View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19046_low_24 (Length: 255)
Name: NF19046_low_24
Description: NF19046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19046_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 5906558 - 5906799
Alignment:
| Q |
2 |
agcaaaggaagtccaggtaattgaactatctcattagggttattcaaatcaggaaatgaattaacattcctaaagtaacgataagaaatagaaaatgtag |
101 |
Q |
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| T |
5906558 |
agcaaaggaagtccaggtaattgaactatctcattagggttattcaaatcaggaaatgaattaacattcctaaagtaacgataagaaatagaaaatgtag |
5906657 |
T |
|
| Q |
102 |
cacaaggttgcatccaaagaaatgcaacgggtatgttaagttcattagaaacattttcaatatttgtcaacaaaacaggatcaacaattatgcaataata |
201 |
Q |
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| T |
5906658 |
cacaaggttgcatccaaagaaatgcaacgggtatgttaagttcattagaaacattttcaatatttgtcaacaaaacaggatcaacaattatgcaataata |
5906757 |
T |
|
| Q |
202 |
gtcacgtactttggcaaggtttgttatgagtgttgacatatt |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
5906758 |
gtcacgtactttggcaaggtttgttatgagtgttgacatatt |
5906799 |
T |
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