View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19049_low_8 (Length: 249)

Name: NF19049_low_8
Description: NF19049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19049_low_8
NF19049_low_8
[»] chr1 (49 HSPs)
chr1 (1-239)||(34658330-34658568)
chr1 (63-186)||(37734779-37734902)
chr1 (52-186)||(639810-639944)
chr1 (52-186)||(33603986-33604120)
chr1 (52-186)||(48022606-48022740)
chr1 (63-186)||(40262474-40262595)
chr1 (47-186)||(3384213-3384352)
chr1 (51-186)||(8257937-8258072)
chr1 (52-186)||(31008270-31008404)
chr1 (51-186)||(4060182-4060317)
chr1 (66-193)||(5856370-5856493)
chr1 (63-188)||(15439868-15439993)
chr1 (52-186)||(6065456-6065590)
chr1 (52-186)||(27206770-27206904)
chr1 (63-186)||(4602650-4602773)
chr1 (52-150)||(14418104-14418202)
chr1 (63-195)||(2349762-2349895)
chr1 (78-199)||(2352916-2353037)
chr1 (52-185)||(8257955-8258088)
chr1 (52-151)||(35367524-35367623)
chr1 (52-190)||(31008254-31008392)
chr1 (63-190)||(3384230-3384357)
chr1 (126-186)||(17490499-17490559)
chr1 (46-116)||(37734854-37734924)
chr1 (51-165)||(38468718-38468832)
chr1 (51-116)||(639793-639858)
chr1 (52-116)||(23944032-23944096)
chr1 (101-165)||(26344252-26344316)
chr1 (52-116)||(33604072-33604136)
chr1 (52-116)||(48022590-48022654)
chr1 (52-186)||(6065472-6065606)
chr1 (132-185)||(1358185-1358237)
chr1 (63-112)||(17490494-17490543)
chr1 (64-116)||(2352976-2353028)
chr1 (118-166)||(21321379-21321427)
chr1 (63-119)||(21321396-21321452)
chr1 (49-112)||(1035972-1036035)
chr1 (63-186)||(4060177-4060300)
chr1 (104-183)||(5595467-5595546)
chr1 (99-165)||(8465958-8466024)
chr1 (123-193)||(11324499-11324569)
chr1 (123-193)||(11482520-11482590)
chr1 (107-193)||(50550123-50550209)
chr1 (63-96)||(39515066-39515099)
chr1 (52-116)||(40262549-40262611)
chr1 (52-116)||(5856438-5856502)
chr1 (107-183)||(13877035-13877111)
chr1 (123-191)||(21444210-21444278)
chr1 (52-116)||(27206754-27206818)
[»] chr5 (37 HSPs)
chr5 (52-193)||(3851367-3851508)
chr5 (52-193)||(19531296-19531437)
chr5 (63-193)||(15712127-15712257)
chr5 (52-186)||(23914852-23914986)
chr5 (63-186)||(42013833-42013956)
chr5 (52-169)||(38835520-38835637)
chr5 (63-186)||(11262339-11262462)
chr5 (52-186)||(26300122-26300256)
chr5 (63-186)||(37944613-37944736)
chr5 (63-190)||(13157340-13157466)
chr5 (63-193)||(35969134-35969265)
chr5 (52-149)||(43446854-43446951)
chr5 (63-186)||(8961230-8961353)
chr5 (63-194)||(37870020-37870151)
chr5 (93-199)||(21945416-21945522)
chr5 (63-186)||(13311186-13311308)
chr5 (63-186)||(13157339-13157461)
chr5 (52-190)||(8961214-8961352)
chr5 (52-186)||(26300106-26300240)
chr5 (63-185)||(42013828-42013950)
chr5 (64-185)||(19531313-19531434)
chr5 (63-195)||(37944608-37944740)
chr5 (64-186)||(3851370-3851492)
chr5 (46-191)||(38835531-38835677)
chr5 (63-116)||(11262334-11262387)
chr5 (103-156)||(35172476-35172529)
chr5 (52-116)||(23914836-23914900)
chr5 (103-168)||(12165313-12165378)
chr5 (52-116)||(21945461-21945525)
chr5 (99-166)||(14416437-14416504)
chr5 (135-190)||(15712128-15712183)
chr5 (138-193)||(31706040-31706095)
chr5 (64-186)||(35969139-35969262)
chr5 (52-165)||(12750113-12750226)
chr5 (123-168)||(35969070-35969115)
chr5 (123-168)||(42364249-42364294)
chr5 (69-185)||(14064823-14064937)
[»] chr3 (47 HSPs)
chr3 (52-190)||(38455172-38455310)
chr3 (52-186)||(51617326-51617460)
chr3 (51-190)||(52168277-52168416)
chr3 (51-190)||(29565103-29565242)
chr3 (52-186)||(29720071-29720205)
chr3 (52-176)||(17552472-17552596)
chr3 (52-186)||(41349655-41349790)
chr3 (52-186)||(50260944-50261079)
chr3 (64-186)||(52315401-52315523)
chr3 (63-186)||(36362615-36362738)
chr3 (64-190)||(32758973-32759099)
chr3 (52-186)||(42449116-42449250)
chr3 (52-184)||(33412478-33412610)
chr3 (64-186)||(21403904-21404023)
chr3 (88-166)||(29512162-29512240)
chr3 (52-186)||(51239254-51239388)
chr3 (68-188)||(22153068-22153188)
chr3 (88-186)||(52931652-52931750)
chr3 (68-168)||(22173806-22173906)
chr3 (57-168)||(22099779-22099890)
chr3 (63-185)||(37492387-37492509)
chr3 (70-186)||(33412478-33412594)
chr3 (67-193)||(52315400-52315526)
chr3 (64-165)||(18939970-18940077)
chr3 (135-196)||(18939964-18940025)
chr3 (63-116)||(29720157-29720210)
chr3 (50-190)||(36362597-36362737)
chr3 (63-166)||(42449111-42449214)
chr3 (47-165)||(12744933-12745051)
chr3 (49-186)||(41349671-41349809)
chr3 (52-186)||(51617342-51617476)
chr3 (52-186)||(52168294-52168428)
chr3 (68-188)||(22153070-22153190)
chr3 (63-195)||(32758972-32759104)
chr3 (52-168)||(38455160-38455276)
chr3 (52-116)||(50260928-50260992)
chr3 (129-193)||(53711865-53711929)
chr3 (135-186)||(17552488-17552539)
chr3 (98-156)||(3020655-3020713)
chr3 (135-193)||(22173799-22173857)
chr3 (103-168)||(46739353-46739418)
chr3 (63-116)||(52931647-52931700)
chr3 (135-184)||(52931751-52931800)
chr3 (99-156)||(54726096-54726153)
chr3 (123-155)||(9492718-9492750)
chr3 (52-116)||(29512212-29512276)
chr3 (99-167)||(39289591-39289659)
[»] chr8 (35 HSPs)
chr8 (52-186)||(9056016-9056150)
chr8 (63-186)||(14381249-14381372)
chr8 (52-186)||(40098755-40098889)
chr8 (52-193)||(37716078-37716219)
chr8 (51-186)||(26014580-26014714)
chr8 (63-169)||(13228876-13228982)
chr8 (64-183)||(7377568-7377688)
chr8 (64-190)||(9808381-9808505)
chr8 (63-190)||(13211246-13211373)
chr8 (93-166)||(29451763-29451836)
chr8 (52-168)||(15285648-15285764)
chr8 (52-168)||(15466017-15466133)
chr8 (51-185)||(9056033-9056167)
chr8 (96-186)||(11692059-11692148)
chr8 (52-186)||(14381233-14381367)
chr8 (63-186)||(26014575-26014697)
chr8 (50-128)||(1739634-1739712)
chr8 (51-143)||(10117024-10117116)
chr8 (52-186)||(40098771-40098905)
chr8 (52-116)||(7377549-7377613)
chr8 (99-193)||(15232311-15232405)
chr8 (107-165)||(29360798-29360856)
chr8 (63-131)||(2810089-2810157)
chr8 (135-190)||(13211317-13211372)
chr8 (135-190)||(15285660-15285715)
chr8 (135-190)||(15466029-15466084)
chr8 (78-165)||(18603490-18603577)
chr8 (107-197)||(2296524-2296614)
chr8 (56-190)||(6197833-6197967)
chr8 (62-116)||(9808453-9808507)
chr8 (79-185)||(32016796-32016901)
chr8 (54-116)||(33574868-33574930)
chr8 (50-183)||(11295678-11295811)
chr8 (123-183)||(2805879-2805939)
chr8 (68-112)||(37716085-37716129)
[»] chr2 (25 HSPs)
chr2 (52-195)||(43426630-43426773)
chr2 (63-186)||(5574116-5574239)
chr2 (63-186)||(34248426-34248549)
chr2 (64-186)||(3714224-3714345)
chr2 (63-186)||(1980996-1981118)
chr2 (52-192)||(3887838-3887978)
chr2 (66-186)||(30902282-30902402)
chr2 (63-169)||(6566943-6567049)
chr2 (63-166)||(22373616-22373719)
chr2 (52-186)||(38594355-38594489)
chr2 (52-186)||(38597951-38598085)
chr2 (63-195)||(25278180-25278312)
chr2 (83-186)||(20504254-20504357)
chr2 (62-186)||(34248420-34248544)
chr2 (52-149)||(38618146-38618243)
chr2 (63-118)||(6566921-6566976)
chr2 (63-118)||(20504249-20504304)
chr2 (63-186)||(30902284-30902407)
chr2 (52-186)||(5574121-5574255)
chr2 (99-168)||(10041584-10041653)
chr2 (99-156)||(41823783-41823840)
chr2 (64-143)||(7837092-7837171)
chr2 (103-168)||(17843997-17844062)
chr2 (103-199)||(15859549-15859645)
chr2 (99-167)||(41823771-41823839)
[»] chr6 (23 HSPs)
chr6 (52-186)||(17268024-17268158)
chr6 (46-190)||(21506452-21506596)
chr6 (52-186)||(17773512-17773646)
chr6 (63-193)||(21998043-21998173)
chr6 (51-186)||(30397736-30397870)
chr6 (52-186)||(30460608-30460742)
chr6 (49-186)||(31536322-31536461)
chr6 (52-186)||(21506474-21506608)
chr6 (68-186)||(28577612-28577730)
chr6 (53-186)||(30460624-30460757)
chr6 (63-186)||(17773507-17773630)
chr6 (64-185)||(21998046-21998167)
chr6 (63-187)||(28577607-28577731)
chr6 (52-186)||(30397720-30397853)
chr6 (79-168)||(15467602-15467691)
chr6 (52-116)||(31536306-31536370)
chr6 (135-186)||(17268091-17268142)
chr6 (59-193)||(10258306-10258440)
chr6 (79-185)||(12349837-12349942)
chr6 (122-183)||(14093095-14093156)
chr6 (83-147)||(3673822-3673886)
chr6 (59-183)||(28554949-28555073)
chr6 (133-185)||(28737840-28737891)
[»] chr7 (35 HSPs)
chr7 (52-176)||(38238805-38238929)
chr7 (63-193)||(29498787-29498917)
chr7 (64-188)||(22281450-22281574)
chr7 (63-186)||(25079218-25079341)
chr7 (64-186)||(22106678-22106800)
chr7 (52-186)||(40416901-40417035)
chr7 (64-186)||(40529551-40529673)
chr7 (50-186)||(1706826-1706962)
chr7 (63-186)||(34703449-34703572)
chr7 (68-186)||(24936544-24936662)
chr7 (63-186)||(18234353-18234479)
chr7 (64-166)||(27554528-27554630)
chr7 (63-190)||(46943950-46944070)
chr7 (88-166)||(716265-716343)
chr7 (105-186)||(4406428-4406509)
chr7 (52-119)||(34703521-34703588)
chr7 (60-186)||(21387587-21387713)
chr7 (68-190)||(29498794-29498916)
chr7 (93-195)||(45000637-45000739)
chr7 (63-119)||(40416984-40417040)
chr7 (52-186)||(38238778-38238913)
chr7 (52-186)||(1706844-1706978)
chr7 (63-193)||(27554503-27554633)
chr7 (66-116)||(24936614-24936664)
chr7 (63-116)||(4406423-4406476)
chr7 (63-192)||(22106673-22106802)
chr7 (63-192)||(40529549-40529678)
chr7 (88-147)||(18654596-18654655)
chr7 (63-186)||(25079213-25079336)
chr7 (103-185)||(22332343-22332424)
chr7 (52-165)||(15051078-15051191)
chr7 (123-156)||(26385691-26385724)
chr7 (64-120)||(26477238-26477294)
chr7 (64-120)||(26553678-26553734)
chr7 (59-119)||(37491351-37491411)
[»] scaffold0024 (2 HSPs)
scaffold0024 (52-186)||(120156-120290)
scaffold0024 (52-186)||(120140-120274)
[»] chr4 (32 HSPs)
chr4 (52-186)||(52817562-52817696)
chr4 (52-186)||(13689531-13689665)
chr4 (52-186)||(24941122-24941256)
chr4 (63-193)||(5418521-5418651)
chr4 (66-151)||(10031567-10031652)
chr4 (118-186)||(5281196-5281264)
chr4 (52-159)||(38539473-38539580)
chr4 (49-183)||(29006827-29006961)
chr4 (52-114)||(44156083-44156145)
chr4 (63-116)||(24941117-24941170)
chr4 (52-116)||(3504072-3504136)
chr4 (52-116)||(5281216-5281280)
chr4 (52-116)||(52817648-52817712)
chr4 (66-129)||(29223951-29224014)
chr4 (98-185)||(42013159-42013245)
chr4 (47-156)||(4406231-4406340)
chr4 (51-116)||(5418596-5418661)
chr4 (52-165)||(20598252-20598365)
chr4 (57-165)||(19878286-19878394)
chr4 (118-186)||(44156061-44156129)
chr4 (122-186)||(55087776-55087840)
chr4 (98-165)||(4708577-4708644)
chr4 (136-198)||(8311316-8311378)
chr4 (98-156)||(40881468-40881526)
chr4 (50-116)||(55087792-55087858)
chr4 (123-156)||(2404653-2404686)
chr4 (52-101)||(9993540-9993589)
chr4 (63-116)||(13689617-13689670)
chr4 (103-168)||(13743887-13743952)
chr4 (123-176)||(22720527-22720580)
chr4 (131-183)||(19934652-19934704)
chr4 (131-183)||(54164827-54164879)
[»] scaffold0536 (2 HSPs)
scaffold0536 (63-186)||(3961-4084)
scaffold0536 (51-116)||(3944-4009)
[»] scaffold0039 (2 HSPs)
scaffold0039 (52-193)||(54383-54524)
scaffold0039 (52-186)||(54399-54533)
[»] scaffold0027 (1 HSPs)
scaffold0027 (52-193)||(17162-17303)
[»] scaffold0007 (2 HSPs)
scaffold0007 (63-186)||(246806-246929)
scaffold0007 (63-190)||(246801-246928)
[»] scaffold0047 (2 HSPs)
scaffold0047 (52-186)||(61158-61291)
scaffold0047 (52-186)||(61174-61307)
[»] scaffold0635 (1 HSPs)
scaffold0635 (99-168)||(5417-5486)
[»] scaffold1137 (1 HSPs)
scaffold1137 (107-155)||(1112-1160)


Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34658330 - 34658568
Alignment:
Q  1 ttttgtttatatttaataaattatagttattgtattcnnnnnnngattaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatat 100  Q
    |||||||||||||||||||||||||||||||||||||       |||||| |||||||||| ||||||||||||| ||||||||||||||||||||| ||    
T  34658330 ttttgtttatatttaataaattatagttattgtattctttttttgattaattacaccatccggtcactaatataagcaaaaattcacttttcagatacat 34658429  T
Q  101 ttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcgaaaggtt 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||||||| ||||| |||| ||||    
T  34658430 ttaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgtatttaaaaaatagaattttgcttatatcaatgaccgaagggtt 34658529  T
Q  201 ttccatctatgataaagaaataagaccgtacctcctttg 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34658530 ttccatctatgataaagaaataagaccgtacctcctttg 34658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 37734779 - 37734902
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||    
T  37734779 gtcactaatataagcaaaaattcacttttaagatacattcaattaatgatgtatgtgacatataataaagaccgcatacatcattaattgaatgtatcta 37734878  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||||| |||| |||||||||    
T  37734879 aaaagtggatttttgcttatatta 37734902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 639944 - 639810
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  639944 tacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaatt 639845  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  639844 gaatgtatctaaaaagtggatttttgcttatatta 639810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 33603986 - 33604120
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  33603986 tacaccctccggtcactaatataaacaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaatt 33604085  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  33604086 gaatgtatctaaaaagtggatttttgcttatatta 33604120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 48022740 - 48022606
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  48022740 tacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaatt 48022641  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  48022640 gaatgtatctaaaaagtggatttttgcttatatta 48022606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 40262474 - 40262595
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| || |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||     
T  40262474 gtcactaatataaacaaaaatccagtttttagatatattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattaaatgtattt- 40262572  T
Q  163 aaaagtggaattttacttatatta 186  Q
     |||||||| |||| |||||||||    
T  40262573 -aaagtggatttttgcttatatta 40262595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 3384213 - 3384352
Alignment:
Q  47 ttaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattat 146  Q
    ||||||||||| ||| |||| |||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| ||    
T  3384213 ttaagtacaccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcat 3384312  T
Q  147 taattaaatgtatttaaaaagtggaattttacttatatta 186  Q
     |||| ||||||| ||||||||| | ||||| ||||||||    
T  3384313 caattgaatgtatctaaaaagtgaatttttatttatatta 3384352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 8257937 - 8258072
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||| ||||||| ||||||||||||||| ||||| ||| ||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  8257937 gtacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaat 8258036  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||||||| ||||||||| | |||| |||||||||    
T  8258037 tgaatgtatctaaaaagtgaatttttgcttatatta 8258072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 31008404 - 31008270
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| |||||||| ||||||| ||||||| ||||| ||| |||||||||||||| | |||||||||||||||||||||||| |||||||    
T  31008404 tacaccctccggtcattaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaatt 31008305  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||| |||||||| || |||| |||||||||    
T  31008304 aaatgtatctaaaaagtagatttttgcttatatta 31008270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 4060317 - 4060182
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||||||||||| |||||||  |||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||| |||||||||    
T  4060317 gtacaccctccggtcactaatataagcaaaaatctactttttagatacatttaactaatgatgtatttgagatataataaagaccacatatattattaat 4060218  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||| ||| ||||||||||| |||| |||||||||    
T  4060217 tgaatatatctaaaaagtggatttttgcttatatta 4060182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 5856370 - 5856493
Alignment:
Q  66 actaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    |||||||||| |||||||||| |||| ||||    | |||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  5856370 actaatataaacaaaaattcattttttagat----tcaattaatgatgtacgtgacatataataaagaccacatacataattaattgaatgtatttaaaa 5856465  T
Q  166 agtggaattttacttatattaatgatcg 193  Q
    |||||| |||| ||||||||| ||||||    
T  5856466 agtggatttttgcttatattagtgatcg 5856493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 15439868 - 15439993
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  | |||  ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  15439868 gtcactaatataaacaaaaatctattttgtagatacattcaattaatgatatatgtgacatataataaagaccacatacattattaattgaatgtattta 15439967  T
Q  163 aaaagtggaattttacttatattaat 188  Q
    ||||||  | |||| |||||||||||    
T  15439968 aaaagtcaatttttgcttatattaat 15439993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 6065456 - 6065590
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||| |  |||||| ||||| ||| ||||||||||| || ||||||||||||| |||||||||||| |||||||    
T  6065456 tacaccctccggtcactaatataagcaaaattctactttttagatacattcaattaatgatggatgtgacatataataaggaccacatacatcattaatt 6065555  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||| |||||| |||| |||||||||    
T  6065556 gaatgtatctaaagagtggatttttgcttatatta 6065590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 27206904 - 27206770
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  ||| || ||||| ||| ||||||||||||||  |||||||||||||||| |||||||| |||||||    
T  27206904 tacaccctccggtcactaatataagcaaaaatcaactatttagatacattcaattaatgatgtatgcgacatataataaagactacatacatcattaatt 27206805  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||  |||| |||||||||    
T  27206804 gaatgtatctaaaaagtggttttttgcttatatta 27206770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 4602650 - 4602773
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||| | ||||||| ||||| ||| |||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||| ||    
T  4602650 gtcactaatataaacaaaattccactttttagatacattcaattaatgatatatgtgacatataataaataccacatatatcattaattgaatgtatcta 4602749  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||| || | ||||||||||||||    
T  4602750 aaaaatgaatttttacttatatta 4602773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 14418202 - 14418104
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    |||||| ||| |||| |||||||| ||||||||||||||| ||||| ||| || ||||||||||| |||||||||||||||||||||||||| ||||||    
T  14418202 tacaccctccggtcattaatataagcaaaaattcactttttagatacattcaactaatgatgtatgtgacatataataaagaccacatacatcattaat 14418104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 2349762 - 2349895
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtat-tt 161  Q
    ||||||||||||| ||||||| || |||| ||||| ||| ||||||||||| || ||||||||||||||||| |||||||| ||||||| ||||||| |     
T  2349762 gtcactaatataaacaaaaatccattttttagatacattcaattaatgatgcatgtgacatataataaagactacatacatcattaattgaatgtatcta 2349861  T
Q  162 aaaaagtggaattttacttatattaatgatcgaa 195  Q
    ||||| | || |||||||||||||| ||| ||||    
T  2349862 aaaaaatagatttttacttatattagtgaccgaa 2349895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 2352916 - 2353037
Alignment:
Q  78 aaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaatttta 177  Q
    |||||| ||||||| ||||| ||| ||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| |||||| |  | ||||     
T  2352916 aaaaatccactttttagatacattcaattaatgacgtatttgacatataataaagagcacatacatcattaattaaatgtatctaaaaaataaatttttg 2353015  T
Q  178 cttatattaatgatcgaaaggt 199  Q
    ||||||||| |||||| |||||    
T  2353016 cttatattagtgatcggaaggt 2353037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 8258088 - 8257955
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| ||   | || || |   |||||||||||||||||    
T  8258088 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaatt 8257989  T
Q  152 aaatgtatttaaaaagtggaattttacttatatt 185  Q
     ||||||| ||||||||| | |||| ||||||||    
T  8257988 gaatgtatctaaaaagtgaatttttgcttatatt 8257955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 35367623 - 35367524
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||| ||||| ||||||| || |||| ||||| ||| |||||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  35367623 tacaccctccggtcactactataagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatattataaagaccacatgcatcattaatt 35367524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 31008254 - 31008392
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| |||||||||||||||||| ||   | || || |    |||||||| |||||||    
T  31008254 tacaccctccggtcactaatataagcaaaaatctactttttagatacatttaattaatgatgtatgtggtctttattatatgttacatacatcattaatt 31008353  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatga 190  Q
     ||||||| ||||||||||| |||| |||||||||||||    
T  31008354 gaatgtatctaaaaagtggatttttgcttatattaatga 31008392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 3384357 - 3384230
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||||||||||||  |||||||||||||| ||||| ||| |||| ||||||||| |||  | || || |   ||||||||| ||||||| ||||||| ||    
T  3384357 gtcactaatataaataaaaattcactttttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatcta 3384258  T
Q  163 aaaagtggaattttacttatattaatga 190  Q
    ||||||| | |||| |||||||||||||    
T  3384257 aaaagtgaatttttgcttatattaatga 3384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 17490559 - 17490499
Alignment:
Q  126 aataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||| |||||||||    
T  17490559 aataaagaccacatatatcattaattaaatgtatctaaaaagtggatttttgcttatatta 17490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 37734924 - 37734854
Alignment:
Q  46 attaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||| |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  37734924 attaaatacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 37734854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 38468832 - 38468718
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||||||| ||||| |||||||  |||||||||  ||| ||||| ||||||| |||||||||| |    || |||||||||||||||||||||| ||    
T  38468832 gtacaccatccggtcacaaatataagaaaaaattcatattttagatacatttaataaatgatgtatgttgtctacaataaagaccacatacattatttat 38468733  T
Q  151 taaatgtatttaaaa 165  Q
    | |||| || |||||    
T  38468732 tgaatgaatctaaaa 38468718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 639793 - 639858
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  639793 gtacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 639858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23944032 - 23944096
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| |||||||||| |||| ||||| ||| ||||||||||||||    
T  23944032 tacaccctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgtat 23944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 26344316 - 26344252
Alignment:
Q  101 ttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    |||||||||||||||||||   |||||||||||| | ||||||||||||||||||  ||||||||    
T  26344316 ttaattaatgatgtatatgttctataataaagactatatacattattaattaaataaatttaaaa 26344252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 33604136 - 33604072
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  33604136 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 33604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 48022590 - 48022654
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  48022590 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 48022654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 6065606 - 6065472
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| |||| || ||||| ||| |||||||||||||| ||     || || |   ||||| ||| |||||||    
T  6065606 tacaccctccggtcactaatataagcaaaaatccactctttagatacattcaattaatgatgtatgtggtccttattatatgtcacatccatcattaatt 6065507  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||||||| ||||||| |||||||||    
T  6065506 gaatgtatctaaaaagtagaattttgcttatatta 6065472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 1358237 - 1358185
Alignment:
Q  132 gaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatt 185  Q
    |||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  1358237 gaccacatacatcattaattaaatgtacttaaaaagt-caattttacttatatt 1358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 17490494 - 17490543
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgat 112  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  17490494 gtcactaatataagcaaaaatccactttttagatacatttaattaatgat 17490543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 2353028 - 2352976
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||||||||| |||||||| | |||| ||||| ||||||||||||||||||    
T  2353028 tcactaatataagcaaaaatttattttttagatacatttaattaatgatgtat 2352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 21321379 - 21321427
Alignment:
Q  118 tgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    ||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  21321379 tgacatataataaagaccatatacatcattaattaaatatatctaaaaa 21321427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 21321452 - 21321396
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatg 119  Q
    |||||||||||||  ||||||  | |||| |||||||||||||||||||||||||||    
T  21321452 gtcactaatataaataaaaatatattttttagatatatttaattaatgatgtatatg 21321396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 1036035 - 1035972
Alignment:
Q  49 aagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgat 112  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||  ||||  ||| ||||||||||    
T  1036035 aagtacaccctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgat 1035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 4060177 - 4060300
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||||||| ||||||| || ||| ||   | || || |   || |||||| |||| |||||||||| ||    
T  4060177 gtcactaatataagcaaaaatccactttttagatatattcaattaataatatatgtggtctttattatatctcaaatacatcattagttaaatgtatcta 4060276  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || |||| |||||||||    
T  4060277 aaaagtagatttttgcttatatta 4060300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 5595467 - 5595546
Alignment:
Q  104 attaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    |||||| |||||| ||| ||||||||||||||| ||| |||| ||||| |||| || ||||| || || |||||||||||    
T  5595467 attaataatgtatgtgatatataataaagaccatatatattactaattgaatgaatctaaaatgtagatttttacttata 5595546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 8466024 - 8465958
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    ||||| |||||||||||| ||   ||||||||||||||||||||| ||||| |||||| || |||||    
T  8466024 atttatttaatgatgtatgtggtctataataaagaccacatacatcattaaataaatgaatctaaaa 8465958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 11324499 - 11324569
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    |||||||||||||| |||||| ||||||| |||| |||||||| ||  | ||||| |||||||| ||||||    
T  11324499 tataataaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatcg 11324569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 11482520 - 11482590
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    |||||||||||||| |||||| ||||||| |||| |||||||| ||  | ||||| |||||||| ||||||    
T  11482520 tataataaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatcg 11482590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 50550209 - 50550123
Alignment:
Q  107 aatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    |||||||||| |||  ||||||||||| || |||||||||||||| |||| ||||| || || || ||||| ||||| || ||||||    
T  50550209 aatgatgtatgtgatctataataaagatcatatacattattaattgaatgaatttataatgttgatttttatttataatagtgatcg 50550123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 39515099 - 39515066
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagat 96  Q
    ||||||||||||| ||||||||||||||||||||    
T  39515099 gtcactaatataagcaaaaattcacttttcagat 39515066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 40262611 - 40262549
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| ||||||| ||||||  | ||| ||||||||||||||||||    
T  40262611 tacaccctccggtcactaatataagcaaaaatccacttt--aaatacatttaattaatgatgtat 40262549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 5856502 - 5856438
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||  |||||||||||| ||||||| ||||||| | ||| ||| ||||||| ||||||    
T  5856502 tacaccatccgatcactaatataagcaaaaatccactttttaaatacattcaattaattatgtat 5856438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 13877035 - 13877111
Alignment:
Q  107 aatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    |||||||||||||| |||||||||||| || |||||||||  ||| |||  || ||||| ||  |||||||||||||    
T  13877035 aatgatgtatatgatatataataaagatcatatacattatagattgaataaatctaaaatgtaaaattttacttata 13877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 21444278 - 21444210
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgat 191  Q
    |||||||||||||||||| |||||| |||||||| || |||||  || | |||| |||||||| |||||    
T  21444278 tataataaagaccacatatattatttattaaatgaatctaaaatatgtatttttgcttatatttatgat 21444210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 27206754 - 27206818
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| | ||||||||||| ||||||  ||||||| ||||| ||| ||||||||||||||    
T  27206754 tacaccctccggccactaatataagcaaaaaaccactttttagatacattcaattaatgatgtat 27206818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 193
Target Start/End: Complemental strand, 3851508 - 3851367
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  3851508 tacaccctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 3851409  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
     ||||||| ||||||||||| |||| ||||||||| ||||||    
T  3851408 gaatgtatctaaaaagtggatttttgcttatattagtgatcg 3851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 19531296 - 19531437
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||| ||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  19531296 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 19531395  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
     ||||||| ||||||||| | |||| ||||||||| ||||||    
T  19531396 gaatgtatctaaaaagtgaatttttgcttatattagtgatcg 19531437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 15712127 - 15712257
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| ||||||| || |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  15712127 gtcattaatataagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtattta 15712226  T
Q  163 aaaagtggaattttacttatattaatgatcg 193  Q
    |||||| || |||| ||||||||||||||||    
T  15712227 aaaagttgatttttgcttatattaatgatcg 15712257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 23914986 - 23914852
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  23914986 tacaccctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaatt 23914887  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  23914886 gaatgtatctaaaaagtggatttttgcttatatta 23914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 42013956 - 42013833
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||| ||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||    
T  42013956 gtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatcta 42013857  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  42013856 aaaagtgaatttttgcttatatta 42013833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 38835520 - 38835637
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||| || |||||||||||| |||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||  |||||| |||||||    
T  38835520 tacaccattcaatcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccgtatacatcattaatt 38835619  T
Q  152 aaatgtatttaaaaagtg 169  Q
     |||||||||||||||||    
T  38835620 gaatgtatttaaaaagtg 38835637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 11262462 - 11262339
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||||| |||  ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||    
T  11262462 gtcactaatataagcaaaaattcattttgtagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatcta 11262363  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  11262362 aaaagtgaatttttgcttatatta 11262339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 26300256 - 26300122
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||||||||||||  |||| || |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26300256 tacaccctccggtcactaatataagtaaaattttactttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcattaatt 26300157  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||  | |||| |||||||||    
T  26300156 gaatgtatctaaaaagtaaatttttgcttatatta 26300122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 37944736 - 37944613
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||| | |||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||| ||    
T  37944736 gtcactaatataagcaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaatgtatcta 37944637  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  37944636 aaaagtgaatttttgcttatatta 37944613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 13157466 - 13157340
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| | | | ||| |||||||||||||| ||| ||||||||||||||| |||||| ||||||| ||| ||| ||    
T  13157466 gtcactaatataagcaaaaattcactttttaaa-acattcaattaatgatgtatgtgatatataataaagaccatatacatcattaattgaatatatcta 13157368  T
Q  163 aaaagtggaattttacttatattaatga 190  Q
    ||||||||| |||| |||||||||||||    
T  13157367 aaaagtggatttttgcttatattaatga 13157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 35969134 - 35969265
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaa-ttaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattt 161  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| || |||||||||||| || |||||||||||||| |||||||  ||||||| ||||||| |    
T  35969134 gtcactaatataagcaaaaatccactttttagatacattcaaattaatgatgtatgtggcatataataaagactacatacaccattaattgaatgtatct 35969233  T
Q  162 aaaaagtggaattttacttatattaatgatcg 193  Q
    |||||||| | |||||||||||||| ||||||    
T  35969234 aaaaagtgaatttttacttatattagtgatcg 35969265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 43446854 - 43446951
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa 149  Q
    |||||| ||| || |||||||||| |||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  43446854 tacaccctccggttactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaa 43446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 8961353 - 8961230
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| |||||||  ||| || | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||    
T  8961353 gtcattaatataaacaaaaatctactgtttaaatacattcaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgtatcta 8961254  T
Q  163 aaaagtggaattttacttatatta 186  Q
    || |||| | |||| |||||||||    
T  8961253 aagagtgaatttttgcttatatta 8961230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 37870151 - 37870020
Alignment:
Q  63 gtcactaatataaccaaaaat-tcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattt 161  Q
    ||||||||||||| ||||||| ||| |||| ||||||||| ||||||||||| || ||||||||||||||||| | ||||| |||||||| ||||||| |    
T  37870151 gtcactaatataagcaaaaatctcattttt-agatatattcaattaatgatgaatgtgacatataataaagactatatacaatattaattgaatgtatct 37870053  T
Q  162 aaaaagtggaattttacttatattaatgatcga 194  Q
    ||||| |||  |||| ||||||||| |||||||    
T  37870052 aaaaaatggttttttgcttatattagtgatcga 37870020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 21945416 - 21945522
Alignment:
Q  93 agatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatc 192  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| |||||| ||||||| ||| |||  |||||||| | ||||| |||||||||||| |    
T  21945416 agataaattcaattaatgatgtatgtgacatataataaagaccagatacatcattaattgaatatatcaaaaaagtgaatttttatttatattaatgacc 21945515  T
Q  193 gaaaggt 199  Q
    | |||||    
T  21945516 ggaaggt 21945522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 13311308 - 13311186
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||||||||||||  ||||||  |  ||| ||||| ||| |||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||| |     
T  13311308 gtcactaatataagtaaaaatctatcttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaattgaatgtatct- 13311210  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || |||| |||||||||    
T  13311209 aaaagtagacttttgcttatatta 13311186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 13157339 - 13157461
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| ||||||| ||||||| ||||||||| |||||||||||||||||   | || || | | ||||||||| ||||||| ||||| ||||    
T  13157339 gtcattaatataagcaaaaatccactttttagatatattcaattaatgatgtatatggtctttattatatatcacatacatcattaattgaatgt-ttta 13157437  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  13157438 aaaagtgaatttttgcttatatta 13157461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 8961214 - 8961352
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||||||||||||||||| |||||||||||| || ||||| ||| ||||||| |||||| ||   | || || |   ||||||||| |||||||    
T  8961214 tacaccctccagtcactaatataagcaaaaattcactctttagatacattcaattaataatgtatgtggtctttattatatgtcacatacatcattaatt 8961313  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatga 190  Q
     |||||||||||| ||| || ||||  ||||||||||||    
T  8961314 gaatgtatttaaacagtagatttttgtttatattaatga 8961352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 26300106 - 26300240
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| ||   | || || |   || |||||| |||||||    
T  26300106 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcattaatt 26300205  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||  ||||||||||||||||    
T  26300206 gaatgtatctaaaaagtaaaattttacttatatta 26300240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 42013828 - 42013950
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| ||   | || || |   ||||||||| ||||||| ||||||| ||    
T  42013828 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatcta 42013927  T
Q  163 aaaagtggaattttacttatatt 185  Q
    ||||||| | |||| ||||||||    
T  42013928 aaaagtgaatttttgcttatatt 42013950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 19531434 - 19531313
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| ||   | || || |   ||||||||| ||||||| ||||||| |||    
T  19531434 tcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaa 19531335  T
Q  164 aaagtggaattttacttatatt 185  Q
    |||||| | |||| ||||||||    
T  19531334 aaagtgaatttttgcttatatt 19531313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 37944608 - 37944740
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||  | || || |   ||||||||| ||||||| ||||||| ||    
T  37944608 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatcta 37944707  T
Q  163 aaaagtggaattttacttatattaatgatcgaa 195  Q
    |||| |  | |||| ||||||||| ||| ||||    
T  37944708 aaaaataaatttttgcttatattagtgaccgaa 37944740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 3851370 - 3851492
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| ||   | || || |   ||||||||| ||||||||||||||| |||    
T  3851370 tcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattaaatgtatctaa 3851469  T
Q  164 aaagtggaattttacttatatta 186  Q
    ||| || | |||| |||||||||    
T  3851470 aaaatgaatttttgcttatatta 3851492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 38835677 - 38835531
Alignment:
Q  46 attaagtacaccatccagtcactaatataaccaaaaa-ttcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacatt 144  Q
    |||||||||||| ||  ||||||||||||| |||||| ||||||||| | ||| ||| ||||||||||||||| |   | || || |   |||||||||     
T  38835677 attaagtacaccctctggtcactaatataagcaaaaaattcactttttaaatacattcaattaatgatgtatacggtctttattatatgtcacatacatc 38835578  T
Q  145 attaattaaatgtatttaaaaagtggaattttacttatattaatgat 191  Q
    ||||||||||||||| |||||| || | |||| ||||||||| ||||    
T  38835577 attaattaaatgtatctaaaaaatgaatttttgcttatattagtgat 38835531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 11262334 - 11262387
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  11262334 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtat 11262387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 35172476 - 35172529
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  35172476 aattaatgatgtatgtgacctataatatagaccacatacattattaattgaatg 35172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23914836 - 23914900
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  23914836 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 23914900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 12165378 - 12165313
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    ||||||||||||||||||  |||| || | ||||||||||| |||||||||||| || ||||||||    
T  12165378 aattaatgatgtatatgatttatattatataccacatacatcattaattaaatgaatctaaaaagt 12165313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 21945525 - 21945461
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| |||| ||||||||  ||||||||||||||  |||||||| ||||||||||||||    
T  21945525 tacaccttccggtcattaatataaataaaaattcacttttttgatatattcaattaatgatgtat 21945461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 14416504 - 14416437
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    |||||||||||||||||| |||  |||||||  |||||||||||| ||||||| |||| || ||||||    
T  14416504 atttaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaatctaaaaa 14416437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 15712183 - 15712128
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    ||||||||| ||||||| ||||||| |||||| |||| |||| |||||||||||||    
T  15712183 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatattaatga 15712128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 31706040 - 31706095
Alignment:
Q  138 atacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    ||||||||||||||||||| |||||||| ||  | ||||||||||| |||||||||    
T  31706040 atacattattaattaaatgaatttaaaatgtaaatttttacttataataatgatcg 31706095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 35969262 - 35969139
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa-ttaaatgtattta 162  Q
    ||||||||||||  |||||||||||||| ||||| ||| |||||||| ||||| |    | || || |  |||||||||| ||||| || ||||||| ||    
T  35969262 tcactaatataagtaaaaattcactttttagatacattcaattaatggtgtatgtagtctttattatatgccacatacatcattaatttgaatgtatcta 35969163  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||||| |||| |||||||||    
T  35969162 aaaagtggatttttgcttatatta 35969139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 12750113 - 12750226
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||| ||||||| |||||||| |  ||| ||||| ||| ||| ||||||||||||    || |||||||  ||||||||||||| |||    
T  12750113 tacaccctccggtcacaaatataaacaaaaatttatgttttagatacattcaataaatgatgtatattgtctacaataaaggtcacatacattatttatt 12750212  T
Q  152 aaatgtatttaaaa 165  Q
     |||| ||||||||    
T  12750213 gaatgaatttaaaa 12750226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 35969115 - 35969070
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    ||||||| ||||||||||||| |||||||||||| || ||||||||    
T  35969115 tataatatagaccacatacatcattaattaaatgaatctaaaaagt 35969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 42364294 - 42364249
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||| |||||||||| | ||| ||||||||||||||||    
T  42364294 tataataaagactacatacattaattattcaatgtatttaaaaagt 42364249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 14064937 - 14064823
Alignment:
Q  69 aatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    ||||||| |||||||| |||||| ||||  ||| |||||||||||||| |||   ||||||  |||||||||||| ||||||| |||| |  ||||||||    
T  14064937 aatataagcaaaaatt-actttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaacctaaaaagt 14064839  T
Q  169 ggaattttacttatatt 185  Q
      || ||||||||||||    
T  14064838 -aaaatttacttatatt 14064823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 38455310 - 38455172
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  38455310 tacaccctccggtcactaatataaacaaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaaat 38455211  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatga 190  Q
     ||||||| ||||||||||| |||| |||||||||||||    
T  38455210 taatgtatctaaaaagtggatttttgcttatattaatga 38455172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 51617326 - 51617460
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||  |||||||    
T  51617326 tacaccctccggtcactaatataaccaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacaacattaatt 51617425  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||||||||||||||| |||||||||    
T  51617426 gaatgtatctaaaaagtggaattttgcttatatta 51617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 52168277 - 52168416
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||||||||||| |||||||| |||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  52168277 gtacaccctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtggcatataataaagaccacatacatcattaaa 52168376  T
Q  151 taaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    | ||||||| ||||||||||| |||| ||||| |||||||    
T  52168377 ttaatgtatctaaaaagtggatttttgcttatgttaatga 52168416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 29565103 - 29565242
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||||||||||| |||||||  | |||| ||||| |||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  29565103 gtacaccctccggtcactaatataagcaaaaatcaattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatatatcattaat 29565202  T
Q  151 taaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    | ||||||| ||||||||| | |||| |||||||||||||    
T  29565203 tgaatgtatgtaaaaagtgaatttttgcttatattaatga 29565242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 29720071 - 29720205
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||  ||| ||||| |||| ||| |||||||||||||||||||||||||| |||||||    
T  29720071 tacaccctccggtcactaatataatcaaaaatccactttttagatgcattcaattattgatatatgtgacatataataaagaccacatacatcattaatt 29720170  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||||||||||||| | |||| |||||||||    
T  29720171 aaatgtatttaaaaagtgaatttttgcttatatta 29720205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 17552472 - 17552596
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| | ||| ||| ||||||| |||||| ||||||||||||||||||||||||||  ||||||    
T  17552472 tacaccctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaataatgtatgtgacatataataaagaccacatacatcgttaatt 17552571  T
Q  152 aaatgtatttaaaaagtggaatttt 176  Q
     ||||||||||||||||||| ||||    
T  17552572 gaatgtatttaaaaagtggattttt 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 41349655 - 41349790
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||||||||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  41349655 tacaccctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 41349754  T
Q  152 aaatgtat-ttaaaaagtggaattttacttatatta 186  Q
     ||||||| | ||||| |||| |||| |||||||||    
T  41349755 gaatgtatctaaaaaaatggatttttgcttatatta 41349790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 50261079 - 50260944
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaa-ttcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    |||||| ||| ||||||||||||| |||||| ||||||||| ||||| ||| | |||| ||||||| |||||||||||||||||||||||||| ||||||    
T  50261079 tacaccctccggtcactaatataagcaaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaat 50260980  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||||||| ||||||||||| |||| |||||||||    
T  50260979 tgaatgtatctaaaaagtggatttttgcttatatta 50260944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 52315523 - 52315401
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||| ||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||| |||    
T  52315523 tcactagtataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaa 52315424  T
Q  164 aaagtggaattttacttatatta 186  Q
    |||||||| |||| |||||||||    
T  52315423 aaagtggatttttgcttatatta 52315401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 36362738 - 36362615
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| |||||||  |||||| ||||| ||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  36362738 gtcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggaccacatacatcattaattaaatgtattta 36362639  T
Q  163 aaaagtggaattttacttatatta 186  Q
    || ||| || |||| |||||||||    
T  36362638 aagagttgatttttgcttatatta 36362615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 32759099 - 32758973
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||||||||| ||||| ||||||||||| ||| |||    
T  32759099 tcactaatataaataaaaatttactttttagatatatttaattaatgatatatgtgatatataataaagaccacgtacatcattaattaaatatatctaa 32759000  T
Q  164 aaagtggaattttacttatattaatga 190  Q
    ||| |  | ||||| ||||||||||||    
T  32758999 aaaataaatttttatttatattaatga 32758973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 42449250 - 42449116
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||||| | ||||||||||| |||||||  | |||| | ||| ||| ||||||||||| || |||||||||||||||| ||||||||| |||||||    
T  42449250 tacaccatccggccactaatataaacaaaaatatattttttaaatacattcaattaatgatgaatgtgacatataataaagatcacatacatcattaatt 42449151  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  42449150 gaatgtatctaaaaagtggatttttgcttatatta 42449116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 33412610 - 33412478
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||||||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||  || |||  ||| ||||||||| |||||||    
T  33412610 tacaccctccagtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaatt 33412511  T
Q  152 aaatgtatttaaaaagtggaattttacttatat 184  Q
     ||||||| ||||||||||| |||| |||||||    
T  33412510 gaatgtatctaaaaagtggatttttgcttatat 33412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 21403904 - 21404023
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||    
T  21403904 tcactaatataaacaaaaatctactttttagata-attcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaa 21404002  T
Q  164 aaagtggaattttacttatatta 186  Q
    ||  |||| |||| |||||||||    
T  21404003 aa--tggatttttgcttatatta 21404023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 29512162 - 29512240
Alignment:
Q  88 ttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29512162 tttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattaaatgtatctaaaaa 29512240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 51239388 - 51239254
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  | |||| ||||| ||| |||||||||||||| ||||||||||||| ||||||||| || |||| ||    
T  51239388 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagtt 51239289  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||| ||| || |||| |||||||||    
T  51239288 gaatgtatctaaagagtagatttttgcttatatta 51239254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 22153188 - 22153068
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    ||||||||  ||||||| |||||| ||||| ||||||||||| |||||||||| ||||||||||||   |||| || ||||||||||| |||||||||||    
T  22153188 taatataaataaaaatttactttttagatacatttaattaataatgtatatgatatataataaagatatcatatatcattaattaaatatatttaaaaag 22153089  T
Q  168 tggaattttacttatattaat 188  Q
    | || ||||  ||||||||||    
T  22153088 tagatttttgtttatattaat 22153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 52931750 - 52931652
Alignment:
Q  88 ttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||| | || | |||| |||||||||    
T  52931750 tttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaagaatgaatttttgcttatatta 52931652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22173806 - 22173906
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||| |||||||  || ||| ||||| ||| |||||||||||||| |||||||||||||| || |||||| ||||||||| ||||||| |||||||    
T  22173806 taatataagcaaaaatctacattttagatacattcaattaatgatgtatgtgacatataataaaaactacatactttattaattgaatgtatgtaaaaag 22173905  T
Q  168 t 168  Q
    |    
T  22173906 t 22173906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 22099779 - 22099890
Alignment:
Q  57 catccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    ||||| ||||||||| ||| |||||||  |||||| ||||| ||| ||||||| |||||| |||||||||||||| || |||||||| ||||||| ||||    
T  22099779 catccggtcactaatttaaacaaaaatctactttttagatacattcaattaataatgtatgtgacatataataaaaactacatacatcattaattgaatg 22099878  T
Q  157 tatttaaaaagt 168  Q
    ||  ||||||||    
T  22099879 tacgtaaaaagt 22099890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 37492387 - 37492509
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||| |||||||  ||||||| | |||| ||||| ||| |||||| |||||||||||||||||||||||||  |||| || ||||||||||  ||||||    
T  37492387 gtcacaaatataaataaaaatttattttttagatacattcaattaacgatgtatatgacatataataaagacggcatatatcattaattaaaaatattta 37492486  T
Q  163 aaaagtggaattttacttatatt 185  Q
    |||| |||| ||||  |||||||    
T  37492487 aaaaatggatttttgtttatatt 37492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 33412478 - 33412594
Alignment:
Q  70 atataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtg 169  Q
    |||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||  || | |  ||| ||||||||| ||||||| ||||||| |||||||||    
T  33412478 atataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaattgaatgtatctaaaaagtg 33412577  T
Q  170 gaattttacttatatta 186  Q
    || |||| |||||||||    
T  33412578 gatttttgcttatatta 33412594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 52315400 - 52315526
Alignment:
Q  67 ctaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    ||||||||| ||||||| ||||||| ||||||||| |||||||||||||| ||   | || || |   ||||||||| ||||||| ||||||| ||||||    
T  52315400 ctaatataagcaaaaatccactttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaa 52315499  T
Q  167 gtggaattttacttatattaatgatcg 193  Q
    ||||| |||| |||||| || ||||||    
T  52315500 gtggatttttgcttatactagtgatcg 52315526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 18939970 - 18940077
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataata------aagaccacatacattattaattaaatgt 157  Q
    ||||||||||||  ||||||||| |||| | ||| |||||||||||||||||| ||| ||||||||      |||||||||||||| ||||||| |||||    
T  18939970 tcactaatataagtaaaaattcattttttaaatacatttaattaatgatgtatgtgatatataataaaaaccaagaccacatacatcattaattgaatgt 18940069  T
Q  158 atttaaaa 165  Q
    || |||||    
T  18940070 atataaaa 18940077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 18940025 - 18939964
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcgaaa 196  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||||| |||| ||||    
T  18940025 cacatacatcattaattaaatgtatttaaaaaatgaatttttacttatattagtgattgaaa 18939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 29720210 - 29720157
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  29720210 gtcactaatataagcaaaaattcactttttaaatacatttaattaatgatgtat 29720157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 36362597 - 36362737
Alignment:
Q  50 agtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa 149  Q
    |||||||| ||| ||||||||||||| |||||||  ||| || | ||| |||||||||||||||||| ||     || || |   ||||||||| |||||    
T  36362597 agtacaccctccggtcactaatataagcaaaaatcaactctttaaatacatttaattaatgatgtatgtggtccttattatatgtcacatacatcattaa 36362696  T
Q  150 ttaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    || ||||||| |||||||| || |||| |||||||||||||    
T  36362697 ttgaatgtatctaaaaagtagatttttgcttatattaatga 36362737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 42449111 - 42449214
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||  | || || |   ||||| ||| ||||||| ||||||||||    
T  42449111 gtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacattcatcattaattgaatgtattta 42449210  T
Q  163 aaaa 166  Q
    ||||    
T  42449211 aaaa 42449214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 12745051 - 12744933
Alignment:
Q  47 ttaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattat 146  Q
    ||||||||||| | | ||||||| ||||| |||||||| || ||| ||||| ||| | | |||||||||| ||   |||||||||||||| |||||| ||    
T  12745051 ttaagtacacccttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcat 12744952  T
Q  147 taattaaatgtatttaaaa 165  Q
    ||||| |||| || |||||    
T  12744951 taattgaatgaatctaaaa 12744933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 41349809 - 41349671
Alignment:
Q  49 aagtacaccatccagtcactaatataaccaaaaattca-cttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattatt 147  Q
    ||||||||| ||| ||||||||||||| ||||||| ||  |||| ||||| ||| |||||||||||||| ||   | || || |   ||||||||| |||    
T  41349809 aagtacaccctccggtcactaatataagcaaaaatccatttttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcatt 41349710  T
Q  148 aattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||| ||||||||| ||||||| | |||| |||||||||    
T  41349709 aattgaatgtattttaaaagtgaatttttgcttatatta 41349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 51617476 - 51617342
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||| | ||||||| ||||| ||| |||||||| ||||| ||   | || || |   ||||||||| |||||||    
T  51617476 tacaccctccggtcactaatataagcaaaattccactttttagatacattcaattaatgttgtatgtggtctttattatatgtcacatacatcattaatt 51617377  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| ||||  ||||||||    
T  51617376 gaatgtatctaaaaagtggatttttggttatatta 51617342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 52168428 - 52168294
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| ||| |||| ||||||| ||||||| ||||| ||| | |||||||||||| ||   | || || |  |||||||||| |||||||    
T  52168428 tacaccctccggtcattaacataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatatgccacatacatcattaatt 52168329  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||| ||||||||  | |||| |||||||||    
T  52168328 aaatgtatctaaaaagtaaatttttgcttatatta 52168294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 22153070 - 22153190
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||| |||||||  |||||| | |||||||||||||||||| |||   |  | || || | | || |||||||||||||||||||||| |||||||    
T  22153070 taatataaacaaaaatctactttttaaatatatttaattaatgatatatgatatctttattatatatcatatacattattaattaaatgtatctaaaaag 22153169  T
Q  168 tggaattttacttatattaat 188  Q
    |  | ||||| ||||||||||    
T  22153170 taaatttttatttatattaat 22153190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 32758972 - 32759104
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| ||||||||  ||||||| | |||| |||||||||||||||||||||||  ||   | || || | | |||||| || ||||||||||| ||| ||    
T  32758972 gtcattaatataaataaaaatttattttttagatatatttaattaatgatgtacgtggtctttattatatatcacatatatcattaattaaatatatcta 32759071  T
Q  163 aaaagtggaattttacttatattaatgatcgaa 195  Q
    ||||||  | ||||| |||||||| ||||||||    
T  32759072 aaaagtaaatttttatttatattagtgatcgaa 32759104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 38455160 - 38455276
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| |||||||| ||||||| ||||||| ||||| ||| | |||||||||||| ||   | || || |   ||||||||| |||||||    
T  38455160 tacaccctccggtcattaatataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatatgtcacatacatcattaatt 38455259  T
Q  152 aaatgtatttaaaaagt 168  Q
    |||||||| ||||||||    
T  38455260 aaatgtatctaaaaagt 38455276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 50260928 - 50260992
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| || |||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  50260928 tacaccctccggttactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 50260992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 53711929 - 53711865
Alignment:
Q  129 aaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    ||||| || |||||||| | ||| || |||||||||||||| ||||||||||||| |||||||||    
T  53711929 aaagatcaaatacattaattatttaaagtatttaaaaagtgaaattttacttataataatgatcg 53711865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 17552539 - 17552488
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    ||||||||||||||||| ||||||||| ||||||| | |||| |||||||||    
T  17552539 cacatacattattaattgaatgtattttaaaagtgaatttttgcttatatta 17552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 3020655 - 3020713
Alignment:
Q  98 tatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||| | |||||||||||||| ||||||||||||| | |||||| ||||||| ||||    
T  3020655 tatttattaaatgatgtatatgatatataataaagactatatacatcattaattgaatg 3020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 22173857 - 22173799
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    ||||||||| ||||||| ||||||| ||||| || || |||| ||||||||||||||||    
T  22173857 cacatacatcattaattgaatgtatctaaaatgtagatttttgcttatattaatgatcg 22173799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 46739353 - 46739418
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||||||||    |||||| ||| ||||||||||||||||| |||| | |||||||||    
T  46739353 aattaatgatgtatatggttcataatatagatcacatacattattaattgaatgaacttaaaaagt 46739418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 52931647 - 52931700
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||| |||||||||| | || ||||| ||| ||||||||||||||    
T  52931647 gtcactaatataagcaaaaattcattctttagatacattcaattaatgatgtat 52931700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 52931751 - 52931800
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatat 184  Q
    ||||||||| ||||||| ||||||| |||||||| || ||||||||||||    
T  52931751 cacatacatcattaattgaatgtatctaaaaagtagatttttacttatat 52931800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 54726153 - 54726096
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||||||||||| ||| |||  ||||||| |||||||||| |||||||||| ||||    
T  54726153 atttaattaatgatatatgtgatttataatatagaccacatatattattaattgaatg 54726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 9492750 - 9492718
Alignment:
Q  123 tataataaagaccacatacattattaattaaat 155  Q
    ||||||||||||||||||||| |||||||||||    
T  9492750 tataataaagaccacatacataattaattaaat 9492718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 29512276 - 29512212
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| || ||||| |||| |||||||| | |||| ||||| ||||||||||||||||||    
T  29512276 tacaccctccggttactaacataagcaaaaatttattttttagatacatttaattaatgatgtat 29512212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 39289659 - 39289591
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    ||||||||||||||||| |||   |||||||  |||||||||||| ||||||| |||| | ||||||||    
T  39289659 atttaattaatgatgtaaatggtttataatatggaccacatacatcattaattgaatgaacttaaaaag 39289591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 9056016 - 9056150
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||| ||||||| ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  9056016 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 9056115  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||| ||||||||| | |||| |||||||||    
T  9056116 aaatgtatctaaaaagtgaatttttgcttatatta 9056150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 14381372 - 14381249
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||| ||    
T  14381372 gtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaattgaatgtatcta 14381273  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||||| |||| |||||||||    
T  14381272 aaaagtggatttttgcttatatta 14381249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 40098755 - 40098889
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  40098755 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaatt 40098854  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  40098855 gaatgtatctaaaaagtggatttttgcttatatta 40098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 193
Target Start/End: Complemental strand, 37716219 - 37716078
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||||| |||||| ||||||  ||||||| | |||| ||||| ||| |||||||||||||| ||| ||||||||||||| ||||| || |||||||    
T  37716219 tacaccatccggtcactgatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatatataataaagactacatatatcattaatt 37716120  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    |||| ||| ||||||||| |||||||||||||||||||||||    
T  37716119 aaatatatctaaaaagtgaaattttacttatattaatgatcg 37716078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 26014714 - 26014580
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||||||||||||||||| ||||||| ||||||| ||||| ||  ||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  26014714 gtacaccttccagtcactaatataagcaaaaatccactttttagatacatc-aattaataatgtatgtgacatataataaagaccacatacatcattaat 26014616  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||||||| ||||||||| | |||| |||||||||    
T  26014615 tgaatgtatctaaaaagtgaatttttgcttatatta 26014580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 13228876 - 13228982
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| || |||| | ||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||    
T  13228876 gtcactaatataaacaaaaatccattttttaaatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattaaatgtatcta 13228975  T
Q  163 aaaagtg 169  Q
    |||||||    
T  13228976 aaaagtg 13228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 7377688 - 7377568
Alignment:
Q  64 tcactaatataaccaaaaattcacttttc-agatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||||||||||| |||||||||| ||||  ||||| ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||| ||    
T  7377688 tcactaatataagcaaaaattcatttttttagatacattcaattaatgatgtatgtgacatataataaagcccacatacatcattaattgaatgtatcta 7377589  T
Q  163 aaaagtggaattttacttata 183  Q
    ||||||| | |||| ||||||    
T  7377588 aaaagtgaatttttgcttata 7377568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 9808381 - 9808505
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| |||||||| |||||| | ||| ||| |||||||| ||||| |||  ||||||||||||||||||||| ||||||||||||||| |||    
T  9808381 tcactaatataaacaaaaatttactttttatatacattcaattaatggtgtatgtga--tataataaagaccacatacataattaattaaatgtatctaa 9808478  T
Q  164 aaagtggaattttacttatattaatga 190  Q
    ||| || | |||| |||||||||||||    
T  9808479 aaaatgaatttttgcttatattaatga 9808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 13211373 - 13211246
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| ||||||||  ||||||  | |||| ||||| ||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||    
T  13211373 gtcattaatataagtaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattaaatgtatcta 13211274  T
Q  163 aaaagtggaattttacttatattaatga 190  Q
    |||| |  | ||||||||||||||||||    
T  13211273 aaaaataaatttttacttatattaatga 13211246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 29451763 - 29451836
Alignment:
Q  93 agatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29451763 agatatattcaattaatgatgtatgtgacatataattaagaccacatacattattaattgaatgtatttaaaaa 29451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 15285648 - 15285764
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| ||||||||  ||||||| | |||| | ||| |||||||||||||||||| ||||||||||||||||| | ||||||  ||||||    
T  15285648 tacaccctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaatt 15285747  T
Q  152 aaatgtatttaaaaagt 168  Q
     ||||||||||||||||    
T  15285748 gaatgtatttaaaaagt 15285764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 15466017 - 15466133
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| ||||||||  ||||||| | |||| | ||| |||||||||||||||||| ||||||||||||||||| | ||||||  ||||||    
T  15466017 tacaccctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaatt 15466116  T
Q  152 aaatgtatttaaaaagt 168  Q
     ||||||||||||||||    
T  15466117 gaatgtatttaaaaagt 15466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 9056167 - 9056033
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||   | || || |   ||||||||| ||||||    
T  9056167 gtacaccctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaat 9056068  T
Q  151 taaatgtatttaaaaagtggaattttacttatatt 185  Q
    | ||||||| ||||||||| | |||| ||||||||    
T  9056067 tgaatgtatctaaaaagtgaatttttgcttatatt 9056033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 11692148 - 11692059
Alignment:
Q  96 tatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||| | ||||||||||| ||||  ||||||||    
T  11692148 tatattcaattaatgatgtatgtgacatataataaagatcacatacatcattaatt-aatgtgtctaaaaagtggatttttgtttatatta 11692059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 14381233 - 14381367
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| ||   | || || | | ||||||||| |||||||    
T  14381233 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatatcacatacatcattaatt 14381332  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| ||||  ||||||||    
T  14381333 gaatgtatctaaaaagtggatttttgtttatatta 14381367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 26014575 - 26014697
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| ||   | || || |   |||||||||||||||||  |||||| ||    
T  26014575 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaatt-gatgtatcta 26014673  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||||| |||| |||||||||    
T  26014674 aaaagtggatttttgcttatatta 26014697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 1739712 - 1739634
Alignment:
Q  50 agtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataat 128  Q
    |||||||| ||| ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| | |||||||||    
T  1739712 agtacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtaacatataat 1739634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 10117116 - 10117024
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacat 143  Q
    ||||||||||| ||||||| ||||| |||||||| || ||| ||||  ||| |||||||||||||||||| || || || |||||||||||||    
T  10117116 gtacaccatccggtcactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacat 10117024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 40098905 - 40098771
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| ||   | || || |   |||||| || |||||||    
T  40098905 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaatt 40098806  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||||||| || |||| |||||||||    
T  40098805 gaatgtatctaaaaagtagatttttgcttatatta 40098771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 7377549 - 7377613
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||||||| ||||||  ||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  7377549 tacaccatccggtcactggtataagcaaaaattcactttttagatacattcaattaatgatgtat 7377613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 15232311 - 15232405
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
    ||||||| ||||||||||||  |||||||| |||||   |||||| ||||||| |||| ||||| |||||||||||||  |||||| | ||||||    
T  15232311 atttaataaatgatgtatatagcatataattaagactggatacatcattaattgaatgaatttagaaagtggaattttgtttatatcagtgatcg 15232405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 29360798 - 29360856
Alignment:
Q  107 aatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||||||| || |||||    
T  29360798 aatgatgtatatgatctataacaaagaccatatacattattaattaaatgaatataaaa 29360856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 2810157 - 2810089
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaa 131  Q
    ||||||||||||| |||||||  |||||  | ||| ||||||| |||||| ||||||||||||||||||    
T  2810157 gtcactaatataaacaaaaatctactttgtacatacatttaataaatgatatatatgacatataataaa 2810089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 13211317 - 13211372
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    ||||||||| ||||||| ||||||| |||||| | || ||||||||||||||||||    
T  13211317 cacatacatcattaattgaatgtatctaaaaaatagatttttacttatattaatga 13211372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 15285715 - 15285660
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    ||||||||| |||||||||||||||||||||| |  | ||||| ||||||||||||    
T  15285715 cacatacatcattaattaaatgtatttaaaaaataaatttttatttatattaatga 15285660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 15466084 - 15466029
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    ||||||||| |||||||||||||||||||||| |  | ||||| ||||||||||||    
T  15466084 cacatacatcattaattaaatgtatttaaaaaataaatttttatttatattaatga 15466029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 18603577 - 18603490
Alignment:
Q  78 aaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    ||||||| || ||| |||| |||| | | |||||||||| ||  |||||||||||| || ||||||||||||||||||| || |||||    
T  18603577 aaaaattaacattttagatttattaattaaatgatgtatgtggtatataataaagatcatatacattattaattaaatgaatctaaaa 18603490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 2296524 - 2296614
Alignment:
Q  107 aatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcgaaag 197  Q
    |||||||||||||   ||||||||||||||  ||||||||||||| |||| || ||||| |   ||||||||||||| || |||| |||||    
T  2296524 aatgatgtatatggtctataataaagaccatgtacattattaattgaatgaatctaaaatgcaaaattttacttataatagtgattgaaag 2296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 6197967 - 6197833
Alignment:
Q  56 ccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaat 155  Q
    |||||| ||||||| ||||| ||||| || |||||| ||||| ||| ||| | | |||||| | |  ||| |||||||| | ||||||||   ||| |||    
T  6197967 ccatccggtcactattataagcaaaactttactttttagatacattaaataattaatgtatttaatctatgataaagactagatacattaactatttaat 6197868  T
Q  156 gtatttaaaaagtggaattttacttatattaatga 190  Q
    |||| ||||||||||| |||| |||||| ||||||    
T  6197867 gtatctaaaaagtggagttttgcttataataatga 6197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 9808507 - 9808453
Alignment:
Q  62 agtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||| |||||||| |||||||||| |||| ||||| ||||||||||| ||||||    
T  9808507 agtcattaatataagcaaaaattcattttttagatacatttaattaattatgtat 9808453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 32016796 - 32016901
Alignment:
Q  79 aaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttac 178  Q
    ||||||||||||| || |  ||||| |||||||||||||||| | ||| || | ||||||||||| ||||| | |||| |  |||||||| ||||||| |    
T  32016796 aaaattcactttttaggttcatttatttaatgatgtatatgatacatattataaaccacatacatcattaaatgaatgaacctaaaaagt-gaattttgc 32016894  T
Q  179 ttatatt 185  Q
    |||||||    
T  32016895 ttatatt 32016901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 33574930 - 33574868
Alignment:
Q  54 caccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||| ||| ||||||||||||| ||||||| ||| ||| ||||| ||| ||||||||||||||    
T  33574930 caccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtat 33574868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 11295811 - 11295678
Alignment:
Q  50 agtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa 149  Q
    |||||||||||| | ||||| ||||| |||||||| || ||| ||||  ||| | | ||||||| || ||   ||||||||||||||||||||| ||| |    
T  11295811 agtacaccatccggccactactataaacaaaaattaacattttagattcattcattaaatgatgcatgtggtttataataaagaccacatacatcattta 11295712  T
Q  150 ttaaatgtatttaaaaagtggaattttacttata 183  Q
     | ||||||| ||||| || || |||| ||||||    
T  11295711 atgaatgtatctaaaatgttgatttttgcttata 11295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 2805879 - 2805939
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    ||||||||||| || |||||||||||||| |||| |||||||| ||  ||||||| |||||    
T  2805879 tataataaagatcatatacattattaattgaatgaatttaaaatgtaaaattttatttata 2805939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 37716085 - 37716129
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgat 112  Q
    ||||||||  |||| ||||||||| ||||||||||||||||||||    
T  37716085 taatataagtaaaatttcactttttagatatatttaattaatgat 37716129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 43426773 - 43426630
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| |||||||| |||||||| | |||| ||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  43426773 tacaccctccggtcattaatataagcaaaaatttattttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaatt 43426674  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatcgaa 195  Q
     ||||||||||||||||||| |||||||||||||| ||| ||||    
T  43426673 gaatgtatttaaaaagtggatttttacttatattagtgaccgaa 43426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 5574116 - 5574239
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||||||||||| | ||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||| ||    
T  5574116 gtcactaatataagcaaaaattcacttttaaaatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgtatcta 5574215  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || |||| |||||||||    
T  5574216 aaaagtagatttttgcttatatta 5574239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 34248549 - 34248426
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| ||    
T  34248549 gtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatctgacatataataaagacaacatacatcattaattgaatgtatcta 34248450  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  34248449 aaaagtgaatttttgcttatatta 34248426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 3714345 - 3714224
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    ||||||||||| | |||||||||||||| || |||||  |||||||||||||| ||| ||||||||||||| |||||||| ||||||| ||||||| |||    
T  3714345 tcactaatatagc-aaaaattcactttttaggtatatccaattaatgatgtatgtgatatataataaagactacatacataattaattgaatgtatctaa 3714247  T
Q  164 aaagtggaattttacttatatta 186  Q
    |||||||  ||||||||||||||    
T  3714246 aaagtggttttttacttatatta 3714224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 1981118 - 1980996
Alignment:
Q  63 gtcactaatataaccaaaaat-tcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattt 161  Q
    ||||||||||||| ||||||| ||| |||| ||||| ||| |||||||||||||| ||||||||||||||| ||||||| || ||||||| |||||||||    
T  1981118 gtcactaatataagcaaaaatctcattttt-agatacattcaattaatgatgtatgtgacatataataaag-ccacataaatcattaattgaatgtattt 1981021  T
Q  162 aaaaagtggaattttacttatatta 186  Q
    |||| |||||||||| |||||||||    
T  1981020 aaaatgtggaattttgcttatatta 1980996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 3887978 - 3887838
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||   ||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||||| || |||||||    
T  3887978 tacaccctccggtcactaatataagcaaaaatcatctttttagatacattcaattaatgatgtatgtgacatataataaagactacataaatcattaatt 3887879  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatc 192  Q
     ||||||| |||||| | || |||| ||||||||| |||||    
T  3887878 gaatgtatctaaaaaatagatttttgcttatattagtgatc 3887838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 30902282 - 30902402
Alignment:
Q  66 actaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    |||||||||| |||||||||| |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||| || ||||||| ||||||| |||||    
T  30902282 actaatataagcaaaaattcattttttaaatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattgaatgtatctaaaa 30902381  T
Q  166 agtggaattttacttatatta 186  Q
    |||  | |||| |||||||||    
T  30902382 agtaaatttttgcttatatta 30902402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 6567049 - 6566943
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| |||| || ||||||||| ||||||||||||||  ||||||||||||| || | |||||||||||||||||| ||| ||    
T  6567049 gtcactaatataagcaaaaatccactatttagatatattcaattaatgatgtatgcgacatataataaaaactatatacattattaattaaatatatcta 6566950  T
Q  163 aaaagtg 169  Q
    |||||||    
T  6566949 aaaagtg 6566943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 22373616 - 22373719
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  | |||| | ||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| | ||||||| ||    
T  22373616 gtcactaatataagcaaaaatatattttttaaatatattcaattaatgatgtatataacatataataaagaccacatacatcattaactgaatgtatcta 22373715  T
Q  163 aaaa 166  Q
    ||||    
T  22373716 aaaa 22373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 38594489 - 38594355
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  | |||| ||||| ||| |||||||||||||| ||||||||||||| ||||||||| || |||| ||    
T  38594489 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagtt 38594390  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||| ||| || |||| |||||||||    
T  38594389 gaatgtatctaaagagtagatttttgcttatatta 38594355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 38598085 - 38597951
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  | |||| ||||| ||| |||||||||||||| ||||||||||||| ||||||||| || |||| ||    
T  38598085 tacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagtt 38597986  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||| ||| || |||| |||||||||    
T  38597985 gaatgtatctaaagagtagatttttgcttatatta 38597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 25278180 - 25278312
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| |||||||| || ||| ||||| |||||||||||||||||| ||| | ||||||||||||| | |||  ||||||| ||||||| ||    
T  25278180 gtcattaatataagcaaaaatttaccttttagatacatttaattaatgatgtatgtgatacataataaagaccataaacaacattaattgaatgtatata 25278279  T
Q  163 aaaagtggaattttacttatattaatgatcgaa 195  Q
    || |||| | |||| |||||| |||||| ||||    
T  25278280 aagagtgaatttttgcttatactaatgaccgaa 25278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 20504357 - 20504254
Alignment:
Q  83 ttcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttat 182  Q
    ||||||||| ||||| ||| |||||||||||||||| ||||||||||||||  | |||||| ||||||| ||| ||| |||||||| || ||||  ||||    
T  20504357 ttcactttttagatacattcaattaatgatgtatataacatataataaagattatatacatcattaattgaatatatctaaaaagtagatttttgtttat 20504258  T
Q  183 atta 186  Q
    ||||    
T  20504257 atta 20504254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 34248420 - 34248544
Alignment:
Q  62 agtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattt 161  Q
    |||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||| |    | || || |   || |||||| ||||||| ||||||| |    
T  34248420 agtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgttgtctttattatatgtcagatacatcattaattgaatgtatct 34248519  T
Q  162 aaaaagtggaattttacttatatta 186  Q
    |||||||||| |||| |||||||||    
T  34248520 aaaaagtggatttttgcttatatta 34248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 38618243 - 38618146
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa 149  Q
    |||||| ||| |||| ||||||||  ||||||  | || | ||||| ||| |||||||||||||| ||| |||||||||||||||||||||| |||||    
T  38618243 tacaccctccggtcattaatataagtaaaaatctatttgttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaa 38618146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 6566921 - 6566976
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatat 118  Q
    ||||||||||| | |||||| |||||||| ||||||||||||||||| ||||||||    
T  6566921 gtcactaatatgagcaaaaaatcactttttagatatatttaattaataatgtatat 6566976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 20504249 - 20504304
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatat 118  Q
    ||||||||||||| |||||||  |||||| ||||||||| ||||||||||||||||    
T  20504249 gtcactaatataaacaaaaatctactttttagatatattcaattaatgatgtatat 20504304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 30902407 - 30902284
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||| |||||| ||||| ||| |||||||||| ||| ||   | || || |   ||||||||| ||||||| ||||||||||    
T  30902407 gtcactaatataagcaaaaatttactttttagatacattcaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaatgtattta 30902308  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||| || | |||| |||||||||    
T  30902307 aaaaatgaatttttgcttatatta 30902284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 5574255 - 5574121
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| ||   | || || |   |||||| || |||||||    
T  5574255 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaatt 5574156  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||||| ||||||| | |||| |||||||||    
T  5574155 gaatgtattttaaaagtgaatttttgcttatatta 5574121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 10041584 - 10041653
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||||||||| ||   ||||||| ||||||||||||| ||||||| |||| | |||||||||    
T  10041584 atttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacttaaaaagt 10041653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 41823783 - 41823840
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||||||||||||||| |||  |||| || ||||||||||||| ||||||||||||    
T  41823783 atttaattaatgatgtatttgatttatattatagaccacatacatcattaattaaatg 41823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 7837092 - 7837171
Alignment:
Q  64 tcactaatataaccaaaaat-tcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacat 143  Q
    |||||||||||| ||||||| ||| |||| ||||| ||| ||||||||||  || |||||||||||||||||||| |||||    
T  7837092 tcactaatataaacaaaaatctcattttt-agatacattcaattaatgataaatgtgacatataataaagaccacgtacat 7837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 17843997 - 17844062
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||||||||   |||||||  |||||||||||| ||||||| |||| | |||||||||    
T  17843997 aattaatgatgtatatggtttataatatggaccacatacatcattaattgaatgaacttaaaaagt 17844062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 15859645 - 15859549
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcgaaaggt 199  Q
    |||||||||||||||||| || || || |||| |||||||||||| | | |||| |||| ||  || || ||||||||||| || |||||| |||||    
T  15859645 aattaatgatgtatatgatatttattatagacaacatacattatttaatgaatgaatttgaattgttgatttttacttataatagtgatcggaaggt 15859549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 41823839 - 41823771
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||||||||||||| ||   ||||||| | | || |||||| |||||||||||| ||||||||||    
T  41823839 atttaattaatgatgtatgtggtctataatataaatcaaatacatcattaattaaatgaatttaaaaag 41823771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 17268158 - 17268024
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||| ||||| |||||||||||||  |||| ||||||||  ||||| ||| ||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  17268158 tacatcatccggtcactaatataagtaaaagttcactttctagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaatt 17268059  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
    ||||||||||||||| | || ||||||||||||||    
T  17268058 aaatgtatttaaaaaatagatttttacttatatta 17268024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 21506452 - 21506596
Alignment:
Q  46 attaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacatta 145  Q
    ||||| |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| |    
T  21506452 attaaatacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatca 21506551  T
Q  146 ttaattaaatgtatttaaaaagtggaattttacttatattaatga 190  Q
    |||||| ||||||| |||||| |  | |||| |||||||||||||    
T  21506552 ttaattgaatgtatctaaaaattaaatttttgcttatattaatga 21506596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 17773646 - 17773512
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| ||| |||||||||||||||||||||| ||| |||    
T  17773646 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcatttatt 17773547  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| ||||  ||||||||    
T  17773546 gaatgtatctaaaaagtggatttttgtttatatta 17773512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 21998173 - 21998043
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||| ||||||| |||||||  |||||| ||||| ||| |||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||    
T  21998173 gtcaccaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaatatcacatacattattaattgaatgtatcta 21998074  T
Q  163 aaaagtggaattttacttatattaatgatcg 193  Q
    |||| || | |||| ||||||||| ||||||    
T  21998073 aaaaatgtatttttgcttatattagtgatcg 21998043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 30397870 - 30397736
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    ||||||| ||| ||||||||||||| ||||||| |  |||| ||||| ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  30397870 gtacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatcattaat 30397772  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||||||| ||||| ||||| ||||  ||||||||    
T  30397771 tgaatgtatctaaaatgtggatttttgtttatatta 30397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 30460608 - 30460742
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||| ||||| |||| |||||||| ||||||| ||||||  ||||||||| ||| |||||||||| ||| |||||||||||||||||||||| |||||||    
T  30460608 tacatcatccggtcaataatataagcaaaaatccactttgtagatatattcaatcaatgatgtatgtgatatataataaagaccacatacatcattaatt 30460707  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||| ||| ||||||||  | |||| |||||||||    
T  30460708 gaatctatctaaaaagtaaatttttgcttatatta 30460742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 31536461 - 31536322
Alignment:
Q  49 aagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataa---agaccacatacatta 145  Q
    ||||||||| ||||||||||||||||| |||||||| |||||| | ||| ||| ||||||| ||| || ||||| |||||||   | ||||||||||| |    
T  31536461 aagtacacc-tccagtcactaatataagcaaaaatttactttttaaatacattcaattaattatgcatgtgacacataataataaaaaccacatacatca 31536363  T
Q  146 ttaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||| ||||||||| |||||||| || |||| |||||||||    
T  31536362 ttaaataaatgtatctaaaaagttgatttttgcttatatta 31536322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 21506608 - 21506474
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||||| |||| |||||||| |||||||| | |||| ||||| ||| |||||||||||||| |||  | || || |   ||||||||| |||||||    
T  21506608 tacaccatccggtcattaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaatt 21506509  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  21506508 gaatgtatctaaaaagtggatttttgcttatatta 21506474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 28577730 - 28577612
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||| |||||||  |||||| ||||| ||| ||||||| |||||| ||| |||||||||||||||||||    ||||||||||||||| ||||||     
T  28577730 taatataagcaaaaatatactttttagatacattcaattaataatgtatgtgatatataataaagaccacatatcccattaattaaatgtatctaaaaaa 28577631  T
Q  168 tggaattttacttatatta 186  Q
    || | |||| |||||||||    
T  28577630 tgaatttttgcttatatta 28577612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 30460757 - 30460624
Alignment:
Q  53 acaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatta 152  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| ||   | || || | | ||||||||| ||| |||     
T  30460757 acaccctccagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcattgattg 30460658  T
Q  153 aatgtatttaaaaagtggaattttacttatatta 186  Q
    ||| ||| || |||||||| |||| |||||||||    
T  30460657 aatatatctacaaagtggatttttgcttatatta 30460624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 17773507 - 17773630
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| ||| |||||||||| ||   | || || | | ||||||||| ||||||| ||||||| ||    
T  17773507 gtcactaatataaacaaaaatccactttttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcattaattgaatgtatcta 17773606  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || |||| |||||||||    
T  17773607 aaaagtagatttttgcttatatta 17773630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 21998046 - 21998167
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| ||||||| || |||| ||||| ||| ||||||| |||||| ||| || || || |   ||||||||| ||||||| ||||||| |||    
T  21998046 tcactaatataagcaaaaatacattttttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcattaattgaatgtatctaa 21998145  T
Q  164 aaagtggaattttacttatatt 185  Q
    ||||| || |||| ||||||||    
T  21998146 aaagtagatttttgcttatatt 21998167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 28577607 - 28577731
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||||| |||| ||||| ||||||||||||   ||| ||   | || || | | ||||||||||||||||| ||||||| ||    
T  28577607 gtcactaatataagcaaaaattcattttttagatacatttaattaatgggatatgtggtctttattatatatcacatacattattaattgaatgtatcta 28577706  T
Q  163 aaaagtggaattttacttatattaa 187  Q
    ||||||  | |||| ||||||||||    
T  28577707 aaaagtatatttttgcttatattaa 28577731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 30397720 - 30397853
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| ||| ||| ||||| ||| |||||||||||||| || | | || || |   ||||||||| |||||||    
T  30397720 tacaccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtggc-tttattatatgtcacatacatcattaatt 30397818  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||  ||| |||| |||||||||    
T  30397819 gaatgtatctaaaaaagggatttttgcttatatta 30397853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 15467691 - 15467602
Alignment:
Q  79 aaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||| | |||||||||  ||| |||||||||||||| |||  ||||||| ||| ||||||||| | |||||||||| || ||||||||    
T  15467691 aaaatttatttttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataattaaatgaatctaaaaagt 15467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 31536306 - 31536370
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| ||||| ||||||||||||    
T  31536306 tacaccctccggtcactaatataagcaaaaatcaactttttagatacatttatttaatgatgtat 31536370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 17268091 - 17268142
Alignment:
Q  135 cacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    ||||||||||||||||| ||||||| || |||||| | ||||||||||||||    
T  17268091 cacatacattattaattgaatgtatctagaaagtgaacttttacttatatta 17268142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 10258306 - 10258440
Alignment:
Q  59 tccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgta 158  Q
    ||||||||||  ||||| |||||||  || ||| ||||  ||||| | ||||||||| |||   |||||||| ||||| |||||| ||||||| |||| |    
T  10258306 tccagtcactgttataaacaaaaatcaacattttagattcatttattaaatgatgtacatggtctataataatgaccatatacatcattaattgaatgaa 10258405  T
Q  159 tttaaaaagtggaattttacttatattaatgatcg 193  Q
    | ||||||||    ||||||||||| |||||||||    
T  10258406 tctaaaaagttattttttacttataataatgatcg 10258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 12349837 - 12349942
Alignment:
Q  79 aaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttac 178  Q
    ||||||||||||| || |  ||| | |||||||||||| ||||  ||||||  |||||||||||| ||||| | |||| || ||||||||  ||||||||    
T  12349837 aaaattcactttttaggttaattcatttaatgatgtatgtgactcataatatggaccacatacatcattaaatgaatgaatctaaaaagt-aaattttac 12349935  T
Q  179 ttatatt 185  Q
    |||||||    
T  12349936 ttatatt 12349942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 14093156 - 14093095
Alignment:
Q  122 atataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    ||||||||||||| | |||||||| | ||| |||||||||||||||| || |||| ||||||    
T  14093156 atataataaagactagatacattaattatttaatgtatttaaaaagttgagtttttcttata 14093095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 3673886 - 3673822
Alignment:
Q  83 ttcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattatt 147  Q
    ||||||||| ||||  ||| ||| |||||||||||||| ||||||||  || |||||||||||||    
T  3673886 ttcactttttagattcattcaataaatgatgtatatgatatataatatggatcacatacattatt 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 28554949 - 28555073
Alignment:
Q  59 tccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgta 158  Q
    |||||||||||||||||  ||||||| || ||| || |  ||| | |||||||||||||||   ||||||||||||||  | ||| ||||| |||||| |    
T  28554949 tccagtcactaatataagtaaaaatttacattttaggttcattcatttaatgatgtatatggtctataataaagaccatgtgcatcattaaataaatgaa 28555048  T
Q  159 tttaaaaagtggaattttacttata 183  Q
    | ||||| || || |||| ||||||    
T  28555049 tctaaaatgtagatttttgcttata 28555073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 28737891 - 28737840
Alignment:
Q  133 accacatacattattaattaaatgtatttaaaaagtggaattttacttatatt 185  Q
    ||||||||||| ||||||| |||| |||||||||||  |||||||||||||||    
T  28737891 accacatacatcattaattgaatgaatttaaaaagt-caattttacttatatt 28737840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 38238929 - 38238805
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  38238929 tacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 38238830  T
Q  152 aaatgtatttaaaaagtggaatttt 176  Q
     ||||||| ||||||||| ||||||    
T  38238829 gaatgtatctaaaaagtgaaatttt 38238805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 29498917 - 29498787
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| ||||||| || |||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||| ||| ||    
T  29498917 gtcattaatataagcaaaaatccattttttagatacatttaattaattatgtatgtgacatataataaagaccacatacatcattaattgaatatatcta 29498818  T
Q  163 aaaagtggaattttacttatattaatgatcg 193  Q
    ||| ||||| |||| ||||||||| ||||||    
T  29498817 aaatgtggatttttgcttatattattgatcg 29498787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 22281450 - 22281574
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| |||||||  | |||| ||||||||| |||||||||||||||||||||||||||||||  |||| ||| ||||||| |||||||||||    
T  22281450 tcactaatataaacaaaaatctaatttttagatatattcaattaatgatgtatatgacatataataaagagtacattcatcattaattcaatgtatttaa 22281549  T
Q  164 aaagtggaattttacttatattaat 188  Q
    |||||  | |||| |||||||||||    
T  22281550 aaagtaaatttttgcttatattaat 22281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 25079341 - 25079218
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| ||||||||||||| || ||||||||| ||||||| ||||||| ||    
T  25079341 gtcactaatataaacaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggatcacatacatcattaattgaatgtatcta 25079242  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || |||| |||||||||    
T  25079241 aaaagtagatttttgcttatatta 25079218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 22106800 - 22106678
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| ||||| |||| |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||| |||    
T  22106800 tcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaa 22106701  T
Q  164 aaagtggaattttacttatatta 186  Q
    ||| | || |||| |||||||||    
T  22106700 aaaatagatttttgcttatatta 22106678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 40416901 - 40417035
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||| |||||||| |||||||||||  || ||||| ||| ||||||||||| || ||||||||||||||||||| |||||| |||||||    
T  40416901 tacaccctccggtcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaatt 40417000  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||| | |||| |||||||||    
T  40417001 gaatgtatctaaaaagtgaatttttgcttatatta 40417035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 40529551 - 40529673
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| ||||| |||| |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||| |||    
T  40529551 tcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaa 40529650  T
Q  164 aaagtggaattttacttatatta 186  Q
    ||| | || |||| |||||||||    
T  40529651 aaaatagatttttgcttatatta 40529673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 1706826 - 1706962
Alignment:
Q  50 agtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaa 149  Q
    |||||||| ||| |||||||||||||  ||||||| | |||| ||||| ||| |||||||||||||| ||||||||||||||||||| |||||| |||||    
T  1706826 agtacaccctccggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagaccatatacatcattaa 1706925  T
Q  150 ttaaatgtatttaaaaagtggaattttacttatatta 186  Q
     | ||||||| |||||| || | |||| |||||||||    
T  1706926 atgaatgtatctaaaaaatgaatttttgcttatatta 1706962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 34703449 - 34703572
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| |||||||||||  || ||||| ||| ||||||||||| || ||||||||||||||||||| |||||| ||||||| ||||||| ||    
T  34703449 gtcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaatgtatcta 34703548  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  34703549 aaaagtgaatttttgcttatatta 34703572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 24936544 - 24936662
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||| |||||||||||||||  |||| ||| ||||||| |||| | |||||||||||||||||||||||||| ||||||| ||| ||| |||||||    
T  24936544 taatataaacaaaaattcactttttggatacattcaattaattatgtctgtgacatataataaagaccacatacatcattaattgaatatatctaaaaag 24936643  T
Q  168 tggaattttacttatatta 186  Q
    || | ||||| ||||||||    
T  24936644 tgaatttttatttatatta 24936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 18234479 - 18234353
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatata---ataaagaccacatacattattaattaaatgtat 159  Q
    ||||||||||||| |||||||| | |||| ||||| ||| |||||||||||||| |||||||||   ||||||||||| ||||| ||||| |||||||||    
T  18234479 gtcactaatataaacaaaaatttaatttttagatacattcaattaatgatgtatgtgacatataataataaagaccacctacataattaaataaatgtat 18234380  T
Q  160 ttaaaaagtggaattttacttatatta 186  Q
    ||||||||| || ||||  ||||||||    
T  18234379 ttaaaaagtagatttttgtttatatta 18234353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 27554630 - 27554528
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaa 163  Q
    |||||||||||| |||||||| |||||| | ||| ||| |||||||||||||| ||| |||||||||||| ||||||||| ||||||| ||||||| |||    
T  27554630 tcactaatataagcaaaaatttacttttaaaatacattcaattaatgatgtatgtgatatataataaagatcacatacatcattaattgaatgtatctaa 27554531  T
Q  164 aaa 166  Q
    |||    
T  27554530 aaa 27554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 46943950 - 46944070
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||       |||||||| ||||||| ||||||| ||    
T  46943950 gtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtgacatataat-------acatacatcattaattgaatgtatcta 46944042  T
Q  163 aaaagtggaattttacttatattaatga 190  Q
    |||| |  | ||||||||||||||||||    
T  46944043 aaaattaaatttttacttatattaatga 46944070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 716265 - 716343
Alignment:
Q  88 ttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaa 166  Q
    |||| ||||| ||| |||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||| ||||||    
T  716265 tttttagatacattcaattaatgatgtatatgacatagaataaagatcacatacatcattaattgaatgtatctaaaaa 716343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 4406509 - 4406428
Alignment:
Q  105 ttaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| | |||| | |||||||    
T  4406509 ttaatgatgtatgtgacatataataaagacaacatacatcattaattgaatgtatctaaaaagtgaatttttgcatatatta 4406428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 34703588 - 34703521
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatg 119  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||    
T  34703588 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatg 34703521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 21387713 - 21387587
Alignment:
Q  60 ccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtat 159  Q
    ||||||| || ||||| ||||| || |||||| ||||  ||||||| |||||||||| ||  ||||||||||||| |||||||| ||||||| |||| ||    
T  21387713 ccagtcaatattataagcaaaattttactttttagattcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaatgaat 21387614  T
Q  160 ttaaaaagtggaattttacttatatta 186  Q
     || ||| |||| |||| |||||||||    
T  21387613 ctagaaaatggatttttgcttatatta 21387587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 29498794 - 29498916
Alignment:
Q  68 taatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaag 167  Q
    |||||||| ||||||| ||| ||| ||||||||| |||||||||||||| ||   | || || |   ||||||||| ||||||||||||||| ||||||     
T  29498794 taatataagcaaaaatccacattttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacataattaattaaatgtatctaaaaaa 29498893  T
Q  168 tggaattttacttatattaatga 190  Q
    |||| |||| |||||||||||||    
T  29498894 tggatttttgcttatattaatga 29498916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 45000637 - 45000739
Alignment:
Q  93 agatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatc 192  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||||||| || |||| ||||| | ||||||||  | |||| ||||||||| ||| |    
T  45000637 agatacattcaattaatgatgtgtgtgacatataataaagaccacatacatcatcaattgaatgtgtctaaaaagtacatttttgcttatattagtgacc 45000736  T
Q  193 gaa 195  Q
    |||    
T  45000737 gaa 45000739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 40417040 - 40416984
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatg 119  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||    
T  40417040 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatg 40416984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 38238778 - 38238913
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaatt-cacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaat 150  Q
    |||||| ||| ||||||||||||| |||||||| ||||||| ||||| ||| |||||||||||||| ||   | || || |   ||||||||| ||||||    
T  38238778 tacaccctccggtcactaatataagcaaaaatttcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaat 38238877  T
Q  151 taaatgtatttaaaaagtggaattttacttatatta 186  Q
    | ||||||| |||||||| || |||| |||||||||    
T  38238878 tgaatgtatctaaaaagtagatttttgcttatatta 38238913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 1706978 - 1706844
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    ||||||||  |||||||||||||| |||||||||| |||| ||||| ||| | |||||||||||||||   | || || |   ||||||||| |||||||    
T  1706978 tacaccatttagtcactaatataagcaaaaattcattttttagatacattcatttaatgatgtatatggtctttattatatgtcacatacatcattaatt 1706879  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||||| |  | ||||||||||||||    
T  1706878 gaatgtatctaaaaaataaatttttacttatatta 1706844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 27554503 - 27554633
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||||||||||||  ||||||| | |||| ||||| ||| |||||||||||||| |||  | || || | | ||||||||| ||||||| |||||||||     
T  27554503 gtcactaatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgtatttt 27554602  T
Q  163 aaaagtggaattttacttatattaatgatcg 193  Q
    ||||||  | |||| ||||||||| ||||||    
T  27554603 aaaagtaaatttttgcttatattagtgatcg 27554633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 24936664 - 24936614
Alignment:
Q  66 actaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||  |||||||||||||| ||||||||| ||||||||||||||    
T  24936664 actaatataaataaaaattcactttttagatatattcaattaatgatgtat 24936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 4406423 - 4406476
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||  ||||||||||||||| ||||| ||| ||||||||||||||    
T  4406423 gtcactaatatatgcaaaaattcactttttagatacattcaattaatgatgtat 4406476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 22106673 - 22106802
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  | |||| ||||||||| |||||||||||||| ||   | || || |   ||||||||| ||||||| ||||||| ||    
T  22106673 gtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatcta 22106772  T
Q  163 aaaagtggaattttacttatattaatgatc 192  Q
    |||| || ||||||  |||||||| |||||    
T  22106773 aaaaatgaaattttgtttatattagtgatc 22106802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 40529678 - 40529549
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  | |||| ||||||||| |||||||||||||| ||   | || || |   ||||||||| ||||||| ||||||| ||    
T  40529678 gtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatcta 40529579  T
Q  163 aaaagtggaattttacttatattaatgatc 192  Q
    |||| || ||||||  |||||||| |||||    
T  40529578 aaaaatgaaattttgtttatattagtgatc 40529549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 18654655 - 18654596
Alignment:
Q  88 ttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattatt 147  Q
    |||| |||| |||||||| |||||||||||||  |||| ||| |||||||||||||||||    
T  18654655 tttttagatttatttaataaatgatgtatatggtatattatatagaccacatacattatt 18654596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 25079213 - 25079336
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||  |||||| ||||| ||| |||||||||||||| |||    || || |   ||||||||| ||||||| ||||||| ||    
T  25079213 gtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaattgaatgtatcta 25079312  T
Q  163 aaaagtggaattttacttatatta 186  Q
    |||||| || ||||  ||||||||    
T  25079313 aaaagtagatttttgtttatatta 25079336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 22332343 - 22332424
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatt 185  Q
    ||||||||||||||||||   |||||| ||| ||||||||| ||||||| |||| | |||||| ||  |||||||||||||||    
T  22332343 aattaatgatgtatatgatccataatatagatcacatacatcattaattcaatgaacttaaaatgt-aaattttacttatatt 22332424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 15051078 - 15051191
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||| ||||||| |||||||| |  ||| ||||| ||| ||| ||||||||||||    || |||||||  ||||||||||||| |||    
T  15051078 tacaccctccggtcacaaatataagcaaaaatttatgttttagatacattcaataaatgatgtatattgtctacaataaaggtcacatacattatttatt 15051177  T
Q  152 aaatgtatttaaaa 165  Q
     |||| ||||||||    
T  15051178 gaatgaatttaaaa 15051191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 26385691 - 26385724
Alignment:
Q  123 tataataaagaccacatacattattaattaaatg 156  Q
    ||||||||||||||||||||| ||||||||||||    
T  26385691 tataataaagaccacatacatcattaattaaatg 26385724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 26477294 - 26477238
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatga 120  Q
    |||||| ||||| |||||||| |  ||| |||| |||||||||||||||||||||||    
T  26477294 tcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatga 26477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 26553734 - 26553678
Alignment:
Q  64 tcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatga 120  Q
    |||||| ||||| |||||||| |  ||| |||| |||||||||||||||||||||||    
T  26553734 tcactattataaacaaaaatttatatttaagatttatttaattaatgatgtatatga 26553678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 37491411 - 37491351
Alignment:
Q  59 tccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatg 119  Q
    ||||||||||| ||||| ||||| || |||||| ||||  ||||||| |||||||||||||    
T  37491411 tccagtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatg 37491351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 120290 - 120156
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| ||| ||| |||||| ||||||||||| |||||||    
T  120290 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtgatatacaataaataccacatacatcattaatt 120191  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||| |||||| |||||||||    
T  120190 gaatgtatctaaaaagtgaaattttgcttatatta 120156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 120140 - 120274
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||| ||||||||| ||||| ||| |||||||||||||| ||  || || |  | | ||||||||| |||||||    
T  120140 tacaccctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgtatgtggtatttattgtatatcacatacatcattaatt 120239  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||  | |||| |||||||||    
T  120240 gaatgtatctaaaaagtaaatttttgcttatatta 120274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 52817562 - 52817696
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||||| |||||| ||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||||||| ||||||||| |||||||    
T  52817562 tacaccctccggtcactgatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagatcacatacatcattaatt 52817661  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||||| |||| |||||||||    
T  52817662 gaatgtatctaaaaagtggatttttgcttatatta 52817696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 13689531 - 13689665
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||| ||||| ||||||||||||| |||||||  | |||| ||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  13689531 tacatcatccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagacaacatacattattaatt 13689630  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     |||| || ||||||||| | |||| |||||||||    
T  13689631 gaatgaatctaaaaagtgaatttttgcttatatta 13689665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 24941256 - 24941122
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| |||||| |||| | ||||||||||| ||| ||||| ||| |||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  24941256 tacaccctccggtcactgatatgagcaaaaattcaccttttagatacattcaattaatgatgtatttgatatataataaagaccacatacatcattaatt 24941157  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||||| | |||| |||||||||    
T  24941156 gaatgtatctaaaaagtgaatttttgcttatatta 24941122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 5418521 - 5418651
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||| | |||||||  | |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||    
T  5418521 gtcactaatatgagcaaaaatcaattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattcaatgtatcta 5418620  T
Q  163 aaaagtggaattttacttatattaatgatcg 193  Q
    ||||||  | |||| ||||||||| ||||||    
T  5418621 aaaagtaaatttttgcttatattagtgatcg 5418651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 10031652 - 10031567
Alignment:
Q  66 actaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||||| ||||||| | ||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||    
T  10031652 actaatataaacaaaaatccgctttttagatatatttaattaataatgtatgtgacatataataaagatcacatacatcattaatt 10031567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 5281196 - 5281264
Alignment:
Q  118 tgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||||||||||| ||||||||| ||||||| ||||||| ||||||||| | ||||||||||||||    
T  5281196 tgacatataataaagatcacatacatcattaattgaatgtatctaaaaagtgaatttttacttatatta 5281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 38539473 - 38539580
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| |||| |||||| ||||| |||||||| |  ||| | || |||| ||| ||||||||||||| |||||||||||||||||||||||  ||||||    
T  38539473 tacaccttccaatcactattataagcaaaaatttatattttaaatttattcaataaatgatgtatatggcatataataaagaccacatacatagttaatt 38539572  T
Q  152 aaatgtat 159  Q
     |||||||    
T  38539573 gaatgtat 38539580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 29006827 - 29006961
Alignment:
Q  49 aagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattatta 148  Q
    ||||||||||||| ||||||| ||||| |||||||  | |||| ||||  ||| ||| |||||||||| |||   || | | ||||||||||||| |||     
T  29006827 aagtacaccatccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcattt 29006926  T
Q  149 attaaatgtatttaaaaagtggaattttacttata 183  Q
    ||| |||| ||||||||||||||||||| ||||||    
T  29006927 attgaatgaatttaaaaagtggaattttgcttata 29006961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 44156145 - 44156083
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgt 114  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||    
T  44156145 tacaccctcctgtcactaatataagcaaaaattcactttttagatacattgaattaatgatgt 44156083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 24941117 - 24941170
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  24941117 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtat 24941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 3504072 - 3504136
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||| |||||||||||| |||||||||| |||| ||||  ||| ||||||||||||||    
T  3504072 tacaccatccaatcactaatataaacaaaaattcattttttagattcattcaattaatgatgtat 3504136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 5281280 - 5281216
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| |||||||||||||  |||||||||||||| ||||| ||| ||||||||||||||    
T  5281280 tacaccctccggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtat 5281216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 52817712 - 52817648
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||| ||| ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||||    
T  52817712 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtat 52817648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 29223951 - 29224014
Alignment:
Q  66 actaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataata 129  Q
    |||||||||| ||||||| || |||| ||||||||| |||||||||| ||| ||||||||||||    
T  29223951 actaatataagcaaaaatccattttttagatatattcaattaatgatatatgtgacatataata 29224014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 42013245 - 42013159
Alignment:
Q  98 tatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatt 185  Q
    |||| |||||||||||||| ||   ||||||| ||||||||||||| ||||||| |||| |||||||||||  || ||||||||||||    
T  42013245 tattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaatttaaaaagt-aaaatttacttatatt 42013159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 4406231 - 4406340
Alignment:
Q  47 ttaagtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattat 146  Q
    |||| |||||||||| ||||||| |||||  ||||||  || ||| |||| |||| | | |||||||||| ||   ||||||||||||||||||||| ||    
T  4406231 ttaaatacaccatccggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcat 4406330  T
Q  147 taattaaatg 156  Q
    ||||| ||||    
T  4406331 taattgaatg 4406340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 5418661 - 5418596
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||| |||  |||||||||||| |||||||| |||||| ||||| ||| ||||||||||||||    
T  5418661 gtacaccctccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtat 5418596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 20598252 - 20598365
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||||||| ||||| ||||||| ||||||||||  ||| ||||| ||| ||| ||||||||||||    || ||||||||||||||| || ||| |||    
T  20598252 tacaccatccggtcacaaatataagcaaaaattcatgttttagatacattcaataaatgatgtatattgtctacaataaagaccacatatatcatttatt 20598351  T
Q  152 aaatgtatttaaaa 165  Q
     |||| || |||||    
T  20598352 gaatgaatctaaaa 20598365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 19878286 - 19878394
Alignment:
Q  57 catccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||| |||||||||||| |||||||| || ||| ||||  ||| | | || ||||||| ||   ||||||||||| || |||||| ||||||||||||    
T  19878286 catccaatcactaatataagcaaaaattaacattttagattcattcattaaacgatgtatgtggactataataaagatcatatacatcattaattaaatg 19878385  T
Q  157 tatttaaaa 165  Q
     ||||||||    
T  19878386 aatttaaaa 19878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 44156061 - 44156129
Alignment:
Q  118 tgacatataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    ||||||||||| ||||| ||| |||| ||||||| ||||||| ||||||||| | |||| |||||||||    
T  44156061 tgacatataatgaagactacacacatcattaattcaatgtatctaaaaagtgaatttttgcttatatta 44156129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 55087776 - 55087840
Alignment:
Q  122 atataataaagaccacatacattattaattaaatgtatttaaaaagtggaattttacttatatta 186  Q
    |||||||||||||| ||||||| ||||||| ||||||| |||||| | || |||| |||||||||    
T  55087776 atataataaagaccgcatacatcattaattgaatgtatctaaaaattagatttttgcttatatta 55087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 4708577 - 4708644
Alignment:
Q  98 tatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaa 165  Q
    |||||| | |||||||||| ||   ||||||||||| || ||||||||||||||||||| ||||||||    
T  4708577 tatttattaaatgatgtatgtggtctataataaagatcatatacattattaattaaatgaatttaaaa 4708644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 8311316 - 8311378
Alignment:
Q  136 acatacattattaattaaatgtatttaaaaagtggaattttacttatattaatgatcgaaagg 198  Q
    ||||| |||||| ||| |||| ||||||||||| || |||| |||||| ||||||||||||||    
T  8311316 acataaattatttattgaatgaatttaaaaagttgatttttgcttataataatgatcgaaagg 8311378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 40881468 - 40881526
Alignment:
Q  98 tatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatg 156  Q
    |||||| | |||||||||| |||||||||||||||| || |||||| ||||||| ||||    
T  40881468 tatttattaaatgatgtatgtgacatataataaagatcatatacatcattaattgaatg 40881526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 55087858 - 55087792
Alignment:
Q  50 agtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    |||||||| ||| ||||||||||||| |||||||  | |||| ||||| ||| ||||||||||||||    
T  55087858 agtacaccctccggtcactaatataagcaaaaatctaatttttagatacattcaattaatgatgtat 55087792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 2404686 - 2404653
Alignment:
Q  123 tataataaagaccacatacattattaattaaatg 156  Q
    |||||||||||||||||||| |||||||||||||    
T  2404686 tataataaagaccacatacactattaattaaatg 2404653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 9993589 - 9993540
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatt 101  Q
    |||||| ||||||||||| ||||| ||||||||||||||| |||| ||||    
T  9993589 tacaccttccagtcactattataaacaaaaattcactttttagatttatt 9993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 13689670 - 13689617
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||||||||| ||||||||||||||| ||||  ||| ||||||| ||||||    
T  13689670 gtcactaatataagcaaaaattcactttttagattcattcaattaataatgtat 13689617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 13743952 - 13743887
Alignment:
Q  103 aattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||||| ||   |||||||  |||||||||||| |||||||||||| || ||||||||    
T  13743952 aattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaatctaaaaagt 13743887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 22720580 - 22720527
Alignment:
Q  123 tataataaagaccacatacattattaattaaatgtatttaaaaagtggaatttt 176  Q
    |||||||||||| | |||||||| | ||| ||||||| ||||||||||||||||    
T  22720580 tataataaagactagatacattaattattcaatgtatctaaaaagtggaatttt 22720527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 19934704 - 19934652
Alignment:
Q  131 agaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    ||||||||||||| ||| ||| |||| || |||||||||||||||| ||||||    
T  19934704 agaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttata 19934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 54164879 - 54164827
Alignment:
Q  131 agaccacatacattattaattaaatgtatttaaaaagtggaattttacttata 183  Q
    ||||||||||||| ||| ||| |||| || |||||||||||||||| ||||||    
T  54164879 agaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttata 54164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 4084 - 3961
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||| |||||| ||||| ||| ||| |||| ||||| |||||||||||||||||||||||||| ||||| | ||||||||||    
T  4084 gtcactaatataagcaaaaatttactttttagatacattcaataaatgttgtatgtgacatataataaagaccacatacatcattaaattaatgtattta 3985  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||| | |||| |||||||||    
T  3984 aaaagtgtatttttgcttatatta 3961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 3944 - 4009
Alignment:
Q  51 gtacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtat 116  Q
    ||||||| ||| ||||||||||||| ||||||| ||||||| | ||| ||| | ||||||||||||    
T  3944 gtacaccctccggtcactaatataagcaaaaatacactttttaaatacattaatttaatgatgtat 4009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 54383 - 54524
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| || |||||||||| |||||||  |||||| ||||| ||| |||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  54383 tacaccctccggttactaatataagcaaaaatctactttttagatacattcaattaatgatgtatatgatatataataaggaccacatacatcattaatt 54482  T
Q  152 aaatgtatttaaaaagtggaattttacttatattaatgatcg 193  Q
     ||||||| |||| |||| | |||| ||||||||| ||||||    
T  54483 gaatgtatctaaagagtgaatttttgcttatattagtgatcg 54524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 54533 - 54399
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    ||||||||||  |||||||||||| |||||||||||| || ||||| ||| |||||||||||||| ||     || || | | || |||||| |||||||    
T  54533 tacaccatccgatcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtggtccttattatatatcatatacatcattaatt 54434  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| |||||||| || |||| |||||||||    
T  54433 gaatgtatctaaaaagtagatttttgcttatatta 54399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 17162 - 17303
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||| ||||||||| | ||||||| |||||||||||||| ||||| |||||||| ||||| || || |||||||    
T  17162 tacaccctccggtcactaatataagcaaaa-ttcactttttatatatattcaattaatgatgtatgtgacacataataaaaaccacgtatatcattaatt 17260  T
Q  152 aaatgtatttaaaaagtgga-attttacttatattaatgatcg 193  Q
    |||||||||||||||||| |  |||| ||||||||| ||||||    
T  17261 aaatgtatttaaaaagtgaatttttttcttatattagtgatcg 17303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 246929 - 246806
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    |||| |||||||| |||||||  |||||| ||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||| ||    
T  246929 gtcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatctgacatataataaaaaccacatacatcattaattgaatgtatcta 246830  T
Q  163 aaaagtggaattttacttatatta 186  Q
    ||||||  | |||| |||||||||    
T  246829 aaaagtaaatttttgcttatatta 246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 246801 - 246928
Alignment:
Q  63 gtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtattta 162  Q
    ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| ||   | || || |   || |||||| ||||||| ||||||| ||    
T  246801 gtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtttttattatatgtcagatacatcattaattgaatgtatcta 246900  T
Q  163 aaaagtggaattttacttatattaatga 190  Q
    |||||| || |||| |||||||||||||    
T  246901 aaaagtagatttttgcttatattaatga 246928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 61158 - 61291
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| |  |||| ||||| ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  61158 tacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatcattaatt 61256  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||| ||||| ||||  ||||||||    
T  61257 gaatgtatctaaaatgtggatttttgtttatatta 61291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 61307 - 61174
Alignment:
Q  52 tacaccatccagtcactaatataaccaaaaattcacttttcagatatatttaattaatgatgtatatgacatataataaagaccacatacattattaatt 151  Q
    |||||| ||| ||||||||||||| ||||||| ||| ||| ||||| ||| |||||||||||||| || | | || || |   ||||||||| |||||||    
T  61307 tacaccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtggc-tttattatatgtcacatacatcattaatt 61209  T
Q  152 aaatgtatttaaaaagtggaattttacttatatta 186  Q
     ||||||| ||||||  ||| |||| |||||||||    
T  61208 gaatgtatctaaaaaagggatttttgcttatatta 61174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 5486 - 5417
Alignment:
Q  99 atttaattaatgatgtatatgacatataataaagaccacatacattattaattaaatgtatttaaaaagt 168  Q
    |||||||||||||||||| ||   ||||||| ||||||||||||| ||||||| |||| | |||||||||    
T  5486 atttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacttaaaaagt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 1112 - 1160
Alignment:
Q  107 aatgatgtatatgacatataataaagaccacatacattattaattaaat 155  Q
    |||||||||||||| ||||||||||||||  |||| |||||||||||||    
T  1112 aatgatgtatatgatatataataaagaccgtatacgttattaattaaat 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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