View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19047_high_5 (Length: 472)
Name: NF19047_high_5
Description: NF19047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19047_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 15 - 453
Target Start/End: Original strand, 42247094 - 42247510
Alignment:
| Q |
15 |
tcctatatatcagatcggacaccggagatagttaataatcggctcgtggaaagtcaactctactacagatactactaattagtttttagtttggaaccta |
114 |
Q |
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|||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
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| T |
42247094 |
tcctatatatcagaccggacaccggaggtagttagtaatcggctcgtggaaagtcaactctactacagatattactaattaatttttagtttggaaccta |
42247193 |
T |
|
| Q |
115 |
tagnnnnnnnnnnnnnnnnnnnnncaatcttacaaagagcaactcacaaattagcacttgacttgtgtgttacactcacactagctagctagtttattct |
214 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42247194 |
tagaaaccaaaaacaaaacaaaaccaatcttacaaagagcaactcacaaattagcacttgacttgtgtgttacactcacactagctagctagtttattct |
42247293 |
T |
|
| Q |
215 |
atttggttattctcggttttttgtacattcaggataagttaaactggtgttcgatcagaagtagtttagttattgataaatcattccatttaaggatagt |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42247294 |
gtttggttattctcggttttttgtacattcaggataagttaaactggtgttcaatcagaagtagtttagttattgataaatcattccatttaaggatagt |
42247393 |
T |
|
| Q |
315 |
caacgaaatgatcaagtggtttatggaactatattgtatggtattgttcatgctattgaatagtacgtaccattgtaagttccactcatgactcaccaca |
414 |
Q |
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|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42247394 |
caacgaaatgatcaagtgttttatggaactatatt----------------------gaatagtacgtaccattgtaagttccactcatgactcaccaca |
42247471 |
T |
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| Q |
415 |
tgatttttgggtgttaacttcagaagtgccacattgtat |
453 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
42247472 |
tgatttttgggtgttaacttcagaagtgccacattgtat |
42247510 |
T |
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