View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19049_low_7 (Length: 285)
Name: NF19049_low_7
Description: NF19049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19049_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 3205453 - 3205711
Alignment:
| Q |
13 |
aatatgatagaaatcgcaccattaaagtagttttcatgtagaattacacttgctcttgatctgatttgatgtctttgtatctccagattttccactaatg |
112 |
Q |
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| T |
3205453 |
aatatgatagaaatcgcaccattaaagtagttttcatgtagaattacacttgctcttgatctgatttgatgtctttgtatctccagattttccactaatg |
3205552 |
T |
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| Q |
113 |
attaacaaatataaggaaagatgattaaacaattagaaagtcaaaaactaaactgaaatagaaactcattaaataatattcttctgaaatggggaggaag |
212 |
Q |
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| T |
3205553 |
attaacaaatataaggaaagatgatcaaacaattagaaagtcaaaaactaaactgaaatagaaactcattaaataatattcttctgaaatggggaggaag |
3205652 |
T |
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| Q |
213 |
taattatcataatgaacaataaatgtgatgataaacagattccagttaatattgttagt |
271 |
Q |
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| T |
3205653 |
taattatcataatgaacaataaatgtgatgataaacagattccagttaatattgttagt |
3205711 |
T |
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