 ccaaaaattgtatgaaatggtttttcaaatatcactactct 11896793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 28927731 - 28927864
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    ||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  28927731 tctctcatactcacattattctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtca-caaaa 28927829  T
Q  107 gttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||| ||||||||||||||||||||| |||||    
T  28927830 attttatcaaatggttgttcaaatatcaccactct 28927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 37101661 - 37101574
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  37101661 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactc 37101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3650157 - 3650296
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||        ||||||| | |||||||||||||||||||||||||||| || ||||||    
T  3650157 actttctctctcatactcatattatcctcttattctctttcttcctttttctctctccaatatttttaaccaatgaaaagagagagaaaataaattgtca 3650256  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | | ||||||||||| ||||||||||||||    
T  3650257 ccaaaagttatctcaaatggttgttaaaatatcactactc 3650296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 14029268 - 14029130
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||  ||||||||||||||||||||| |||| ||||         |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  14029268 tttctctcttttactcacattatcctcttattatctctcttcttttttctttctccaatgtttttaaccaatgaaaagagagagaaaataagttgtcacc 14029169  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||| | | ||||||||||| |||||||||||||||    
T  14029168 aaaagttgtctcaaatggttgttaaaatatcactactct 14029130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28570434 - 28570300
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||| ||||||||||||||| |||| ||||        ||||||||| |||||||||||||||||||||||  |||||| ||||||    
T  28570434 actttatctctcatactcgcattatcctcttattttctctcttcatttttctctctccattatttttaaccaatgaaaagagaga--aaagaaattgtca 28570337  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  28570336 ccaaaagttgtatgaaatggttgttcaaataccacta 28570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28578027 - 28577893
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||| ||||||||||||||| |||| ||||        ||||||||| |||||||||||||||||||||||  |||||| ||||||    
T  28578027 actttatctctcatactcgcattatcctcttattttctctcttcatttttctctctccattatttttaaccaatgaaaagagaga--aaagaaattgtca 28577930  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  28577929 ccaaaagttgtatgaaatggttgttcaaataccacta 28577893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41406883 - 41406749
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||| ||||| ||||||||| |||| || || |||    
T  41406883 actttctctctcatactcacattatcctcttattctctctcttcatttttctctctccattgtttttaatcaatgtaaagagagaaaaaaaaa-ttatca 41406785  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||||||| ||| |||||||| |||||||||||||    
T  41406784 ccaaaagttatataaaatggttattcaaatatcact 41406749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 23258076 - 23258217
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || ||||||| || ||||        || |||||||||||| ||||||||||||||||| ||||||||||||||    
T  23258076 actttctctctcatactcacattatactattattctatctcttcctttttctctttccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 23258175  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     ||||| || | | |||||||||||||||||||||||||||||    
T  23258176 -caaaaattgtttcaaatggttgttcaaatatcactactcttt 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 7678778 - 7678914
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||||||||||||||||||||| |||||||||||| | |    
T  7678778 tttctctctcatactcacattatatttttattctctctcttcctttttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtta-c 7678876  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||| ||| |||| ||||||||||||||| |||||    
T  7678877 aaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38576453 - 38576586
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||| |||||||||||||||||||||  ||         ||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  38576453 actttctctttcatactgacattatcctcttattctctctatttcttcttctctctccattgtttttagtcaatgaaaagagaaagaaaataagttgtca 38576552  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| | ||||||||||||||||||||||    
T  38576553 ccaaaagttgtttgaaatggttgttcaaatatca 38576586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 42768147 - 42768006
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||||||||||||||||  ||||        |||||||||||||||| |||| ||||| ||| | |||| || |||||||     
T  42768147 tttctctctcatactcacattatcctcttattctctttcttcctttttctctctccattgtttttatccaacgaaaaaagaaaaaaaaaaaattgtcact 42768048  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||| || ||||||||| ||||||||||||||||||||||||    
T  42768047 aaaaattgtatgaaatgtttgttcaaatatcactactctttt 42768006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40102067 - 40102205
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||        ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  40102067 actttctctctcatacttacattattctcttattctctctcttcctttttctctctccatttttttttaccaatgaaaagagagagaaaataagttgtca 40102166  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | ||||||||||||||| ||||||||    
T  40102167 -caaaagttgtctcatatggttgttcaaataacactactc 40102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5502404 - 5502548
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaag--agagagaaaagaagttgt 98  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||        ||||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  5502404 actttctctctcatattcacattattatcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagatagagagagaagaagttgt 5502503  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    || ||||| || ||| ||||| ||||||||||||||||||||||||    
T  5502504 ca-caaaaattatatcaaatgattgttcaaatatcactactctttt 5502548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 20473876 - 20473960
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||| ||||||||||||||||||||    
T  20473876 tctccattgtttttaaccaatgaaaagagagagaaaataa-ttgtcactaaaagttatatgaaatagttgttcaaatatcactact 20473960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 426145 - 426245
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  426145 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 426244  T
Q  101 c 101  Q
    |    
T  426245 c 426245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 41344693 - 41344554
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||| ||||| ||||||||||||| |||         ||||||||||||||| |||||||||||||||||||||||||||| |||  |    
T  41344693 ttctctctcatactcatattatactcttattctctctcttattttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttatca-ta 41344595  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    | |||| | | |||||| |||||||||||||||||||||||    
T  41344594 agagttgtctcaaatggatgttcaaatatcactactctttt 41344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 42012617 - 42012475
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctc--cattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||||||||||||||||||| ||||| |||||||||||| | ||        |||||  |||||||||||||||||||||||||||||||||||||||||    
T  42012617 actttctctctcatactcacgttatcatcttattctctctcatcttttttctctctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 42012518  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||| |||| || | |  |||||||||| ||||||||||||||||    
T  42012517 cactaaaaattgtct-taatggttgttgaaatatcactactctt 42012475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 44103809 - 44103951
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagag-aaaagaagttgtc 99  Q
    ||||||||||||||||||||||||||||||| |||| || ||||         |||||||||| |||||||||||||||||||||| |||| ||||| ||    
T  44103809 actttctctctcatactcacattatcctcttgttctatctcttcctttttctttctccattgtgtttaaccaatgaaaagagagagaaaaaaaagttatc 44103908  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | ||| |||| | | |||||||||||||||||||||||||||||    
T  44103909 a-caatagttatcttaaatggttgttcaaatatcactactcttt 44103951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 9963731 - 9963864
Alignment:
Q  3 tttctctc-tcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||| |||||||||||||||||||||||| | || ||||        || |||||||||||||||||||||||||||||| |||| ||||| |||     
T  9963731 tttctctcatcatactcacattatcctcttattttatctcttcatttttctctttccattgtttttaaccaatgaaaagagaga-aaaaaaagttatcat 9963829  T
Q  102 caaaagttttatgaaatggttgttcaaatatcact 136  Q
    |||||||| ||| ||||||||||||||||||||||    
T  9963830 caaaagttgtataaaatggttgttcaaatatcact 9963864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 21273731 - 21273598
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||  | ||||| |||| ||||        ||||| ||||||||||||||||||||||||||| || | ||||||||| |||||    
T  21273731 tctctcatactcacattatgtttttattatctctcttcttttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtca-caaaa 21273633  T
Q  107 gttttatgaaatggttgttcaaatatcactactct 141  Q
    ||| |||||||| ||||||||||||||||||||||    
T  21273632 gttgtatgaaatagttgttcaaatatcactactct 21273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28473572 - 28473475
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28473572 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaaagaagttgt 28473475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 7325759 - 7325895
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        |||||||||||||||| ||||||||||| |||| |||| || |||| |    
T  7325759 actttctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgttttta-ccaatgaaaagtgagaaaaaataatttgt-a 7325856  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||||| | | |||||||||||||||||||||||||    
T  7325857 ccaaaagttatctaaaatggttgttcaaatatcactact 7325895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 40413338 - 40413250
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||| || |||||||||||||| |||||||||| |||  ||||||| ||| ||||||||||||||||||||||||||||    
T  40413338 ctctccattgtttttgactaatgaaaagagagaaaaaagaagttatcat-aaaagttgtatcaaatggttgttcaaatatcactactctt 40413250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 22767178 - 22767303
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||||| |||||||||||  |||        ||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  22767178 tttctctctcatactcacattatccccttattctctc--ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca-c 22767274  T
Q  103 aaaagttttatgaaatggttgttcaaata 131  Q
    ||||||| | | | | |||||||||||||    
T  22767275 aaaagttgtctcatacggttgttcaaata 22767303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 3988955 - 3989089
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    ||||||||||||||||||| ||||||||||||| |||         ||||||||||||||| || |||||||||||||| ||||||||||||||| | ||    
T  3988955 tctctcatactcacattatactcttattctctctctttatttttctctctccattgtttttgactaatgaaaagagagaaaaaagaagttgtcac-ataa 3989053  T
Q  107 gttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||| | | |  |||||||||||||| ||||||||||    
T  3989054 gttgtctcatttggttgttcaaataacactactctt 3989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 16011942 - 16011816
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||| |||||||||  | |||||||||| ||||        ||||||||||||||||||||||||||||||||| ||||||| |||||| |    
T  16011942 tttctctctcatattcacattatatttttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaaattgtca-c 16011844  T
Q  103 aaaagttttatgaaatggttgttcaaat 130  Q
    |||| || ||| |||| |||||||||||    
T  16011843 aaaaattatattaaatagttgttcaaat 16011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 295590 - 295731
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||||| |||| ||||        ||||| ||||||||| ||||||||||| ||||| |||| || ||||||    
T  295590 actttctctctcatactcacattattttcttattatctctcttcctttttctctctctattgtttttgaccaatgaaaatagagaaaaaataaattgtca 295689  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| | | |||| |||||||||||| |||||||||||    
T  295690 -caaaagttatctcaaatagttgttcaaataacactactcttt 295731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24946046 - 24946182
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||   ||| ||||||| |    
T  24946046 actttctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgag---aaaaaagttgt-a 24946141  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| | | |||||||||||||||||||||| ||||    
T  24946142 ccaaaagttgtctaaaatggttgttcaaatatcactgctct 24946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 11223834 - 11223747
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||| | | ||| | |||||||||||||||||||||    
T  11223834 ctctccattgttttttaccaatgaaaagtgagaaaaaagaagttgt-accaaaagttgtctcaaaagattgttcaaatatcactactct 11223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 44672208 - 44672125
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||| ||| ||||  |||||||||||||||||    
T  44672208 ctctccattgtttttaaccaatgaaaagagagaaaaaagaatgtgtca-caaaagttgtatcaaataattgttcaaatatcacta 44672125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21418619 - 21418519
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        |||||||||| ||||||||||| |||||| ||| |||| |||||||||    
T  21418619 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgattttaaccaataaaaagatagaaaaaataagttgtca 21418520  T
Q  101 c 101  Q
    |    
T  21418519 c 21418519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37524455 - 37524316
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| || ||||||| ||  |||        ||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  37524455 actttctctcacatactcacattatacttttattctttctattcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtca 37524356  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||| ||| | | |||| | ||||||||||||||||||||    
T  37524355 -caaaggttatttcaaatagatgttcaaatatcactactct 37524316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6243078 - 6243161
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||    
T  6243078 actttctctctcatactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagag 6243161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22836166 - 22836083
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||    
T  22836166 actttctctctcatactcacattatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 22836083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 42689881 - 42689963
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactac 138  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||  |||  |||| |||||||||||||||||||    
T  42689881 ctctccattgtttttaaccaatgaaaagagagaaaaaagaaattgtca-caaaag--ttaacaaatagttgttcaaatatcactac 42689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 26871093 - 26871188
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||| |||||||||| |||||||| |||| ||||        ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  26871093 ttctctctcattctcacattatactcttattatctctcttc--ttttttctctccattgtttttgaccaatgaaaagagagagaaaagaaattgtcac 26871188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 38128501 - 38128418
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    |||| |||||||||| |||||||||||| |||| |||||||||||||| ||||| || | | |||||||||||||||||||||||    
T  38128501 ctcttcattgtttttgaccaatgaaaagtgagaaaaaagaagttgtca-caaaaattgtttaaaatggttgttcaaatatcacta 38128418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 43290837 - 43290754
Alignment:
Q  63 tttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaa 146  Q
    ||||||||||||||||||||||  ||||||| ||||||  |||| || |||||||||  |||| ||||||||||||||||||||    
T  43290837 tttttaaccaatgaaaagagaggaaaaagaaattgtcataaaaaattatatgaaatgagtgtttaaatatcactactcttttaa 43290754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9047097 - 9046960
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||| || ||||||| ||||||||||  | |||||       ||||||||| |||||||||||| |||||||| |||||| ||  |||||    
T  9047097 actttctctctcatccttacattatactcttattctaactcttcgtttttctctctccattatttttaaccaataaaaagaga-agaaaaaaaaatgtca 9046999  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | |||| || ||| |||| |||||||||||||||||||||    
T  9046998 caaaaa-ttgtatcaaatagttgttcaaatatcactactc 9046960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37471687 - 37471770
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||    
T  37471687 actttctctctcgtactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagag 37471770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43590738 - 43590821
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||||| ||||||||||||  |||        ||||||||||||||| ||||||||||||||||    
T  43590738 actttctctctcatactcacattatcttcttattctctcttttcttttttctctctccattgtttttgaccaatgaaaagagag 43590821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 38844766 - 38844685
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| | ||||||||||||||| |||||||  |||| | |||  ||||||||||||||||||||    
T  38844766 ctctccattgtttttgaccaataagaagagagagaaaagaggttgtcataaaaattgttaacaaatggttgttcaaatatca 38844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42047381 - 42047479
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||||||||||| |||||||| |||| ||||        ||||| ||||||||| |||| | |||||||||| |||||||||||||||    
T  42047381 tttctctctcatactcacattatactcttattttctctcttcttttttctctctcgattgttttttaccattaaaaagagagaaaaaagaagttgtcac 42047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 1179472 - 1179559
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| | ||||||||| ||| | |||| ||||||||| |||||||| ||| |||| |||||| |||||||||||||||    
T  1179472 ctctccattgttttttatcaatgaaaaaagaaaaaaaaaaagttgtca-caaaagttatatcaaatagttgtttaaatatcactactct 1179559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 6004988 - 6005120
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| ||||||||||||||||| ||   |||||||||    
T  6004988 actttctctctcatactcacattatattcttactctctctcttcctttttttctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtca 6005087  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
      | ||||| ||  ||||||||||||||| ||||    
T  6005088 -aataagttgtaccaaatggttgttcaaacatca 6005120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26507931 - 26507830
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgttttta-accaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||         || ||||||||||||  ||||||||||||||||| |||||||||||||    
T  26507931 actttctctctcatactcatattatactcttattctctctctttatttttttctttccattgttttttgaccaatgaaaagagagaaaaaagaagttgtc 26507832  T
Q  100 ac 101  Q
    ||    
T  26507831 ac 26507830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 39719217 - 39719129
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||| ||||||||| |||| |||| |  ||||||| ||||||||||||||| || | | ||||||||||| |||||||||||||||    
T  39719217 ctctccaatgtttttaatcaataaaaataaggagaaaataagttgtcaccaaaaattgtctcaaatggttgttaaaatatcactactct 39719129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 5359434 - 5359520
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| |||||| |||||||||| ||||||  |||||| |||||||| | | |||| | |||||||||||||||||||    
T  5359434 ctctccattgtttttgaccaataaaaagagagaaaaaagagattgtca-caaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 9738718 - 9738620
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||||||||||||||||||||| ||||||||||  |||        |||||||||| |||| |||||| |||| ||||| ||||||| |||||||    
T  9738718 tttctctctcatactcacattatccttttattctctcttttcctctttctctctccattgattttgaccaataaaaaaagagaaaaaagaaattgtcac 9738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42716364 - 42716442
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaa 79  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||| ||||    
T  42716364 actttctctctcatactcacattatcttcttattctctctcttcatttttctctctccattgtttttgaccaataaaaa 42716442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 24503013 - 24503096
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||| ||||||||| ||||||||||||||||| ||| ||||||||||  ||||||| | | |||||||| |||||||| |||||    
T  24503013 ctctctattgtttttgaccaatgaaaagagagaaaaatgaagttgtca-taaaagttgtctcaaatggttattcaaataacacta 24503096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27836224 - 27836324
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||| |||| ||||||||||| ||| ||||||||||||  ||||        ||||| |||  |||| ||||||||||||||||||||||||||||||||    
T  27836224 acttactctttcatactcacactatactcttattctctttcttcatttttctctctctattaattttgaccaatgaaaagagagagaaaagaagttgtca 27836323  T
Q  101 c 101  Q
    |    
T  27836324 c 27836324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 29910239 - 29910096
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| |||||||||||||||  ||||||||| || ||||        ||||| |||||||| ||||||||| |||||||| || | |||||||||    
T  29910239 actttctctttcatactcacattatattcttattctttctcttcctttctctctctctattgttttgaaccaatgagaagagagaaaataaaagttgtca 29910140  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
     |||| ||| |   ||||||||||  | |||||||||||||||||    
T  29910139 acaaa-gttgtcaaaaatggttgtcaatatatcactactctttta 29910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 42941662 - 42941572
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| ||| |||||||| ||||| |||| ||||||||||||||| |||| | || | ||||  ||||||||||||||||||| ||||    
T  42941662 ctctccattatttctaaccaataaaaagtgagaaaaaagaagttgtcacaaaaaatatt-tcaaattattgttcaaatatcactactttttt 42941572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 154386 - 154475
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||| ||||||||| |||||| |||||||||| ||   |||||||||| || |||| | | || ||||||||||||||||||||||||||    
T  154386 ctctctattgtttttgaccaataaaaagagagaaaatgaaagttgtcac-aatagttgtcttaattggttgttcaaatatcactactcttt 154475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9550434 - 9550396
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  9550434 actttctctctcatactcacattatcttcttattctctc 9550396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 41703363 - 41703499
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| | ||||||||||||| || ||||| |||| ||||        ||||| ||| ||||||||||||||||||||| | ||||    || |||    
T  41703363 actttctcttttatactcacattattcttttattatctctcttcctttttctctctctattatttttaaccaatgaaaagagaaaaaaaa----ttatca 41703458  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || ||| |||||| ||||||||||||||| ||||    
T  41703459 ccaaaaattatataaaatgggtgttcaaatatcactcctct 41703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 42996558 - 42996604
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  42996558 ctctccattatttttgaccaatgaaaagagagaaaaaagaagttgtc 42996604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 43587687 - 43587830
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||| ||  | |||||||||| ||||        |||||||||| |||| |||||| |||||||||| |||  |||||||||||    
T  43587687 tttctctctcatactcacatgatgttgttattctctctcttcctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcacc 43587786  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactcttttaa 146  Q
    |||  | | || |||||| | | ||||||||| | |||||||||    
T  43587787 aaagttgtcattaaatggatatacaaatatcattgctcttttaa 43587830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 896003 - 896048
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  896003 ctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgt 896048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 3206432 - 3206351
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| |||||| |||||||||| |||  | |||||||| |||| | | || |||||||||||||||||||| |||||    
T  3206432 attgtttttgaccaattaaaagagagaaaaagtatgttgtcacaaaaattatcatcaaatggttgttcaaatatcattactc 3206351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7279953 - 7279916
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7279953 actttctctctcatactcacattatcttcttattctct 7279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 38504266 - 38504347
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||| |||  || |||||||||||| | | || |||||| ||| |||||||||    
T  38504266 ctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatca 38504347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 4148679 - 4148639
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  4148679 ttctctctcatactcacattatcttcttattctctctcttc 4148639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 7129629 - 7129716
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| |||||||| |||||| | |||||||| |||  ||||||||| |||| ||| |||||||||  ||| ||||||||||||||||    
T  7129629 ctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaa-gttgtatgaaatgaatgtacaaatatcactactct 7129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 9985702 - 9985662
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  9985702 ttctctctcatactcacattatcttcttattctctctcttc 9985662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 34838294 - 34838254
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  34838294 ttctctctcatactcacattatcttcttattctctctcttc 34838254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 37294641 - 37294681
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  37294641 ttctctctcatactcacattatcttcttattctctctcttc 37294681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13924055 - 13924098
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||    
T  13924055 actttctctctcatgctcacattatcttcttattctctctcttc 13924098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14233671 - 14233587
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||| ||||||| |||||||||||| |||         | ||||||||||||| |||||||| ||||||||    
T  14233671 actttctctctcatactcgcattatcttcttattctctctctttctttttctcgctccattgttttttaccaatgagaagagaga 14233587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 23709023 - 23709103
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||| |||||||||||||||||| |||||||||||| ||||        ||||| |||||| || ||||||||||||||||    
T  23709023 ttctatctcatactcacattatcttcttattctctctcttcctttttctctctctattgttcttgaccaatgaaaagagag 23709103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27300390 - 27300433
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||    
T  27300390 actttctctctcatattcacattatcttcttattctctctcttc 27300433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27630941 - 27630984
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  27630941 actttctctctcatactcacattatattcttattctctctcttc 27630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30578298 - 30578402
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| |||||||||||| ||||  ||||| |||||| ||||        ||||||||||||||| |||||||| |||||||| ||| || |||||||    
T  30578298 actttctttctcatactcacgttatattcttactctctctcttcttttttctctctccattgtttttgaccaatgataagagagaaaaaggaggttgtca 30578397  T
Q  101 ccaaa 105  Q
     ||||    
T  30578398 tcaaa 30578402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35818981 - 35819024
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  35818981 actttctctctcatactcacattatctttttattctctctcttc 35819024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37210076 - 37210033
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  37210076 actttctctctcatactcacattattatcttattctctctcttc 37210033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 43602392 - 43602317
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  43602392 attgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 43602317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 43605677 - 43605642
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43605677 ttctctctcatactcacattatcttcttattctctc 43605642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1179438 - 1179476
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  1179438 actttctctctcattctcacattattctcttattctctc 1179476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 9895102 - 9895192
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||| ||||||||||||||||||||||| ||  || ||| |||  |||  | |||  |||||||||||||||||||| || |||||    
T  9895102 ctctccattatttttaaccaatgaaaagagagaaaagggaggttatcatgaaagttgttagcaaatggttgttcaaatatcattagtcttt 9895192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32777929 - 32777967
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  32777929 actttctctcttatactcacattatcttcttattctctc 32777967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 33817253 - 33817334
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||| |||| ||| ||||||| |||| | ||||||||| | ||| |||||||||    
T  33817253 ctctccattgtttttgaccaataaaaagagaga-aaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatca 33817334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38174260 - 38174222
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  38174260 actttctctctcatactcacattatattcttattctctc 38174222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 11180354 - 11180395
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  11180354 tttctctctcatactcacattatattcttattctctctcttc 11180395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23265381 - 23265344
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  23265381 actttttctctcatactcacattatcttcttattctct 23265344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 1796579 - 1796611
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  1796579 ctctccattgtttttgaccaatgaaaagagaga 1796611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 11089683 - 11089763
Alignment:
Q  63 tttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||||||| |||| ||||| |||  ||||||||||||||| | | || |||||| ||| ||||||||| | ||||||    
T  11089683 tttttaaccaatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcttt 11089763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 18550026 - 18550066
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  18550026 ttctctctcatactcatattatcttcttattctctctcttc 18550066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 20995082 - 20995042
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||| |||||||| |||||||||||| ||||    
T  20995082 ttctctctcatacttacattatcttcttattctctctcttc 20995042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 22852813 - 22852761
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||| || ||||||||| |||| ||||||| ||||||| ||||    
T  22852813 tctccattgtttttgacaaatgaaaagtgagaaaaaagaaattgtcacaaaaa 22852761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25430693 - 25430733
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  25430693 ttctatctcatactcacattatcttcttattctctctcttc 25430733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 26294235 - 26294271
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||| |||||||||||||| |||||||||||||    
T  26294235 tttctctcacatactcacattatactcttattctctc 26294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 26307492 - 26307528
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||| |||||||||||||| |||||||||||||    
T  26307492 tttctctcacatactcacattatactcttattctctc 26307528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 34494663 - 34494627
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34494663 tttctctctcatactcacgttatcttcttattctctc 34494627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44672244 - 44672208
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  44672244 tttctctctcatactcacattatactcttattttctc 44672208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6861 - 6999
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||| ||||||||     
T  6861 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagagaaaa-aagttgtcg 6959  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  6960 ccaaaagttgtataaaatggttgttcaaatatcactactc 6999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9954592 - 9954735
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  9954592 actttctctctcatacttacattatcctcttattctctctcttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaagttgtca 9954691  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||    
T  9954692 ccaaaagttgtattaaatggttgttcaaatatcactcctctttt 9954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32853171 - 32853033
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  32853171 actttctctctcatactcacattatactcttattctctctcttcttttttctctctcaattgtttttaaccaatgaaaaaagagaaaaaagaagttgtca 32853072  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     ||||| || ||| |||| |||||||||||||||||||||    
T  32853071 -caaaaattgtatcaaatagttgttcaaatatcactactc 32853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28549048 - 28548907
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||||||| | |||| |||||||||||| ||||        ||||||||||||||||||||||||||||||| | |||| |||||||||    
T  28549048 actttctctatcatactcatactatcatcttattctctctcttcttttttctctctccattgtttttaaccaatgaaaagagaaaaaaaaaaagttgtca 28548949  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| ||| ||||||||||||||||| || |||||||    
T  28548948 ccaaaagttgtataaaatggttgttcaaataacattactctt 28548907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 32253826 - 32253966
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagag-aaaagaagttgtcac 101  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||        |||||||||||||||||||||||||||||||||| |||| || ||||||     
T  32253826 tttctctctcatactcacattatactcttattccctctcttcatttttctctctccattgtttttaaccaatgaaaagagagagaaaaaaaaattgtca- 32253924  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||| ||  |||| ||||||||||||||||||||||||    
T  32253925 caaaagttgtaccaaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29383601 - 29383701
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||         ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29383601 actttctctctcatactcacattatactcttattctctcactttctttttccctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 29383700  T
Q  101 c 101  Q
    |    
T  29383701 c 29383701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 16337094 - 16336955
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||||||||   ||||||| |||| ||||        ||||||||||||||| |||||||||||||||||||| ||||||||||| ||    
T  16337094 ttctctctcatactcacattacattcttattatctctcttcatttttctctctccattgtttttgaccaatgaaaagagagagaatagaagttgtca-ca 16336996  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    | |||| | | |||||| ||||||||||||| |||||||||    
T  16336995 agagttgtctcaaatggatgttcaaatatcattactctttt 16336955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30906690 - 30906549
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||| |||| ||||||||||||| ||||        || |||||| |||||||||||| |||||||||||||||||| ||||||    
T  30906690 actttatctctcatactcacgttatactcttattctctctcttccttttcctctttccattatttttaaccaataaaaagagagagaaaagaaattgtca 30906591  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
      || |||| | | |||||| ||||||||||||||||||||||    
T  30906590 -taagagttgtttcaaatggatgttcaaatatcactactcttt 30906549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 25166723 - 25166818
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaatat 151  Q
    |||| |||||||||||||||||||||||||||| |||||   ||||||| |||| || ||||||||||||||| ||||||||||||||| ||| |||||    
T  25166723 ctcttcattgtttttaaccaatgaaaagagagaaaaaag---ttgtcacaaaaaattgtatgaaatggttgtttaaatatcactactctcttagaatat 25166818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 34021197 - 34021057
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||| |||||    |||||||||| ||||        ||||| ||||||||| |||||||||||||||||||||||||||||| |      
T  34021197 tttctctctcatactcatattatatctttattctctctcttcctttttccctctctattgtttttgaccaatgaaaagagagagaaaagaagttgtta-a 34021099  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||| | | |||||| |||||||||||||||||||||||    
T  34021098 aaaagttgtctcaaatggatgttcaaatatcactactctttt 34021057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 24437490 - 24437628
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||| ||||| ||||||| || | ||||        |||||||||||||||||||||| |||| |||| ||||| ||||||||| |    
T  24437490 tttctctctcatactcacgttatcttcttattttcactcttcctttttctctctccattgtttttaaccaataaaaaaagag-gaaaaaaagttgtcatc 24437588  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||| || ||| |||||||||||||||||| | |||||||    
T  24437589 aaaaattatatcaaatggttgttcaaatataattactctt 24437628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1897730 - 1897871
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||  |||||| ||||||| ||||||||||||| |||         |||| |||||||||| ||||||||||||||||| |||||| |||||||    
T  1897730 actttctcttacatacttacattatactcttattctctctcttactttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtca 1897829  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| | | |||| | ||||||||||||||||||||||    
T  1897830 -caaaagttgtttcaaatagatgttcaaatatcactactcttt 1897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31517207 - 31517067
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||        |||||||||| | ||||||||| |||||||||| ||||||||||||||    
T  31517207 actttttctctcatactcacattatactcttattctctctcttcctttttctctctccattgatcttaaccaataaaaagagagaaaaaagaagttgtca 31517108  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     || ||||| | | |  | |||||||||||| ||||||||||    
T  31517107 -cataagttgtctcatttagttgttcaaataacactactctt 31517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 2163737 - 2163833
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||| |||||||||| |||||||||| ||||        ||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  2163737 tttctctctcatacttacattatccttttattctctctcttcctttttctctctccaatgtttttaaccaatgaaaagagaaagaaaataagttgtc 2163833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 2175370 - 2175466
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||| |||||||||| |||||||||| ||||        ||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  2175370 tttctctctcatacttacattatccttttattctctctcttcctttttctctctccaatgtttttaaccaatgaaaagagaaagaaaataagttgtc 2175466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 24752337 - 24752412
Alignment:
Q  63 tttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||| |||||||||||| |||| |||||||||||| |||||||||| | | |||||||||||||||||||||||||    
T  24752337 tttttgaccaatgaaaagtgagaaaaaagaagttgt-accaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 26378360 - 26378273
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||| ||| |||||||||||  |||| |||||||||||| | |||||||| | | |||||||||||||||||||||||||||    
T  26378360 ctctccattgtctttgaccaatgaaaaatgagaaaaaagaagttgt-atcaaaagttgtctaaaatggttgttcaaatatcactactct 26378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 19713038 - 19713181
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||   ||  | ||||||     
T  19713038 actttctctctcatactcacgttatcttcttattctctctcttcttttttctctctccattgttttttaccaatgaaaagagagcacaacaaggttgtc- 19713136  T
Q  101 ccaaaagtt-ttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| || | |||  ||||||||||||||| |||||||||    
T  19713137 ccaaaagttgttgtaaaaaagttgttcaaatatcattactctttt 19713181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31480861 - 31480763
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||        |||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  31480861 actttttctctcatactcacattatactcttattctttctcttc--ctttttctctccattgattttaaccaataaaaagagagaaaaaagaagttgtca 31480764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 2582758 - 2582847
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| | ||||||||||||||| |||||| ||||||| |||||||| | | |||| | |||||||||||||| |||||||    
T  2582758 ctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaccactcttt 2582847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22422194 - 22422335
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| || ||||| ||||||||  ||  ||||||| |    
T  22422194 actttctctctcatactcacattatcttcttattctctctcttcttttttctctctccattgtttttgactaatgagaagagagaacaacaaagttgt-a 22422292  T
Q  101 ccaaaagtttta-tgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| ||   ||||  |||||||||||||| |||||||    
T  22422293 ccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 22492004 - 22491917
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatg-gttgttcaaatatcactactct 141  Q
    |||||||||| |||| |||||| |||||||||| ||||||||||||||| | ||||||| | ||||| ||||||||||||||||||||||    
T  22492004 ctctccattgcttttgaccaatcaaaagagaga-aaaagaagttgtcac-ataagttttctaaaatgagttgttcaaatatcactactct 22491917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 32457277 - 32457179
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||| |||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||| ||||| |||||| ||| ||||    
T  32457277 tttctctcacatactcacattatactcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaggttatcac 32457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9395364 - 9395281
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||||| |||||||    
T  9395364 actttctctttcatactcacattatcttcttattctctctcttcttttttctctctccattgtttttgaccaatgataagagag 9395281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7693359 - 7693500
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        ||||||||||||||  |||||| | |||||||| || | || ||||||    
T  7693359 actttctctctcatactcacattatattcttattctctctcttcctttttctctctccattgttttggaccaataagaagagagaaaataaaaattgtca 7693458  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     | |||||| |   |||||||||| || |||||||||||||||    
T  7693459 tc-aaagttgtcccaaatggttgtacatatatcactactcttt 7693500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 10521176 - 10521307
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||||| ||||||||||  ||         || |||||||||||||| ||||||||| | |    ||| ||||| |||||||||    
T  10521176 tctctcatactcacattatccttttattctctctttttctttttctctttccattgtttttaatcaatgaaaaaaaa----aaaaaagttatcaccaaaa 10521271  T
Q  107 gttttatgaaatggttgttcaaatatcactactctt 142  Q
     || ||| |||| |||||||||||||||||||||||    
T  10521272 attatataaaatagttgttcaaatatcactactctt 10521307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 1688348 - 1688268
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatc 133  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||  | || | | |  |||||||||||||||||||    
T  1688348 ctctccattgtttttaaccaataaaaagagaggaaaaagaagttgtcaagataattgtcaaaaaatggttgttcaaatatc 1688268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11785399 - 11785541
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctct--ccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||| ||||||| |||||||||  |||||||||||| ||||        ||||  ||||||||||| |||||| |||| ||||| |||| |||||||    
T  11785399 actttctatctcatattcacattatattcttattctctctcttcctttttctctctatccattgtttttgaccaataaaaaaagagaaaaaacaagttgt 11785498  T
Q  99 caccaaaagttttatgaaatg-gttgttcaaatatcactactct 141  Q
    || || ||||| | | ||||| ||||||||||||||||||||||    
T  11785499 ca-cataagttgtctaaaatgagttgttcaaatatcactactct 11785541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 12151880 - 12151800
Alignment:
Q  5 tctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||| | ||||||||    
T  12151880 tctctctcatactcacattatcttcttattctctctcttcatttttctctctccattgtttttgaccaataagaagagaga 12151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 3180030 - 3179896
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||| ||| |||||||||| | |||||||||| ||||        |||||||||| ||||||||||| |||||||| | |||| || ||||||    
T  3180030 actttatctcttatattcacattatcattttattctctctcttcctttttctctctccattgcttttaaccaataaaaagaga-aaaaaataaattgtca 3179932  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    | |||| || ||| ||||| || |||||||||||||    
T  3179931 caaaaaattatataaaatgattattcaaatatcact 3179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8395386 - 8395424
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8395386 actttctctctcatactcacattattctcttattctctc 8395424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21506380 - 21506418
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21506380 actttctctctcatactcacattatcttcttattctctc 21506418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23633350 - 23633206
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||| ||||        ||||| ||||||||  ||||||||||| ||||| || | |||||||||    
T  23633350 actttctctctcatactcacattatattcttattctctctcttc--ctttttctctctattgttttggaccaatgaaaaaagagaaaataaaagttgtca 23633253  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
     ||||| || |  |||||||||||  | ||||||| ||||||| ||||    
T  23633252 acaaaa-ttgtcagaaatggttgtcaatatatcaccactctttgaaaa 23633206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 10628360 - 10628397
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa 90  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10628360 ctctccattgattttaaccaatgaaaagagagagaaaa 10628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 11017478 - 11017566
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||| | ||||||||||||  | |||||||| |||  | ||||| ||||| ||| ||||||||||| ||||    
T  11017478 ctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcactgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 1803965 - 1804056
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||| |||||| | |||||||| |||  | ||||||||||||  | | || || ||| ||| |||||||||||||||||||    
T  1803965 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctttt 1804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15098782 - 15098825
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||    
T  15098782 actttctctctcatactcacgttatcttcttattctctctcttc 15098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19789103 - 19789060
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  19789103 actttctctctcatactcacattatagtcttattctctctcttc 19789060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25561967 - 25561924
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  25561967 actttatctctcatactcacattatcttcttattctctctcttc 25561924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25924891 - 25924787
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| ||  | |||||| ||| ||||        ||||||||||||||| |||||| |||||||||  |||  |||||||||    
T  25924891 actttctctctcatactcacatgatgttattattcgctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 25924792  T
Q  101 ccaaa 105  Q
    |||||    
T  25924791 ccaaa 25924787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26101481 - 26101438
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  26101481 actttatctctcatactcacattatcttcttattctctctcttc 26101438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30253340 - 30253297
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  30253340 actttctctctcatactcacattatattcttattctctctcttc 30253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32149533 - 32149670
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||  ||||||| | ||||||| || ||||        |||||||||||||||| |||||||||  | ||| |||| || || |||    
T  32149533 actttctctctcatacttccattatcattttattctttctcttcctttttctctctccattgtttttatccaatgaaa--aaagaaaaaaaaaattatca 32149630  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||| || |||||||||| |  |||||||||| |||||    
T  32149631 ccaaaaattatatgaaatggataatcaaatatcaatactc 32149670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1196091 - 1196129
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  1196091 actttctctctaatactcacattatactcttattctctc 1196129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 2241753 - 2241711
Alignment:
Q  102 caaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||    
T  2241753 caaaagttgtatcaaatggttgttcaaatatcactattctttt 2241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 15328585 - 15328666
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||  |||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  15328585 ctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 15328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 15364755 - 15364836
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||  |||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  15364755 ctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 15364836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 25554390 - 25554419
Alignment:
Q  115 aaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||||||||||||||||||    
T  25554390 aaatggttgttcaaatatcactactctttt 25554419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 27790256 - 27790219
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  27790256 tctctcatactcacattatcttcttattctctctcttc 27790219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 6435135 - 6435219
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||||||| | |||||||| |||  | ||||||||||||| | | || || ||| ||| |||||| ||||||||    
T  6435135 tccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaataccactactc 6435219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 16533235 - 16533203
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  16533235 ctctccattgttttttaccaatgaaaagagaga 16533203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 28965815 - 28965763
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||| |||||||||| |||||| ||||||||||||||  ||||| ||||||||    
T  28965815 ctcttcattgtttttgaccaatcaaaagagagagaaacaaagttatcaccaaa 28965763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32135458 - 32135422
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctc 37  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  32135458 actttctctatcatactcacattatcttcttattctc 32135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 33720123 - 33720190
Alignment:
Q  69 accaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
    |||||||||| | |||| ||||||| |||| ||||||| || | | |||||||||||||||||||||||    
T  33720123 accaatgaaaggtgagaaaaaagaaattgt-accaaaaattatctaaaatggttgttcaaatatcacta 33720190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40842449 - 40842589
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtc 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||  ||||||||| |||||||||    
T  40842449 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaaatgagagaaaaagaagttgtc 40842548  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  40842549 accaaaagttgtatgaaatggttgttcaaatatcattactc 40842589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 19426624 - 19426758
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||| |||||| |||||||||||||||| |||| |||||||||    
T  19426624 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattatttttatccaatgaaaagagagaaaaaa-aagttgtca 19426722  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    ||||||||| ||||||||||||||||||||||||||    
T  19426723 ccaaaagttgtatgaaatggttgttcaaatatcact 19426758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 47425010 - 47424877
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||| ||||||||| ||||| || ||||||||    
T  47425010 tttctctctcatactcacattatcctcttattatctctcttcctttttctctctccattgtttttaaccaataaaaagagag-gaaaaaaaattgtcacc 47424912  T
Q  103 aaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||| |||||||||||||||||||||||||||    
T  47424911 aaaagttgtatgaaatggttgttcaaatatcacta 47424877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7807099 - 7807240
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnn-ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||         ||| ||||||||||||||||||||||||||  |||||||||||||||    
T  7807099 actttttctctcatactcacattattctcttattctctctcttccttttttctctcaccattgtttttaaccaatgaaaagag--agaaaagaagttgtc 7807196  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | |||||||| |||||||||||||||||||||||||||||||||    
T  7807197 atcaaaagttgtatgaaatggttgttcaaatatcactactcttt 7807240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 22330658 - 22330519
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||||| || ||||        |||||||||||||||| |||||||||||||||| |||| |||||||||    
T  22330658 actttctctctcatactcacattattctcttattctttctcttcctttttctctctccattgtttttatccaatgaaaagagagaaaaaa-aagttgtca 22330560  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||| || |||||||||||||||||||||||||| ||||    
T  22330559 ccaaaaattatatgaaatggttgttcaaatatcactgctct 22330519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37352017 - 37351877
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| |||||| |||||||||| ||||||| ||||||    
T  37352017 actttctctctcatactcacattattctcttattctctctcttcttttttctctctccattgtttttgaccaataaaaagagagaaaaaagaaattgtca 37351918  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| ||| ||||| ||||||||||||||||||||||    
T  37351917 -caaaagttatatcaaatgattgttcaaatatcactactctt 37351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 12102736 - 12102610
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  12102736 actttctctctcatactcatattatcttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtca 12102637  T
Q  101 ccaaaagttttatgaaatggttgttcaa 128  Q
     |||||||| | ||||||||||||||||    
T  12102636 -caaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 34349052 - 34348914
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||   ||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||| |      
T  34349052 tttctctctcatactcacattatatccttattctctctcttcctttttctctctccattgttttttaccaatgaaaagagagagaaaagaagttgtta-a 34348954  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| |||||||| | |||||||||||||||||||||    
T  34348953 aaaagttgtatgaaatagatgttcaaatatcactactctt 34348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 43260086 - 43260175
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  43260086 tctccattgtttttaaccaattaaaagagagagaaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatgactactctt 43260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2790221 - 2790360
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        | || |||||||||| ||||||||||||||||||||||||||||||||    
T  2790221 actttctctctcatactcacattatactcttattctctctcttcctttttctcacttcattgtttttgaccaatgaaaagagagagaaaagaagttgtca 2790320  T
Q  101 ccaaaagttttatgaaatg-gttgttcaaatatcactactc 140  Q
     || ||||| | | ||||| |||||||||||||||||||||    
T  2790321 -cataagttgtctaaaatgagttgttcaaatatcactactc 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33684724 - 33684863
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||        ||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  33684724 actttctctctcatactcacattatcctcttattctttctcttcttttttctctctccattgttttttaccaatgaaaagatagaaaaaagaagttgtca 33684823  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| | | | || |||||||||||| |||||||||    
T  33684824 -caaaagttgtttcatatagttgttcaaataacactactct 33684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25887627 - 25887765
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||| |||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  25887627 actttctctctcatactcacaatatgtttttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-a 25887725  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | | ||||||||||||||||||||||||||    
T  25887726 ccaaaagttgtctaaaatggttgttcaaatatcactactc 25887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 40717209 - 40717127
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||| |||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40717209 cattatttttaaccaataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 40717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 46651716 - 46651858
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || |||||||||| | ||        ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  46651716 actttctctctcatactcacattatacttttattctctctcatcatttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtca 46651815  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
     ||| | || ||| | ||||||||||||||||||||||||||||    
T  46651816 -caagaattgtatcatatggttgttcaaatatcactactctttt 46651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 28596973 - 28597057
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa--gaagttgtcaccaaaagttttatgaaatggttgttcaaatatcac 135  Q
    ||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||| |||||||||||||||||||||||||    
T  28596973 ctctccattgtttttaaccaatgaaaagagagaaaaaaaagaatttgtcaccaaaagttgtatgaaatggttgttcaaatatcac 28597057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 32154574 - 32154435
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||| ||| ||||||||||||||||| ||| ||||        |||||||||||||||||  ||||||||||||    ||| |||||||||    
T  32154574 actttatctctcacacttacattatcctcttattccctctcttccttttgctctctccattgtttttaattaatgaaaagaga----aaaaaagttgtca 32154479  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  32154478 ccaaaagttgtatgaaatggttgttcaaatatcactaccctttt 32154435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 45607068 - 45607208
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||| ||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  45607068 actttctctctcatactcacattatgtttttattcactctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-a 45607166  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| | | |||| |||||||||||||||||||||||    
T  45607167 ccaaaagttatctaaaatagttgttcaaatatcactactctt 45607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 36990085 - 36990221
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||| | |||||||||| ||||        ||||||||| |||||||||||| |||| ||||| ||||  | ||||||    
T  36990085 actttctctctcatactcacattatcatattattctctctcttcctttttctctctccattatttttaaccaataaaaaaagagaaaaaa--atttgtca 36990182  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    | |||| || |||||||||||||||||||||||||||||    
T  36990183 caaaaaattatatgaaatggttgttcaaatatcactact 36990221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 48866957 - 48866815
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| ||| ||||||||| ||||        ||||||||||||||| || |||||||||||||| |||||| |||||||    
T  48866957 actttctctcacatactcacattatactcctattctctctcttcctttttctctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtca 48866858  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
     |||||||| | | |||| | |||||||||||||||||||||||    
T  48866857 -caaaagttgtttcaaatagatgttcaaatatcactactctttt 48866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 156008 - 155868
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||| ||||||| ||||||||||||  ||| |||||||||||| |    
T  156008 actttctctctcatactcacattatgtttttattctctctcttcctttttctctctccactgtttttgaccaatgaaaagtaagaaaaaagaagttgt-a 155910  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| | | ||||||||||||||||||||||||||||    
T  155909 tcaaaagttgtctaaaatggttgttcaaatatcactactctt 155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 5978625 - 5978761
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||| ||||||||||||||| ||  ||||||||| ||||        ||||||||||||||| ||||||||||||||||| || ||||||||||| |    
T  5978625 tttctctttcatactcacattatacttgtattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtca-c 5978723  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    || |||| ||| | ||||||||||||||||||||||||    
T  5978724 aagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 7390789 - 7390669
Alignment:
Q  13 atactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtttta 112  Q
    |||||||||| |||||||||||||||  ||||        ||||||||| ||||||| |||| |||||||||| |||||||||||||||||||| || ||    
T  7390789 atactcacatcatcctcttattctctttcttcatttttctctctccattatttttaatcaataaaaagagaga-aaaagaagttgtcaccaaaaattgta 7390691  T
Q  113 tgaaatggttgttcaaatatca 134  Q
    ||||||||||||||||||||||    
T  7390690 tgaaatggttgttcaaatatca 7390669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 27778113 - 27778245
Alignment:
Q  2 ctttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||| ||||| ||||||||||||| ||||||||||||| ||||        |||||||||||||||||||||      |||||| |||| || |||||||    
T  27778113 ctttatctctgatactcacattattctcttattctctctcttcctttttctctctccattgtttttaaccaa------gagagaaaaaaaaa-ttgtcac 27778205  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  27778206 caaaagttatatgaaatggttgttcaaatatcactactct 27778245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 47193023 - 47193116
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  47193023 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-accaaaagttatctaaaatggttgttcaaatatcactact-ttttaaaa 47193116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5378671 - 5378809
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |  |||||||||| ||||        ||||||||||||||| ||||||||||||||||||||||||| |||| |    
T  5378671 actttctctctcatactcacattataccattattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaaattgtta 5378770  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
      ||||||| | | |||||| |||| ||||||||||||||    
T  5378771 -aaaaagttgtctcaaatggatgtttaaatatcactactc 5378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8792624 - 8792485
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||        |||  |||||||||| || |||||||||||||| |||||   ||||||    
T  8792624 actttttctctcatactcacattattctcttattctctctcttcctttttctctcaacattgtttttgactaatgaaaagagagaaaaaag---ttgtca 8792528  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    | ||||||| ||| |||||||||||||||||||| |||||||||    
T  8792527 c-aaaagttgtatcaaatggttgttcaaatatcattactctttt 8792485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 44894449 - 44894363
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || | | |||||| |||||||||||||||||||    
T  44894449 ctctccattgttttttaccaatgaaaagagagataaaagaagttgtca-caaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 4182502 - 4182588
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
    ||||||| | |||||||||||| ||||||||||||||| |||||||||||||||||| | | ||||||||||| |||||||| ||||    
T  4182502 ctctccaatatttttaaccaataaaaagagagagaaaataagttgtcaccaaaagttatcttaaatggttgttaaaatatcattact 4182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21752702 - 21752840
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||        || |||||||||||| ||||||||||||||||| |||| || ||||||    
T  21752702 actttatctctcatactcacattattctcttattctctctcttctttcttctctttccattgtttttgaccaatgaaaagagagaaaaaataaattgtca 21752801  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | || |||||||||||| ||||||||    
T  21752802 -caaaagttgtttcatattgttgttcaaataacactactc 21752840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 12141986 - 12142066
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  12141986 attgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcac-aaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 21839160 - 21839023
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| |||||||| |||| |||         ||||||||||||||||||||||||||| ||||| |||| || |||| |    
T  21839160 actttatctctcatactcacattatactcttattatctctctttctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataaattgtta 21839061  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
     ||||| || ||| |||| ||||||||||||||||||||    
T  21839060 -caaaaattgtatcaaatagttgttcaaatatcactact 21839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41254820 - 41254910
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaag 91  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||| ||||||||||||||||||||||||||| |||||    
T  41254820 actttctctctcatactcacattatactcttattctctctcttcctttttccctctctattgtttttaaccaatgaaaagagagaaaaaag 41254910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 37392087 - 37392220
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  ||||||| |||| ||||        ||||||||||||||||||||||||||||||||| ||| || |||||||    
T  37392087 actttatctctcatactcacattatattcttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtca 37392186  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
      |||  | |||  ||||||||||||||||||||    
T  37392187 tgaaagttgttagcaaatggttgttcaaatatca 37392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 43657061 - 43657186
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||| ||||||||||||||||||||||| ||||        ||||||||||||||||  ||||||||||||||||||||                
T  43657061 tttctctctcatattcacattatcctcttattctctctcttcctttttctctctccattgtttttattcaatgaaaagagagagaaaa------------ 43657148  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
      ||||| ||||||||||||||||||||||||||||||||    
T  43657149 --aagttgtatgaaatggttgttcaaatatcactactctt 43657186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 10591250 - 10591334
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||||| |||||||||| | |||| ||||||||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  10591250 tctccattgttttttaccaatgaaa-gtgagaaaaaagaagttgtcac-aaaagttgtctcaaatggttgttcaaatatcactactc 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7077780 - 7077647
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||| ||||  | ||||||| || ||||        |||||||||||||||||||||||||||| |||  |||| |||||||||    
T  7077780 actttctctctcatactcacgttatgtttttattctttctcttcatttttctctctccattgtttttaaccaatgaaaagtgaggaaaaaaaagttgtca 7077681  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcac 135  Q
     |||||||| | | |||| ||||||||||||||||    
T  7077680 -caaaagttgtttaaaatagttgttcaaatatcac 7077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 19510384 - 19510231
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| | |||||||||||||| |||||||| | ||||        ||||||||||||||| | ||||||||||||||| |||| ||||||| |    
T  19510384 actttctctcttaaactcacattatccttttattctccctcttcctttttctctctccattgtttttgatcaatgaaaagagagaaaaaataagttgtta 19510285  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaatatgtat 155  Q
     |||||||| | | | ||| ||||||||||| |||||||||| | ||| ||||||    
T  19510284 -caaaagttgtcttatatgattgttcaaataacactactcttgttaaaaatgtat 19510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 22331235 - 22331155
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| ||||||||||||||||    
T  22331235 ttctctctcatactcacattatcttcttattctctctcttcctttttctctctccattgttttttaccaatgaaaagagag 22331155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 30180551 - 30180690
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||| |||| ||||||||| ||||||||||||| ||||        ||||||||||||||| ||| ||||||||||||| |||||| ||||||     
T  30180551 actttatctcacatattcacattatactcttattctctctcttcctttttctctctccattgtttttgacccatgaaaagagagaaaaaagaggttgtc- 30180649  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     ||||| || | | |||| | ||||||||||||||||||||    
T  30180650 gcaaaaattgtttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 46148216 - 46148343
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||  |||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||  | ||||| |  |||     
T  46148216 tctctcatactcacattatattcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaataaggttgttatgaaag 46148315  T
Q  107 gttttatgaaatggttgttcaaatatca 134  Q
     | |||  ||||||||||||||||||||    
T  46148316 ttgttaacaaatggttgttcaaatatca 46148343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 6353824 - 6353912
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagag-agaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||| |||||||||||||||||||||| |||| | ||||||| |||||| |||||||| ||| |||| ||| ||||||||||||||||||    
T  6353824 ctcttcattgtttttaaccaatgaaaaaagagaaaaaaagaaattgtca-caaaagttgtatcaaatagtttttcaaatatcactactct 6353912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17039201 - 17039283
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        |||| |||||||||| |||||||||||||||    
T  17039201 actttctctctcatactcacattatcttcttattctctctcttcatttttctctctgcattgtttttgaccaatgaaaagaga 17039283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 31982108 - 31982190
Alignment:
Q  8 ctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaa 90  Q
    |||||||||||||||||| |||||||| |||| ||||        ||||||||||||||| ||||||||||||||||||||||    
T  31982108 ctctcatactcacattatactcttattttctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaa 31982190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 21858846 - 21858929
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||||| | |||||||||| || | |||||||||| |||| ||||||| | | ||||||||||||||||||||||||||    
T  21858846 tccattgtttttgatcaatgaaaagtgaaaaaaaagaagttatcac-aaaagttgtttaaaatggttgttcaaatatcactactc 21858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 35165196 - 35165142
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt 109  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  35165196 ctctccattgtttttaaccaatgaaaa-agagagaaaa-aagttgtcaccaaaagtt 35165142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 42204751 - 42204658
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagtt 96  Q
    |||||||||||||||| |||||| || |||||||||| ||||        |||| |||||||||| ||||||||||||||||| ||||||||||    
T  42204751 tttctctctcatactcgcattatacttttattctctctcttcctttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaagtt 42204658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 43213354 - 43213451
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||        ||||||||| ||||| | |||| |||| ||||| ||||||||||||||    
T  43213354 tttctctctcatactcacattatactcttattctctctcttcatttttctctctccattatttttgatcaataaaaaaagagaaaaaagaagttgtca 43213451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39875836 - 39875736
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| ||| ||||| ||||||||||||| |||         |||| |||||||||| ||||||||||||||||| ||||||| ||||||    
T  39875836 actttctctctcatattcatattatactcttattctctctctttctttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaaattgtca 39875737  T
Q  101 c 101  Q
    |    
T  39875736 c 39875736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 2414159 - 2414241
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactac 138  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| || || || | | || | |||||||||||||||||||    
T  2414159 ctctccattgtttttaaccaatgaaaagagagag--aagaagttgtca-cataaattgtctcaactagttgttcaaatatcactac 2414241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 4678109 - 4678240
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||  ||||| |||||| | ||        ||||||||||||||| ||||||||||| ||||| ||| || ||||||| |    
T  4678109 tttctctctcatactcacattatattcttactctctctcatcctttttctctctccattgtttttgaccaatgaaaatagagaaaaaggaggttgtcatc 4678208  T
Q  103 aaaagttttatgaaatggttgttcaaatatca 134  Q
    |||  | |||  ||||||||||| ||||||||    
T  4678209 aaagttgttagcaaatggttgtttaaatatca 4678240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 28110051 - 28110132
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| ||||||||||||||||||||| || || ||||  ||||||| |||  ||||||||||||||||||||    
T  28110051 ctctccattgtttttgaccaatgaaaagagagagaaatgaggtcgtca-taaaagttgttagcaaatggttgttcaaatatca 28110132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 10656729 - 10656774
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    |||||||||||||| || ||||||||||||||||||||||||||||    
T  10656729 tctccattgtttttgactaatgaaaagagagagaaaagaagttgtc 10656774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 18157210 - 18157128
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  18157210 tttctctctcatactcacattatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 18157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 30862686 - 30862772
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaa 93  Q
    ||||||||||||||||||| ||||||||||||| ||||        ||||||||| ||||| |||||| |||||||||| |||||||    
T  30862686 tctctcatactcacattatactcttattctctctcttcctttttctctctccattatttttgaccaataaaaagagagaaaaaagaa 30862772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 43079659 - 43079515
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaa-aagagagagaaaagaa--gttg 97  Q
    |||||||||||||||||||||||||  ||||| | |||| ||||        ||||||||||||||| ||||||||  || |||||||||||||  ||||    
T  43079659 actttctctctcatactcacattatattcttactttctctcttcctttttctctctccattgtttttgaccaatgatgaaaagagagaaaagaaaggttg 43079560  T
Q  98 tcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||  | ||||||||  |||||||||||||||||||| | ||||||    
T  43079559 tcaa-ataagttttaccaaatggttgttcaaatatcattgctcttt 43079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 28862072 - 28862024
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||    
T  28862072 ctctccattgtttttaaccgatgaaaagagggaaaaaagaagttgtcac 28862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 37856156 - 37856070
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| ||||||||||||||||| ||||||  || ||| |||||||| | | |||| | |||| ||||||||||||||    
T  37856156 ctctccattgtttttgaccaatgaaaagagagaaaaaagagattatca-caaaagttgtttcaaatagatgtttaaatatcactactc 37856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40108168 - 40108211
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  40108168 actttctctctcatactcacattatcttcttattctctctcttc 40108211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 45432040 - 45432125
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatg-gttgttcaaatatcactact 139  Q
    ||||||||||||||| |||||| |||| ||||| ||||||||||||||| | ||||| | | ||||| ||||||||||||||||||||    
T  45432040 ctctccattgtttttgaccaataaaaa-agagaaaaaagaagttgtcac-ataagttgtctaaaatgagttgttcaaatatcactact 45432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 43445519 - 43445592
Alignment:
Q  69 accaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||| |||||| ||| ||||||| ||||||| |||| || ||| ||||| |||||||||||||||||||||||    
T  43445519 accaataaaaagaaagaaaaaagaaattgtcacaaaaa-ttgtatcaaatgattgttcaaatatcactactcttt 43445592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 43025903 - 43025948
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  43025903 ctctccgttgtttttaaccattgaaaagagagaaaaaagaagttgt 43025948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 49142542 - 49142501
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  49142542 tttctctctcatactcacattatcttcttattctctctcttc 49142501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 10014930 - 10014842
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| |||||| |||||||||| |||  || |||||||||||  | | || || ||| ||| ||||||||||||||||    
T  10014930 ctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 10014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30447407 - 30447447
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  30447407 ttctctctcatactcacattatactcttattctctctcttc 30447447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 33465064 - 33465028
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33465064 tttctctctcatactcacattatcttcttattctctc 33465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41910209 - 41910169
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  41910209 ttctctctcatactcacattatcttcttattctctctcttc 41910169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 41966424 - 41966511
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||| |||||||||| |||||| ||||  |||| ||||||||||||||  |||| || | | |||| ||||||||||||||||||||||    
T  41966424 ctcttcattgtttttgaccaataaaaactgagaaaaaagaagttgtca-taaaaattgtttaaaatagttgttcaaatatcactactct 41966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47945030 - 47945070
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  47945030 ttctctctcatactcacattatcttcttattctctctcttc 47945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47950460 - 47950500
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  47950460 ttctctctcatactcacattatcttcttattctctctcttc 47950500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6822560 - 6822517
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  6822560 actttttctctcatactcacattatcttcttattctctctcttc 6822517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24380748 - 24380705
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||    
T  24380748 actttctttctcatactcacattatcttcttattctctctcttc 24380705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27866564 - 27866521
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  27866564 actttatctctcatactcacattatcttcttattctctctcttc 27866521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 41538529 - 41538564
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41538529 ttctctctcatactcacattatcttcttattctctc 41538564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41666956 - 41666999
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||    
T  41666956 actttatctctcatactcacattatcttcttattctctctcttc 41666999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45335906 - 45335949
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| || ||||||||| ||||    
T  45335906 actttctctctcatactcacattatcttcatattctctctcttc 45335949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 48639407 - 48639372
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  48639407 ttctctctcatactcacattatcttcttattctctc 48639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 1709331 - 1709365
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  1709331 ttctctctcatactcacattatcttcttattctct 1709365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Complemental strand, 6655592 - 6655562
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagaga 83  Q
    |||||||||||||||||||||||||||||||    
T  6655592 ctctccattgtttttaaccaatgaaaagaga 6655562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7295495 - 7295533
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  7295495 actttctctctcatactcacattatattcttattctctc 7295533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28081809 - 28081771
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  28081809 actttctctctcatactcacattatcttgttattctctc 28081771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29923715 - 29923753
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  29923715 actttctctctcatactcacattatcttattattctctc 29923753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36186903 - 36186865
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  36186903 actttctctctcatactcacattatattcttattctctc 36186865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36920847 - 36920885
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  36920847 actttctctctcatacttacattatcttcttattctctc 36920885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 37325794 - 37325728
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatg 119  Q
    |||||||||||||||||||||| |||||||||| |||  |  ||||||| |||| ||| ||||||||    
T  37325794 ctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatg 37325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 39415462 - 39415496
Alignment:
Q  1 actttctctctcatactcacattatcctcttattc 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  39415462 actttctctctcatactcacattatcttcttattc 39415496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41985127 - 41985089
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  41985127 actttctctctcatactcacattattctcttattttctc 41985089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 5198732 - 5198652
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatg-gttgttcaaatatcact 136  Q
    |||||||||||| ||| ||||||||||||| ||||||| || ||| || ||||| | | ||||| |||||||||||||||||    
T  5198732 tccattgtttttgaccgatgaaaagagagaaaaaagaaattatca-cataagttgtctaaaatgagttgttcaaatatcact 5198652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 23034334 - 23034297
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  23034334 tctctcatactcacattatcttcttattctctctcttc 23034297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 46022450 - 46022406
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||    
T  46022450 ctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 46022406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 7990125 - 7990161
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  7990125 tttctctcttatactcacattatactcttattctctc 7990161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8459647 - 8459679
Alignment:
Q  1 actttctctctcatactcacattatcctcttat 33  Q
    ||||||||||||||||||| |||||||||||||    
T  8459647 actttctctctcatactcatattatcctcttat 8459679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 26153691 - 26153727
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||  ||||||||||||    
T  26153691 tttctctctcatactcacattatattcttattctctc 26153727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 26153759 - 26153842
Alignment:
Q  56 tccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||| |||||| | ||||||||||||| |  ||||||||||| || ||||| | | | ||| ||||||||||||||||||||    
T  26153759 tccattgattttaaacgatgaaaagagagaaatgagaagttgtca-cataagttgtctcatatgtttgttcaaatatcactactc 26153842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 27688733 - 27688765
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  27688733 ctctccattgtttttgaccaatgaaaagagaga 27688765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 30941273 - 30941305
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||||||||||||| |||||    
T  30941273 ctctccattgtttttaaccaatgaaaaaagaga 30941305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 41030330 - 41030370
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||| |||||||||||| |||||||||||| ||||    
T  41030330 ttctctctcacactcacattatcttcttattctctctcttc 41030370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44596153 - 44596117
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  44596153 tttctctctcatactcacactatcttcttattctctc 44596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5130405 - 5130264
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||        ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5130405 acttactctctcatactcacattgtcctcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtca 5130306  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    | |||| || |||||||| |||||||||||||||||||||||    
T  5130305 caaaaaattgtatgaaatagttgttcaaatatcactactctt 5130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 13613989 - 13613849
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||  |||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  13613989 tttctcttacatactcacattatcctcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaaattgtcacc 13613890  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  13613889 aaaagttgtatgaaatgattgttcaaatatcactattcttt 13613849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12661974 - 12661835
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||        |||||||||  |||||||||||||||||||||| ||||||||||||||    
T  12661974 actttctctctcatactcacattatccttttattctctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtca 12661875  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| |||||||| |||||||||||||||| ||||    
T  12661874 ccaaaagttgtatgaaatagttgttcaaatatcaccactc 12661835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 14206433 - 14206568
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||||||||||||||||||| ||  |||||    
T  14206433 actttctctctcatactcacattatcctcttattatctctcttcatttttctctctccattgtttttaaccaatgaaaagagagagaaaaaaaactgtca 14206532  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    |||||| || ||||||||||||||||||||||||||    
T  14206533 ccaaaaattgtatgaaatggttgttcaaatatcact 14206568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10232543 - 10232682
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||        |||||||||  |||||||||||||||||||||| ||||||||||||||    
T  10232543 actttctctctcatattcacattatccttttattctctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtca 10232642  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||| |||| |||||||||||||||||||||    
T  10232643 ccaaaagttgtataaaatagttgttcaaatatcactactc 10232682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40223812 - 40223674
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||| |||||||||||| | |||||| |||||||||    
T  40223812 actttctctctcatactcacattatcctcttattctctctctttctttttctctctccattgtttttatccaatgaaaagacaaagaaaa-aagttgtca 40223714  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  40223713 ccaaaaattgtatgaaatggttgttcaaatatcactactc 40223674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16202764 - 16202903
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||| |||| ||| |||  ||||||||| ||||||||||||||    
T  16202764 actttctctctcatactcacattatcctcttattctctctcttctttattctctctccattattttcaactaatagaaagagagaaaaaagaagttgtca 16202863  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | ||||||| ||||||||| ||||||||||||||||||||    
T  16202864 ctaaaagttgtatgaaatgattgttcaaatatcactactc 16202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 31284421 - 31284287
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| |||||||| ||||||| || |||         |||||||||||||||||||||||||||||||||||||||||||||||     
T  31284421 actttctctctcatactcatattatccttttattctttctctttctttttctctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc- 31284323  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcact 136  Q
     |||||||| ||||||||||||||||||||||||||    
T  31284322 gcaaaagttgtatgaaatggttgttcaaatatcact 31284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 3634538 - 3634675
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||        |||||  |||||||||| |||||||||||||||||||| |||||||||    
T  3634538 actttctctctcatactcacattatcctcttatcctctctcttcttttttctctctctgttgtttttaatcaatgaaaagagagagaaaa-aagttgtca 3634636  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
     |||||||| |||| ||||||||||||||||||||||||    
T  3634637 tcaaaagttgtatgtaatggttgttcaaatatcactact 3634675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34381056 - 34381189
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  34381056 actttctctctcatactcacattattctcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtca 34381155  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcac 135  Q
     ||||| || ||| |||||||||||||||||||||    
T  34381156 -caaaaattatatcaaatggttgttcaaatatcac 34381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3141539 - 3141678
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgttttt-aaccaatgaaaagagagagaaaagaagttgtc 99  Q
    |||| |||| |||||||||||||||| |||||||||||| ||||        ||||| ||||||||| |||||||||||||||||| |||| ||||||||    
T  3141539 acttcctctatcatactcacattatcatcttattctctctcttcttttttctctctctattgttttttaaccaatgaaaagagagaaaaaa-aagttgtc 3141637  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | |||||||| ||||||||||||||||||||||||||||||    
T  3141638 atcaaaagttgtatgaaatggttgttcaaatatcactactc 3141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 125136 - 125273
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||| ||||||||||||| ||||||||||||| ||||        ||||| ||||||||| ||||||||||||||||| |||||||||||||     
T  125136 actttctttctaatactcacattattctcttattctctctcttcctttttttctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtc- 125234  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
     |||||||| ||| |||||||||||||||||||||||||    
T  125235 gcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6515465 - 6515326
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||| |||| ||||| |||||||||| ||||||||| || ||||        ||||| |||||||||||||||||||||||||||||||| |  ||||||    
T  6515465 acttcctctatcatattcacattatcatcttattctttctcttcctttttttctctctattgtttttaaccaatgaaaagagagagaaaaaa--ttgtca 6515368  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  6515367 ccaacagttgtatgaaatggttgttcaaatatcactactctt 6515326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 21749459 - 21749544
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| || ||| |||||||||||||||||||||||||||||    
T  21749459 cattgtttttaaccaatgaaaagagagaaaaaagaaattgtcaccaaaaattatataaaatggttgttcaaatatcactactcttt 21749544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39595316 - 39595456
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcact--tcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    |||||||||||||||||||| |||| ||||||||||||| ||  ||        ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  39595316 actttctctctcatactcacgttattctcttattctctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgt 39595415  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    || |||||||| ||| |||||||||||||||||||| |||||    
T  39595416 ca-caaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 2117615 - 2117525
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||    
T  2117615 ctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 20720036 - 20719902
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    ||||||||| ||||||||| ||||||||||||| |||         ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  20720036 tctctcatattcacattatactcttattctctctctttctttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtca-caaaa 20719938  T
Q  107 gttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||| | | |||||| |||||||||||||||||||||    
T  20719937 gttgtctcaaatggatgttcaaatatcactactctt 20719902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11306742 - 11306879
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||| |||| ||||||||||||  |||         ||||| ||||||||||||||||||||||||||| |||||||||||||     
T  11306742 actttctctctcatactcacgttatactcttattctctatctt--tatttttctctctattgtttttaaccaatgaaaagagagaaaaaagaagttgtc- 11306838  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| ||| |||| ||||||||||||||||||||||    
T  11306839 tcaaaagttgtatcaaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11768017 - 11767877
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||| ||||||||||||||||||  | |||||||||| ||||        ||||||||| |||| ||||||||||||| |||| |||||||||||| |    
T  11768017 actttccctctcatactcacattatgtttttattctctctcttcctttttctctctccatttttttaaaccaatgaaaagtgagaaaaaagaagttgt-a 11767919  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| | | ||||||||||||||||||||||||||||    
T  11767918 ccaaaagttgtctaaaatggttgttcaaatatcactactctt 11767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 24431643 - 24431507
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||        ||||||| ||| ||||||||||||||||||||| ||| |||||||||| |    
T  24431643 tttctctctcatactcatattatcctcttgttctctctcttcctttttctctctccaatgtgtttaaccaatgaaaagagagaaaaatgaagttgtca-c 24431545  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    || |||| | | ||||||||||||||||||||||||||    
T  24431544 aatagttgtctcaaatggttgttcaaatatcactactc 24431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 33243716 - 33243625
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  33243716 ctctccattgtttttaaccaatgaaaagagagaaaaaataaattgtca-caaaagttatctgaaatggttgttcaaatatcattactctttta 33243625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 4434521 - 4434656
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||  |||||||||||| ||||        ||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||    
T  4434521 tctctcatactcacattattatcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaaaagaga-aaaaaaagctgtcaccaaaa 4434619  T
Q  107 gttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||| ||||||||  |||||||||||||| | ||||||    
T  4434620 gttgtatgaaataattgttcaaatatcattcctcttt 4434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19376159 - 19376059
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  19376159 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 19376060  T
Q  101 c 101  Q
    |    
T  19376059 c 19376059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 33567214 - 33567125
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||| ||| ||||||||||||| |||||||||||||||    
T  33567214 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtca-caaaagttgtatcaaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42909763 - 42909861
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42909763 actttctttctcatactcacattatccttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtc 42909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 12718407 - 12718264
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||| |||||||||  | |||||||||| ||||        ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12718407 actttatctctcatattcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtca 12718308  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
     ||||| || |   |||||||||||||||||||||||||| ||||    
T  12718307 -caaaaattgttgaaaatggttgttcaaatatcactactcattta 12718264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 12779633 - 12779490
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12779633 actttatctctcatactcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtca 12779534  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctttta 145  Q
     ||||| || |   |||||||| ||||||||||||||||| ||||    
T  12779533 -caaaaattgttgaaaatggttattcaaatatcactactcattta 12779490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 19127172 - 19127310
Alignment:
Q  5 tctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaa 104  Q
    |||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||  |||||||||||  |||| ||||||||||||| | ||    
T  19127172 tctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcgc-aa 19127270  T
Q  105 aagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||| | | ||||||||||||||||||||||||||||||    
T  19127271 aagttgtttaaaatggttgttcaaatatcactactctttt 19127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29227750 - 29227890
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||        || ||||||||| ||| ||||| |||||||||| |||  |||||||||    
T  29227750 actttctctctcatactcacattatcctcttattccctctcttcatttttctctttccattgttattatccaataaaaagagaga-aaacaaagttgtca 29227848  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    |||||| || ||| |||| |||||| |||||||||| |||||    
T  29227849 ccaaaaattatataaaatagttgtttaaatatcactgctctt 29227890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 41460160 - 41460291
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||        ||||||||||||||||||||||||||||||||| ||| || |||||||    
T  41460160 actttatctctcatactcacattatattcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtca 41460259  T
Q  101 ccaaaagttttatgaaatggttgttcaaatat 132  Q
      |||  | |||  ||||||||||||||||||    
T  41460260 tgaaagttgttagcaaatggttgttcaaatat 41460291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 28811474 - 28811607
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||  |||||||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||| |||||| ||||||| |    
T  28811474 tttctcttacatactcacattatactcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtca-c 28811572  T
Q  103 aaaagttttatgaaatggttgttcaaatatcacta 137  Q
    ||||||| | | |||| | | ||||||||||||||    
T  28811573 aaaagttgtttcaaatagatattcaaatatcacta 28811607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 7927447 - 7927542
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    |||| |||| ||||||||||||||||||||||| | |||||||||| || |||| || ||| ||||| |||||||||||||||| |||||| ||||    
T  7927447 ctcttcattatttttaaccaatgaaaagagagaaagaagaagttgttactaaaaattgtattaaatgattgttcaaatatcactgctctttaaaaa 7927542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14323995 - 14323856
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||| ||||||||||  | ||||| |||| ||||        ||||||||||||||| |||||| ||||| |||| |||||||||||| |    
T  14323995 actttctctctcatgctcacattatatttttattttctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaaagaagttgt-a 14323897  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| | | ||| ||||||| |||||||||||||||    
T  14323896 ccaaaagttatctcaaaaggttgtttaaatatcactactct 14323856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 27392729 - 27392590
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||| | ||||||||||| ||| | ||||        ||||||||||||||| ||||||||||||||| | |||| |||||||||    
T  27392729 actttatctctcatactcatagtatcctcttatcctccctcttcatttttctctctccattgtttttgaccaatgaaaagagaaaaaaaataagttgtca 27392630  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     |||||||| | | | ||||||||||||||| |||||||||    
T  27392629 -caaaagttgtctcatatggttgttcaaataacactactct 27392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33910115 - 33910015
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  |||||||||||  |||         ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  33910115 actttctctctcatactcacattatattcttattctctatctttatttttctctctccattatttttaatcaatgaaaagagagagaaaagaagttgtca 33910016  T
Q  101 c 101  Q
    |    
T  33910015 c 33910015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 11666223 - 11666361
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| ||| | ||||||||||||||||| |||         ||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  11666223 actttctctctcataatcataatatcctcttattctctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtta 11666322  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | | |||||| |||||||| | ||||||    
T  11666323 -caaaagttatctcatatggtttttcaaataacgctactc 11666361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17063909 - 17064008
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||  | |||||||||| ||||        ||||||||||||||||||||||||||||||||||||| || |||||||    
T  17063909 actttatctctcatactcacattatatttttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagagaaatgaggttgtca 17064008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 9714161 - 9714024
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaa-gagagagaaaagaagttgtcac 101  Q
    |||||||||||||||| |||||| || ||||| |||| ||||        ||||||||||||||| ||||||||||| || ||| || ||||||||||||    
T  9714161 tttctctctcatactcgcattatacttttattatctctcttcctttttctctctccattgtttttgaccaatgaaaaagatagaaaatagaagttgtcac 9714062  T
Q  102 caaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     || |||| ||| | ||||||||||||||||||||||||    
T  9714061 -aagagttgtatcatatggttgttcaaatatcactactc 9714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40566244 - 40566104
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaa-aagaagttgtc 99  Q
    |||||| |||||||| |||||||||  |||||||||||| ||||        ||||||||||||||| ||||||||||||||||| || || |||||||     
T  40566244 actttcactctcatattcacattatattcttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaaaataaaaagttgtt 40566145  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |  ||||||| | | |||||| ||||||||||||||||||||    
T  40566144 a-aaaaagttgtctcaaatggatgttcaaatatcactactct 40566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 91259 - 91400
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||        |||| |||||||||| ||||||||||||||||| || | | |||||||    
T  91259 actttctctctcatactcacattatattcttactctctctcttcctttttctctcttcattgtttttgaccaatgaaaagagagaaaagaaaggttgtca 91358  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
      | | ||| ||| |||||||||||||||||||| | ||||||    
T  91359 -aataggttgtatcaaatggttgttcaaatatcattgctcttt 91400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 34767439 - 34767344
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||||||||||||||||| |||||||||| || ||          ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  34767439 ttctctctcatactcacattatactcttattctatctcta--tttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcac 34767344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26660438 - 26660299
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||| | ||||  |||| ||||||| |||| |    
T  26660438 actttctctctcatactcacattatatttttattctctctcttcctttttctctctccattgtttttgaccagtaaaaaatgagaaaaaagaaattgt-a 26660340  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| | | ||| | ||||| |||||||||||||||    
T  26660339 ccaaaagttatctcaaaagattgtttaaatatcactactct 26660299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26932030 - 26931891
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||| | ||||  |||| ||||||| |||| |    
T  26932030 actttctctctcatactcacattatatttttattctctctcttcctttttctctctccattgtttttgaccagtaaaaaatgagaaaaaagaaattgt-a 26931932  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| | | ||| | ||||| |||||||||||||||    
T  26931931 ccaaaagttatctcaaaagattgtttaaatatcactactct 26931891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 30574404 - 30574256
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| ||  ||||||  |||| ||||        ||||||||||||||| |||||| | |||||||| |||  |||||||||    
T  30574404 actttctctctcatactcacatgatggtcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtca 30574305  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttttaaaat 149  Q
    | |||| | | ||| ||||| ||| ||||||||| | ||||||||||||    
T  30574304 ctaaaattgtcatggaatggatgtacaaatatcattgctcttttaaaat 30574256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 39458737 - 39458823
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| ||||||||||||||| | |||| ||||||||| ||||| || ||| | ||||||||| ||||| ||||||||    
T  39458737 ctctccattgtttttgaccaatgaaaagagataaaaaaaaagttgtca-caaaaattgtataatatggttgtttaaataacactactc 39458823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39458701 - 39458739
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39458701 actttctctctcatactcacattatcctcttattctctc 39458739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 471858 - 471956
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||| ||||||||||| |||||||| ||||| |||| |||         ||||||||||||||| | ||||||||||||||| |||||||||||||    
T  471858 actttctttctcatactcatattatcctattattatctctctttctttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaagttgtc 471956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 9403643 - 9403699
Alignment:
Q  87 aaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||    
T  9403643 aaaagaagttgtcac-aaaagttgtatcaaatggttgtttaaatatcactactctttt 9403699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 14914466 - 14914554
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||||||||| |||||| | |||||| | |||  ||||||||| |||| ||| |||||||||| ||| |||||||||||||||||    
T  14914466 ctctccattgtttttgaccaataagaagagataaaaacaaagttgtcatcaaa-gttatatgaaatggatgtacaaatatcactactctt 14914554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18449305 - 18449342
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18449305 actttctctctcatactcacattatcctcttattctct 18449342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11881014 - 11880922
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag 94  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||        || |||||||||||| |||||||| |||||||| ||||||||    
T  11881014 actttctctctcatactcacattatcttcttactctctctcttcctttttctctttccattgtttttgaccaatgagaagagaga-aaaagaag 11880922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9636185 - 9636101
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  |||||  ||||| ||||        ||||||||||||||| |||||||||||||||||    
T  9636185 actttctctctcatactcacattatattcttaccctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 9636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13734387 - 13734303
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||  ||||| ||||||  |||        ||||||||||||||| |||||||||||||||||    
T  13734387 actttctctctcatactcacattatattcttactctctcttttcttttttctctctccattgtttttgaccaatgaaaagagaga 13734303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20985556 - 20985513
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  20985556 actttctctctcatactcacattatcttcttattctctctcttc 20985513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 29402278 - 29402368
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||||||||| |||| |||||| |||||| ||| |||||||||||||| || ||||| | | | ||||||||||||| ||||| ||||||||    
T  29402278 ctctccattgattttgaccaataaaaagaaagaaaaaagaagttgtca-cataagttgtctcacatggttgttcaaacatcaccactctttt 29402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 43482459 - 43482540
Alignment:
Q  53 ctctccattgtttttaaccaatgaa--aagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatc 133  Q
    |||||||||||||||||||||| ||  |||| ||| |||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  43482459 ctctccattgtttttaaccaataaaagaagaaagaaaaaagaagttgtca-caaaaattgtatcaaatagttgttcaaatatc 43482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7080574 - 7080612
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7080574 actttctctctcatactcacattatcttcttattctctc 7080612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 15531860 - 15531778
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtca-ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||||||||||||||| ||||||| ||||||   |||| || | | || || ||||||||||||||||||||    
T  15531860 attgtttttaaccaatgaaaagagagaaaaaagaaattgtcataaaaaaattgtctcaactgattgttcaaatatcactactc 15531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33567250 - 33567212
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33567250 actttctctctcatactcacattattctcttattctctc 33567212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 4835004 - 4834924
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||| ||||||| || |||||||||||||||||||||||||||| ||| ||| |||| | | |||| | |||||||||||||    
T  4835004 ctcttcattgttcttgaccaatgaaaagagagagaaaagaagttatca-caagagttgtctcaaatagatgttcaaatatca 4834924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8087843 - 8087941
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||| |||||||| ||||||||||  ||||||| |||| ||||        ||||||||||||||| |||||||||||||||||  |||||| |||||    
T  8087843 actttttctctcatgctcacattatattcttattttctctcttcctttgtctctctccattgtttttgaccaatgaaaagagagaagaaagaaattgtc 8087941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 15531986 - 15531945
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  15531986 tttctctgtcatactcacattatcctcttattctctctcttc 15531945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 3960188 - 3960063
Alignment:
Q  9 tctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagt 108  Q
    |||||||||||||||||  |||||||||||| |||         ||||||||||||||| | ||||||||||||| | ||| || |||||||  |||  |    
T  3960188 tctcatactcacattatattcttattctctctctttctttttctctctccattgtttttgatcaatgaaaagagaaaaaaatgaggttgtcatgaaagtt 3960089  T
Q  109 tttatgaaatggttgttcaaatatca 134  Q
     |||  ||||||||||||||||||||    
T  3960088 gttagcaaatggttgttcaaatatca 3960063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 14073097 - 14073133
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14073097 tttctctctcatacttacattatcctcttattctctc 14073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 36899505 - 36899465
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  36899505 ttctctctcatactcacattatcttcttattctctctcttc 36899465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3031878 - 3031958
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaaga 81  Q
    ||||||||| |||||||||||||||| |||||||||||  ||||        |||| |||||||||| |||||||||||||    
T  3031878 actttctctttcatactcacattatcttcttattctctttcttccttcttctctcttcattgtttttgaccaatgaaaaga 3031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 6865762 - 6865715
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| ||||||||||||||||| || | |||||||||    
T  6865762 ctctccattgtttttgaccaatgaaaagagagaaaataaaagttgtca 6865715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6964393 - 6964358
Alignment:
Q  1 actttctctctcatactcacattatcctcttattct 36  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6964393 actttctctctcatactcacattatactcttattct 6964358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12203191 - 12203234
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||    
T  12203191 actttctctctcatgctcacattatcttcttattctctctcttc 12203234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 12891120 - 12891040
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||| |||||||||| |||||||||||| ||||        || |||||||||||| | ||||||||||||||    
T  12891120 ttctctctcatattcacattatcttcttattctctctcttcctttttctctttccattgtttttgatcaatgaaaagagag 12891040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17574251 - 17574208
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  17574251 actttctctctcatactcacattatctttttattctctcgcttc 17574208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 18449362 - 18449397
Alignment:
Q  63 tttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||||||||| ||||||||||||    
T  18449362 tttttaaccaatgaaaagagagaaaaaagaagttgt 18449397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21023342 - 21023385
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  21023342 actttctctctcatactcacattattttcttattctctctcttc 21023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 34693240 - 34693205
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34693240 ttctctctcatactcacattatcttcttattctctc 34693205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 582892 - 582808
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaa 89  Q
    ||||||||||||||||| |||||  ||||||||||||  |||        |||||| |||||||| |||||||||||||||||||||    
T  582892 tttctctctcatactcatattatattcttattctctc--ttcctttttctctctcctttgtttttgaccaatgaaaagagagagaaa 582808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2117651 - 2117613
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  2117651 actttctctctcatactcacattatattcttattctctc 2117613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2456070 - 2456112
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcactt 43  Q
    ||||||| |||||||||||||||||  ||||||||||||||||    
T  2456070 actttctatctcatactcacattatattcttattctctcactt 2456112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 4820202 - 4820305
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||||| |||||| |||||||||||| ||||         |||| ||||||||| |||||| | |||||||| ||   ||||||||||||    
T  4820202 ttctctctcatactcatattatcttcttattctctctcttcctttttctgtctctattgttttttaccaataagaagagagaaaatgtaagttgtcacca 4820301  T
Q  104 aaag 107  Q
    ||||    
T  4820302 aaag 4820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8725449 - 8725411
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  8725449 actttctctctcatactcacattatattcttattctctc 8725411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 8959256 - 8959346
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| |||||| |||||||||| |||  | |||||| |||||  | | || || ||| ||| ||||||||||||||||||    
T  8959256 ctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatcactactcttt 8959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9940100 - 9940138
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  9940100 actttctctctcatactcacattatcttcttactctctc 9940138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 11464098 - 11464008
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||||||| |||||| |||||||||| |||  | |||||||| |||  | ||||| ||||| ||| ||||||||| | ||||||    
T  11464098 ctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctcttt 11464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22653699 - 22653737
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  22653699 actttctctctcatactcacattatcttcttattttctc 22653737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 3154618 - 3154565
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    ||||||||| |||||||| ||| |||||||||| |||  |||||||||||||||    
T  3154618 ctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaa 3154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 7077314 - 7077233
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| ||||| |||||| |||||||||| |||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  7077314 ctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 7077233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 8897539 - 8897568
Alignment:
Q  115 aaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||||||||||||||||||||||    
T  8897539 aaatggttgttcaaatatcactactctttt 8897568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 8955574 - 8955541
Alignment:
Q  112 atgaaatggttgttcaaatatcactactctttta 145  Q
    ||||||||||||||||||||||| ||||||||||    
T  8955574 atgaaatggttgttcaaatatcattactctttta 8955541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 23991328 - 23991408
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    |||| ||||||||| ||||||||||||||||| ||| || ||| |||  ||||||| |||  ||||||||||||||||||||    
T  23991328 tctcaattgtttttgaccaatgaaaagagagaaaaatgaggttctca-aaaaagttgttagcaaatggttgttcaaatatca 23991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 27340915 - 27340956
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  27340915 tttctctctcatactcacattatattcttattctctctcttc 27340956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31025032 - 31024995
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||  |||||||||||    
T  31025032 actttctctctcatactcacattatattcttattctct 31024995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 5996761 - 5996809
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaa-gaagttgtca 100  Q
    ||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  5996761 ctctccattgttttttatcaatgagaagagagagaaaaggaagttgtca 5996809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18729313 - 18729273
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||| |||||||||||||||| |||||||||||| ||||    
T  18729313 ttctctttcatactcacattatcttcttattctctctcttc 18729273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39032628 - 39032588
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  39032628 ttctctctcatactcatattatcttcttattctctctcttc 39032588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27383 - 27525
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        ||||||||| |||| |||||||  ||||||||| ||||||| ||||||    
T  27383 actttctctctcatactcacattatcctcttattctctctcttcctttttctctctccattattttcaaccaatagaaagagagaaaaaagaaattgtca 27482  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | |||| || |||||||||||||||||||||||||||||||||    
T  27483 ctaaaaattgtatgaaatggttgttcaaatatcactactcttt 27525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 105)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13711105 - 13711246
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||||| || ||||        ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13711105 actttctctctcatactcacattatactcttattctttctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtca 13711204  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| ||  |||| ||||||||||||||||||||||||    
T  13711205 -caaaagttgtacaaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 36133018 - 36133159
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||        || ||||||||| |||||||||||||||||||| ||||||||||||||    
T  36133018 actttatctctcatactcacattatactcttattctctctcttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtca 36133117  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     |||||||| |||||||| ||||||||||||||||||||||||    
T  36133118 -caaaagttgtatgaaatagttgttcaaatatcactactcttt 36133159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 7428475 - 7428606
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||||||||||||| || ||||        ||||||||||||||||| ||||||||||||||| ||||  ||||||||||    
T  7428475 tttctctctcatactcacattatcctcttattctgtctcttcttttttctctctccattgtttttaatcaatgaaaagagagaaaaaa--agttgtcacc 7428572  T
Q  103 aaaagttttatgaaatggttgttcaaatatcact 136  Q
    |||| || ||||||||||||||||||||||||||    
T  7428573 aaaaattgtatgaaatggttgttcaaatatcact 7428606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 26321719 - 26321578
Alignment:
Q  6 ctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||| |||||||||||||||| |||||||||||| ||||        ||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  26321719 ctctatcatactcacattatcatcttattctctctcttcctttttctctctcaattgtttttaaccaatgaaaagagagaaaaaa-aagttatcaccaaa 26321621  T
Q  106 agttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    |||| ||||||||| |||||||||||||||||||||| |||||    
T  26321620 agttgtatgaaatgattgttcaaatatcactactcttataaaa 26321578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 34139059 - 34138925
Alignment:
Q  7 tctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgttttt-aaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||||||||||||||||||||||||||||||||| |||        ||||||||||||||| |||||||||||| ||||  |||| |||||||| |||||    
T  34139059 tctctcatactcacattatcctcttattctctcaattcctttttctctctccattgttttttaaccaatgaaaatagaggaaaaaaaagttgtcgccaaa 34138960  T
Q  106 agttttatgaaatggttgttcaaatatcactactc 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  34138959 agttgtatgaaatggttgttcaaatatcactactc 34138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 19913880 - 19913968
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  19913880 ctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatcactactct 19913968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12600092 - 12600227
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| || |||||||||| ||||        || ||||||||| |||||||||||||||||||| ||||||||||||||    
T  12600092 actttctctctcatactcacattatactattattctctctcttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtca 12600191  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcacta 137  Q
     |||||||| |||||||| ||||||||||||||||||    
T  12600192 -caaaagttgtatgaaatagttgttcaaatatcacta 12600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 45515574 - 45515494
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45515574 ctctccattgtttttaaccaatgaaaagagaga-aaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatca 45515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 3091787 - 3091926
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||||||||| || ||||| |||| ||||        ||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  3091787 tttctctctcatactcacattattcttttattatctctcttcctttttttctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca-c 3091885  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||| ||| ||||  |||||||||||||||||||||||    
T  3091886 aaaagttgtatcaaataattgttcaaatatcactactcttt 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 22390199 - 22390337
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||||| ||||||| ||||||||||||| ||||        ||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22390199 ttctctctcatacttacattatactcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtca-ca 22390297  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    | |||| | | |||||| |||||||||||| |||||||||    
T  22390298 agagttgtctcaaatggatgttcaaatatctctactcttt 22390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 7086151 - 7086012
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||        ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  7086151 actttctctctcatactcacattatcctcttattctccctcttcctttttctctctctattgtttttgaccaatgaaaagagagagaaaataagttgtca 7086052  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     ||||| || | | | ||||||||||||||| |||||||||    
T  7086051 -caaaaattgtctcatatggttgttcaaataacactactct 7086012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5455480 - 5455342
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||         |||||||||||||||||||||||||||||||| ||||||| ||  |     
T  5455480 actttctctcttatactcacattatcttcttattctctctcttcctttttctttctccattgtttttaaccaatgaaaagagagaaaaaagaaatt-acc 5455382  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| ||| |||||||||||||||||| |||||||    
T  5455381 ccaaaagttgtataaaatggttgttcaaatattactactc 5455342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11229348 - 11229210
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||| ||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  11229348 actttctctctcatactcacattatgtttttattccctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-a 11229250  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | | ||||||||||||||||||||||||||    
T  11229249 ccaaaagttgtctaaaatggttgttcaaatatcactactc 11229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43725249 - 43725382
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  43725249 actttctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt-a 43725347  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcac 135  Q
    ||||||||| | | |||||||||||||||||||||    
T  43725348 ccaaaagttgtctaaaatggttgttcaaatatcac 43725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 11164351 - 11164264
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||| |||||||||||||||| |||||    
T  11164351 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcaccactct 11164264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13104523 - 13104663
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||        ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  13104523 actttctctctcatacttacattatcctcttattctcactcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtca 13104622  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     ||||| || | | | ||||||||||||||| ||||||||||    
T  13104623 -caaaaattgtctcatatggttgttcaaataacactactctt 13104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6639499 - 6639399
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||        ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6639499 actttctctctcatactcacattatactcttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagagagaaaagaagttgtca 6639400  T
Q  101 c 101  Q
    |    
T  6639399 c 6639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 14714033 - 14714168
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    ||||||||||||||||||||||  |||||||||||| ||||        ||||| ||||||||| | |||||||||||||||||||||||||||||| ||    
T  14714033 ttctctctcatactcacattataatcttattctctctcttcatttttctctctcaattgtttttgatcaatgaaaagagagagaaaagaagttgtca-ca 14714131  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||| || | | |||||| |||||||||||||||||||    
T  14714132 aaaattgtctcaaatggatgttcaaatatcactactc 14714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 32750042 - 32750183
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||        ||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  32750042 actttccctctgatactcacattatcctcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtca 32750141  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
     ||||| || | | | ||||||||||||||| |||||||||||    
T  32750142 -caaaaattgtctcatatggttgttcaaataacactactcttt 32750183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 12066005 - 12066095
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt---ttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    ||| || |||||||||||||||||||||||    
T  12066005 ctctccattgattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtggtatcaattggttgttcaaatatcactactc 12066095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 33296062 - 33295975
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||| ||| ||||||||||||||||||    
T  33296062 ctctcaattgtttttaaccaatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtacgaaatagttcttcaaatatcactactct 33295975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1889191 - 1889291
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  1889191 actttctctctcatactcacattatactcttattctctctcttcctttttctctcaccattgtttttgaccaatgaaaagagagaaaaaagaagttgtca 1889290  T
Q  101 c 101  Q
    |    
T  1889291 c 1889291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29795480 - 29795618
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| |||||||||| || ||||        ||||||||||||||| ||||||||||||||||| |||||  |||||||    
T  29795480 actttctctcacatactcacattatactcttattctttctcttcctttttatctctccattgtttttgaccaatgaaaagagagaaaaaagtggttgtca 29795579  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
     |||||||| | | |||| | |||||||||||||||||||    
T  29795580 -caaaagttgtttcaaattgatgttcaaatatcactactc 29795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15141506 - 15141604
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||         |||||||||||||| || ||||||||||||||||||||||||||||    
T  15141506 actttctctctcatactcacattatactcttattctctctcttcctttttctttctccattgtttttgactaatgaaaagagagagaaaagaagttgtc 15141604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 12962482 - 12962569
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| | ||||| || ||| |||| ||||||||||||||||||||||    
T  12962482 ctctccattgtttttaaccaattaaaagagagagaaaagaaattgtta-caaaatttatatcaaatagttgttcaaatatcactactct 12962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 14140314 - 14140228
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||| | | ||||| ||||||||||||||||||||    
T  14140314 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtca-caaaagttattttaaatgattgttcaaatatcactactc 14140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 23345013 - 23344878
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||| ||||||||| || |||||||||| ||||        ||||| ||||||||| ||||||||||||||||||||||||||||||||  |    
T  23345013 ttctctctcatattcacattatacttttattctctctcttcctttttctctctctattgtttttgaccaatgaaaagagagagaaaagaagttgtca-ga 23344915  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | |||| | | |||||  |||||||||||||||||||    
T  23344914 agagttgtctcaaatgaatgttcaaatatcactactc 23344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23880139 - 23880277
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||| ||||| ||||||||||||||||| |||| || ||||||    
T  23880139 actttctctctcatactcacattattctcttattctctctcttcctttttctctctccatttttttttaccaatgaaaagagagaaaaaataaattgtca 23880238  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
      ||||||| | | | ||||||||||||||| || |||||    
T  23880239 -taaaagttgtctcatatggttgttcaaataacattactc 23880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 25801840 - 25801704
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcact--tcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||  ||        ||||||||||||||| ||||||||||||||||| |||||||||  |    
T  25801840 actttatctctcatactcacattatactcttattctctctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagtgat 25801741  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    || |||||||| | | |||| |||||||||||||||||    
T  25801740 ca-caaaagttgtctcaaattgttgttcaaatatcact 25801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28014000 - 28014098
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||        ||||||| | |||||||||||||||||||||||||||| ||||||||    
T  28014000 actttctctctcatactcacgttatcctcttattttctctcttcttttttctctctccaatatttttaaccaatgaaaagagagagaaaataagttgtc 28014098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 30996809 - 30996873
Alignment:
Q  54 tctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaat 118  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  30996809 tctccattatttttaaccaataaaaagagagagaaaagaagttgtcaccaaaaattgtatgaaat 30996873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 5067660 - 5067531
Alignment:
Q  9 tctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagt 108  Q
    |||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||| |||||||||||  | |||||||    
T  5067660 tctcatactcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttg--atcaaaagt 5067563  T
Q  109 tttatgaaatggttgttcaaatatcactactc 140  Q
    | | | ||||| ||||||||||||||||||||    
T  5067562 tgtctaaaatgattgttcaaatatcactactc 5067531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 9202543 - 9202406
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| ||||| |||||||||||||||||| | || ||||        |||| ||| |||||||| ||||| ||||||||| |||| || ||||||    
T  9202543 actttctctttcatattcacattatcctcttattttatctcttcttttttctctcttcatagtttttaatcaatggaaagagagaaaaaaaaa-ttgtca 9202445  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactact 139  Q
      |||| || |||||||||||||||||||||||||||||    
T  9202444 taaaaaattgtatgaaatggttgttcaaatatcactact 9202406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34249624 - 34249765
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag-agaaaagaagttgtc 99  Q
    ||||||||||| |||||||| |||| |||||||||| || ||||        ||||||||||||||| |||||||||||||||| | |||| ||||||||    
T  34249624 actttctctcttatactcacgttattctcttattctttctcttcctttttccctctccattgtttttgaccaatgaaaagagagaaaaaaataagttgtc 34249723  T
Q  100 accaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    | ||||| || | | | ||||||||||||||| ||||||||||    
T  34249724 a-caaaaattgtctcatatggttgttcaaataacactactctt 34249765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 39285907 - 39286020
Alignment:
Q  11 tcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttt 110  Q
    ||||| ||||||||| ||||||||||||| ||||        |||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||     
T  39285907 tcatattcacattatactcttattctctctcttctttattctctctccattgtttttaaccaataaaaaaagagaaaaaagaagttgtca-caaaagttg 39286005  T
Q  111 tatgaaatggttgtt 125  Q
    ||| |||| ||||||    
T  39286006 tatcaaatagttgtt 39286020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 45693443 - 45693350
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttttaa 146  Q
    ||||| |||||||||||| ||| ||||||||||||||| ||| |||||  ||||||| | | ||||||||||| |||||||||||||| |||||    
T  45693443 ctctctattgtttttaactaataaaaagagagagaaaaaaagctgtcattaaaagttgtctcaaatggttgtttaaatatcactactcatttaa 45693350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36435725 - 36435857
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| |||||||||||||  |||        |||| |||||||||| | |||||||||||||||||||||| |||||||    
T  36435725 actttctctcacatactcacattatactcttattctctcttttcctttttttctcttcattgttttttatcaatgaaaagagagagaaaagaggttgtca 36435824  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
     |||||||| | | ||||   |||||||||||||    
T  36435825 -caaaagttgtttcaaataaatgttcaaatatca 36435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 42251947 - 42251807
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||| |||||||||  | |||||||||| ||||        || ||||||| |||| ||||||||||||||||| ||||||||||||||    
T  42251947 actttctctctcatattcacattatatttttattctctctcttcctttttctctttccattgattttgaccaatgaaaagagagaaaaaagaagttgtca 42251848  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     || ||||| |   ||||| ||||| ||||||||||||||||    
T  42251847 -cataagttgttccaaatgattgtttaaatatcactactctt 42251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19523428 - 19523344
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||||| |||||||||||| ||||        ||||||||||||||| |||||| ||||||||||    
T  19523428 actttctctctcatactcacattatcttcttattctctctcttcctttttctctctccattgtttttgaccaataaaaagagaga 19523344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 2013254 - 2013173
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||| |||| | | |||||| |||| |||||||||||||||    
T  2013254 attgtttttgaccaatgaaaagagagagaaaataagttgtca-caagagttgtctcaaatggatgttaaaatatcactactct 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 19695718 - 19695581
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| ||| ||||||||| || |||||||||| ||||        ||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  19695718 actttctctcttatattcacattatacttttattctctctcttcttttttttctctccattgtttttgaccaatgaaaagagag-gaaaaaaagttgtca 19695620  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    | | ||||| | | |  |||||||||||||| ||||||||    
T  19695619 c-ataagttgtctcatttggttgttcaaataacactactc 19695581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 16577568 - 16577652
Alignment:
Q  58 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactcttt 143  Q
    ||||||||||| |||||||||||||||| || | || ||||||| |||| || |||||||||||| ||||||||||| ||||||||    
T  16577568 cattgtttttatccaatgaaaagagagataagaaaa-ttgtcacaaaaaattgtatgaaatggttattcaaatatcattactcttt 16577652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 37631394 - 37631261
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||| |||||||||||||  ||||| |||||| |||         ||||||||||||||| |||||||| |||||||| |||||| |||||||    
T  37631394 actttctctcttatactcacattatattcttactctctctctttctttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtca 37631295  T
Q  101 ccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
      ||||||| |||  ||||||||||||||||||||    
T  37631294 -taaaagttgttagcaaatggttgttcaaatatca 37631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 28165175 - 28165304
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||  ||||| |||||| ||||        ||||||||| ||||| |||||| ||||||||||||||| | |||||||      
T  28165175 tttctctctcatactcacattatattcttaatctctctcttcctttttctctctccattatttttgaccaataaaaagagagagaaaaaaggttgtcatg 28165274  T
Q  103 aaaagttttatgaaatggttgttcaaatat 132  Q
    |||  | |||  ||||||||||||||||||    
T  28165275 aaagttgttagcaaatggttgttcaaatat 28165304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 15019111 - 15019036
Alignment:
Q  61 tgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcact 136  Q
    |||||||||||||| |||| ||||| |||| ||||||||| ||||||||   | ||||||||||||||||||||||    
T  15019111 tgtttttaaccaataaaaaaagagaaaaaaaaagttgtcatcaaaagttgcctcaaatggttgttcaaatatcact 15019036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 31296818 - 31296728
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||| || ||||| |   | |||||| |||||||||||||||||||||    
T  31296818 ctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtca-cataagttgtcccatatggttattcaaatatcactactctttt 31296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 34442209 - 34442295
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||  |||| || | | |||| | |||||||||||||||||||    
T  34442209 ctctccattgtttttgaccaataaaaagagagagaaaagaggttgtca-gaaaaattgtttcaaatagatgttcaaatatcactactc 34442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 36909818 - 36909732
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||||||||| |||||| | |||||||| |||  ||||||||| |||| ||| |||||||||| ||| |||||||||||||||    
T  36909818 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaa-gttgtatgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 38689005 - 38689092
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||| |||||||||||||||| ||||||||||||||  | |||||| | |||| ||| |  |||||||||||||||||||| |||||    
T  38689005 ctctctattgtttttaaccaataaaaagagagagaaagaaggttgtcccaaaaattttcactaaatggttgttcaaatatcattactc 38689092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 43205140 - 43205220
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||||||||||||||||| |||||||||||| ||||        |||| |||||||||| ||||||||||||||||    
T  43205140 ttctctctcatactcacattatcttcttattctctctcttcctttttctctcttcattgtttttgaccaatgaaaagagag 43205220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4263891 - 4263760
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||| |||||||||||||||  ||||| | |||| ||||        ||||||||||||||| |||||||| || ||||| ||||||||||||||    
T  4263891 actttctctttcatactcacattatattcttactttctctcttcctttttctctctccattgtttttgaccaatgagaaaagagaaaaaagaagttgtca 4263792  T
Q  101 ccaaaagttttatgaaatggttgttcaaatat 132  Q
      |||| | |||  || |||||||||||||||    
T  4263791 taaaaattgttagcaattggttgttcaaatat 4263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45202159 - 45202076
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||        ||||||||||||||| | ||||||||||||||    
T  45202159 actttctctctcatattcacattatcttcttattctctctcttcctttttctctctccattgtttttgatcaatgaaaagagag 45202076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32688571 - 32688489
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagaga 83  Q
    ||||||||||||||||||||||||| |||||||| | || ||||        ||||||||||||||| |||||||||||||||    
T  32688571 actttctctctcatactcacattatactcttattatgtctcttcctttttctctctccattgtttttgaccaatgaaaagaga 32688489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 36376826 - 36376781
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  36376826 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgt 36376781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 6885505 - 6885424
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    |||||||||||||||||||||||| |||||||||||| |||         ||||||||||||||| | ||||||||||||||    
T  6885505 tttctctctcatactcacattatcttcttattctctctctttctttttttctctccattgtttttgatcaatgaaaagagag 6885424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 29871330 - 29871278
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    |||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  29871330 ctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaa 29871278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 39454222 - 39454135
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
    ||||||||||||||| ||||||||||||||||| ||||||  |||||  ||||| || | | |||| | ||||||||||||||||||||    
T  39454222 ctctccattgtttttgaccaatgaaaagagagaaaaaagagattgtc-tcaaaacttgtttcaaatagatgttcaaatatcactactct 39454135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41353524 - 41353419
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| |||||||  | || |||         ||||||||| |||||||||||| |||| ||||| ||||||||||||||    
T  41353524 actttctctctcatactcacattatactcttatcatttctctttctttttctctctccattatttttaaccaataaaaaaagagaaaaaagaagttgtca 41353425  T
Q  101 ccaaaa 106  Q
    | ||||    
T  41353424 caaaaa 41353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42081081 - 42081178
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||||||||||  |  |||||||||| ||||        ||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  42081081 actttctctctcatactcacattacacctttattctctctcttcctttttctctctctattgtttttgaccaatgaaaatagagaaaaaagaagttgt 42081178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 44189878 - 44190011
Alignment:
Q  8 ctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaag 107  Q
    ||||||||||||||||||  |||||||||||| |||         ||||| |||||| || |||||||||||||||||  ||||| |||||||| || ||    
T  44189878 ctctcatactcacattataatcttattctctctctttctttttcgctctctattgttcttgaccaatgaaaagagaga--aaagatgttgtcac-aagag 44189974  T
Q  108 ttttatgaaatggttgttcaaatatcactactctttt 144  Q
    || | |  ||||| |||||||||||||||||||||||    
T  44189975 ttgtctcgaatggatgttcaaatatcactactctttt 44190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4723610 - 4723653
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  4723610 actttctctctcatactcacattatcttcttattctctctcttc 4723653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10550486 - 10550346
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||| || || ||||||| ||||| ||||        ||||||||||||||| |||||| |||| ||||| |||  |||||||||    
T  10550486 actttctctctcatactcatatgatgctcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtca 10550387  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     ||||  | | || |||||| ||| ||||||||| ||||||    
T  10550386 acaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11126508 - 11126551
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  11126508 actttctctctcatactcacattatcttcttattctctctcttc 11126551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41868396 - 41868353
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  41868396 actttctctctcatactcacattatcttcttattctctctcttc 41868353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 36763495 - 36763414
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||| |||||||| ||||||||||||||||| |||||||| ||||||  |||| | |||  ||||||||||||||||||||    
T  36763495 ctctccgttgtttttgaccaatgaaaagagaga-aaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatca 36763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 13333405 - 13333312
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||||||||||| |||| ||||||||||| | |||         ||||||||| |||||| | |||||||||||||||||||||||||||    
T  13333405 ttctctctcatactcacgttatactcttattctcactctttctttttctctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 13333312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 30413707 - 30413626
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||| ||   ||||||||||||||| | | || |||||| ||| |||||||||    
T  30413707 ctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 30413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 34372893 - 34372934
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  34372893 tttctctctcatactcacattatcatcttattctctctcttc 34372934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 8757588 - 8757728
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||| |||||||||||||||||||| |||||||||||| |||         ||||||||||||||| |||||| | ||||||||  ||  | ||||| |    
T  8757588 actttatctctcatactcacattatcttcttattctctctctttctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt-a 8757686  T
Q  101 ccaaaagtttta-tgaaatggttgttcaaatatcactactct 141  Q
    ||||||||| ||   |||| ||||||||||||||| ||||||    
T  8757687 ccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12256948 - 12256988
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  12256948 ttctctctcatactcacattatcttcttattctctctcttc 12256988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16051412 - 16051372
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  16051412 ttctctctcatactcacattatcttcttattctctctcttc 16051372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16051442 - 16051406
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16051442 tttctctctcatactcacattatcttcttattctctc 16051406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 18508125 - 18508165
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  18508125 ttctctctcatactcacattatcttcttattctctctcttc 18508165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30340037 - 30340177
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattg-tttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    |||||||||||||||||||||||||| || ||||||||| ||||        ||||| |||| ||||| |||||||| ||||||||  ||  | ||||||    
T  30340037 actttctctctcatactcacattatcttcatattctctctcttcctttttctctctctattgttttttgaccaatgagaagagagaacaacaaggttgtc 30340136  T
Q  100 accaaaagttttatgaaatg-gttgttcaaatatcactactc 140  Q
     ||||||||| ||  ||| | |||||||||||||||||||||    
T  30340137 -ccaaaagttgtaccaaaagagttgttcaaatatcactactc 30340177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 38021452 - 38021504
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaa 105  Q
    ||||||||||||||| |||||| ||||||||||||||  || |||||||||||    
T  38021452 ctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaa 38021504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38598373 - 38598333
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  38598373 ttctctctcatactcacattatcttcttattctctctcttc 38598333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 40115561 - 40115642
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagag 84  Q
    ||||||||||||||| |||||||| |||||||||||| ||||        ||||||||||||||| |  |||||||||||||    
T  40115561 tttctctctcatactaacattatcttcttattctctctcttcctttttcgctctccattgtttttgatgaatgaaaagagag 40115642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 7121458 - 7121548
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||| ||| ||||| | ||||||||||  ||| |||||||||||||| |||||||| | | |||||||| || ||||||||| ||||||||    
T  7121458 ctctctattatttttgatcaatgaaaagtaagaaaaaagaagttgtca-caaaagttatttaaaatggttatttaaatatcaccactctttt 7121548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9384419 - 9384565
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtc 99  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||        |||||||||||| || |||||||  |||| ||| | || ||| |||||    
T  9384419 actttctctctcatactcatattatcttcttattctctcttttcatttttctctctccattgttattgaccaatgcgaagaaaga-ataacaagattgtc 9384517  T
Q  100 accaaaagttttatgaaatg-gttgttcaaatatcactactcttttaaa 147  Q
    | |||||||| ||| ||| | |||||||||||| |||||||||||||||    
T  9384518 a-caaaagttgtattaaaagagttgttcaaataacactactcttttaaa 9384565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19637273 - 19637316
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||    
T  19637273 actttctctttcatactcacattatcatcttattctctctcttc 19637316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19835866 - 19835909
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||    
T  19835866 actttctctttcatactcacattatcatcttattctctctcttc 19835909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 23045273 - 23045347
Alignment:
Q  69 accaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||||| ||||| ||||||||||||||| | ||||| | | |  |||||||||||||| ||||||||||||    
T  23045273 accaatgaaaatagagaaaaaagaagttgtcac-ataagttgtctcatttggttgttcaaataacactactctttt 23045347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 30974014 - 30973874
Alignment:
Q  5 tctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaa 104  Q
    |||||||||||||||||||||| |||| |  |||| ||||        ||||||||||||||| |||||| ||||| |||| |||  ||||| ||| |||    
T  30974014 tctctctcatactcacattatcttcttttcatctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaa 30973915  T
Q  105 aagttttatgaaatggttgttcaaatatcactactctttta 145  Q
    || | |  | |||||| |||||| |||||||||||| ||||    
T  30973914 aattgtcttcaaatggatgttcatatatcactactcattta 30973874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31635837 - 31635794
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||    
T  31635837 actttctctctcatactcacattatcttcttattatctctcttc 31635794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 694365 - 694446
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| ||||||||||| ||||| ||| || |||||||  ||||||| |||  ||||| ||||||||||||||    
T  694365 ctctccattgtttttgaccaatgaaaaaagagataaatgaggttgtca-taaaagttattagcaaatgattgttcaaatatca 694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 5167765 - 5167685
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||||  ||||| ||||||  |||        ||||||||||||||| |||||||||||||||||    
T  5167765 tttctctctcatactcacattatattcttactctctc--ttcctttttctctctccattgtttttgaccaatgaaaagagaga 5167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17999790 - 17999828
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  17999790 actttctctctcatactcacattatctttttattctctc 17999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 18949108 - 18949180
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtt-ttatgaaatggttgttcaaatat 132  Q
    ||||||||| |||||| |||||| ||| |||||||||||||| |||||||| ||||||||| ||||| |||||||    
T  18949108 attgtttttgaccaataaaaagaaaga-aaaagaagttgtca-caaaagttgttatgaaatagttgtacaaatat 18949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42554820 - 42554858
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  42554820 actttctctctcatactcacattatattcttattctctc 42554858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 1574549 - 1574630
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||| ||||| ||||||||||||||||  ||| || |||||||  |||  | |||  ||||||||||||||||||||    
T  1574549 ctctccattttttttgaccaatgaaaagagagtaaaatgaggttgtcattaaagttgttagcaaatggttgttcaaatatca 1574630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 3299080 - 3299027
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 106  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||||||||    
T  3299080 ctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaa 3299027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 22296154 - 22296113
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||| |||||||||||||| |||||||||||| ||||    
T  22296154 tttctctctgatactcacattatcttcttattctctctcttc 22296113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 25270765 - 25270721
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgt 98  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||    
T  25270765 ctctccattattttta-ctaatgaaaagagagagaaaagaagttgt 25270721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28264572 - 28264609
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  28264572 actttctatctcatactcacattatcttcttattctct 28264609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40210094 - 40210057
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    ||||||||||||||||||||||||| || |||||||||    
T  40210094 actttctctctcatactcacattatacttttattctct 40210057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 42283219 - 42283139
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||||| | ||||||||||||| | || |  |||| |||| |||| ||  |||||||||||||||||||||||||||||    
T  42283219 attgtttttgatcaatgaaaagagaaaaaataatagttatcacaaaaa-ttgaatgaaatggttgttcaaatatcactactc 42283139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42665839 - 42665802
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctct 38  Q
    |||||||||||||||||||||||||  |||||||||||    
T  42665839 actttctctctcatactcacattatattcttattctct 42665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 15019145 - 15019113
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    |||||||||||||||||||||| ||||||||||    
T  15019145 ctctccattgtttttaaccaataaaaagagaga 15019113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23045134 - 23045166
Alignment:
Q  1 actttctctctcatactcacattatcctcttat 33  Q
    ||||||||||||||||||||||||| |||||||    
T  23045134 actttctctctcatactcacattatactcttat 23045166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 24491702 - 24491666
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  24491702 tttctctctcgtactcacattatcttcttattctctc 24491666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26387883 - 26387843
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  26387883 ttctctctcatactcacattattttcttattctctctcttc 26387843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 28679175 - 28679215
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  28679175 ttctctctcatactcatattatcttcttattctctctcttc 28679215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38027639 - 38027599
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttc 44  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  38027639 ttctctctcatattcacattatcttcttattctctctcttc 38027599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 40951286 - 40951318
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||| |||||||||||||||||    
T  40951286 ctctccattgttttttaccaatgaaaagagaga 40951318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 44059692 - 44059609
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagtttt-atgaaatggttgttcaaatatcactactctt 142  Q
    ||||||||| |||||| |||||||||| |||  | |||||||| ||||||| | || |||||||||||||||||| | |||||||    
T  44059692 attgtttttgaccaattaaaagagagaaaaagtaggttgtcac-aaaagttatcatcaaatggttgttcaaatataattactctt 44059609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 18050 - 18187
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||| |||||||||      
T  18050 tttctctctcatacttacattatactcttattctctctcttcatttttatctctccattgtttttaaccaatgaaaagagaga-aaaaaaagttgtca-t 18147  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||||| ||| |||| |||||||||||||||||||||||    
T  18148 aaaagttgtatcaaatagttgttcaaatatcactactctt 18187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15215 - 15076
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||||||||||||||||| |||||||||| || ||||        ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15215 actttctttctcatactcacattatactcttattctttctcttcctttttctctctccattgtttttaaccaatgaaaaaagaga-aaaagaagttgtca 15117  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
     |||||||| ||  |||| |||||||||||||||||||||||    
T  15116 -caaaagttgtaccaaatagttgttcaaatatcactactctt 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31627 - 31522
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||        ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  31627 actttctctctcatactcacattatactcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 31528  T
Q  101 ccaaaa 106  Q
    | ||||    
T  31527 caaaaa 31522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 10540 - 10397
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacca 103  Q
    |||||||||||| ||||||||| ||||||||||| | ||||        ||||||||||||||| |||||||||||||||||||||| ||||||||| ||    
T  10540 ttctctctcatattcacattattctcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaataagttgtca-ca 10442  T
Q  104 aaagttttatgaaatggttgttcaaatatcactactcttttaaaa 148  Q
    |||||| | | | ||||||||||||||| |||| ||| |||||||    
T  10441 aaagttgtctcatatggttgttcaaataacactgctcatttaaaa 10397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 36046 - 36186
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaaga--agttgt 98  Q
    ||||||||||| ||||||||||||| |||||||||||||  |||        ||||||||| ||||| ||||||||||||||||| |||| |  ||||||    
T  36046 actttctctcttatactcacattattctcttattctctc--ttc-tttttctctctccattatttttgaccaatgaaaagagagaaaaaaaacaagttgt 36142  T
Q  99 caccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||| ||||||| ||| ||||||||||||||||||||||||||||    
T  36143 cacaaaaagttgtatcaaatggttgttcaaatatcactactctt 36186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 395957 - 396046
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctt 142  Q
    ||||| ||||||||||||||||||||| ||  |||||| || ||||||| |||| || ||||||||||||||||||||||||||||||||    
T  395957 ctctctattgtttttaaccaatgaaaaaaggaagaaaaaaaattgtcacaaaaaattgtatgaaatggttgttcaaatatcactactctt 396046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 11561 - 11421
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||||||||||||||  | |||||||||| ||||        ||||||||||||||| |||||||||||| |||| |||| || |||| | |    
T  11561 tttctctctcatactcacattatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaataaattgt-atc 11463  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||| | | |||| |||||||||||||||||||||||||    
T  11462 aaaagttgtctaaaatagttgttcaaatatcactactctttt 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 219691 - 219591
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    ||||||| ||| ||| ||||||||| ||||||||||||| ||||        ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  219691 actttctttcttatattcacattatactcttattctctctcttcctttatctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtca 219592  T
Q  101 c 101  Q
    |    
T  219591 c 219591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 18672 - 18576
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtc 99  Q
    ||||||||||||||| |||||||||| |||||||||| ||||        ||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  18672 tttctctctcatacttacattatccttttattctctctcttcctttttctctctccaatgtttttaaccaatgaaaagagaaagaaaataagttgtc 18576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 113669 - 113808
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||        |||||| |||||||| ||||||||||||||||| || ||| |||||||    
T  113669 actttctctcacatactcacattatactcttattctctctcttccttttactctctccgttgtttttgaccaatgaaaagagagaaaagagaggttgtca 113768  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatcactactct 141  Q
     ||||| || | | |||| | |||| |||||||||||||||    
T  113769 -caaaaattgtttcaaatagatgtttaaatatcactactct 113808  T

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Target: scaffold0002 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 6474 - 6571
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    |||||||||||||||||||||| ||||||||||||| ||||        ||||| ||||||||| | ||||||||||||||| |||||||||| ||||    
T  6474 ttctctctcatactcacattatactcttattctctctcttcatttttctctctcaattgtttttgatcaatgaaaagagagaaaaaagaagttatcac 6571  T

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Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 440762 - 440846
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagaga 85  Q
    ||||||||||||||||||||||| |  ||||| |||||| ||||        ||||||||||||||| |||||||||||||||||    
T  440762 actttctctctcatactcacattctattcttactctctctcttcttttttctctctccattgttttttaccaatgaaaagagaga 440846  T

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Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34452 - 34540
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaag 91  Q
    ||||||||||||||||||||||||| |||||||| ||||  |||        ||||||||||||||||||||||||||||||||| |||||    
T  34452 actttctctctcatactcacattatactcttattttctc--ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaag 34540  T

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Target: scaffold0172 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17019 - 17152
Alignment:
Q  1 actttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtca 100  Q
    |||||||||||||||||||||| ||  | |||||||||| ||||        ||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  17019 actttctctctcatactcacatgatgttattattctctctcttcttttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtca 17118  T
Q  101 ccaaaagttttatgaaatggttgttcaaatatca 134  Q
    |||||  | | || |||||| ||| |||||||||    
T  17119 ccaaagttgtcattaaatggatgtacaaatatca 17152  T

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Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 38925 - 39061
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||  ||||||||||||| |||||||||||||  |||         |||||||| ||||| ||||||||||||||||| ||||||  |||||| |    
T  38925 tttctctcatatactcacattatactcttattctctcttttcttttttctatctccattattttttaccaatgaaaagagagaaaaaagagattgtca-c 39023  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    ||||||| | | |||| | |||||||||||||||||||    
T  39024 aaaagttgtttcaaatagatgttcaaatatcactactc 39061  T

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Target: scaffold0184 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 16619 - 16489
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcac 101  Q
    |||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||| |||||| |||||||| ||||||     
T  16619 tttctctctcatactcacattatattcttactctctctcttcctatttctctctccattgtttttgaccaatgaaacgagaga-aaaagaagattgtca- 16522  T
Q  102 caaaagttttatgaaatggttgttcaaatatca 134  Q
     ||||||| ||  ||||||||||| ||||||||    
T  16521 aaaaagttgtaccaaatggttgttgaaatatca 16489  T

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Target: scaffold0078 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 56225 - 56355
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaag-ttgtcac 101  Q
    |||||||||||||||||||||||  ||||| |||||| ||||        ||||||||||||||| |||||||||| |||||| |||||||| ||||||     
T  56225 tttctctctcatactcacattatattcttactctctctcttcctatttctctctccattgtttttgaccaatgaaacgagaga-aaaagaagattgtca- 56322  T
Q  102 caaaagttttatgaaatggttgttcaaatatca 134  Q
     ||||||| ||  ||||||||||| ||||||||    
T  56323 aaaaagttgtaccaaatggttgttgaaatatca 56355  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 119935 - 120019
Alignment:
Q  59 attgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatcactactctttt 144  Q
    ||||||||| ||||||||||||||||| ||||||| ||| || ||  |||  ||| ||||||||||| ||||||||||||||||||    
T  119935 attgttttttaccaatgaaaagagagaaaaaagaaattgcca-cagtagtagtatcaaatggttgtttaaatatcactactctttt 120019  T

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Target: scaffold0154 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 9873 - 9737
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    ||||||||||||||||  ||||| ||||||||||| | ||||        ||||| ||||||||| ||||||||||||||| | |||| ||||||||| |    
T  9873 tttctctctcatactcgtattattctcttattctccctcttcttttttctctctctattgtttttgaccaatgaaaagagaaaaaaaataagttgtca-c 9775  T
Q  103 aaaagttttatgaaatggttgttcaaatatcactactc 140  Q
    |||||||   | | ||| ||||||||||| ||||||||    
T  9774 aaaagttgcctcatatgattgttcaaataacactactc 9737  T

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Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 11288 - 11336
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcac 101  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  11288 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcac 11336  T

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Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 11254 - 11290
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctc 39  Q
    |||||||| |||||||||||||| |||||||||||||    
T  11254 tttctctcacatactcacattatactcttattctctc 11290  T

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Target: scaffold0514 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 1521 - 1390
Alignment:
Q  3 tttctctctcatactcacattatcctcttattctctcacttcgnnnnnnnctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcacc 102  Q
    |||||||||||| ||||||| ||  |||||||||||| ||||        ||||||||||||||| |||||| | |||||||| |||  ||||||||||     
T  1521 tttctctctcattctcacatgatggtcttattctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcact 1422  T
Q  103 aaaagttttatgaaatggttgttcaaatatca 134  Q
    |||| | | ||| ||||| ||| |||||||||    
T  1421 aaaattgtcatggaatggatgtacaaatatca 1390  T

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Target: scaffold0514; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 1869 - 1834
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1869 ttctctctcatactcacattatcttcttattctctc 1834  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 48701 - 48736
Alignment:
Q  4 ttctctctcatactcacattatcctcttattctctc 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  48701 ttctctctcatactcacattatcttcttattctctc 48736  T

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Target: scaffold0576 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 9526 - 9607
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatca 134  Q
    ||||||||||||||| |||||| |||||||||  |||  ||||||||||||||  | | || |||||| ||| |||||||||    
T  9526 ctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatca 9607  T

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Target: scaffold0193 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 24769 - 24849
Alignment:
Q  53 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttttatgaaatggttgttcaaatatc 133  Q
    |||||||||||||||||||||| | |||||||| |||  | |||||||| |||| | | ||||||| | ||| ||||||||    
T  24769 ctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatc 24849  T

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