View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19045_low_9 (Length: 441)

Name: NF19045_low_9
Description: NF19045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19045_low_9
NF19045_low_9
[»] chr3 (40 HSPs)
chr3 (149-424)||(43804465-43804738)
chr3 (9-78)||(2754713-2754782)
chr3 (9-76)||(3574527-3574594)
chr3 (10-77)||(11347265-11347332)
chr3 (9-70)||(6041888-6041949)
chr3 (9-70)||(37217053-37217114)
chr3 (9-77)||(37522050-37522118)
chr3 (9-75)||(42297352-42297419)
chr3 (9-70)||(3456068-3456129)
chr3 (9-70)||(48160909-48160970)
chr3 (9-70)||(19650900-19650961)
chr3 (9-76)||(3137414-3137481)
chr3 (9-76)||(33113791-33113858)
chr3 (9-75)||(22426344-22426410)
chr3 (13-63)||(42921154-42921204)
chr3 (9-70)||(8320584-8320645)
chr3 (9-70)||(30385015-30385076)
chr3 (9-70)||(33145717-33145777)
chr3 (9-78)||(34482910-34482979)
chr3 (9-77)||(33839528-33839596)
chr3 (9-75)||(36865027-36865093)
chr3 (9-70)||(9797029-9797090)
chr3 (9-71)||(40328037-40328099)
chr3 (75-113)||(43804388-43804426)
chr3 (9-65)||(33839741-33839797)
chr3 (9-71)||(36864830-36864892)
chr3 (9-71)||(37522259-37522320)
chr3 (37-70)||(40327879-40327912)
chr3 (20-77)||(42921342-42921399)
chr3 (36-76)||(24343545-24343585)
chr3 (20-68)||(41224239-41224287)
chr3 (10-62)||(47738117-47738169)
chr3 (9-71)||(3137212-3137273)
chr3 (9-71)||(8361837-8361898)
chr3 (11-65)||(26612794-26612848)
chr3 (9-71)||(33145918-33145979)
chr3 (9-71)||(34482686-34482747)
chr3 (9-71)||(47738317-47738379)
chr3 (9-70)||(8362045-8362106)
chr3 (43-76)||(47402630-47402663)
[»] chr7 (23 HSPs)
chr7 (9-70)||(3961983-3962044)
chr7 (9-76)||(15329271-15329338)
chr7 (9-70)||(48880927-48880988)
chr7 (11-70)||(24394976-24395035)
chr7 (9-76)||(45637710-45637777)
chr7 (9-75)||(15577850-15577916)
chr7 (9-70)||(4974735-4974796)
chr7 (9-70)||(34482839-34482900)
chr7 (9-70)||(42611815-42611876)
chr7 (9-76)||(37477080-37477147)
chr7 (9-70)||(25167850-25167911)
chr7 (10-70)||(36790467-36790527)
chr7 (9-75)||(18036977-18037043)
chr7 (9-75)||(35444557-35444623)
chr7 (9-70)||(20010098-20010158)
chr7 (9-70)||(29737143-29737204)
chr7 (9-70)||(15238386-15238447)
chr7 (9-76)||(42696081-42696148)
chr7 (9-46)||(30848597-30848634)
chr7 (9-71)||(15238590-15238651)
chr7 (9-71)||(25167654-25167715)
chr7 (9-71)||(48880725-48880786)
chr7 (9-62)||(29737350-29737403)
[»] chr6 (23 HSPs)
chr6 (9-70)||(17705465-17705526)
chr6 (9-76)||(6127273-6127340)
chr6 (9-76)||(23291084-23291151)
chr6 (9-75)||(33695327-33695393)
chr6 (9-75)||(33696695-33696761)
chr6 (9-70)||(6031741-6031802)
chr6 (9-70)||(17176021-17176082)
chr6 (9-77)||(18365573-18365641)
chr6 (9-77)||(18370837-18370905)
chr6 (9-76)||(28675146-28675213)
chr6 (9-70)||(8515725-8515786)
chr6 (10-75)||(18889698-18889762)
chr6 (9-70)||(25986934-25986995)
chr6 (9-78)||(11548588-11548657)
chr6 (10-71)||(29693652-29693713)
chr6 (9-76)||(2309423-2309490)
chr6 (9-63)||(32702216-32702270)
chr6 (9-71)||(34238885-34238946)
chr6 (10-71)||(32702412-32702472)
chr6 (9-71)||(17705267-17705328)
chr6 (9-71)||(28675354-28675415)
chr6 (9-71)||(33696903-33696964)
chr6 (9-77)||(9752245-9752312)
[»] chr5 (28 HSPs)
chr5 (9-77)||(2477633-2477701)
chr5 (9-70)||(11361131-11361192)
chr5 (9-77)||(4892199-4892267)
chr5 (9-70)||(25398242-25398303)
chr5 (9-70)||(33584329-33584390)
chr5 (9-77)||(8145372-8145440)
chr5 (9-76)||(6043511-6043578)
chr5 (9-70)||(37321793-37321855)
chr5 (11-75)||(3362777-3362841)
chr5 (11-75)||(38899728-38899792)
chr5 (9-76)||(14138666-14138733)
chr5 (9-70)||(22913054-22913115)
chr5 (11-70)||(12850805-12850864)
chr5 (9-70)||(3522006-3522067)
chr5 (9-70)||(4434007-4434068)
chr5 (9-70)||(12614733-12614794)
chr5 (9-70)||(17545685-17545746)
chr5 (11-71)||(3362987-3363046)
chr5 (9-71)||(3521805-3521866)
chr5 (9-71)||(6043310-6043371)
chr5 (20-70)||(27481830-27481880)
chr5 (9-62)||(10458409-10458462)
chr5 (9-71)||(4892408-4892469)
chr5 (9-71)||(12614535-12614597)
chr5 (9-71)||(17545480-17545541)
chr5 (9-71)||(33584127-33584188)
chr5 (11-72)||(12851010-12851070)
chr5 (11-71)||(38899523-38899583)
[»] chr2 (26 HSPs)
chr2 (9-75)||(35160756-35160822)
chr2 (9-70)||(10661891-10661952)
chr2 (9-78)||(9293576-9293645)
chr2 (9-76)||(23268062-23268129)
chr2 (9-75)||(7475508-7475574)
chr2 (9-70)||(21936085-21936146)
chr2 (9-70)||(33380211-33380272)
chr2 (10-77)||(13354843-13354910)
chr2 (9-70)||(9723409-9723470)
chr2 (9-70)||(31174834-31174895)
chr2 (9-76)||(43330910-43330977)
chr2 (9-75)||(14941366-14941432)
chr2 (9-70)||(21393688-21393749)
chr2 (9-76)||(27847630-27847697)
chr2 (9-71)||(9723612-9723674)
chr2 (9-71)||(22592918-22592980)
chr2 (9-71)||(10662094-10662155)
chr2 (9-71)||(23267860-23267921)
chr2 (9-46)||(3989104-3989141)
chr2 (11-74)||(31174630-31174692)
chr2 (9-71)||(9293373-9293434)
chr2 (9-71)||(21393484-21393544)
chr2 (9-71)||(33380413-33380474)
chr2 (9-71)||(35160965-35161026)
chr2 (9-62)||(22591494-22591547)
chr2 (37-70)||(40262714-40262747)
[»] scaffold0178 (2 HSPs)
scaffold0178 (9-70)||(11625-11686)
scaffold0178 (9-71)||(11827-11888)
[»] chr8 (41 HSPs)
chr8 (9-78)||(1645965-1646034)
chr8 (9-78)||(32064741-32064810)
chr8 (9-70)||(32393862-32393923)
chr8 (9-76)||(26042116-26042183)
chr8 (9-76)||(37986055-37986122)
chr8 (9-70)||(14128868-14128929)
chr8 (9-78)||(17841850-17841919)
chr8 (9-70)||(34665386-34665447)
chr8 (9-70)||(35353045-35353106)
chr8 (9-77)||(40780129-40780197)
chr8 (9-76)||(42755042-42755109)
chr8 (10-76)||(15187558-15187624)
chr8 (9-70)||(8453838-8453899)
chr8 (9-70)||(20091801-20091862)
chr8 (9-70)||(24211553-24211614)
chr8 (9-66)||(38016979-38017036)
chr8 (9-76)||(6108233-6108300)
chr8 (9-78)||(31347782-31347851)
chr8 (9-70)||(37132658-37132719)
chr8 (9-78)||(39772801-39772870)
chr8 (9-75)||(41819778-41819844)
chr8 (17-77)||(24844866-24844926)
chr8 (9-76)||(7017865-7017932)
chr8 (9-71)||(32064952-32065013)
chr8 (9-70)||(27782117-27782178)
chr8 (9-69)||(25581239-25581299)
chr8 (11-71)||(30834853-30834913)
chr8 (9-77)||(37132472-37132540)
chr8 (9-64)||(7021988-7022043)
chr8 (9-71)||(3890412-3890474)
chr8 (9-71)||(6108031-6108092)
chr8 (9-70)||(30835047-30835107)
chr8 (20-71)||(42754840-42754890)
chr8 (9-71)||(1503641-1503702)
chr8 (9-71)||(3596839-3596900)
chr8 (9-71)||(17841648-17841709)
chr8 (9-71)||(25581037-25581098)
chr8 (9-71)||(26041911-26041972)
chr8 (20-70)||(27835464-27835514)
chr8 (5-71)||(38017135-38017200)
chr8 (9-71)||(40779927-40779988)
[»] chr4 (40 HSPs)
chr4 (9-70)||(7745112-7745173)
chr4 (9-77)||(10442789-10442857)
chr4 (9-75)||(31078819-31078885)
chr4 (9-78)||(21802322-21802391)
chr4 (9-70)||(22199265-22199326)
chr4 (9-78)||(23964465-23964534)
chr4 (9-70)||(49387888-49387949)
chr4 (9-77)||(24128236-24128304)
chr4 (9-77)||(47290063-47290131)
chr4 (11-70)||(36072951-36073010)
chr4 (9-76)||(36073348-36073415)
chr4 (9-76)||(50156578-50156645)
chr4 (9-75)||(33530688-33530754)
chr4 (9-70)||(2624841-2624902)
chr4 (11-75)||(4751445-4751509)
chr4 (9-77)||(24392664-24392732)
chr4 (9-77)||(44893423-44893491)
chr4 (9-68)||(42671675-42671734)
chr4 (9-75)||(53123029-53123096)
chr4 (9-70)||(46441848-46441909)
chr4 (10-76)||(24128446-24128511)
chr4 (9-71)||(37219837-37219899)
chr4 (10-71)||(17655637-17655698)
chr4 (9-61)||(36073743-36073795)
chr4 (20-75)||(37934952-37935007)
chr4 (9-75)||(44893213-44893280)
chr4 (9-71)||(11314049-11314111)
chr4 (9-71)||(25063372-25063434)
chr4 (9-71)||(42671874-42671936)
chr4 (9-71)||(44893011-44893072)
chr4 (9-71)||(44893632-44893693)
chr4 (9-71)||(9089076-9089137)
chr4 (9-71)||(21802118-21802179)
chr4 (9-71)||(36073555-36073616)
chr4 (9-71)||(46442050-46442111)
chr4 (9-71)||(50156377-50156438)
chr4 (9-71)||(53123237-53123298)
chr4 (9-46)||(9088898-9088935)
chr4 (11-71)||(4751655-4751714)
chr4 (21-77)||(24392892-24392947)
[»] scaffold0204 (2 HSPs)
scaffold0204 (9-77)||(4393-4461)
scaffold0204 (9-71)||(4602-4663)
[»] chr1 (25 HSPs)
chr1 (9-77)||(16045798-16045866)
chr1 (9-77)||(18404439-18404507)
chr1 (9-76)||(25463674-25463741)
chr1 (9-70)||(3559621-3559682)
chr1 (9-70)||(40214992-40215053)
chr1 (9-75)||(41876442-41876508)
chr1 (9-70)||(9910293-9910354)
chr1 (9-70)||(44094702-44094763)
chr1 (9-76)||(19015402-19015469)
chr1 (11-70)||(32000269-32000328)
chr1 (9-70)||(36966708-36966769)
chr1 (9-70)||(37821834-37821895)
chr1 (9-77)||(27523255-27523325)
chr1 (9-70)||(6883491-6883552)
chr1 (9-77)||(40273699-40273767)
chr1 (9-76)||(25973412-25973478)
chr1 (12-71)||(52064375-52064434)
chr1 (9-71)||(25973613-25973674)
chr1 (9-71)||(37821632-37821693)
chr1 (9-78)||(44690812-44690881)
chr1 (9-71)||(18404654-18404715)
chr1 (9-71)||(19015610-19015671)
chr1 (37-75)||(34519757-34519795)
chr1 (37-75)||(51620979-51621017)
chr1 (9-71)||(51737711-51737772)
[»] scaffold0665 (1 HSPs)
scaffold0665 (9-70)||(3072-3133)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-78)||(41007-41076)
[»] scaffold0471 (2 HSPs)
scaffold0471 (9-77)||(12839-12907)
scaffold0471 (10-76)||(13049-13114)
[»] scaffold0085 (1 HSPs)
scaffold0085 (9-70)||(47854-47915)
[»] scaffold0228 (5 HSPs)
scaffold0228 (9-63)||(8413-8467)
scaffold0228 (9-63)||(15995-16049)
scaffold0228 (9-63)||(25947-26001)
scaffold0228 (9-71)||(16190-16251)
scaffold0228 (9-71)||(26142-26203)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 149 - 424
Target Start/End: Original strand, 43804465 - 43804738
Alignment:
Q  149 gcttgaacacagcttttaatacaatgtttttgattnnnnnnnntccaatccaatacaatgtttccatatttagttcactgacaagtgattttaggatgtg 248  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  43804465 gcttgaacacagcttttaatacaatgtttttgattaaaaaaa-tccaatccaatacaatgtttccatatttagttcactgacaagtgtttttagggtgtg 43804563  T
Q  249 tattaacattaatttgtctttaattatttttcagtcaatgtaatttcatgagtgcatactgtttggtagtcagtttcaacagaagtctttcattaccggc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||||||    
T  43804564 tattaacattaatttgtctttaattatttttcagtcaatgtaatttcatgagtgtatactttttggtagtcagtttcaatagaagtcttccattaccggc 43804663  T
Q  349 atgaattgagtttagcagaaggggttagactcctacatcgtgttaaactaagatttatatttagttgtgagagata 424  Q
    ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43804664 atgaattgagtctagcaggagggattagact-ctacatcgtgttgaactaagatttatatttagttgtgagagata 43804738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 2754782 - 2754713
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctttt 2754713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 3574527 - 3574594
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 3574594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 11347332 - 11347265
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttt 11347265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6041949 - 6041888
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37217053 - 37217114
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 37522118 - 37522050
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctcttt 37522050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 42297419 - 42297352
Alignment:
Q  9 gattattct-gtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42297419 gattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 42297352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3456129 - 3456068
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 48160970 - 48160909
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 19650900 - 19650961
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacatt 19650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 3137414 - 3137481
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 3137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 33113858 - 33113791
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 33113791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 22426344 - 22426410
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctct 22426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 42921204 - 42921154
Alignment:
Q  13 attctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42921204 attcggtcatgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8320584 - 8320645
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacatt 8320645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 30385076 - 30385015
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33145777 - 33145717
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 34482910 - 34482979
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||  ||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctttt 34482979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 33839596 - 33839528
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||| |||| ||||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctcttt 33839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 36865027 - 36865093
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||  ||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctct 36865093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 9797029 - 9797090
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||| ||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 40328037 - 40328099
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  40328037 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattt 40328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 43804388 - 43804426
Alignment:
Q  75 ttttggcatttgttaaggatttcaaaaatataattgtct 113  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43804388 ttttggcatttgttaaggatttcaaaaatataattgtct 43804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 33839741 - 33839797
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatata 65  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||||    
T  33839741 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 36864892 - 36864830
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  ||| ||||||||||| |||||||||| ||||||||    
T  36864892 gattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattt 36864830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 37522259 - 37522320
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 37522320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 40327912 - 40327879
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcatt 40327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 42921342 - 42921399
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||||||||  ||||||||||||||| ||||| |||| |||||||| |||||    
T  42921342 catgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttttcttt 42921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 24343585 - 24343545
Alignment:
Q  36 ttttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  24343585 ttttcttgataaaatctttcttaatatatagcattgctctt 24343545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41224287 - 41224239
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagca 68  Q
    |||||||||||| || ||||||||| |||||||||||| ||||||||||    
T  41224287 catgtcattcttgaatttttcttgagaaaatctttcttaatatatagca 41224239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||| ||| |||||||| ||  ||||||||||||||||||||||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3137273 - 3137212
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 3137212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 8361898 - 8361837
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  ||||||||| ||||| |||||||||| ||||||||    
T  8361898 gattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattt 8361837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26612848 - 26612794
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatata 65  Q
    |||||||| |||||||||||| || |||| || ||||||||||| ||||||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatata 26612794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 33145918 - 33145979
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  33145918 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 33145979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 34482747 - 34482686
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 34482686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 47738317 - 47738379
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| ||  ||||||||||||||| |||||||||| || |||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattt 47738379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8362045 - 8362106
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || ||||||||| |   | |||||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcatt 8362106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 47402630 - 47402663
Alignment:
Q  43 gataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||||||||||||||||||||| |||||    
T  47402630 gataaaatctttcttgatatatagcattgctctt 47402663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3962044 - 3961983
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 15329338 - 15329271
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 48880927 - 48880988
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 24395035 - 24394976
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 45637777 - 45637710
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 45637710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 15577850 - 15577916
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4974735 - 4974796
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34482900 - 34482839
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 42611876 - 42611815
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37477080 - 37477147
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctctt 37477147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25167850 - 25167911
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 36790467 - 36790527
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 18037043 - 18036977
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctct 18036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35444623 - 35444557
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 20010098 - 20010158
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20010098 gattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 20010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 29737204 - 29737143
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||  ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 15238447 - 15238386
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || ||||||||| ||| | |||||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 15238386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 42696148 - 42696081
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||||||  |||||||||||||||  || || |||||||||||||||||||||| |||| |||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctctt 42696081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 30848634 - 30848597
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgata 46  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30848634 gattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 15238590 - 15238651
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||||||  ||| ||||| ||||| |||||||||| ||||||||    
T  15238590 gattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattt 15238651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25167715 - 25167654
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 25167654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 48880786 - 48880725
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 48880725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 29737350 - 29737403
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| || ||||| |||||||||  ||||||||||||||| ||||||||||    
T  29737350 gattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 17705465 - 17705526
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 6127340 - 6127273
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 6127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23291084 - 23291151
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 23291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 33695327 - 33695393
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33696761 - 33696695
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 6031741 - 6031802
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcatt 6031802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 17176021 - 17176082
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 18365573 - 18365641
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctcttt 18365641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 18370837 - 18370905
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctcttt 18370905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 28675213 - 28675146
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 28675146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8515725 - 8515786
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 18889698 - 18889762
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctct 18889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25986995 - 25986934
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 11548588 - 11548657
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| || ||||||||| ||||| ||||||||||||||||| | |||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagcaatactctttt 11548657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 29693652 - 29693713
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||| ||||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattt 29693713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 2309423 - 2309490
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||| |||||||||||   | ||||||||||||||||||||||||| |||| |||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctctt 2309490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 32702270 - 32702216
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| ||| |||||||| |||||||| ||| ||||||||||||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 34238946 - 34238885
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || | |||||||||||||| |||||||||| ||||||||    
T  34238946 gattattgtgtcatgtcattcttgaa-tcttcttgataaaatcattcttgatatctagcattt 34238885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 32702412 - 32702472
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  32702412 attattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 32702472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 17705328 - 17705267
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  17705328 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 17705267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 28675354 - 28675415
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  28675354 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 28675415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 33696903 - 33696964
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  33696903 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattt 33696964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 9752245 - 9752312
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| ||| |||||||| || |||||||||| || | |||||||||||||| |||| ||||||    
T  9752245 gattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctcttt 9752312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 2477701 - 2477633
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttt 2477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 11361131 - 11361192
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 4892267 - 4892199
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 4892199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25398303 - 25398242
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33584329 - 33584390
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 8145440 - 8145372
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattcctcttt 8145372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 6043511 - 6043578
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 6043578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37321793 - 37321855
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttctt-gatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcatt 37321855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3362841 - 3362777
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 38899728 - 38899792
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 14138733 - 14138666
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 14138666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 22913054 - 22913115
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 12850864 - 12850805
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 3522006 - 3522067
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||||||||||||| ||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacatt 3522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4434007 - 4434068
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||| |||||||||| | |||||||||||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 12614733 - 12614794
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||| ||  |||||||||||||| |||||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 17545685 - 17545746
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || ||||||||| ||| | |||||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 17545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 3362987 - 3363046
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||| |||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  3362987 ttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 3363046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3521866 - 3521805
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 3521805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 6043371 - 6043310
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 6043310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27481880 - 27481830
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||| || |||||||||||||||||||||| ||| ||||||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| || |||||||||||| || ||||||||||||||| |||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 4892408 - 4892469
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 4892469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 12614597 - 12614535
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||||||  ||| ||||||||||| | |||||||| ||||||||    
T  12614597 gattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattt 12614535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 17545541 - 17545480
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||||||  ||| ||||| ||||| |||||||||| ||||||||    
T  17545541 gattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattt 17545480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 33584188 - 33584127
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 33584127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 12851010 - 12851070
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttc 72  Q
    ||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||||    
T  12851010 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttc 12851070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 38899583 - 38899523
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||| || |||||||||||| || |||| || |||||||| |||||||||| ||||||||    
T  38899583 ttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattt 38899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35160822 - 35160756
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 10661952 - 10661891
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 9293576 - 9293645
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctctttt 9293645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23268062 - 23268129
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 23268129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7475508 - 7475574
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 7475574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21936146 - 21936085
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33380272 - 33380211
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 13354910 - 13354843
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctcttt 13354843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 9723470 - 9723409
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 31174834 - 31174895
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 43330977 - 43330910
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| || |||| |||| ||||||||||||||||||||||||| |||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctctt 43330910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 14941366 - 14941432
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| ||  |||||| ||||||||||||||||||||||||||| ||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctct 14941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 21393688 - 21393749
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 27847697 - 27847630
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||| ||||| |||||| |||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctctt 27847630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 9723612 - 9723674
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| |||||||||| || |||||    
T  9723612 gattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattt 9723674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 22592918 - 22592980
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  22592918 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattt 22592980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 10662094 - 10662155
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  10662094 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 10662155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 23267921 - 23267860
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 23267860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 3989141 - 3989104
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgata 46  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3989141 gattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 31174692 - 31174630
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctc 74  Q
    ||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||||||    
T  31174692 ttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttctc 31174630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 9293434 - 9293373
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  9293434 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 9293373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 21393544 - 21393484
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| |||||||||||||||  |||||||||||| ||||| |||||||||| ||||||||    
T  21393544 gattattgtgtcatgtcattctt-gaattttcttgat-aaatcattcttgatatctagcattt 21393484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 33380413 - 33380474
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 33380474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 35160965 - 35161026
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 35161026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| ||| |||||||| || |||| || |||||||||||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 40262714 - 40262747
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||||||||| ||||    
T  40262714 tttcttgataaaatctttcttgatatataacatt 40262747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 11686 - 11625
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 11827 - 11888
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| || |||||    
T  11827 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattt 11888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 1645965 - 1646034
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctctttt 1646034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 32064810 - 32064741
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctttt 32064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 32393923 - 32393862
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 26042116 - 26042183
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctctt 26042183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37986055 - 37986122
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactctt 37986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 14128929 - 14128868
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 17841850 - 17841919
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctttt 17841919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34665447 - 34665386
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 35353106 - 35353045
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 40780129 - 40780197
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 40780197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 42755042 - 42755109
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctctt 42755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 15187624 - 15187558
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 8453899 - 8453838
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  8453899 gattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 20091801 - 20091862
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 24211553 - 24211614
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcatt 24211614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatag 66  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 6108233 - 6108300
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctctt 6108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 31347782 - 31347851
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| || ||||||||| ||||| ||||||||||||||||||| |||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctctttt 31347851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37132658 - 37132719
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 39772801 - 39772870
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||| |||| |||||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctctttt 39772870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 41819778 - 41819844
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||| |||| ||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 24844866 - 24844926
Alignment:
Q  17 tgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||||||||||| || ||||||| ||||||| ||||||||||| ||||||||||||||    
T  24844866 tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatttctcttt 24844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 7017865 - 7017932
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| || ||||||| | |||||||||| |||||||||||||| |||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctctt 7017932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 32064952 - 32065013
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  32064952 gattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 32065013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 27782117 - 27782178
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||| || ||  |||||||||||||| |||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 69  Q
    ||||||| || |||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 30834913 - 30834853
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||||||||||||||||| ||  ||||||||||||||| |||||||||| || |||||    
T  30834913 ttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattt 30834853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 37132540 - 37132472
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||| ||||||||||||| | ||  ||||||||||||||| |||||||||| |||||||| |||||    
T  37132540 gattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttttcttt 37132472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatat 64  Q
    |||||||||| ||| |||||||| || ||||||||| |||||||||||||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3890474 - 3890412
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||||||| ||| |||||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 6108092 - 6108031
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  6108092 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 6108031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 30835047 - 30835107
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| || |||| | ||||||||||||||||||||||| ||||    
T  30835047 gattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 42754890 - 42754840
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  42754890 catgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 42754840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1503702 - 1503641
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 1503641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3596900 - 3596839
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  3596900 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 3596839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 17841709 - 17841648
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 17841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25581098 - 25581037
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  25581098 gattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 25581037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 26041972 - 26041911
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 26041911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 27835464 - 27835514
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||| || ||||||| |||| |||||| |||||||||||||||    
T  27835464 catgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 38017135 - 38017200
Alignment:
Q  5 ggtagattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||| |||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  38017135 ggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 38017200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 40779988 - 40779927
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 40779927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 7745112 - 7745173
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 10442789 - 10442857
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcttt 10442857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 31078819 - 31078885
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 31078885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 21802322 - 21802391
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctctttt 21802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 22199326 - 22199265
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 23964465 - 23964534
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctctttt 23964534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 49387888 - 49387949
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 24128304 - 24128236
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 24128236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 47290131 - 47290063
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 47290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 36073010 - 36072951
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 36073415 - 36073348
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctctt 36073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 50156578 - 50156645
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctctt 50156645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 33530688 - 33530754
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 2624902 - 2624841
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 4751509 - 4751445
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 4751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 24392732 - 24392664
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctcttt 24392664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 44893491 - 44893423
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctcttt 44893423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagca 68  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 53123096 - 53123029
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| |||||||||| || ||||||||||||||||||||||||| ||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctct 53123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 46441909 - 46441848
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| |||||||||| | |||||||||||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 24128446 - 24128511
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||| ||||    
T  24128446 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctt 24128511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 37219837 - 37219899
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||||||| |||||||||||||||  ||||||||||||||| |||||||||| || |||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattt 37219899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 17655637 - 17655698
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||| ||||||||||||||||||  ||||||||||||||| ||||| |||| ||||||||    
T  17655637 attattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcattt 17655698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 36073743 - 36073795
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgata 61  Q
    ||||||| ||||||||||||||||||  |||||| ||||||||||||||||||    
T  36073743 gattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 37934952 - 37935007
Alignment:
Q  20 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||    
T  37934952 catgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctct 37935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 44893213 - 44893280
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||| ||||||| || || |||||||||||| |||||||||||| ||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctct 44893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 11314111 - 11314049
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| |||||||||||||||  |  ||||||||||||||| |||||||||| ||||||||    
T  11314111 gattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattt 11314049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25063434 - 25063372
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||||||  |||||||||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattt 25063372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 42671874 - 42671936
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| |||||||||| || |||||    
T  42671874 gattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattt 42671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 44893072 - 44893011
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 44893011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 44893632 - 44893693
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 44893693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 9089076 - 9089137
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 9089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 21802179 - 21802118
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||||    
T  21802179 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 21802118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 36073555 - 36073616
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 36073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 46442050 - 46442111
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 46442111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 50156438 - 50156377
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| || |||||    
T  50156438 gattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattt 50156377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 53123237 - 53123298
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 53123298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 9088935 - 9088898
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgata 46  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 4751655 - 4751714
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||| || ||||||||||||||| ||||||| |||||||  |||||||||| ||||||||    
T  4751655 ttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcattt 4751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 24392892 - 24392947
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||||||||||  ||||||||| ||||| |||||||||| |||||||| |||||    
T  24392892 atgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttttcttt 24392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 4461 - 4393
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 4393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 4602 - 4663
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  4602 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattt 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 16045798 - 16045866
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattactcttt 16045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 18404507 - 18404439
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttt 18404439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25463741 - 25463674
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctctt 25463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3559682 - 3559621
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 40215053 - 40214992
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 41876442 - 41876508
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 9910293 - 9910354
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 44094763 - 44094702
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 19015469 - 19015402
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 19015402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 32000269 - 32000328
Alignment:
Q  11 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 36966708 - 36966769
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37821834 - 37821895
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 27523255 - 27523325
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttga--tatatagcatttctcttt 77  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||  ||||||||||| ||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctcttt 27523325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6883552 - 6883491
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||| ||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 40273767 - 40273699
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    ||||||| || |||||||||||| || ||||||||| ||||||||||||||||| ||||||| ||||||    
T  40273767 gattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctcttt 40273699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25973478 - 25973412
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| |||| |||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctctt 25973412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 52064434 - 52064375
Alignment:
Q  12 tattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    |||||||||||||||||||| ||  ||||||||||||||| || ||||||| ||||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattt 52064375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25973613 - 25973674
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  25973613 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 25973674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 37821693 - 37821632
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  37821693 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 37821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 44690881 - 44690812
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| ||  ||||||||||||||| || ||||||| || ||||| ||||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttctttt 44690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 18404654 - 18404715
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  18404654 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattt 18404715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 19015610 - 19015671
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcattt 19015671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 34519795 - 34519757
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctct 34519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 51621017 - 51620979
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcatttctct 75  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctct 51620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 51737711 - 51737772
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 51737772  T

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Target: scaffold0665 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3133 - 3072
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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Target: scaffold0096 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 41076 - 41007
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctttt 78  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctttt 41007  T

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Target: scaffold0471 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 12907 - 12839
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctcttt 77  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttt 12839  T

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Target: scaffold0471; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 13049 - 13114
Alignment:
Q  10 attattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatttctctt 76  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||| ||||    
T  13049 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttctt 13114  T

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Target: scaffold0085 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 47915 - 47854
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

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Target: scaffold0228 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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Target: scaffold0228; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 16190 - 16251
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 16251  T

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Target: scaffold0228; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 26142 - 26203
Alignment:
Q  9 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattt 71  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| ||||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 26203  T

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