View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19046_low_22 (Length: 258)
Name: NF19046_low_22
Description: NF19046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19046_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 10658565 - 10658745
Alignment:
| Q |
60 |
gaatttgagggaccttgaacaggttcatcttgggaggagaactcttcaatatcatcacaatcatcaacatcgatgtcaacgacaaacgaaggcggtggtg |
159 |
Q |
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| T |
10658565 |
gaatttgagggaccttgaacaggttcatcttgggaggagaactcttcaatatcatcataatcatcaacatcgatgtcaacgacaaacaaaggcggtggtg |
10658664 |
T |
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| Q |
160 |
gttcagttgggcggcgaacgaaggaggaggaggaaggtagaccgcgacggagacgtttgagaatacgacgaggtggaggat |
240 |
Q |
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| T |
10658665 |
gttcagttgggcggcgaacgaaggaggaggaggaaggtagaccgcgacggagacggctgagaatacgacgaggtggaggat |
10658745 |
T |
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