View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1904_high_21 (Length: 248)

Name: NF1904_high_21
Description: NF1904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1904_high_21
NF1904_high_21
[»] chr7 (61 HSPs)
chr7 (10-113)||(33377205-33377308)
chr7 (112-234)||(17896663-17896786)
chr7 (112-234)||(18470287-18470410)
chr7 (112-234)||(41675326-41675449)
chr7 (109-234)||(31430536-31430662)
chr7 (112-234)||(7477338-7477461)
chr7 (112-234)||(26632320-26632443)
chr7 (112-234)||(32528468-32528591)
chr7 (112-234)||(44480282-44480405)
chr7 (121-234)||(36922228-36922342)
chr7 (106-234)||(20035022-20035151)
chr7 (106-234)||(20045433-20045562)
chr7 (111-234)||(12838218-12838342)
chr7 (126-234)||(33173801-33173910)
chr7 (112-234)||(33099973-33100096)
chr7 (112-234)||(35112409-35112532)
chr7 (109-234)||(8264924-8265054)
chr7 (110-234)||(22950958-22951083)
chr7 (112-234)||(6799103-6799226)
chr7 (112-234)||(33921914-33922037)
chr7 (112-234)||(41889457-41889580)
chr7 (121-234)||(41891258-41891373)
chr7 (112-234)||(32966189-32966312)
chr7 (117-234)||(33257866-33257984)
chr7 (127-234)||(36406746-36406854)
chr7 (112-234)||(1553495-1553618)
chr7 (112-234)||(35746784-35746907)
chr7 (112-234)||(46285985-46286108)
chr7 (113-234)||(30866876-30866998)
chr7 (112-234)||(22382212-22382337)
chr7 (117-208)||(2408827-2408919)
chr7 (107-234)||(3837837-3837965)
chr7 (112-234)||(31399071-31399194)
chr7 (112-234)||(42842006-42842129)
chr7 (112-234)||(43874222-43874345)
chr7 (105-234)||(10227229-10227359)
chr7 (127-234)||(7312612-7312720)
chr7 (170-234)||(22057556-22057620)
chr7 (112-234)||(3310196-3310319)
chr7 (119-234)||(31815208-31815322)
chr7 (163-234)||(36648145-36648216)
chr7 (118-219)||(17354181-17354283)
chr7 (129-218)||(29497690-29497780)
chr7 (112-212)||(8966062-8966163)
chr7 (112-219)||(18194369-18194477)
chr7 (163-219)||(34368814-34368870)
chr7 (180-234)||(5732213-5732267)
chr7 (123-234)||(36298314-36298426)
chr7 (163-223)||(42880999-42881059)
chr7 (121-223)||(47459633-47459737)
chr7 (112-234)||(3177910-3178033)
chr7 (191-234)||(38168929-38168972)
chr7 (121-219)||(36339352-36339453)
chr7 (165-234)||(29722444-29722513)
chr7 (163-234)||(26723956-26724027)
chr7 (112-193)||(13431312-13431394)
chr7 (174-220)||(41409764-41409810)
chr7 (112-234)||(37354010-37354122)
chr7 (110-138)||(2271322-2271350)
chr7 (112-219)||(28608575-28608683)
chr7 (112-144)||(47408118-47408150)
[»] scaffold0040 (1 HSPs)
scaffold0040 (109-234)||(69077-69203)
[»] chr8 (92 HSPs)
chr8 (112-234)||(167614-167737)
chr8 (111-234)||(14263523-14263647)
chr8 (115-234)||(16701030-16701150)
chr8 (112-234)||(23429889-23430012)
chr8 (106-231)||(16656675-16656801)
chr8 (113-234)||(33935197-33935319)
chr8 (112-234)||(9954629-9954752)
chr8 (112-234)||(25812885-25813008)
chr8 (112-223)||(12248918-12249031)
chr8 (110-234)||(35052031-35052156)
chr8 (112-234)||(13327759-13327882)
chr8 (112-234)||(21651883-21652006)
chr8 (112-234)||(23848693-23848816)
chr8 (112-234)||(25703714-25703837)
chr8 (112-234)||(34046831-34046954)
chr8 (112-234)||(34981809-34981932)
chr8 (112-219)||(40521396-40521503)
chr8 (109-234)||(11993870-11993996)
chr8 (112-234)||(38482929-38483046)
chr8 (112-219)||(3720660-3720768)
chr8 (147-234)||(4057304-4057391)
chr8 (112-234)||(18291444-18291566)
chr8 (126-235)||(7606033-7606143)
chr8 (112-234)||(12763415-12763537)
chr8 (112-234)||(35051828-35051949)
chr8 (112-234)||(45281514-45281638)
chr8 (112-219)||(31028634-31028742)
chr8 (112-234)||(2335413-2335536)
chr8 (110-219)||(8672280-8672390)
chr8 (112-234)||(17718483-17718606)
chr8 (112-234)||(36058213-36058335)
chr8 (112-218)||(39303669-39303776)
chr8 (112-234)||(40603988-40604111)
chr8 (112-234)||(19972260-19972382)
chr8 (112-234)||(21020451-21020573)
chr8 (114-233)||(38128685-38128798)
chr8 (112-234)||(43553020-43553142)
chr8 (110-234)||(43553380-43553505)
chr8 (116-234)||(1245293-1245415)
chr8 (112-234)||(13173909-13174032)
chr8 (163-234)||(43642126-43642197)
chr8 (114-234)||(6750597-6750718)
chr8 (114-234)||(6757388-6757509)
chr8 (149-234)||(40228313-40228398)
chr8 (112-219)||(8730979-8731087)
chr8 (112-234)||(26062688-26062810)
chr8 (112-234)||(7483724-7483847)
chr8 (112-234)||(10180350-10180473)
chr8 (163-234)||(26740274-26740345)
chr8 (163-221)||(2456260-2456318)
chr8 (111-218)||(35028587-35028693)
chr8 (153-234)||(41305666-41305747)
chr8 (119-234)||(8453371-8453486)
chr8 (163-223)||(14228469-14228529)
chr8 (162-234)||(32010221-32010293)
chr8 (112-234)||(14061286-14061409)
chr8 (112-210)||(27518868-27518967)
chr8 (164-234)||(3513390-3513460)
chr8 (164-234)||(15647536-15647606)
chr8 (153-234)||(1202581-1202662)
chr8 (115-219)||(18842513-18842618)
chr8 (122-221)||(12342764-12342864)
chr8 (111-222)||(13935225-13935337)
chr8 (112-219)||(15596324-15596432)
chr8 (112-234)||(33314523-33314647)
chr8 (127-234)||(10086292-10086398)
chr8 (163-234)||(11707622-11707693)
chr8 (163-234)||(35498207-35498278)
chr8 (164-234)||(15623748-15623818)
chr8 (112-234)||(38221793-38221915)
chr8 (112-223)||(8554163-8554276)
chr8 (126-234)||(23793412-23793521)
chr8 (165-218)||(27911825-27911878)
chr8 (165-218)||(27958244-27958297)
chr8 (111-219)||(29125881-29125990)
chr8 (126-234)||(35296038-35296147)
chr8 (163-234)||(9808111-9808182)
chr8 (165-212)||(41890556-41890603)
chr8 (153-219)||(41701634-41701700)
chr8 (119-232)||(43553590-43553704)
chr8 (112-209)||(45317632-45317730)
chr8 (112-223)||(8954847-8954959)
chr8 (126-234)||(14511567-14511684)
chr8 (112-223)||(17074729-17074840)
chr8 (112-223)||(17573430-17573541)
chr8 (112-219)||(2888619-2888728)
chr8 (165-234)||(13132253-13132322)
chr8 (146-199)||(28206570-28206623)
chr8 (117-209)||(38074261-38074354)
chr8 (165-209)||(9301705-9301749)
chr8 (170-214)||(9687667-9687711)
chr8 (165-209)||(11163300-11163344)
[»] chr4 (101 HSPs)
chr4 (112-234)||(12252083-12252206)
chr4 (112-234)||(19527346-19527469)
chr4 (112-234)||(3436205-3436328)
chr4 (112-234)||(5374488-5374611)
chr4 (112-234)||(32239383-32239506)
chr4 (112-234)||(52677283-52677406)
chr4 (112-234)||(56576241-56576364)
chr4 (109-234)||(53599924-53600050)
chr4 (112-234)||(13629331-13629454)
chr4 (112-234)||(19093291-19093414)
chr4 (112-234)||(21044885-21045008)
chr4 (112-234)||(26620489-26620612)
chr4 (114-220)||(27492344-27492451)
chr4 (112-234)||(29295337-29295460)
chr4 (112-234)||(31862124-31862247)
chr4 (112-234)||(38617445-38617568)
chr4 (112-234)||(48782183-48782306)
chr4 (103-234)||(22678447-22678580)
chr4 (112-232)||(33084461-33084582)
chr4 (111-234)||(44014051-44014175)
chr4 (112-233)||(16464921-16465043)
chr4 (112-231)||(33755223-33755343)
chr4 (115-223)||(23623644-23623753)
chr4 (106-234)||(46871898-46872027)
chr4 (119-234)||(42513164-42513280)
chr4 (112-234)||(4201456-4201579)
chr4 (112-234)||(16664224-16664347)
chr4 (112-234)||(34464260-34464383)
chr4 (112-234)||(44069014-44069137)
chr4 (112-234)||(44217689-44217812)
chr4 (112-234)||(47428512-47428635)
chr4 (111-234)||(8741762-8741886)
chr4 (112-234)||(50623397-50623520)
chr4 (112-234)||(41414991-41415113)
chr4 (153-234)||(55147199-55147280)
chr4 (127-234)||(353964-354072)
chr4 (111-234)||(9834246-9834370)
chr4 (112-219)||(30939138-30939246)
chr4 (112-219)||(33809070-33809178)
chr4 (112-219)||(36750160-36750268)
chr4 (107-234)||(47093790-47093918)
chr4 (112-234)||(35232436-35232558)
chr4 (112-234)||(36408706-36408829)
chr4 (112-234)||(36422872-36422995)
chr4 (112-234)||(39683852-39683975)
chr4 (112-234)||(35381553-35381675)
chr4 (153-234)||(6195049-6195130)
chr4 (117-220)||(23719936-23720040)
chr4 (127-234)||(8735388-8735495)
chr4 (112-234)||(39671308-39671431)
chr4 (112-234)||(42133020-42133143)
chr4 (105-234)||(29833064-29833194)
chr4 (112-234)||(37502004-37502128)
chr4 (127-234)||(52057589-52057699)
chr4 (112-234)||(9220179-9220302)
chr4 (112-234)||(26933909-26934032)
chr4 (112-234)||(47251396-47251519)
chr4 (112-234)||(52257929-52258051)
chr4 (112-234)||(55935090-55935213)
chr4 (149-234)||(26906527-26906612)
chr4 (112-204)||(34361039-34361132)
chr4 (149-234)||(35231711-35231796)
chr4 (149-234)||(38542414-38542499)
chr4 (163-234)||(18781514-18781585)
chr4 (112-234)||(22828539-22828662)
chr4 (115-220)||(37987536-37987647)
chr4 (110-219)||(18135203-18135313)
chr4 (110-219)||(49122413-49122523)
chr4 (118-219)||(53691807-53691909)
chr4 (153-234)||(30151697-30151778)
chr4 (112-234)||(51347240-51347368)
chr4 (162-234)||(19399568-19399639)
chr4 (119-234)||(36750539-36750655)
chr4 (163-234)||(31369836-31369907)
chr4 (163-234)||(41955812-41955883)
chr4 (163-234)||(45725571-45725642)
chr4 (117-219)||(47596766-47596869)
chr4 (168-234)||(23237667-23237733)
chr4 (163-233)||(37394298-37394368)
chr4 (109-234)||(40411924-40412049)
chr4 (153-234)||(36659565-36659646)
chr4 (119-223)||(38617806-38617911)
chr4 (112-212)||(41813625-41813726)
chr4 (153-234)||(44549668-44549749)
chr4 (109-204)||(47751517-47751612)
chr4 (112-234)||(43887966-43888088)
chr4 (164-234)||(54231574-54231645)
chr4 (112-209)||(34603607-34603705)
chr4 (19-74)||(16512761-16512816)
chr4 (112-207)||(37551830-37551926)
chr4 (163-234)||(3036420-3036491)
chr4 (112-202)||(17698551-17698642)
chr4 (165-212)||(54029135-54029182)
chr4 (112-193)||(19740718-19740800)
chr4 (200-234)||(33755167-33755201)
chr4 (165-223)||(39308968-39309026)
chr4 (112-208)||(27918585-27918682)
chr4 (165-209)||(6150731-6150775)
chr4 (112-144)||(20294267-20294299)
chr4 (111-198)||(42645290-42645377)
chr4 (112-219)||(48510022-48510130)
[»] chr3 (83 HSPs)
chr3 (112-234)||(51244604-51244727)
chr3 (112-234)||(54106243-54106366)
chr3 (112-234)||(13167996-13168120)
chr3 (106-234)||(790524-790653)
chr3 (112-232)||(53745426-53745547)
chr3 (112-234)||(43554370-43554493)
chr3 (112-234)||(54898229-54898352)
chr3 (117-234)||(27483929-27484047)
chr3 (110-234)||(48214045-48214170)
chr3 (112-234)||(20105172-20105295)
chr3 (112-234)||(28885658-28885781)
chr3 (113-234)||(48151966-48152088)
chr3 (112-232)||(36234347-36234468)
chr3 (112-234)||(17102734-17102857)
chr3 (112-234)||(42672033-42672156)
chr3 (112-234)||(47104298-47104421)
chr3 (112-234)||(39866992-39867114)
chr3 (119-234)||(33491282-33491398)
chr3 (112-223)||(44092183-44092295)
chr3 (112-234)||(46973400-46973526)
chr3 (112-234)||(3376451-3376574)
chr3 (112-234)||(7328435-7328558)
chr3 (112-234)||(47070000-47070123)
chr3 (113-234)||(43775533-43775655)
chr3 (110-234)||(45513758-45513883)
chr3 (112-219)||(20848877-20848985)
chr3 (112-234)||(29697971-29698094)
chr3 (153-223)||(45145151-45145221)
chr3 (149-234)||(45101501-45101586)
chr3 (153-234)||(51219227-51219308)
chr3 (103-234)||(44544312-44544444)
chr3 (112-234)||(52627380-52627504)
chr3 (119-234)||(13158582-13158700)
chr3 (112-234)||(19550226-19550349)
chr3 (112-234)||(34266581-34266704)
chr3 (112-234)||(41168741-41168864)
chr3 (117-234)||(50091930-50092048)
chr3 (119-234)||(55141619-55141732)
chr3 (107-234)||(33874689-33874817)
chr3 (171-234)||(25983805-25983868)
chr3 (117-219)||(27039764-27039867)
chr3 (112-221)||(41351350-41351461)
chr3 (112-221)||(52175698-52175810)
chr3 (110-234)||(51064861-51064986)
chr3 (112-219)||(52173726-52173835)
chr3 (119-234)||(11473389-11473505)
chr3 (127-234)||(29651667-29651771)
chr3 (163-234)||(51697707-51697778)
chr3 (112-234)||(52663422-52663545)
chr3 (112-219)||(2154197-2154310)
chr3 (117-234)||(5244078-5244196)
chr3 (165-221)||(24220-24276)
chr3 (123-234)||(35315123-35315235)
chr3 (126-234)||(3643339-3643448)
chr3 (112-234)||(32854091-32854213)
chr3 (163-234)||(54334326-54334397)
chr3 (180-234)||(27992289-27992343)
chr3 (129-234)||(40010807-40010913)
chr3 (127-234)||(41926671-41926780)
chr3 (112-212)||(23771267-23771368)
chr3 (127-234)||(30861685-30861793)
chr3 (163-211)||(42515338-42515386)
chr3 (110-209)||(47844006-47844106)
chr3 (165-212)||(2642744-2642791)
chr3 (163-234)||(27028158-27028229)
chr3 (112-234)||(32980620-32980743)
chr3 (113-234)||(22099967-22100089)
chr3 (109-234)||(24981272-24981393)
chr3 (127-204)||(29803630-29803708)
chr3 (109-234)||(35077364-35077490)
chr3 (163-221)||(42634503-42634561)
chr3 (108-219)||(26748329-26748441)
chr3 (198-234)||(29803727-29803763)
chr3 (163-219)||(43159918-43159974)
chr3 (112-221)||(45055167-45055277)
chr3 (163-219)||(54911459-54911515)
chr3 (163-234)||(6902310-6902381)
chr3 (154-209)||(40113415-40113470)
chr3 (163-234)||(49168396-49168467)
chr3 (112-219)||(41425609-41425718)
chr3 (165-209)||(28226461-28226505)
chr3 (112-219)||(33074435-33074543)
chr3 (194-234)||(43945442-43945482)
[»] chr1 (80 HSPs)
chr1 (112-234)||(35531429-35531552)
chr1 (112-234)||(49908316-49908439)
chr1 (112-234)||(21927830-21927953)
chr1 (112-234)||(50825706-50825829)
chr1 (109-234)||(28678998-28679124)
chr1 (112-234)||(10675882-10676005)
chr1 (112-234)||(37609435-37609558)
chr1 (112-234)||(32994603-32994730)
chr1 (112-234)||(1429264-1429387)
chr1 (112-234)||(31588873-31588996)
chr1 (112-232)||(8464585-8464706)
chr1 (110-234)||(9361951-9362076)
chr1 (126-234)||(43500500-43500609)
chr1 (127-234)||(35483913-35484021)
chr1 (112-234)||(13507750-13507873)
chr1 (112-234)||(13514938-13515061)
chr1 (112-234)||(30686391-30686514)
chr1 (112-234)||(38648437-38648560)
chr1 (112-234)||(44182740-44182863)
chr1 (112-234)||(52748997-52749120)
chr1 (117-234)||(32347963-32348081)
chr1 (117-234)||(43952773-43952891)
chr1 (117-234)||(45226711-45226829)
chr1 (115-230)||(19093251-19093367)
chr1 (111-234)||(20605758-20605882)
chr1 (119-234)||(35255473-35255589)
chr1 (112-234)||(15660567-15660690)
chr1 (112-234)||(18344306-18344429)
chr1 (112-234)||(19929600-19929723)
chr1 (112-234)||(35700509-35700632)
chr1 (112-234)||(1427660-1427782)
chr1 (112-234)||(19455533-19455655)
chr1 (118-234)||(44818440-44818557)
chr1 (112-223)||(13566656-13566768)
chr1 (115-234)||(19349513-19349633)
chr1 (112-234)||(18033960-18034083)
chr1 (112-234)||(31570771-31570894)
chr1 (111-228)||(35605437-35605555)
chr1 (110-223)||(51974316-51974430)
chr1 (126-234)||(7782945-7783054)
chr1 (112-219)||(1039516-1039624)
chr1 (112-219)||(1046422-1046530)
chr1 (127-234)||(49497147-49497255)
chr1 (112-219)||(51613391-51613499)
chr1 (112-234)||(13699154-13699277)
chr1 (112-234)||(32168446-32168569)
chr1 (112-234)||(36318333-36318456)
chr1 (112-234)||(45368068-45368191)
chr1 (120-223)||(1038071-1038176)
chr1 (120-223)||(1044977-1045082)
chr1 (153-234)||(37437187-37437268)
chr1 (112-219)||(37735288-37735396)
chr1 (116-234)||(52649863-52649982)
chr1 (112-234)||(1024536-1024659)
chr1 (112-234)||(10506793-10506916)
chr1 (110-234)||(38597568-38597694)
chr1 (153-234)||(30702424-30702505)
chr1 (111-234)||(37296859-37296983)
chr1 (163-234)||(17013454-17013525)
chr1 (112-234)||(51972415-51972538)
chr1 (117-218)||(3684777-3684876)
chr1 (153-219)||(4101058-4101124)
chr1 (115-223)||(42800091-42800199)
chr1 (163-219)||(8008318-8008374)
chr1 (120-214)||(12721428-12721523)
chr1 (163-234)||(38818059-38818130)
chr1 (126-223)||(9127661-9127759)
chr1 (164-234)||(12124677-12124747)
chr1 (185-234)||(24781868-24781917)
chr1 (126-234)||(43808892-43809002)
chr1 (173-234)||(42787420-42787481)
chr1 (112-219)||(40926892-40927000)
chr1 (195-234)||(1677262-1677301)
chr1 (195-234)||(12231205-12231244)
chr1 (163-231)||(46096581-46096646)
chr1 (163-228)||(5597855-5597920)
chr1 (112-219)||(48508113-48508222)
chr1 (112-144)||(1677196-1677228)
chr1 (117-192)||(48174848-48174924)
chr1 (165-209)||(52825311-52825355)
[»] scaffold0002 (2 HSPs)
scaffold0002 (112-234)||(138868-138992)
scaffold0002 (119-234)||(148288-148406)
[»] chr5 (91 HSPs)
chr5 (112-234)||(6072414-6072537)
chr5 (110-234)||(4175614-4175739)
chr5 (118-234)||(4688932-4689048)
chr5 (112-234)||(12664820-12664943)
chr5 (112-234)||(42911512-42911635)
chr5 (122-234)||(4017386-4017499)
chr5 (112-234)||(18465663-18465786)
chr5 (112-234)||(26854228-26854351)
chr5 (119-234)||(31802758-31802873)
chr5 (112-234)||(38910236-38910359)
chr5 (112-234)||(39073006-39073129)
chr5 (114-218)||(10889244-10889349)
chr5 (112-234)||(7403816-7403937)
chr5 (112-234)||(7579802-7579925)
chr5 (112-234)||(18794745-18794868)
chr5 (112-234)||(28024393-28024516)
chr5 (112-234)||(28463519-28463642)
chr5 (112-234)||(37306833-37306955)
chr5 (112-234)||(38297750-38297874)
chr5 (119-234)||(2134040-2134156)
chr5 (115-234)||(4098296-4098416)
chr5 (112-234)||(1297872-1297995)
chr5 (112-234)||(1795251-1795374)
chr5 (112-218)||(38363153-38363260)
chr5 (109-234)||(32440046-32440172)
chr5 (111-234)||(9127485-9127609)
chr5 (111-234)||(10359369-10359493)
chr5 (112-219)||(12784591-12784699)
chr5 (127-234)||(34261289-34261397)
chr5 (112-223)||(38502945-38503057)
chr5 (155-234)||(1088067-1088146)
chr5 (112-234)||(4427540-4427663)
chr5 (112-234)||(8825019-8825142)
chr5 (112-234)||(18437457-18437580)
chr5 (112-234)||(38702103-38702226)
chr5 (112-210)||(42394286-42394385)
chr5 (117-234)||(25027858-25027976)
chr5 (149-234)||(9076071-9076156)
chr5 (138-234)||(18020902-18020999)
chr5 (153-234)||(38017411-38017492)
chr5 (112-223)||(9959022-9959134)
chr5 (127-234)||(12870033-12870141)
chr5 (166-233)||(2674113-2674180)
chr5 (112-234)||(8229937-8230060)
chr5 (112-234)||(21606392-21606515)
chr5 (112-234)||(25343922-25344045)
chr5 (112-234)||(38297936-38298056)
chr5 (112-234)||(40198750-40198873)
chr5 (112-234)||(40209102-40209225)
chr5 (112-219)||(12723108-12723216)
chr5 (112-223)||(28447129-28447241)
chr5 (158-234)||(32388995-32389071)
chr5 (112-234)||(4694726-4694849)
chr5 (112-218)||(6007845-6007952)
chr5 (109-219)||(19831689-19831800)
chr5 (112-234)||(24469771-24469893)
chr5 (112-234)||(31803286-31803409)
chr5 (112-234)||(4985309-4985431)
chr5 (154-219)||(39893958-39894023)
chr5 (163-234)||(4962320-4962391)
chr5 (112-234)||(5144132-5144255)
chr5 (163-234)||(14793924-14793995)
chr5 (163-234)||(16124394-16124465)
chr5 (128-234)||(26906470-26906577)
chr5 (163-234)||(37303241-37303312)
chr5 (109-214)||(425088-425194)
chr5 (164-234)||(6689614-6689684)
chr5 (112-223)||(7735228-7735341)
chr5 (153-223)||(38160296-38160366)
chr5 (112-219)||(3686356-3686464)
chr5 (117-212)||(21157600-21157696)
chr5 (112-219)||(24074987-24075095)
chr5 (112-219)||(37809721-37809829)
chr5 (163-234)||(5119192-5119263)
chr5 (118-234)||(6754313-6754427)
chr5 (163-234)||(36239472-36239543)
chr5 (112-219)||(30368263-30368372)
chr5 (163-219)||(7408345-7408401)
chr5 (120-219)||(12638089-12638189)
chr5 (117-212)||(21150459-21150555)
chr5 (112-234)||(31985184-31985307)
chr5 (112-217)||(5843144-5843250)
chr5 (111-223)||(18676560-18676671)
chr5 (165-219)||(37633692-37633746)
chr5 (163-219)||(13461024-13461080)
chr5 (163-234)||(24228962-24229033)
chr5 (165-211)||(11413687-11413733)
chr5 (112-209)||(13957319-13957417)
chr5 (112-209)||(25785869-25785967)
chr5 (175-219)||(13703123-13703167)
chr5 (165-209)||(18393130-18393174)
[»] chr2 (54 HSPs)
chr2 (127-234)||(9706783-9706890)
chr2 (112-234)||(10812179-10812302)
chr2 (111-234)||(11222456-11222580)
chr2 (112-234)||(14295897-14296020)
chr2 (112-234)||(26342560-26342683)
chr2 (112-233)||(34357158-34357280)
chr2 (132-234)||(3363584-3363687)
chr2 (112-234)||(11560187-11560310)
chr2 (112-234)||(28145712-28145835)
chr2 (112-234)||(36404982-36405105)
chr2 (114-234)||(479113-479235)
chr2 (114-234)||(25558324-25558444)
chr2 (112-219)||(13849870-13849978)
chr2 (111-234)||(15893720-15893844)
chr2 (112-223)||(35158502-35158614)
chr2 (112-234)||(14541311-14541434)
chr2 (112-234)||(41885605-41885728)
chr2 (121-234)||(30264742-30264856)
chr2 (117-234)||(37093435-37093553)
chr2 (112-234)||(14288411-14288534)
chr2 (112-234)||(15677431-15677554)
chr2 (112-234)||(34399182-34399305)
chr2 (111-234)||(19594330-19594453)
chr2 (112-234)||(13753935-13754058)
chr2 (112-234)||(13965587-13965710)
chr2 (112-234)||(15183141-15183264)
chr2 (112-234)||(43077272-43077395)
chr2 (130-234)||(4883601-4883706)
chr2 (110-234)||(32674189-32674314)
chr2 (112-221)||(34309203-34309312)
chr2 (119-234)||(2012848-2012964)
chr2 (112-219)||(32854935-32855043)
chr2 (112-234)||(13215373-13215496)
chr2 (112-234)||(14284108-14284231)
chr2 (155-234)||(38186192-38186271)
chr2 (163-228)||(10263788-10263853)
chr2 (111-234)||(4654698-4654822)
chr2 (112-219)||(9369954-9370062)
chr2 (119-234)||(38072366-38072482)
chr2 (112-219)||(29041932-29042038)
chr2 (112-234)||(31025080-31025203)
chr2 (153-219)||(25187282-25187348)
chr2 (112-234)||(1395544-1395667)
chr2 (153-234)||(6013497-6013578)
chr2 (153-234)||(32543927-32544008)
chr2 (120-216)||(36375559-36375656)
chr2 (112-219)||(34884693-34884801)
chr2 (108-234)||(13001051-13001178)
chr2 (127-234)||(8443686-8443794)
chr2 (163-215)||(37116752-37116804)
chr2 (112-202)||(4952860-4952950)
chr2 (165-212)||(30544554-30544601)
chr2 (163-217)||(44360466-44360520)
chr2 (117-209)||(37660129-37660222)
[»] scaffold0014 (1 HSPs)
scaffold0014 (112-228)||(195882-195999)
[»] chr6 (49 HSPs)
chr6 (112-234)||(30388701-30388824)
chr6 (112-220)||(3849045-3849154)
chr6 (112-234)||(17193138-17193261)
chr6 (112-234)||(26470861-26470984)
chr6 (110-239)||(22400697-22400827)
chr6 (112-234)||(1751569-1751692)
chr6 (112-234)||(9838260-9838383)
chr6 (112-234)||(34607078-34607201)
chr6 (110-234)||(27313478-27313603)
chr6 (112-234)||(8992528-8992651)
chr6 (112-234)||(9016975-9017098)
chr6 (112-234)||(17835873-17835996)
chr6 (109-223)||(23777273-23777388)
chr6 (112-234)||(24663359-24663482)
chr6 (118-234)||(17124121-17124239)
chr6 (112-218)||(373703-373810)
chr6 (112-234)||(22784806-22784929)
chr6 (112-234)||(23923851-23923974)
chr6 (112-234)||(24356192-24356315)
chr6 (112-234)||(31854629-31854752)
chr6 (20-102)||(19755330-19755412)
chr6 (126-234)||(3621584-3621693)
chr6 (116-234)||(17251394-17251513)
chr6 (112-234)||(34378839-34378962)
chr6 (112-234)||(12732157-12732278)
chr6 (161-234)||(11431295-11431368)
chr6 (112-234)||(34730540-34730663)
chr6 (164-234)||(7632175-7632245)
chr6 (153-219)||(33260722-33260788)
chr6 (128-234)||(7235435-7235543)
chr6 (112-234)||(8176416-8176536)
chr6 (112-234)||(24635688-24635811)
chr6 (163-234)||(30237010-30237081)
chr6 (119-218)||(364696-364797)
chr6 (111-219)||(11676766-11676873)
chr6 (163-235)||(30416212-30416284)
chr6 (112-234)||(32359576-32359695)
chr6 (163-234)||(52695-52766)
chr6 (113-228)||(1252147-1252262)
chr6 (163-219)||(7170184-7170240)
chr6 (163-234)||(31244887-31244958)
chr6 (163-217)||(22050081-22050135)
chr6 (112-219)||(17601292-17601401)
chr6 (112-219)||(2381162-2381270)
chr6 (112-198)||(19645846-19645933)
chr6 (180-234)||(1249588-1249642)
chr6 (169-234)||(7056278-7056343)
chr6 (165-234)||(19811990-19812059)
chr6 (163-219)||(24948275-24948331)
[»] scaffold1213 (1 HSPs)
scaffold1213 (112-234)||(105-232)
[»] scaffold0024 (1 HSPs)
scaffold0024 (112-234)||(49127-49250)
[»] scaffold0019 (1 HSPs)
scaffold0019 (112-234)||(72085-72208)
[»] scaffold0172 (1 HSPs)
scaffold0172 (119-234)||(26265-26381)
[»] scaffold0009 (1 HSPs)
scaffold0009 (114-234)||(147266-147387)
[»] scaffold0831 (1 HSPs)
scaffold0831 (163-234)||(2839-2910)
[»] scaffold0192 (1 HSPs)
scaffold0192 (112-234)||(14859-14982)
[»] scaffold0325 (1 HSPs)
scaffold0325 (112-219)||(295-403)
[»] scaffold0018 (1 HSPs)
scaffold0018 (112-234)||(184265-184388)
[»] scaffold0007 (1 HSPs)
scaffold0007 (163-234)||(77120-77191)
[»] scaffold0280 (1 HSPs)
scaffold0280 (130-234)||(8152-8257)
[»] scaffold0274 (1 HSPs)
scaffold0274 (112-234)||(377-500)
[»] scaffold0135 (1 HSPs)
scaffold0135 (112-234)||(30830-30953)
[»] scaffold0343 (1 HSPs)
scaffold0343 (153-234)||(7446-7527)
[»] scaffold1254 (1 HSPs)
scaffold1254 (163-234)||(1065-1136)
[»] scaffold0419 (1 HSPs)
scaffold0419 (163-234)||(6493-6564)
[»] scaffold0886 (1 HSPs)
scaffold0886 (153-210)||(4538-4595)
[»] scaffold0036 (1 HSPs)
scaffold0036 (110-234)||(23114-23239)
[»] scaffold2146 (1 HSPs)
scaffold2146 (180-234)||(601-655)
[»] scaffold0006 (1 HSPs)
scaffold0006 (165-209)||(96224-96268)
[»] scaffold0001 (1 HSPs)
scaffold0001 (170-234)||(419630-419694)


Alignment Details
Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 33377308 - 33377205
Alignment:
Q  10 caataagatggaatgaaagattaatagttgaaaaatgtaataggatgataaatataattgtcaaatattgaaaaatgccatggcatccaaccaactaata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33377308 caataagatggaatgaaagattaatagttgaaaaatgtaataggatgataaatataattgtcaaatattgaaaaatgccttggcatccaaccaactaata 33377209  T
Q  110 agta 113  Q
    ||||    
T  33377208 agta 33377205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 17896786 - 17896663
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  17896786 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgttgtttta 17896687  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  17896686 ccaatattgtccttagttatttat 17896663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18470287 - 18470410
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  18470287 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 18470386  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  18470387 ccaatattatccttagttatttat 18470410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 41675449 - 41675326
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| |||||  ||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  41675449 tactccctccgttcctttttaagtgtcacttttgcagaaaatttttgttcttgtttaactgtcactttcaaagttcaatgtaacattaaatgttgtttta 41675350  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  41675349 ccaatattatccttagttatttat 41675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 31430536 - 31430662
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||||||||    
T  31430536 aagtactccctccgttcctttttaagtgtcacttttgtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtt 31430635  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||||||| |||| ||||||||||    
T  31430636 ttaccaatattgtccttagttatttat 31430662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 7477461 - 7477338
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||||||||||||| ||||| ||||||||||| ||||  |||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  7477461 tactccctcagttcctttttaagtgtctcttttgaagaaaatttttgttcctatttaactgttactttcaaagttcaatgcaatattaaatgttgtttta 7477362  T
Q  211 ccaatattatcctcagttatttat 234  Q
    || |||||||||| ||||||||||    
T  7477361 ccgatattatccttagttatttat 7477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 26632443 - 26632320
Alignment:
Q  112 tactccctccgttt-ctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||  ||  |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  26632443 tactccctccgttttctttttaagtgtcacttttggagaaaatttttatcctatttaactgtcactttcaaagttcaatgcaacattaaatgttatttta 26632344  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  26632343 ccaatattatccttagttatttat 26632320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32528591 - 32528468
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||  ||||||||||| |||||| ||||||||||| ||||  |||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  32528591 tactctctccgttcttttttaagtgttacttttgaagaaaatttttgttcctatttaactgtcactttcaaagttcaatgaaatattaaatgttgtttta 32528492  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  32528491 ccaatattatccttagttatttat 32528468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 44480405 - 44480282
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| ||||| |||||||  |||||||| ||||||| |||||||||||||| |||||||| |||||||||| |||||    
T  44480405 tactccctccgttcctttttaagtgtctcttttgaagaaaaaatttgttcttatttaaccgtcacttttaaagttcaatgcaacattaaatgttatttta 44480306  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  44480305 tcaatattatccttagttatttat 44480282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 36922228 - 36922342
Alignment:
Q  121 cgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||| |||||||||||||||||||  ||||||||||  | || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36922228 cgttcctttttaagtgtcacttttagagaaaatttttatttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatatta 36922327  T
Q  220 tcctcagttatttat 234  Q
    |||| ||||||||||    
T  36922328 tccttagttatttat 36922342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 234
Target Start/End: Original strand, 20035022 - 20035151
Alignment:
Q  106 aataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||| |||||| |||||| |||||||||||||||||||  ||||| |||| ||||  ||||||||| |||||| ||||| |||||||| ||||||||||    
T  20035022 aataaatactccatccgttcctttttaagtgtcacttttgcagaaattttttgttcctatttaactggcactttcaaagttcaatgcaacattaaatgtt 20035121  T
Q  205 gttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||| ||||||||||    
T  20035122 gttttaccaatattatccttagttatttat 20035151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 234
Target Start/End: Original strand, 20045433 - 20045562
Alignment:
Q  106 aataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||| |||||| |||||| |||||||||||||||||||  ||||| |||| ||||  ||||||||| |||||| ||||| |||||||| ||||||||||    
T  20045433 aataaatactccatccgttcctttttaagtgtcacttttgcagaaattttttgttcctatttaactggcactttcaaagttcaatgcaacattaaatgtt 20045532  T
Q  205 gttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||| ||||||||||    
T  20045533 gttttaccaatattatccttagttatttat 20045562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 12838342 - 12838218
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||||||||||||||  |||||| |||||||   |||||||||||||||| ||||| || ||||| |||||||||||||||    
T  12838342 gtactccctccgttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagttcagtgcaacattaaatgttgtttt 12838243  T
Q  210 accaatattatcctcagttatttat 234  Q
     ||||||||||||| ||||||||||    
T  12838242 gccaatattatccttagttatttat 12838218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 33173801 - 33173910
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||     
T  33173801 ctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatcctt 33173900  T
Q  225 agttatttat 234  Q
    ||||||||||    
T  33173901 agttatttat 33173910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 33100096 - 33099973
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  33100096 tactccctccgttcttttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatcttgtttta 33099997  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  33099996 ccaatattgtccttagttatttat 33099973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 35112409 - 35112532
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| |||||||   |||||||||||||||| ||||| || ||||| ||||||| ||||||||    
T  35112409 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactgtcactttcaaagttcattgcaacattaaatattgtttta 35112508  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| ||||||||||    
T  35112509 ccaatattacccttagttatttat 35112532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 8264924 - 8265054
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaat----attaaatgt 203  Q
    ||||||||| |||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| ||||||||     |||||||||    
T  8264924 aagtactccttccgttcctttttaagtgtcacttttagagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaaccaacattaaatgt 8265023  T
Q  204 tgttttaccaatattatcctcagttatttat 234  Q
    |||||||| ||||||||||| ||||||||||    
T  8265024 tgttttactaatattatccttagttatttat 8265054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 22951083 - 22950958
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||||||||  || ||||||||||||||||||| |||||||||||  | || |||||||||||||||| ||| | |||||||| ||||||||| ||||    
T  22951083 agtactccctctcttcctttttaagtgtcacttttgaagaaaatttttgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgtagttt 22950984  T
Q  209 taccaatattatcctcagttatttat 234  Q
    |||||||||| |||| ||||||||||    
T  22950983 taccaatattctccttagttatttat 22950958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 6799103 - 6799226
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| ||  ||||||||||||  ||||  ||||| |||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  6799103 tactccctccattcatttttaagtgtctgttttggagaaattttttgttctcatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 6799202  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| | ||||||||    
T  6799203 tcaatattatccttaattatttat 6799226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 33922037 - 33921914
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattt-tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| |||  |||||||||||| ||||| |||||||||| |||||  |||||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  33922037 tactccctcagttcatttttaagtgtctcttttgaagaaaatttgtgttcctatttaactgtcactttcaaagttcaatgcaacattgaatgttgtttta 33921938  T
Q  211 ccaatattatcctcagttatttat 234  Q
    || |||||||||| | ||||||||    
T  33921937 ccgatattatccttaattatttat 33921914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 41889580 - 41889457
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||||||||||||||||||||||| |||||  |||| ||||  |||||||||||| ||||||||| ||||||||  |||||| ||||||||    
T  41889580 tactccatccgtttctttttaagtgtcacttttaaagaatttttttgttccaatttaactgtcatttttaaagttcaatgcaactttaaatattgtttta 41889481  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||||| || ||||||||||    
T  41889480 tcaatattattcttagttatttat 41889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 41891258 - 41891373
Alignment:
Q  121 cgtttctttttaagtgtcacttttcaagaaaat--tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    |||| |||||||||||||||||||  ||||||   |||||||  |||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||    
T  41891258 cgttcctttttaagtgtcacttttggagaaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattgaatgttgttttaccaatatt 41891357  T
Q  219 atcctcagttatttat 234  Q
     |||| ||||||||||    
T  41891358 gtcctgagttatttat 41891373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32966312 - 32966189
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  |||  |||||||||||| ||| |||||  ||||||| ||||||||||| ||||    
T  32966312 tactccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaactgtcattttcaaagttaaatgcaacattaaatgttggttta 32966213  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  32966212 ccaatattgtccttagttatttat 32966189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 33257866 - 33257984
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||| ||| |||||||||||||||||||  |||||| |||||||   |||||||| ||||||| ||||| |||||||| |||||||||||||||||||||    
T  33257866 cctcagttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactatcactttcaaagttcaatgcaacattaaatgttgttttaccaat 33257965  T
Q  216 attatcctcagttatttat 234  Q
    |||| |||  |||||||||    
T  33257966 attacccttggttatttat 33257984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 36406746 - 36406854
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    |||||||||||||||||| |||||| |||| ||||| |||||||||| ||||| ||||| ||||| || | |||||||||||||||||| |||| ||| |    
T  36406746 tttttaagtgtcacttttgaagaaattttttgttcttatttaactgttactttcaaagttcaatgtaacaataaatgttgttttaccaacattaccctta 36406845  T
Q  226 gttatttat 234  Q
    |||||||||    
T  36406846 gttatttat 36406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 1553495 - 1553618
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||  ||| |||||  ||||| |||| ||||  ||||||||||||||||  |||| |||||||| ||||||| ||||||||    
T  1553495 tactccctccgttcctttttaatcgtctcttttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacattaaatattgtttta 1553594  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  1553595 ccaatattatccttacttatttat 1553618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 35746907 - 35746784
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||  |||||||| ||||||||||  ||||||||||  | || |||||| ||||||||| ||||| |||| ||| ||||||||||||||||    
T  35746907 tactccctccgtacctttttaattgtcacttttggagaaaatttttatttctatttaaatgtcactttcaaagttcaatacaacattaaatgttgtttta 35746808  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| || |||||||    
T  35746807 ccaatattacccttagatatttat 35746784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 46286108 - 46285985
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| ||||||||  ||||||| ||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| |||||||| | ||||| ||||||||    
T  46286108 tacttcctccgttcttttttaactgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaagaataaatattgtttta 46286009  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  46286008 ccaacattacccttagttatttat 46285985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 30866998 - 30866876
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||  ||||||||||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||| |||||    
T  30866998 actccctccgttcttttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttggtttac 30866899  T
Q  212 caatattatcctcagttatttat 234  Q
    ||| |||| ||| ||||||||||    
T  30866898 caacattacccttagttatttat 30866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 22382337 - 22382212
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttc-tc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||| ||||||||  |||||||||  ||||||  ||||||| || | |||||||||||||| ||||| |||||||| |||||||| |||||    
T  22382337 tactccctccgttcctttttaaccgtcacttttagagaaaaaatttgttcctctaattaactgtcactttcaaagttcaatgcaacattaaatgatgttt 22382238  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||||||| || |||||||    
T  22382237 taccaatattatccttagatatttat 22382212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 2408919 - 2408827
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||| ||| |||||||||||||||||||  ||||||  |||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||    
T  2408919 cctctgttcctttttaagtgtcacttttggagaaaaaatttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttt 2408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 3837837 - 3837965
Alignment:
Q  107 ataagtactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg 205  Q
    |||| ||||||||| |||  |||||||||||  |||||  ||||||  |||||||| |||||||||||||||| |||||  ||||||| ||||||| |||    
T  3837837 ataattactccctctgttcatttttaagtgtttcttttggagaaaaaatttgttcttatttaactgtcactttcaaagtttaatgcaacattaaatattg 3837936  T
Q  206 ttttaccaatattatcctcagttatttat 234  Q
    ||||| |||||||||| | ||||||||||    
T  3837937 ttttatcaatattatctttagttatttat 3837965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31399194 - 31399071
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||||| ||| ||||  ||||||  ||||||    ||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  31399194 tactccctccattcctttttaagtatcatttttggagaaaaaatttgtttctttttaattgtcactttcaaagttcaatgcaacattaaatgttgtttta 31399095  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | ||||||||||    
T  31399094 ccaatattatctttagttatttat 31399071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 42842129 - 42842006
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||  |||||||||| |||||    
T  42842129 tactccatccgttcctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttatttta 42842030  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| || |||||||    
T  42842029 tcaatattacccttagatatttat 42842006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 43874345 - 43874222
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||||||||||||||||||||||||||  ||||  |||| ||||  ||||||||||||||||  || | |||||||| |||||||||| ||||     
T  43874345 tactccatccgtttctttttaagtgtcacttttagagaatttttttgttcctatttaactgtcactttcgaaattcaatgcaacattaaatgttattttg 43874246  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | | ||||||||    
T  43874245 ccaatattatcattacttatttat 43874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 10227229 - 10227359
Alignment:
Q  105 taataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgt 203  Q
    |||||| |||||| |  ||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||| | |||||||  |||||||||    
T  10227229 taataaatactccatgtgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaaattcaatgcatcattaaatgt 10227328  T
Q  204 tgttttaccaatattatcctcagttatttat 234  Q
    | ||||| ||||||||||||  |||||||||    
T  10227329 tattttatcaatattatcctttgttatttat 10227359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 7312612 - 7312720
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||||||||  | ||| ||||  | || |||||| |||||||||  |||| |||||||| |||||||||||||||||||||||| |||| |    
T  7312612 tttttaagtgtcacttttggataaattttttatttctatttaagtgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattgtcctta 7312711  T
Q  226 gttatttat 234  Q
    |||||||||    
T  7312712 gttatttat 7312720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 22057620 - 22057556
Alignment:
Q  170 tgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  22057620 tgtcactttcaaagttcaatgcaatattaaatgttgttttagcaatattacccttagttatttat 22057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 3310196 - 3310319
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  |||   |||| ||| | ||||||||||||||| |||||| |||||||| |||||||  |||||||    
T  3310196 tactccctccgttcctttttaagtgtctcttttggagattttttttgtttttatttaactgtcacttctaaagttcaatgcaacattaaataatgtttta 3310295  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||||  || ||||||||||    
T  3310296 tcaatattactcttagttatttat 3310319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 31815322 - 31815208
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    |||||| |||||||| ||||| ||||  |||||||||  |||| |||||||||| ||||| ||| | |||||||| ||||||| ||||||||||||||||    
T  31815322 tccgttcctttttaactgtcatttttggagaaaatttgtttct-atttaactgttactttcaaaattcaatgcaacattaaatattgttttaccaatatt 31815224  T
Q  219 atcctcagttatttat 234  Q
    | ||| || |||||||    
T  31815223 acccttagatatttat 31815208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 36648216 - 36648145
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||||||||||||||  |||| |||||||||||| || |||||||    
T  36648216 atttaactgtcactttcaaagttcaatgcaatattaaatgttaatttatcaatattatccttagctatttat 36648145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 17354283 - 17354181
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttcaagaaaattt-tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||| |||| ||| ||||||||||  ||||||  | |||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||    
T  17354283 ctccgttcctttataattgtcacttttagagaaaaaatatgttcatatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacgaata 17354184  T
Q  217 tta 219  Q
    |||    
T  17354183 tta 17354181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 29497780 - 29497690
Alignment:
Q  129 tttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    ||||| ||||||||||  |||||| |||| |||  |||||||||||||||| ||||| |||||||| |||||||||||||||| |||||||    
T  29497780 tttaactgtcactttttgagaaaaattttattcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatatt 29497690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 8966163 - 8966062
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||||||||| ||  |||||||||||   | |||||||||||||| ||||| |||||||| ||||||  ||||||||    
T  8966163 tactccctccgttcctttttaattgtcacttttgcataaaaattttgtttctaattaactgtcactttcaaagttcaatgcaacattaaacattgtttta 8966064  T
Q  211 cc 212  Q
    ||    
T  8966063 cc 8966062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 18194477 - 18194369
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||| ||||||||||  ||||||  |||||||  |||||||| ||| ||| ||| | |||||||| ||||||||||||||||    
T  18194477 tactccctccgttcttttttaactgtcacttttagagaaaaaatttgttcctatttaactatcattttcaaatttcaatgcaaaattaaatgttgtttta 18194378  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  18194377 ccaacatta 18194369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 34368870 - 34368814
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||    
T  34368870 atttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaatatta 34368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 5732267 - 5732213
Alignment:
Q  180 aaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  5732267 aaagttcaatgcaacattaaatgctgttttaccaatattatccttagttatttat 5732213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 36298426 - 36298314
Alignment:
Q  123 tttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatc 221  Q
    |||||||||||||||| ||||| |||||  ||||  | || |||||||||||||||| || || |||||||| |||||||| ||||||| || ||||| |    
T  36298426 tttctttttaagtgtctcttttgaagaatttttttgtttctatttaactgtcactttcaatgttcaatgcaacattaaatgatgttttatcagtattacc 36298327  T
Q  222 ctcagttatttat 234  Q
    || | ||||||||    
T  36298326 cttaattatttat 36298314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 42880999 - 42881059
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||| |||||||| |||  |||||||| |||||||||||||||| ||||||||||||    
T  42880999 atttaactatcactttttaaggtcaatgcaacattaaatgttgttttatcaatattatcct 42881059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 47459633 - 47459737
Alignment:
Q  121 cgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaat-gttgttttaccaatatt 218  Q
    ||||||||||||||||||||||||  |||||  ||||||||  |||||||||||| |||  |||| |||||||| |||||||  || |||| ||||||||    
T  47459633 cgtttctttttaagtgtcacttttggagaaattttttgttcatatttaactgtcattttcgaagttcaatgcaacattaaatatttttttttccaatatt 47459732  T
Q  219 atcct 223  Q
    |||||    
T  47459733 atcct 47459737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 3177910 - 3178033
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  ||||  ||||  | || | |||||||||||||| ||||| |||| ||| |||||||||||||||     
T  3177910 tactccctccgttcctttttaattgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgttttg 3178009  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||  ||||| |||  |||||||||    
T  3178010 ccgttattacccttggttatttat 3178033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 38168972 - 38168929
Alignment:
Q  191 caatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  38168972 caatattaagtgttgttttaccaatattatccttagttatttat 38168929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 36339453 - 36339352
Alignment:
Q  121 cgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaa--atgttgttttaccaatat 217  Q
    |||| ||||||||||||| |||||  |||||| ||||||| | |||||| ||||||||| |||||  |||||||||||||  || || ||||||||||||    
T  36339453 cgttcctttttaagtgtctcttttgtagaaaagttttgtttttatttaagtgtcactttcaaagtttaatgcaatattaaatatatttttttaccaatat 36339354  T
Q  218 ta 219  Q
    ||    
T  36339353 ta 36339352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 29722513 - 29722444
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||||||| | | | |||||||||||||||||||||||||| |||||| |||| | ||||||||    
T  29722513 ttaactttcactttcataattcaatgcaatattaaatgttgttttactaatattgtccttaattatttat 29722444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 26723956 - 26724027
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||| | |||||||| |||||||| | ||||| |||||||| ||| | ||||||||    
T  26723956 atttaactgtcactttcaaaattcaatgcaacattaaatgatattttatcaatattacccttaattatttat 26724027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 13431394 - 13431312
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaa 193  Q
    |||||||||||||  ||||||| ||||||||||  ||||||  |||||||  |||||||||||||||| ||| | ||||||||    
T  13431394 tactccctccgttcttttttaattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaaattcaatgcaa 13431312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 41409810 - 41409764
Alignment:
Q  174 acttttaaagtacaatgcaatattaaatgttgttttaccaatattat 220  Q
    ||||| ||||| ||| |||| ||||||||||||||||||||||||||    
T  41409810 actttcaaagttcaacgcaacattaaatgttgttttaccaatattat 41409764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 37354122 - 37354010
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| | |||| ||||||||||||| ||||| |||||| | |||| ||  |||||||||||||||| ||||| ||||||           ||||||||    
T  37354122 tactcctttcgttcctttttaagtgtctcttttgaagaaattatttgatcatatttaactgtcactttcaaagttcaatgc-----------ttgtttta 37354034  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  37354033 ccaatattatccttagttatttat 37354010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 2271322 - 2271350
Alignment:
Q  110 agtactccctccgtttctttttaagtgtc 138  Q
    |||||||||||||||||||||||||||||    
T  2271322 agtactccctccgtttctttttaagtgtc 2271350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 28608575 - 28608683
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||| |||||  ||||   ||||||||| |||||| ||||  ||  | ||| |||||||| |||||||||| |||||    
T  28608575 tactccctccgttcctttttaaatgtctcttttgtagaatttttttgttcttatttaagtgtcctttacatagttcaatgcaacattaaatgttatttta 28608674  T
Q  211 ccaatatta 219  Q
    | |||||||    
T  28608675 ctaatatta 28608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 47408118 - 47408150
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt 144  Q
    ||||||||||||| |||||||||||||||||||    
T  47408118 tactccctccgttcctttttaagtgtcactttt 47408150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 69077 - 69203
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||| ||||||||| ||||| ||||||||||||||||||||||    
T  69077 aagtactccctccgtttctttttaagtgtcacttttgaagaaaatttttgttcctatttaattgtcactttcaaagttcaatgcaatattaaatgttgtt 69176  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||||||| |||| ||||||||||    
T  69177 ttaccaatattgtccttagttatttat 69203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 92)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 167737 - 167614
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||| | |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  167737 tactccctccgtttctttttaagtgtcacttttggagaaaaattttgttttaatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 167638  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  167637 ccaatattatccttagttatttat 167614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 14263523 - 14263647
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  14263523 gtactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttaaaagttcaatgcaacattaaatgttgtttt 14263622  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  14263623 accaatattatccttagttatttat 14263647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 16701150 - 16701030
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    |||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  16701150 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcacttttaaagttcaatacaatattaaatgttgttttacca 16701051  T
Q  214 atattatcctcagttatttat 234  Q
    |||||||||| ||||||||||    
T  16701050 atattatccttagttatttat 16701030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 23429889 - 23430012
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  23429889 tactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 23429988  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  23429989 ccaatattatccttagttatttat 23430012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 16656675 - 16656801
Alignment:
Q  106 aataagtactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  16656675 aataaatactccctccgtttctttttaagtgtcacttttggagaaaaaatttgttctcatttaactgtcactttcaaagttcaatgcaaaattaaatgtt 16656774  T
Q  205 gttttaccaatattatcctcagttatt 231  Q
    |||||| ||||||||| || |||||||    
T  16656775 gttttagcaatattattcttagttatt 16656801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 33935319 - 33935197
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||||| |||||||||||| |||||| ||||||||||| ||||  |||||||||||||||| |||||  ||||||| ||||||| |||||||||    
T  33935319 actccctccgttcctttttaagtgttacttttgaagaaaatttttgttcctatttaactgtcactttcaaagtttaatgcaacattaaatattgttttac 33935220  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| ||||||||||    
T  33935219 caatattatccttagttatttat 33935197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 9954629 - 9954752
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||||||||  |||||| ||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  9954629 tacttcctccgttcctttttaagtgtcacttttggagaaaaatttagttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 9954728  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  9954729 ccaatattgtccttagttatttat 9954752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 25813008 - 25812885
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||||||  ||||||||| || ||| ||||| |||||||  ||||||||||||||||    
T  25813008 tactccctccgttcctttttaagtgtcacttttgaagaaatattttgttcctatttaactggcattttcaaagttcaatgcagcattaaatgttgtttta 25812909  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  25812908 ccaatattgtccttagttatttat 25812885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 12249031 - 12248918
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt--ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||  |||||||||||| ||||| |||||||    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  12249031 tactccctccgttcttttttaagtgtcgcttttgaagaaaaaaaattgttctcatttaactgtcactttcgaagttcaatgcaatattaaatgttgtttt 12248932  T
Q  210 accaatattatcct 223  Q
    ||||||||||||||    
T  12248931 accaatattatcct 12248918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 35052031 - 35052156
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||  ||||||||||  ||||||  |||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||    
T  35052031 agtactccctccgttcctttttatttgtcacttttggagaaaaaatttgttcatatttaactgtcactttcaaagttcaatgcaacattaaatgttgttt 35052130  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||||||| | ||||||||    
T  35052131 taccaatattatccttatttatttat 35052156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13327759 - 13327882
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||||||||  |||||| |||||||   |||||||||||||||| ||||| |||||||| |||||||||||||||     
T  13327759 tactccatccgttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttg 13327858  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | ||||||||||    
T  13327859 ccaatattatctttagttatttat 13327882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 21652006 - 21651883
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||||||||  |||| |||||| |||| ||||  ||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  21652006 tactctctccgttcctttttaagtgtcttttttgaagaaattttttgttcctatttaaccgccacttttaaagttcaatgcaacattaaatgttgtttta 21651907  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  21651906 ccaatattatccttagttatttat 21651883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 23848816 - 23848693
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||| |  ||||||| ||||||||||||||||    
T  23848816 tactacctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaaatttaatgcaacattaaatgttgtttta 23848717  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||||||||  |||||||||    
T  23848716 ccaatattatccttggttatttat 23848693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 25703837 - 25703714
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||||||  ||||||||| || ||| ||||| |||||||  |||||||||| |||||    
T  25703837 tactccctccgttcctttttaagtgtcacttttgaagaaatattttgttcctatttaactggcattttcaaagttcaatgcagcattaaatgttatttta 25703738  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  25703737 ccaatattgtccttagttatttat 25703714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34046831 - 34046954
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  34046831 tactccctccgttcctttttaagtgtcacttttagagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatattgtttta 34046930  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  34046931 ccaatattgtccttagttatttat 34046954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34981809 - 34981932
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  ||||| |||| ||||  | |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  34981809 tactccctccgttactttttaagtgtcgcttttggagaaattttttgttcctacttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 34981908  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  34981909 ccaatattgtccttagttatttat 34981932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 40521503 - 40521396
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||| ||||| |||||||| ||||||||||  ||||| |||| |||  |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  40521503 tactccccccgttcctttttaattgtcacttttggagaaattttttttcctatttaactgtcactttcaaagttcaatgcaatattaaatgttgttttac 40521404  T
Q  212 caatatta 219  Q
    ||||||||    
T  40521403 caatatta 40521396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 11993870 - 11993996
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    ||||||||| ||| || |||||||||||||||||||  |||||| |||||||   |||||||||||||||| |||||  ||||||| |||||||||||||    
T  11993870 aagtactccatccattcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcactttcaaagtttaatgcaacattaaatgttgtt 11993969  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||||||| |||| ||||||||||    
T  11993970 ttaccaatattgtccttagttatttat 11993996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 38483046 - 38482929
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||| |||||||||| ||||||||  |     ||||||||  |||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  38483046 tactccctccgttcctttttaagtttcacttttgga-----ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttac 38482952  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| ||||||||||    
T  38482951 caatattatccttagttatttat 38482929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 3720660 - 3720768
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||||||||| || ||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  3720660 tactccctccgttcctttttaattgtcacttttgaataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 3720759  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  3720760 ccaatatta 3720768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 4057304 - 4057391
Alignment:
Q  147 agaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  4057304 agaaaattttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgttgttttaccaatattgtccttaattatttat 4057391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18291444 - 18291566
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| | ||| |||||| |||| |||   |||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  18291444 tactccctccgttcctttttaagtgtctcctttgaagaaattttttgttgctatttaactgtcactttcaaagttcaatgcaatattaaatattgtttta 18291543  T
Q  211 ccaatattatcctcagttatttat 234  Q
    || |||||||||| ||||||||||    
T  18291544 cc-atattatccttagttatttat 18291566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 7606143 - 7606033
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    ||||||||||||  ||||| |||||| |||| ||||| ||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||     
T  7606143 ctttttaagtgtatcttttgaagaaattttttgttcttatttaactgtcacttttcaagttcaatacaatattaaatgttattttaccaatattatcctt 7606044  T
Q  225 agttatttatg 235  Q
    | |||||||||    
T  7606043 aattatttatg 7606033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 12763415 - 12763537
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| |||||| |||||||||||||||||||  ||||| |||||||   ||||||| |||||||| ||||| ||||||||  |||||||||||||||     
T  12763415 tactccttccgttcctttttaagtgtcacttttggagaaatttttgtttcaatttaaccgtcactttcaaagttcaatgcaactttaaatgttgttttat 12763514  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| ||||||||||    
T  12763515 caatattacccttagttatttat 12763537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 35051828 - 35051949
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||||||||||||||||| ||||| || |||| ||  | ||| |||||||||||||||  |||| |||||||| ||||||| |||||||||    
T  35051828 tactccctccgtttctttttaagtgtctcttttgaaaaaaagttgttcctc-tttaactgtcactttcgaagttcaatgcaacattaaatattgttttac 35051926  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| | ||||||||    
T  35051927 caatattatccttacttatttat 35051949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 45281638 - 45281514
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat--tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||| ||  ||||||||||||||||||  ||||||   ||| |||  |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  45281638 tactccctccattcttttttaagtgtcacttttggagaaaaaaatttcttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 45281539  T
Q  210 accaatattatcctcagttatttat 234  Q
     ||||||||||||| ||||||||||    
T  45281538 gccaatattatccttagttatttat 45281514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 31028634 - 31028742
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||||||| ||| ||||||||||   ||||||||| ||| | |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  31028634 tactctctccgtttctttataattgtcacttttagggaaaatttttgtttttatttaactgtcactttaaaagttcaatgcaacattaaatgttgtttta 31028733  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  31028734 ccaatatta 31028742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 2335413 - 2335536
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  2335413 tactccatccgttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 2335512  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  2335513 ccaacattacccttagttatttat 2335536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 8672280 - 8672390
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttc-aagaaaattttgt-tctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||| ||||||||||||||||||| ||||||||||  || |||| ||||| ||| |||||||||||||||| ||||| |||||||| |||||||||||||    
T  8672280 agtattccctccgtttctttttaattgtcacttttagaaaaaaaatttgtatct-atttaactgtcactttcaaagttcaatgcaacattaaatgttgtt 8672378  T
Q  208 ttaccaatatta 219  Q
    ||||||||||||    
T  8672379 ttaccaatatta 8672390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 17718483 - 17718606
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  | ||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||| |||||||||    
T  17718483 tactccctccgttcctttttaattgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaacgttgtttta 17718582  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| || |||||||    
T  17718583 ccaatattacccttagatatttat 17718606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 36058213 - 36058335
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||| ||||| |||||| ||||  | || |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  36058213 tactcactccgttcctttttaagtgtctcttttgaagaaattttttgtttctatttaactatcactttcaaagttcaatgcaacattaaatgttgtttta 36058312  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  36058313 -caatattatccttagttatttat 36058335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 39303776 - 39303669
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  ||||| |||| ||||  ||||||||||||||||  |||| |||||||| ||||||||||||||||    
T  39303776 tactccctccgttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacattaaatgttgtttta 39303677  T
Q  211 ccaatatt 218  Q
    ||||||||    
T  39303676 ccaatatt 39303669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 40604111 - 40603988
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||  |  | |||| ||||||||  |||||||||||| ||| ||||| |||||||| |||||||||| |||||    
T  40604111 tactccctccgttcctttttaagtgtcactgatggataaaaattttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttatttta 40604012  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  40604011 ccaatattatccttaattatttat 40603988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 19972260 - 19972382
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||||||  ||||||||| |||||||| || |||| ||||||   |||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  19972260 tactccctccgttcttttttaagtatcacttttaaaaaaaaatttgtttctatttaactgtcactttcaaaattcaatgcaacaataaatgttgttttac 19972359  T
Q  212 caatattatcctcagttatttat 234  Q
    ||| |||| ||| ||||||||||    
T  19972360 caacattacccttagttatttat 19972382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 21020573 - 21020451
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||||||  ||||||||| |||||||| || |||| ||||||   |||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  21020573 tactccctccgttcttttttaagtatcacttttaaaaaaaaatttgtttctatttaactgtcactttcaaaattcaatgcaacaataaatgttgttttac 21020474  T
Q  212 caatattatcctcagttatttat 234  Q
    ||| |||| ||| ||||||||||    
T  21020473 caacattacccttagttatttat 21020451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 38128798 - 38128685
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||||||| |||||||||||||||||||  |||||| |||||||   ||||||||||||||||       |||||||| ||||||||||||||||||    
T  38128798 ctccctccgttcctttttaagtgtcacttttggagaaaaattttgtttctatttaactgtcacttt-------caatgcaacattaaatgttgttttacc 38128706  T
Q  213 aatattatcctcagttattta 233  Q
    ||||||||||| |||||||||    
T  38128705 aatattatccttagttattta 38128685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 43553020 - 43553142
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||| |||||||||||||||||||  | ||||  |||||   |||||||||||||||| ||||| ||||||||  ||||| |||||||||     
T  43553020 tactccctccgttcctttttaagtgtcacttttggaaaaaaaattgtttcaatttaactgtcactttcaaagttcaatgcaactttaaacgttgttttat 43553119  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| ||||||||||    
T  43553120 caatattacccttagttatttat 43553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 43553505 - 43553380
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| ||||||||||||| |||||  ||||| |||| ||||  |||||||||||| |||  |||| |||||||| ||||||| || |||    
T  43553505 agtactccctccgttcctttttaagtgtctcttttggagaaattttttgttcctatttaactgtcattttcgaagttcaatgcaacattaaatattattt 43553406  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||||||| | ||||||||    
T  43553405 taccaatattatccttacttatttat 43553380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 1245293 - 1245415
Alignment:
Q  116 ccctccgtttctttttaagtgtcactttt---caagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||||||||||||| |||||   ||||||||   ||||||| |||||| ||||| ||| ||||| |||||||| |||||||||| ||||||    
T  1245293 ccctccgtttctttttaagtgtctcttttgaacaagaaaaaaattgttcttatttaattgtcattttcaaagttcaatgcaacattaaatgttattttac 1245392  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| | ||||||||    
T  1245393 caatattatccttaattatttat 1245415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13173909 - 13174032
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||  ||| ||||||||||||||||||   ||||| |||| ||||  |||||||||||||||||||||| |||||||| | ||||||||||||||    
T  13173909 tactccctatgttcctttttaagtgtcactttaagagaaagtttttgttcctatttaactgtcacttttaaagttcaatgcaacaataaatgttgtttta 13174008  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | || |||| ||| ||||||||||    
T  13174009 ctaacattacccttagttatttat 13174032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 43642197 - 43642126
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  43642197 atttaactgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattatccttagttatttat 43642126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 6750597 - 6750718
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||| ||| |||||||| ||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||||    
T  6750597 ctccctctgttcctttttaattgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttacc 6750696  T
Q  213 aatattatcctcagttatttat 234  Q
    || |||| ||| ||||||||||    
T  6750697 aacattacccttagttatttat 6750718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 6757388 - 6757509
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||| ||| |||||||| ||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||||    
T  6757388 ctccctctgttcctttttaattgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttacc 6757487  T
Q  213 aatattatcctcagttatttat 234  Q
    || |||| ||| ||||||||||    
T  6757488 aacattacccttagttatttat 6757509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 40228313 - 40228398
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||| |||||||  |||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||| || ||||||||||    
T  40228313 aaaaatttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgttttaccaatattattcttagttatttat 40228398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 8731087 - 8730979
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||| ||||||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  8731087 tactccctccgttcctttctaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 8730988  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  8730987 ccaacatta 8730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 26062688 - 26062810
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt---gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||| ||||||| |||||||||||||| ||||  ||||||||||   ||||  ||||||||||||||||  |||| |||||||| ||||| ||||||||    
T  26062688 tactctctccgttcctttttaagtgtcattttt--agaaaatttttttgttcctatttaactgtcactttcgaagttcaatgcaacattaa-tgttgttt 26062784  T
Q  209 taccaatattatcctcagttatttat 234  Q
    |||||||||| |||| ||||||||||    
T  26062785 taccaatattgtccttagttatttat 26062810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 7483724 - 7483847
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||| ||||  ||||| |||| ||||  |||| ||||||||||| ||||| |||||||| | ||||||||||||||    
T  7483724 tactccatccgttcctttttaagtgtcatttttggagaaattttttgttcctatttcactgtcactttcaaagttcaatgcaacaataaatgttgtttta 7483823  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| | ||||||||    
T  7483824 ccaacattacccttaattatttat 7483847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 10180350 - 10180473
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| ||||| || ||||||||||||| ||||| |||||| |||| ||||  |||||| ||||||||| |||||  ||||||| |||||| ||| |||||    
T  10180350 tacttcctccattcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagtttaatgcaacattaaacgttatttta 10180449  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | ||||||||||    
T  10180450 ccaatattatctttagttatttat 10180473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 26740345 - 26740274
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||| || |||||||    
T  26740345 atttaactctcacttttaaagttcaatgcaacattaaatgttgttttaccaatattacccttagatatttat 26740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 2456318 - 2456260
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatc 221  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  2456318 atttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatc 2456260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 35028587 - 35028693
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||| |||||| |||||||| |||||||||| ||||||| |||||||   |||||  ||||| ||||||||| |||||||| ||||||| |||||||    
T  35028587 gtactccttccgttcctttttaaatgtcacttttgaagaaaaattttgtttcaattta--tgtcaattttaaagttcaatgcaacattaaatattgtttt 35028684  T
Q  210 accaatatt 218  Q
    |||||||||    
T  35028685 accaatatt 35028693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 41305666 - 41305747
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| | |||||||||||||||||||||| |||||||| |||||||| ||||||| |||||||| ||| | ||||||||    
T  41305666 ttttgtttttatttaactgtcacttttaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 41305747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 8453486 - 8453371
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||||||| ||| ||||| |||||  ||||| |||| |||||||||||| ||||||||| |||||||| |||||||| ||||||| ||||||    
T  8453486 tccgttcctttttaagcgtctcttttgaagaattttttgcttct-atttaactgtcaattttaaagttcaatgcaacattaaatgatgttttatcaatat 8453388  T
Q  218 tatcctcagttatttat 234  Q
    || ||||  ||||||||    
T  8453387 taccctcgattatttat 8453371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 14228529 - 14228469
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  14228529 atttaactgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattatcct 14228469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 32010293 - 32010221
Alignment:
Q  162 catttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||| |||||||||||| ||| | |||||||| |||||||||||||||||||||||||| || ||||||||||    
T  32010293 cattaaactgtcactttcaaatttcaatgcaacattaaatgttgttttaccaatattattcttagttatttat 32010221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 14061409 - 14061286
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||||||||| ||||  || |||||||||||    ||||||||||||||| ||||  |||||||| |||||| |||||||||    
T  14061409 tactctctccgttcctttttaagtgtcattttttgaaaaaaattttgtttctgtttaactgtcactttcaaaggtcaatgcaacattaaaagttgtttta 14061310  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||  ||| ||||||||||    
T  14061309 tcaatattgcccttagttatttat 14061286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 27518967 - 27518868
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||||| |||| ||| |||||||||| |||||    
T  27518967 tactctctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttatttta 27518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 3513390 - 3513460
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||| |||||  ||||||| |||||||||||||||||| |||||||| | ||||||||||    
T  3513390 tttaactgtcactttcaaagtttaatgcaacattaaatgttgttttacctatattatcattagttatttat 3513460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 15647606 - 15647536
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||| ||| | ||||||||    
T  15647606 tttaactgtcactttcaaagttcaatgcaatattaaatgatgttttatcaatattacccttaattatttat 15647536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 1202662 - 1202581
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  ||||||||||||||||||||||  ||||||| ||||||| |||||||| ||||||| || | ||||||||||    
T  1202662 ttttgttcatatttaactgtcacttttaaagtttaatgcaacattaaatattgttttatcaatattgtctttagttatttat 1202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 18842513 - 18842618
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    |||||||||| |||||||||||||||||||  ||||  |||| ||||  |||||| |||||||||   ||| ||||||||||||||||||| |||||| |    
T  18842513 tccctccgttcctttttaagtgtcacttttggagaatttttttgttcctatttaagtgtcactttactagttcaatgcaatattaaatgttattttacta 18842612  T
Q  214 atatta 219  Q
    ||||||    
T  18842613 atatta 18842618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 12342864 - 12342764
Alignment:
Q  122 gtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattat 220  Q
    |||||||||||| | || ||||| |||||| ||||  | || |||||||| ||||||| ||||| |||||||| ||||||| ||||||||||||||||||    
T  12342864 gtttctttttaactctctcttttgaagaaattttttgtttctatttaactatcactttcaaagttcaatgcaacattaaatattgttttaccaatattat 12342765  T
Q  221 c 221  Q
    |    
T  12342764 c 12342764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 13935337 - 13935225
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||||||||||  |||||   ||| ||||||||||  |||||||||| |||||  |||| |||| ||| ||||||| || ||||    
T  13935337 gtactccctccgttcctttttaagtgtttcttttggtgaataattttgttcatatttaactgttactttcgaagttcaatacaacattaaatattatttt 13935238  T
Q  210 accaatattatcc 222  Q
    |||||||||||||    
T  13935237 accaatattatcc 13935225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 15596324 - 15596432
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  ||||  ||||  | || |||||||||||||||| ||||| ||||| || |||||||| |||||||    
T  15596324 tactccctccgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgtaaaattaaatgatgtttta 15596423  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  15596424 tcaatatta 15596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 33314523 - 33314647
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||| |||||| ||||||||||||  |||||  |||||| |||| |||  ||||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  33314523 tactccgtccgttcctttttaagtgtttctttttgaagaaattttttgtttccatttgactgtcactttcaaagttcaatgcaacattaaatgttgtttt 33314622  T
Q  210 accaatattatcctcagttatttat 234  Q
    || | ||| ||||| | ||||||||    
T  33314623 actagtatgatccttaattatttat 33314647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 10086398 - 10086292
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcag 226  Q
    ||||||||||||| ||||  ||||| |||||||||  |||||||||||||||||||||  | ||||| | |||||||||||||||| | || ||||| |     
T  10086398 tttttaagtgtcattttttgagaaa-ttttgttcttgtttaactgtcacttttaaagtttagtgcaacaataaatgttgttttaccgacatcatccttaa 10086300  T
Q  227 ttatttat 234  Q
    ||||||||    
T  10086299 ttatttat 10086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 11707693 - 11707622
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||| |||||||| ||| | ||||||||    
T  11707693 atttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 11707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 35498278 - 35498207
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||||||  ||||||| |||| |||| |||||| ||||||| |||| ||||||||||    
T  35498278 atttaactgtcacttttaaagtttaatgcaacattagatgtagttttatcaatattgtccttagttatttat 35498207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 15623818 - 15623748
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| |||||||| ||||| ||||||||||||||||| ||||||| |||||||| ||| | ||||||||    
T  15623818 tttaaccgtcactttcaaagttcaatgcaatattaaatgatgttttatcaatattacccttaattatttat 15623748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 38221793 - 38221915
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||| |||||||||||||||||||||| ||||  ||||| ||||  ||  |||||| ||||||||| ||||| ||||  || | |||||||||||||||    
T  38221793 tactctctccgtttctttttaagtgtcatttttagagaaattttttgtcctatttaattgtcactttcaaagttcaatataacaataaatgttgttttac 38221892  T
Q  212 caatattatcctcagttatttat 234  Q
     || |||| ||| | ||||||||    
T  38221893 aaacattacccttaattatttat 38221915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 8554276 - 8554163
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| ||||||||||||| || ||  ||||   ||||||||| |||||| |||||||||  | ||| |||||||| |||||||||| ||||    
T  8554276 tactccctccgttcctttttaagtgtctctcttgtagaatttttttgttcttatttaagtgtcactttacatagttcaatgcaacattaaatgttatttt 8554177  T
Q  210 accaatattatcct 223  Q
    || |||||||||||    
T  8554176 actaatattatcct 8554163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 23793521 - 23793412
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    |||||||| ||||| |||| || ||| ||||||||   |||||| ||||| ||| ||||| ||||| || ||| |||||||||||||||||||||||||     
T  23793521 ctttttaattgtcatttttaaaaaaatattttgtttctatttaattgtcattttcaaagttcaatgtaacattgaatgttgttttaccaatattatcctt 23793422  T
Q  225 agttatttat 234  Q
    || |||||||    
T  23793421 agatatttat 23793412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 27911878 - 27911825
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    |||| ||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  27911878 ttaattgtcactttcaaagttccatgcaatattaaatgttgttttaccaatatt 27911825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 27958297 - 27958244
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    |||| ||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  27958297 ttaattgtcactttcaaagttccatgcaatattaaatgttgttttaccaatatt 27958244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 29125881 - 29125990
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||| ||| |||||||||| ||  |||| |||||| | | |||||||||  ||| ||||| ||||||| |||||||||| |||||    
T  29125881 gtactccctccgttcctttataaatgtcacttttgcataaaaaatttgtttttaattaactgtcgttttcaaagtccaatgcattattaaatgtggtttt 29125980  T
Q  210 accaatatta 219  Q
    ||| ||||||    
T  29125981 acctatatta 29125990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 35296038 - 35296147
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    ||||||||||||||||||   ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||| |||||||||| | |||| | |     
T  35296038 ctttttaagtgtcactttagtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatattgttttaccgacattaccttt 35296137  T
Q  225 agttatttat 234  Q
    ||||||||||    
T  35296138 agttatttat 35296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 9808182 - 9808111
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||| ||| ||| ||||| |||| ||||||||||||||||||||| |||||| || | ||||||||||    
T  9808182 atttaactctcattttcaaagttcaatacaatattaaatgttgttttactaatattgtcattagttatttat 9808111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 41890556 - 41890603
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  41890556 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 41890603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 41701700 - 41701634
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    ||||||||  ||||||||| |||||||||||| |||||||| | |||||||| ||||||||| ||||    
T  41701700 ttttgttcgtatttaactgacacttttaaagttcaatgcaacaataaatgttcttttaccaacatta 41701634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 43553704 - 43553590
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||||||||||| |||||  ||||  |||| ||||  ||| ||||||||||||  ||||  ||||||| |||||||||||||||||| ||||    
T  43553704 tccgttcctttttaagtgtctcttttagagaatttttttgttcctattaaactgtcactttcgaagttaaatgcaacattaaatgttgttttaccgatat 43553605  T
Q  218 tatcctcagttattt 232  Q
     ||||| | ||||||    
T  43553604 catccttacttattt 43553590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 45317632 - 45317730
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||| ||| ||||||||||  ||||  |||| |||  || |||||||||||||| ||||| ||||| || |||||||||||||||    
T  45317632 tactccctccgttcctttataactgtcacttttacagaatttttttgtttccaattaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 45317730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 8954959 - 8954847
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||||||||||||||| ||||| ||||  ||||  ||||  | || | |||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  8954959 tactccttccgtttctttttaattgtcatttttgtagaatttttttgtttctaattaactgttactttcaaagttcaatacaatattaaatgttgtttta 8954860  T
Q  211 ccaatattatcct 223  Q
     |  |||||||||    
T  8954859 tctttattatcct 8954847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 14511684 - 14511567
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgc--------aatattaaatgttgttttaccaata 216  Q
    |||||||| ||||||||||  |||||| ||||||||| |||||||||||| ||| ||||| |||| |        |||||||||||||||||||| ||||    
T  14511684 ctttttaattgtcacttttagagaaaaattttgttcttatttaactgtcattttcaaagttcaatacttcaatgtaatattaaatgttgttttactaata 14511585  T
Q  217 ttatcctcagttatttat 234  Q
    ||| ||| || |||||||    
T  14511584 ttacccttagatatttat 14511567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 17074840 - 17074729
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaa-agtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||| ||||| |||||  ||||  ||||||||  |||||| |||||||||  | ||| |||||||| |||||||||  |||||    
T  17074840 tactccctccgttccttttta-gtgtctcttttgtagaattttttgttcctatttaaatgtcactttacatagttcaatgcaacattaaatgtaatttta 17074742  T
Q  211 ccaatattatcct 223  Q
    | |||||||||||    
T  17074741 ctaatattatcct 17074729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 17573430 - 17573541
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaa-agtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||| ||||| |||||  ||||  ||||||||  |||||| |||||||||  | ||| |||||||| |||||||||  |||||    
T  17573430 tactccctccgttccttttta-gtgtctcttttgtagaattttttgttcctatttaaatgtcactttacatagttcaatgcaacattaaatgtaatttta 17573528  T
Q  211 ccaatattatcct 223  Q
    | |||||||||||    
T  17573529 ctaatattatcct 17573541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2888728 - 2888619
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| ||||||||||||| |||||  ||||   ||||||||  |||||| |||||||||  | ||| |||||||| ||||||||||  |||    
T  2888728 tactccctccgttcctttttaagtgtctcttttggagaatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgttacttt 2888629  T
Q  210 accaatatta 219  Q
    || |||||||    
T  2888628 actaatatta 2888619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 13132322 - 13132253
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||| ||||| || ||||||||||||||| || ||| | |||| ||| ||||||    
T  13132322 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttttcctataatgtccttagtaatttat 13132253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 28206623 - 28206570
Alignment:
Q  146 aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaa 199  Q
    |||||||||||||| |  ||||||||||| ||||||||| |||| |||||||||    
T  28206623 aagaaaattttgtttttttttaactgtcatttttaaagttcaatacaatattaa 28206570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 38074261 - 38074354
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||| |||||||| ||||||||||  ||||| ||||  | || | |||||||||||||| |||||  ||| ||| |||||||||||||||    
T  38074261 cctccgttcctttttaattgtcacttttgtagaaattttttgtttctaattaactgtcactttcaaagtttaatacaacattaaatgttgtttt 38074354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 9301749 - 9301705
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||||||| | |||| ||| |||||||||||||||    
T  9301749 ttaactgtcacttttaaatttcaatacaacattaaatgttgtttt 9301705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 9687711 - 9687667
Alignment:
Q  170 tgtcacttttaaagtacaatgcaatattaaatgttgttttaccaa 214  Q
    ||||||||| ||||| |||||||| | ||||||||||||||||||    
T  9687711 tgtcactttcaaagttcaatgcaacaataaatgttgttttaccaa 9687667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 11163300 - 11163344
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  11163300 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 11163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 12252083 - 12252206
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  12252083 tactccctccgttcctttttaagtgtcacttttgaagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 12252182  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  12252183 ccaatattatccttagttatttat 12252206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 19527469 - 19527346
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  19527469 tactccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 19527370  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  19527369 ccaatattatccttagttatttat 19527346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 3436328 - 3436205
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  3436328 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 3436229  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  3436228 ccaatattatccttagttatttat 3436205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 5374611 - 5374488
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||  ||||||||||||||| ||||  |||||||| ||||||||||||||||    
T  5374611 tactccctccgtttctttttaagtgtcacttttggagaaattttttgttcttgtttaactgtcactttcaaagctcaatgcaacattaaatgttgtttta 5374512  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  5374511 ccaatattatccttagttatttat 5374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 32239383 - 32239506
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  |||||| ||||||||  |||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  32239383 tactccctccgttcctttttaaatgtcacttttggagaaaaattttgttcatatttaactgtcacttttaaagttcaatgcaacattaaatattgtttta 32239482  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  32239483 ccaatattatccttagttatttat 32239506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 52677406 - 52677283
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  52677406 tactccctccgttcctttttaagtgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 52677307  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  52677306 ccaatattatccttagttatttat 52677283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 56576364 - 56576241
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  56576364 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgtttta 56576265  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  56576264 ccaatattatccttagttatttat 56576241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 53600050 - 53599924
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||| |||||||||||||| ||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||| |||||    
T  53600050 aagtactccctccgttcctttttaagtgtcatttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgtt 53599951  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||||||||    
T  53599950 ttaccaatattatccttagttatttat 53599924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 13629454 - 13629331
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  13629454 tactccctccgttcctttttaagtgtcacttttgtagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 13629355  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  13629354 ccaatattgtccttagttatttat 13629331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 19093414 - 19093291
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||  | || ||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  19093414 tactccctccgtttctttttaagtgtctcttttaaagaaattttttgtttctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttta 19093315  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  19093314 ccaatattatccttagttatttat 19093291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 21045008 - 21044885
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  21045008 tactccctcagttcctttttaagtgtcactttttgagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 21044909  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | ||||||||||    
T  21044908 ccaatattatctttagttatttat 21044885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 26620612 - 26620489
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| || ||||||||||||||||||| |||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  26620612 tactccttctgtttctttttaagtgtcacatttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 26620513  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  26620512 ccaatattatccttagttatttat 26620489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 27492344 - 27492451
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  27492344 ctccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 27492443  T
Q  213 aatattat 220  Q
    ||||||||    
T  27492444 aatattat 27492451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 29295337 - 29295460
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||||||||||||||  |||||| ||||||||  |||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  29295337 tactccctcctttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtgactttcaaagttcaatgcaacattaaatgttgtttta 29295436  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  29295437 ccaatattatccttagttatttat 29295460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31862247 - 31862124
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  31862247 tactccctccgttcctttttaagtgtctcttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 31862148  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  31862147 ccaatattatccttatttatttat 31862124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 38617568 - 38617445
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||||  |||||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  38617568 tactccctccgttcctttttaagtgtcacttttggagaaatattttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttta 38617469  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  38617468 ccaatattgtccttagttatttat 38617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 48782183 - 48782306
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  | ||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  48782183 tactccctccgtttctttttaagtgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 48782282  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  48782283 ccaatattgtccttagttatttat 48782306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 22678580 - 22678447
Alignment:
Q  103 actaataagtactccctccgtttctttttaagtgtcacttttc--aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaa 200  Q
    ||||| || ||||||||| ||| |||||||||||||||||||   |||||||  ||||||| ||||||||||| |||| ||||| |||||||||||||||    
T  22678580 actaacaactactccctcagttcctttttaagtgtcacttttggaaagaaaaaattgttcttatttaactgtcgctttcaaagttcaatgcaatattaaa 22678481  T
Q  201 tgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||||||| ||| ||||||    
T  22678480 tgttgttttaccaatattatccttagtaatttat 22678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 33084461 - 33084582
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||| ||||| |||||||||| ||||| ||||| |||| ||| ||||||||||||||||    
T  33084461 tactccctccgtttctttttaagtgtctcttttgaagaaactttttgttcttatttaactgttactttcaaagttcaatacaacattaaatgttgtttta 33084560  T
Q  211 ccaatattatcctcagttattt 232  Q
    ||||||||||| | ||||||||    
T  33084561 ccaatattatctttagttattt 33084582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 44014175 - 44014051
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||||| |||||| ||||  ||||||  |||||||  |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  44014175 gtactccctccgttcctttttatgtgtcatttttggagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 44014076  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  44014075 accaatattatccttagttatttat 44014051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 16465043 - 16464921
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| ||||||||||||||||||| |||||| |||| |||   |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  16465043 tactccatccgttcctttttaagtgtcacttttgaagaaattttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 16464944  T
Q  211 ccaatattatcctcagttattta 233  Q
    |||||||| |||| |||||||||    
T  16464943 ccaatattgtccttagttattta 16464921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 33755343 - 33755223
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg--ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||| |||| |||||||||||||||||||  ||||||||||   ||||| ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  33755343 tactcccttcgttcctttttaagtgtcacttttagagaaaatttttatttctc-tttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 33755245  T
Q  210 accaatattatcctcagttatt 231  Q
    |||||||||||||| |||||||    
T  33755244 accaatattatccttagttatt 33755223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 23623753 - 23623644
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    |||||||||| |||||||||||||||||||  |||||||||| |||   |||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  23623753 tccctccgttcctttttaagtgtcactttttgagaaaatttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacca 23623654  T
Q  214 atattatcct 223  Q
    ||||||||||    
T  23623653 atattatcct 23623644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 234
Target Start/End: Original strand, 46871898 - 46872027
Alignment:
Q  106 aataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||| |||| |||||||| |||||||||||||||||||  | ||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||    
T  46871898 aataactacttcctccgttcctttttaagtgtcacttttggataaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 46871997  T
Q  205 gttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| |||| ||||||||||    
T  46871998 gttttaccaatattgtccttagttatttat 46872027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 42513280 - 42513164
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||||||||||||||  |||||| |||||||   |||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  42513280 tccgttcctttttaagtgtcacttttggagaaaaattttgttactatttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatat 42513181  T
Q  218 tatcctcagttatttat 234  Q
    |||||| ||||||||||    
T  42513180 tatccttagttatttat 42513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 4201579 - 4201456
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  4201579 tactccctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaattcaacattaaatgttgtttta 4201480  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| | ||||||||    
T  4201479 ctaatattatccttaattatttat 4201456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 16664224 - 16664347
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||||| |  ||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  16664224 tactccctccgttcctttttaagtgtcacttttggagaaatattttgtccctatttaacggtcactttcaaagttcaatgcaacattaaatgttgtttta 16664323  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||| |||| |||| ||||||||||    
T  16664324 ccagtattgtccttagttatttat 16664347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34464260 - 34464383
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| || |||||||||||||||||| |||| |||||||  |||||||  |||||||||||||||| | ||| |||||||||||||||||||||||||    
T  34464260 tactccatctgtttctttttaagtgtcatttttgaagaaaaaatttgttcctatttaactgtcactttcatagttcaatgcaatattaaatgttgtttta 34464359  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||| | ||||||||||    
T  34464360 tcaatattatcattagttatttat 34464383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 44069014 - 44069137
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  44069014 tactccctccgttcctttttaagtgtcacttttgtagaaaaattttgttcctatttaagtgtcactttcaaagttcaatgcaacattaaatgttgtttta 44069113  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| | || ||||||||||    
T  44069114 tcaatattgttcttagttatttat 44069137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 44217689 - 44217812
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||||||||||||||  ||||| ||||  | || ||||||||||||||||  |||| |||||||| ||||||||||||||||    
T  44217689 tactctctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgtttta 44217788  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  44217789 ccaatattatccttagttatttat 44217812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 47428512 - 47428635
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||| ||||||||||||||  |||||| ||||||||  ||||||||||| |||| ||||| |||||||| ||||||||||||||||    
T  47428512 tactccctccattcctttataagtgtcacttttggagaaaaattttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgttgtttta 47428611  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  47428612 ccaatattgtccttagttatttat 47428635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 8741886 - 8741762
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||| ||| |||||||||||||| |||| ||||||| |||| |||  |||||||||||| ||| ||||| |||| ||| |||||||||||||||    
T  8741886 gtactccctctgttcctttttaagtgtcaattttgaagaaaaatttggttcatatttaactgtcattttcaaagttcaatacaacattaaatgttgtttt 8741787  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||| | ||||||||||    
T  8741786 accaatattatctttagttatttat 8741762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 50623397 - 50623520
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||   ||||||  ||||||   |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  50623397 tactccctccgttcctttttaagtgtcactttaggagaaaaaatttgtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttta 50623496  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  50623497 ccaatattatccttaattatttat 50623520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 41414991 - 41415113
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||| |||||||||||||||||||||| |||| |||||| |||||||   |||||| ||||||||| ||||| |||||||| | |||||||||||||||    
T  41414991 tactctctccgtttctttttaagtgtcatttttgaagaaatttttgtttctatttaattgtcactttcaaagttcaatgcaacaataaatgttgttttac 41415090  T
Q  212 caatattatcctcagttatttat 234  Q
    ||| |||| ||| || |||||||    
T  41415091 caacattacccttagctatttat 41415113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 55147280 - 55147199
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  55147280 ttttgttttcatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttacttatttat 55147199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 353964 - 354072
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    |||||||||||| ||||| |||||| |||| ||||  |||||| ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||| |    
T  353964 tttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattatcctta 354063  T
Q  226 gttatttat 234  Q
    |||||||||    
T  354064 gttatttat 354072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 9834246 - 9834370
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||| ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||||||||| |||||||| ||||||| || ||||    
T  9834246 gtactccctcagttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcacttttaaagttcaatgcaacattaaatcttatttt 9834345  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||  ||||| |||| ||||||||||    
T  9834346 acatatattgtccttagttatttat 9834370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 30939138 - 30939246
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| ||||||||||||||||| ||||||||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  30939138 tacttcctccgtttctttttaattgtcacttttagagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 30939237  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  30939238 ccaatatta 30939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 33809070 - 33809178
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||| ||||||||||  |||||||||| ||||| ||||||||||||| || |||||  ||||||||| ||||||||||||||    
T  33809070 tactctctccgttcctttttaattgtcacttttggagaaaatttttgttcttatttaactgtcacattcaaagtttaatgcaatagtaaatgttgtttta 33809169  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  33809170 ccaatatta 33809178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 36750160 - 36750268
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| ||||||||||||||||||| |||||| |||| ||||  ||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  36750160 tacttcctctgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcgaagttcaatacaatattaaatgttgtttta 36750259  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  36750260 ccaatatta 36750268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 47093790 - 47093918
Alignment:
Q  107 ataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg 205  Q
    |||| |||| ||||| || ||||||||||||||||||| |||||| |||| ||||  ||||||| |||||||| ||||| |||||||  |||| ||||||    
T  47093790 ataattacttcctccattcctttttaagtgtcacttttgaagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcatcattatatgttg 47093889  T
Q  206 ttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||  |||||||||    
T  47093890 ttttaccaatattatcctttgttatttat 47093918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 35232558 - 35232436
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||| ||||  ||||||||||| |||  |||||||| |||| || ||||| |||||||| ||||||||||||||||    
T  35232558 tacttcctccgttcctttttaagtgtca-ttttggagaaaattttggttcctatttaactatcacgttcaaagttcaatgcaacattaaatgttgtttta 35232460  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  35232459 ccaatattatccttacttatttat 35232436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 36408706 - 36408829
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||| ||| | ||| ||||| |||||||| ||||||||||||||||    
T  36408706 tactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaattgtaattttcaaagttcaatgcaacattaaatgttgtttta 36408805  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| || | ||||||||||    
T  36408806 acaatattctctttagttatttat 36408829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 36422872 - 36422995
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||| ||| | ||| ||||| |||||||| ||||||||||||||||    
T  36422872 tactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaattgtaattttcaaagttcaatgcaacattaaatgttgtttta 36422971  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| || | ||||||||||    
T  36422972 acaatattctctttagttatttat 36422995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 39683975 - 39683852
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||||||  ||||||||||||| ||||  |||||| |||||||   |||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  39683975 tactccttccgttcttttttaagtgtcatttttgtagaaaaattttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatattgtttta 39683876  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| |||| ||||||||||    
T  39683875 tcaatattgtccttagttatttat 39683852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 35381675 - 35381553
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| |||||| ||||||| ||||| ||||| ||||   |||||||   |||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  35381675 tactccatccgttcctttttatgtgtctcttttgaagatttttttgtttctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttac 35381576  T
Q  212 caatattatcctcagttatttat 234  Q
     ||||||||||| ||||||||||    
T  35381575 taatattatccttagttatttat 35381553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 6195049 - 6195130
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  ||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  6195049 ttttgttcctatttaactgtcacattcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttat 6195130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 23720040 - 23719936
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||   |||||||||||||||  |||| |||||||| |||||||||||||||||||||    
T  23720040 cctccgttcctttttaagtgtcacttttagagaaattttttgttcctgtttaactgtcactttcgaagttcaatgcaacattaaatgttgttttaccaat 23719941  T
Q  216 attat 220  Q
    |||||    
T  23719940 attat 23719936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 8735388 - 8735495
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcag 226  Q
    ||||||||||||| |||  |  |||||||||||   |||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||||| || ||    
T  8735388 tttttaagtgtcattttagagaaaaattttgtttctatttaattgtcactttcaaagttcaatgcaatattaaatattgttttaccaatattattcttag 8735487  T
Q  227 ttatttat 234  Q
    ||||||||    
T  8735488 ttatttat 8735495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 39671308 - 39671431
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||  ||| ||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  39671308 tactctctccgttccttcataattgtcacttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgtagtttta 39671407  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| | ||||||||    
T  39671408 ccaatattgtccttaattatttat 39671431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 42133020 - 42133143
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||  |||||||||  ||||| |||| ||||  ||||||||||| |||| ||||| |||||||| ||||||||| ||||||    
T  42133020 tactccctccgttcctttttaatcgtcacttttagagaaattttttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgtagtttta 42133119  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| || |||||||    
T  42133120 tcaatattatccttagatatttat 42133143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 29833194 - 29833064
Alignment:
Q  105 taataagtactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgt 203  Q
    |||||| |||| ||||||||  |||||||||||| |||||  ||||| || ||||||  |||||||||| ||||||||||| |||||||| | |||||||    
T  29833194 taataattacttcctccgttcatttttaagtgtctcttttggagaaatttcttgttcctatttaactgttacttttaaagttcaatgcaacaataaatgt 29833095  T
Q  204 tgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||| ||||| |  |||||||||    
T  29833094 tgttttaccaatgttatcgttggttatttat 29833064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 37502004 - 37502128
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagta-caatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  | || ||||||| |||||||| ||||   |||||||| |||||||||||||||    
T  37502004 tactccctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaaccgtcactttcaaagggtcaatgcaacattaaatgttgtttt 37502103  T
Q  210 accaatattatcctcagttatttat 234  Q
    | |||||||| ||| ||||||||||    
T  37502104 atcaatattacccttagttatttat 37502128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 52057699 - 52057589
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctc---atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||||||||||||| |||||  |||| || |    |||||||||||||||| ||||| |||||||| |||||||||| ||||| ||||||||||||    
T  52057699 tttttaagtgtcacttttgaagaatttttttttttttcaatttaactgtcactttcaaagttcaatgcaaaattaaatgttattttatcaatattatcct 52057600  T
Q  224 cagttatttat 234  Q
     ||||||||||    
T  52057599 tagttatttat 52057589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 9220302 - 9220179
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||| ||||||||||  ||||||  |||||||  | |||||||||||||| ||||| ||||| || |||||||| |||||||    
T  9220302 tactccctccgttcttttttaactgtcacttttagagaaaaaatttgttcctaattaactgtcactttcaaagttcaatgtaacattaaatgatgtttta 9220203  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| || |||||||    
T  9220202 ccaatattacccttagatatttat 9220179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 26934032 - 26933909
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||| || | ||||  ||||| ||||  | ||| ||||||||||| ||||||||| ||||||||  |||||||||||||||    
T  26934032 tactccctccgttcctttttaagcgttatttttggagaaattttttgtttcaatttaactgtcatttttaaagttcaatgcaactttaaatgttgtttta 26933933  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| ||||||||||    
T  26933932 tcaatattacccttagttatttat 26933909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 47251396 - 47251519
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||| || |||||||| |||| ||||| |||||| ||||  | || ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  47251396 tactccttcctttcctttttaactgtctcttttgaagaaattttttgtttctattcaactgtcactttcaaagttcaatgcaatattaaatgttgtttta 47251495  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||||| || || |||||||    
T  47251496 tcaatattattcttagctatttat 47251519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 52258051 - 52257929
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| |||||||| |||||||| ||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  52258051 tactccctccatttctttt-aagtgtcattttttgagaaattttttatttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 52257953  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||||| | ||||||||||    
T  52257952 ccaacattatctttagttatttat 52257929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 55935090 - 55935213
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||| | ||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  55935090 tactccatccgttcctttttaagtgttatttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 55935189  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  55935190 ccaacattacccttagttatttat 55935213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 26906612 - 26906527
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||| | |||||||||||||||| || || |||||||| ||||||| ||||||||| |||||||| || ||||||||||    
T  26906612 aaaattttgtttttatttaactgtcactttcaaggttcaatgcaacattaaatattgttttactaatattattcttagttatttat 26906527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 34361039 - 34361132
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    |||||||||||||||||||||| ||||||||||  |||||  ||||||||  |||||||||||||||| ||| | |||||||| ||||||||||    
T  34361039 tactccctccgtttctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaaattcaatgcaacattaaatgtt 34361132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 35231711 - 35231796
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||| || | ||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| |||| | ||||||||    
T  35231711 aaaattttatttttatttaaccgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttaattatttat 35231796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 38542499 - 38542414
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||  |||||| ||||||||| ||| | || ||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  38542499 aaaattttgttcctatttaaatgtcactttcaaaattcagtgcaacattaaatattgttttaccaatattatccttagttatttat 38542414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 18781514 - 18781585
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||| | |||||||||||||||| || |||||||||||||||| | ||||||||||    
T  18781514 atttaactgtcactttcaaatttcaatgcaatattaaatattcttttaccaatattatctttagttatttat 18781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 22828662 - 22828539
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  ||||  ||||  | || |||||||||||||||| ||||| |||||||| |||| ||| |||||||    
T  22828662 tactccctccgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattacatgatgtttta 22828563  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| | ||||||||    
T  22828562 tcaatattacccttaattatttat 22828539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 37987536 - 37987647
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgca-----atattaaatgttgttt 208  Q
    ||||||||||||||| ||||||| | |||| ||||||| ||||||||  ||||||| |||| ||||||||| |||||||     | ||||||||||||||    
T  37987536 tccctccgtttctttctaagtgttatttttgaagaaaaattttgttcctatttaaccgtcatttttaaagttcaatgcaacattaaattaaatgttgttt 37987635  T
Q  209 taccaatattat 220  Q
    ||||||||||||    
T  37987636 taccaatattat 37987647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 18135313 - 18135203
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| ||||||||||||| |||||  | ||||  ||||| |||||||| |||||||||  | ||| |||||||| |||||||||| |||    
T  18135313 agtactccctccgttcctttttaagtgtctcttttgtaaaaaaaattgttttcatttaagtgtcactttacatagttcaatgcaacattaaatgttattt 18135214  T
Q  209 taccaatatta 219  Q
    ||| |||||||    
T  18135213 tactaatatta 18135203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 49122523 - 49122413
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| ||||||||||||| |||||  | ||||  ||||| |||||||| |||||||||  | ||| |||||||| |||||||||| |||    
T  49122523 agtactccctccgttcctttttaagtgtctcttttgtaaaaaaaattgttttcatttaagtgtcactttacatagttcaatgcaacattaaatgttattt 49122424  T
Q  209 taccaatatta 219  Q
    ||| |||||||    
T  49122423 tactaatatta 49122413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 53691909 - 53691807
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||| |||||||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||| ||  |||||||||||||||| |||||    
T  53691909 ctccgttcctttttaattgtcacttttagagaaattttttgttccaatttaactgtcactttcaaagttcaatacatcattaaatgttgttttatcaata 53691810  T
Q  217 tta 219  Q
    |||    
T  53691809 tta 53691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 30151697 - 30151778
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| |||||||||||| |||  |||| ||| |||| |||||||||||||||| |||||||||||| | ||||||||    
T  30151697 ttttgttcttatttaactgtcattttcgaagttcaacgcaacattaaatgttgttttatcaatattatccttacttatttat 30151778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 51347240 - 51347368
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa------ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg 205  Q
    |||||| |||||| |||||||| | |||||||| |||||||      ||||||||  ||||| |||||||||| |||||  |||| || |||||||||||    
T  51347240 tactccttccgttcctttttaattatcacttttaaagaaaaaaaatattttgttcctatttatctgtcactttcaaagtttaatgtaacattaaatgttg 51347339  T
Q  206 ttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| ||| || |||||||    
T  51347340 ttttaccaatattacccttagatatttat 51347368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 19399568 - 19399639
Alignment:
Q  162 catttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||| ||||| |||||||||| |||| ||||||||||||| |||| ||| ||||||||||    
T  19399568 catttaactgtcactttcaaagttcaatgcaataataaa-gttgttttaccaacattacccttagttatttat 19399639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 36750539 - 36750655
Alignment:
Q  119 tccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||||||| | ||||  || ||||  ||||||| |||||||||||||||  ||||| |||||||| | |||||||||||||||||| ||    
T  36750539 tccgttcctttttaagtgttatttttggaaaaaaaaattgttcttatttaactgtcacttacaaagttcaatgcaacaataaatgttgttttaccaacat 36750638  T
Q  218 tatcctcagttatttat 234  Q
    || ||| | ||||||||    
T  36750639 tacccttaattatttat 36750655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 31369836 - 31369907
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||| |||  |||| |||||||| ||||||| ||||||||||||||||||||| | ||||||||    
T  31369836 atttaactgtcattttcgaagttcaatgcaacattaaatattgttttaccaatattatccttacttatttat 31369907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 41955883 - 41955812
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||||| |||||||| ||||||| |  ||||| |||||||||||| || |||||||    
T  41955883 atttaactgtcacttttaaagttcaatgcaacattaaatataattttatcaatattatccttagatatttat 41955812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 45725571 - 45725642
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||||| ||||||||| |||||||||||||||| || ||||| |||||||||||| | ||||||||    
T  45725571 atttaattgtcatttttaaagttcaatgcaatattaaatattattttatcaatattatccttaattatttat 45725642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 47596869 - 47596766
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||||||||||||||||| |||||  |||||| |||||||   |||||| ||||| ||| ||||| |||||||||||| | | |||||||| ||||    
T  47596869 cctccgtttctttttaagtgtctcttttgtagaaaatttttgtttctatttaattgtcattttcaaagttcaatgcaatattgagtattgttttatcaat 47596770  T
Q  216 atta 219  Q
    ||||    
T  47596769 atta 47596766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 23237667 - 23237733
Alignment:
Q  168 actgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||||||||||| |||| | ||||||||    
T  23237667 actgtcactttcaaagttcaatgcaacattaaatgttattttaccaatattgtccttaattatttat 23237733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 37394368 - 37394298
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttattta 233  Q
    |||||||||||||||| ||||| |||||||| | |||||||||||||||||| |||| ||| | |||||||    
T  37394368 atttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacccttaattattta 37394298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 40411924 - 40412049
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||| | | ||||||||||||| |||||  || ||||  ||||||  |||||||||||| ||| ||||| ||||| || ||||||| |||||    
T  40411924 aagtactccctc-gatcctttttaagtgtctcttttggaaaaaaaaattgttcctatttaactgtcattttcaaagttcaatgtaacattaaatattgtt 40412022  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||| |||||||||||| | ||||||||    
T  40412023 ttatcaatattatccttaattatttat 40412049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 36659646 - 36659565
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||| ||||| ||||| |||||||| ||||||||||| ||||  |||||||| || ||||||||||    
T  36659646 ttttgttcctatttaactgttactttcaaagttcaatgcaacattaaatgttgatttattaatattattcttagttatttat 36659565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 38617806 - 38617911
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattt-tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||| ||||||||||  ||||| | | |||||  |||||| ||||||||| |||||  ||||||| ||||||| |||||||| ||||||    
T  38617806 tccgttcctttttaattgtcacttttagagaaactatctgttcctatttaattgtcactttcaaagtttaatgcaacattaaatattgttttatcaatat 38617905  T
Q  218 tatcct 223  Q
    ||||||    
T  38617906 tatcct 38617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 41813625 - 41813726
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||| ||| ||||||  | ||||||||  | || | |||| ||||||||| ||||| |||||||||||||||||||||||||    
T  41813625 tactacctccgttcctttttaattgttacttttgcataaaatttttgtttctaattaagtgtcactttcaaagttcaatgcaatattaaatgttgtttta 41813724  T
Q  211 cc 212  Q
    ||    
T  41813725 cc 41813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 44549668 - 44549749
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| | ||||||||||| |||| |||||  ||||||| |||||||| ||||||| ||||||||| || ||||||||||    
T  44549668 ttttgttattatttaactgtcgctttcaaagtttaatgcaacattaaatgctgttttatcaatattattcttagttatttat 44549749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 47751517 - 47751612
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||||||| |||||| |||||||||||||||||||  |||||  ||||||||  |||||||||||| |||||| || ||||||||  |||||||||    
T  47751517 aagtactccttccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcatttttaaggt-caatgcaactttaaatgtt 47751612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 43887966 - 43888088
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  | |||  ||||||||  |||||| ||||||||| ||||| |||| ||  ||| ||||||||||||    
T  43887966 tactccctccgttcctttttaattgtcacttttagataaattttttgttcctatttaattgtcactttcaaagttcaatacatcatt-aatgttgtttta 43888064  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| || |||||||    
T  43888065 tcaatattacccttagatatttat 43888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 54231574 - 54231645
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaata-ttaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||| ||||||||| |||| ||| | ||||||||| |||||| ||||||||||| ||||||||||    
T  54231574 tttaactgtcatttttaaagttcaattcaacaattaaatgttattttactaatattatccttagttatttat 54231645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 34603607 - 34603705
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||| ||| ||||||||||  ||||| ||||  | || | |||||||||||||| ||||| ||||| || |||||||||||||||    
T  34603607 tactccctccgttcctttataactgtcacttttacagaaattttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 34603705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 16512816 - 16512761
Alignment:
Q  19 ggaatgaaagattaatagttgaaaaatgtaata-ggatgataaatataattgtcaaa 74  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  16512816 ggaatgaacgattaatagttg-aaaatgtaatagggatgataaatatgattgtcaaa 16512761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 37551926 - 37551830
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    ||||||||||||| |||||||| ||||||||||  |||||  |||||||   | |||| ||||||||| ||||| |||| ||| |||||||||||||    
T  37551926 tactccctccgttcctttttaattgtcacttttgtagaaattttttgtttctaattaagtgtcactttcaaagttcaatacaacattaaatgttgtt 37551830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 3036420 - 3036491
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||||||||| |||||  |||| ||||||||||||| ||||||| |||||| ||| ||| ||||||    
T  3036420 atttaattgtcactttcaaagtttaatgtaatattaaatgttattttaccgatattacccttagtaatttat 3036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 17698551 - 17698642
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatg 202  Q
    ||||||||| ||| |||||| ||||||  |||| |||||| ||||  | || |||||| ||||||||||||||| |||||||| ||||||||    
T  17698551 tactccctctgttccttttttagtgtcgtttttgaagaaattttttgtttctatttaattgtcacttttaaagttcaatgcaacattaaatg 17698642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 54029135 - 54029182
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  54029135 ttaactgtcactttcaaagttcaatgcaacattaaatgttattttacc 54029182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 19740800 - 19740718
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaa 193  Q
    |||||||||| || |||||||| ||||||||||  ||||||   ||||||| |||||||||||||| | ||||| ||||||||    
T  19740800 tactccctccattcctttttaattgtcacttttagagaaaacaattgttcttatttaactgtcactatcaaagttcaatgcaa 19740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 33755201 - 33755167
Alignment:
Q  200 atgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||||||| ||||||||||    
T  33755201 atgttgttttaccaatattatccttagttatttat 33755167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 39308968 - 39309026
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||| | ||||||||||||||| |  ||||||||| |||||||| ||||||||||    
T  39308968 ttaactgtaatttttaaagtacaatgtatcattaaatgtagttttacctatattatcct 39309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 27918585 - 27918682
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||| |||||| |||||||||| || |||||  |||||  |||||||   ||||| |||||||||| ||||| ||||  |||||||||||||||||    
T  27918585 tactccttccgttcctttttaagtatctcttttgtagaaatgttttgtttctatttagctgtcactttcaaagttcaatcaaatattaaatgttgttt 27918682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 6150731 - 6150775
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  6150731 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 6150775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 20294267 - 20294299
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt 144  Q
    |||||||||||||||||||||| ||||||||||    
T  20294267 tactccctccgtttctttttaattgtcactttt 20294299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 42645290 - 42645377
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatatta 198  Q
    ||||||| |||||| ||||||||| ||| ||||| ||||   |||| ||||| |||||||||||||||| ||||| |||||||| ||||    
T  42645290 gtactccttccgttcctttttaagcgtctcttttgaagattttttt-ttctctatttaactgtcactttcaaagttcaatgcaacatta 42645377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 48510130 - 48510022
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||| ||| |||||||||| ||  || |||||||| | | |||||||||  ||| ||||| ||||| |  ||||||||| | ||||    
T  48510130 tactccctccgtttctttataattgtcacttttgcataaagattttgtttttaattaactgtcgttttcaaagttcaatgtatcattaaatgtggcttta 48510031  T
Q  211 ccaatatta 219  Q
    || ||||||    
T  48510030 cctatatta 48510022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 51244604 - 51244727
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| |||||||| |||||||||| ||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  51244604 tactccctctgttcctttttaaatgtcacttttgaagaaaaattttgttcttatttaactgtcactttcaaagttcaatgcaatattaaatgttgtttta 51244703  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  51244704 ccaatattatccttagttatttat 51244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 54106243 - 54106366
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || ||||||||||||||||||| ||||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  54106243 tactccctccattcctttttaagtgtcacttttgaagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 54106342  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  54106343 ccaatattatccttagttatttat 54106366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13167996 - 13168120
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcactttt-aaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  13167996 tactccctccgttcctttttaagtgtcacttttagagaaaattattgttcttatttaactgtcatttttcaaagttcaatgcaacattaaatgttgtttt 13168095  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  13168096 accaatattatccttagttatttat 13168120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 234
Target Start/End: Original strand, 790524 - 790653
Alignment:
Q  106 aataagtactccctccgtttctttttaagtgtcacttttcaagaaaattt-tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||| ||||||||||||| |||||||||||||||||||  ||||||||| ||||   |||||||||||||||| ||||| |||||||| ||||||||||    
T  790524 aataaatactccctccgttcctttttaagtgtcacttttggagaaaatttatgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgtt 790623  T
Q  205 gttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| |||| ||||||||||    
T  790624 gttttaccaatattgtccttagttatttat 790653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 53745547 - 53745426
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  53745547 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 53745448  T
Q  211 ccaatattatcctcagttattt 232  Q
    ||||||||||||| ||||||||    
T  53745447 ccaatattatccttagttattt 53745426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 43554370 - 43554493
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  43554370 tactccatccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 43554469  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  43554470 ccaatattgtccttagttatttat 43554493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 54898352 - 54898229
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| |||||||||||||||||||  |||||| ||||||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  54898352 tactccctctgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactatcactttcaaagttcaatgcaacattaaatgttgtttta 54898253  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  54898252 ccaatattatccttagttatttat 54898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 27484047 - 27483929
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||| |||||| |||||| |||| ||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  27484047 cctccgttcctttttaagtgttactttttaagaaagtttttgttcctatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaat 27483948  T
Q  216 attatcctcagttatttat 234  Q
    ||| |||| ||||||||||    
T  27483947 attgtccttagttatttat 27483929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 48214045 - 48214170
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||||||||||||||  ||||||  ||||||   |||||||||||||||| ||||| |||||||| ||||||||||||||    
T  48214045 agtactccctccgttcctttttaagtgtcacttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttt 48214144  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||| ||| ||||||||||    
T  48214145 taccaatattacccttagttatttat 48214170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 20105172 - 20105295
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||||||||  |||||||||| ||||   ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  20105172 tactacctccgttcctttttaagtgtcacttttggagaaaatttttgttcctctttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 20105271  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  20105272 ccaatattgtccttagttatttat 20105295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 28885658 - 28885781
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||||||  |||||||||||| ||||| |||||| |||| ||||  ||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  28885658 tactccttccgttcatttttaagtgtctcttttgaagaaattttttgttcctatttaaccgtcacttttaaagttcaatgcaacattaaatgttgtttta 28885757  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  28885758 ccaatattatccttagttatttat 28885781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 48151966 - 48152088
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||||| |||||||||||||||||||  ||||||  ||||||   |||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  48151966 actccctccgttcctttttaagtgtcacttttggagaaaaaatttgtttcaatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttac 48152065  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| ||||||||||    
T  48152066 caatattacccttagttatttat 48152088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 36234347 - 36234468
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||| |||||||||||| | |||||||||||  | || |||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  36234347 tactccctccgttcctttgtaagtgtcacttatgaagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgtttta 36234446  T
Q  211 ccaatattatcctcagttattt 232  Q
    ||||||||||||| ||||||||    
T  36234447 ccaatattatccttagttattt 36234468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 17102734 - 17102857
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  |||||||||||| |||||  ||||| |||| ||||  |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  17102734 tactccctccgttcttttttaagtgtctcttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgtttta 17102833  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  17102834 ccaatattatccttagttatttat 17102857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 42672156 - 42672033
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || ||||||||| |||| ||||  |||||||||| ||||  ||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  42672156 tactccctccattcctttttaagcgtcatttttggagaaaatttttgttcctattcaactgtcacttttaaagttcaatgtaatattaaatgttgtttta 42672057  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  42672056 ccaatattgtccttagttatttat 42672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 47104421 - 47104298
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  47104421 tactccctccgttcctttttaattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 47104322  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | || |||||||    
T  47104321 ccaatattatcattagatatttat 47104298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 39867114 - 39866992
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| |||||| ||||||||||||| |||||  ||||  |||| |||  |||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  39867114 tactccatccgttcctttttaagtgtctcttttggagaatttttttttcctatttaactgtcacttttaaagttcaatgcaacattaaatgttgatttac 39867015  T
Q  212 caatattatcctcagttatttat 234  Q
    ||||||||| || ||||||||||    
T  39867014 caatattattcttagttatttat 39866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 33491398 - 33491282
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||    
T  33491398 tccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgttactttcaaagttcaatgcaacattaaatgttgttttaccaatat 33491299  T
Q  218 tatcctcagttatttat 234  Q
    |||||| | ||||||||    
T  33491298 tatccttaattatttat 33491282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 44092295 - 44092183
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| |||||||| ||||||||||  |||| ||||||||||  |||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  44092295 tactacctctgttcctttttaattgtcacttttagagaagaattttgttcatatttaactgttacttttaaagttcaatgcaacattaaatgttgtttta 44092196  T
Q  211 ccaatattatcct 223  Q
    |||||||||||||    
T  44092195 ccaatattatcct 44092183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 46973400 - 46973526
Alignment:
Q  112 tactccctccgtttctttttaagtgtc---acttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    ||||||||||||| |||||||||||||   ||||||  |||||| ||||||||| |||||||||||||||| ||||| |||| ||| || ||||||| ||    
T  46973400 tactccctccgttcctttttaagtgtcttcacttttggagaaaaattttgttcttatttaactgtcactttcaaagttcaatacaacatcaaatgttatt 46973499  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||||||||    
T  46973500 ttaccaatattatccttagttatttat 46973526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 3376574 - 3376451
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||||||||||||| ||||| |||| ||| ||||||   |||||||||||| ||| ||||| |||||||| |||||||||| |||||    
T  3376574 tactccctctgttcctttttaagtgtctcttttaaagataatatttgtttctatttaactgtcagtttcaaagtccaatgcaacattaaatgttatttta 3376475  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  3376474 ccaatattatccttagttatttat 3376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 7328435 - 7328558
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| ||||||||||||| |||||  ||||| |||| ||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  7328435 tactccttccgttcctttttaagtgtctcttttggagaaattttttgttcctatttaactatcactttcaaagttcaatgcaacattaaatgttgtttta 7328534  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| ||||||||||    
T  7328535 ctaatattatccttagttatttat 7328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 47070123 - 47070000
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || ||||||||||||||||||   ||||| |||| ||||  ||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  47070123 tactccctccattcctttttaagtgtcactttcgtagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttta 47070024  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  47070023 ccaatattgtccttagttatttat 47070000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 43775655 - 43775533
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||| || ||| |||||||| |||| ||||| |||||| |||| ||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||||    
T  43775655 actccttctgttcctttttaactgtctcttttgaagaaattttttgttttcatttaactgtcactttcaaagttcaatgcaacattaaatattgttttac 43775556  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| || |||||||    
T  43775555 caatattatccttagctatttat 43775533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 45513883 - 45513758
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||| ||||||||  ||||||||||| ||||||  ||||| |||| ||||  |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  45513883 agtacttcctccgttcttttttaagtgttacttttggagaaattttttgttcctatttaactgtcacttttaaagttcaatacaacattaaatgttgttt 45513784  T
Q  209 taccaatattatcctcagttatttat 234  Q
    || ||||||| |||| ||||||||||    
T  45513783 tatcaatattgtccttagttatttat 45513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 20848985 - 20848877
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||| ||| ||||||||||  ||||||  |||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  20848985 tactccctccgttcctttataattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 20848886  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  20848885 ccaatatta 20848877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 29697971 - 29698094
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| | ||||||||||||||||||| ||||  ||||| |||| ||||  |||||| ||||| ||| ||||| |||||||||||||||||||||||||    
T  29697971 tactccgttcgtttctttttaagtgtcattttttgagaaagtttttgttcctatttaattgtcattttcaaagttcaatgcaatattaaatgttgtttta 29698070  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| |||| ||||||||||    
T  29698071 tcaatattgtccttagttatttat 29698094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 45145151 - 45145221
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||| |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  45145151 ttttattcttatttaactgtcactttcaaagttcaatgcaatattaaatgttgttttaccaatattatcct 45145221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 45101586 - 45101501
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||  |||||||||||||||| ||||| | ||| || ||||||||||||||||||||||||||||| ||||||||||    
T  45101586 aaaattttgttcctatttaactgtcactttgaaagttccatgaaacattaaatgttgttttaccaatattatccttagttatttat 45101501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 51219308 - 51219227
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  51219308 ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattatccttagttatttat 51219227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 44544444 - 44544312
Alignment:
Q  103 actaataagtactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaat 201  Q
    |||||||| ||||| || |||| ||||||||||||| ||||| || ||||   |||||   |||||||||||||||| ||| | |||||||| |||||||    
T  44544444 actaataaatactctcttcgttcctttttaagtgtctcttttgaaaaaaaaaattgtttctatttaactgtcactttcaaaattcaatgcaacattaaat 44544345  T
Q  202 gttgttttaccaatattatcctcagttatttat 234  Q
    ||| |||||||||||||||||| ||||||||||    
T  44544344 gttattttaccaatattatccttagttatttat 44544312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 52627504 - 52627380
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaa-gtacaatgcaatattaaatgttgtttt 209  Q
    |||||| |||||| |||||||||||||||||||  ||||  ||||  | || |||||| ||||||||||||| || |||||||| |||||||||||||||    
T  52627504 tactccttccgttcctttttaagtgtcacttttggagaagttttttgtttctatttaattgtcacttttaaaagttcaatgcaacattaaatgttgtttt 52627405  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||||||||| |||| ||||||||||    
T  52627404 accaatattgtccttagttatttat 52627380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 13158700 - 13158582
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatt--ttgttctcatttaactgtcactttt-aaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||| ||||||||||||||||||| |||||||    |||||   |||||||||||| |||| ||||| |||||||| |||||||||||||||||||||    
T  13158700 tccgttcctttttaagtgtcacttttgaagaaaaaaaattgtttctatttaactgtcatttttcaaagttcaatgcaacattaaatgttgttttaccaat 13158601  T
Q  216 attatcctcagttatttat 234  Q
    || ||||| ||||||||||    
T  13158600 ataatccttagttatttat 13158582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 19550226 - 19550349
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||| ||| ||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  19550226 tactccatccgttcctttttaaatgttacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaaaattaaatgttgtttta 19550325  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| | || ||||||||||    
T  19550326 tcaatattgttcttagttatttat 19550349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 34266704 - 34266581
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| |||  | ||||||||||||||||  ||||||||||  | || |||||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  34266704 tactccctctgttcttctttaagtgtcacttttggagaaaatttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttta 34266605  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| |||| ||||||||||    
T  34266604 tcaatattgtccttagttatttat 34266581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 41168741 - 41168864
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| ||||||||||||||||| | ||| ||||  ||||||  |||||||||||| ||| ||| | |||||||| | ||||||||||||||    
T  41168741 tactccatccgttcctttttaagtgtcacttctgcaaaaaaaaattgttcctatttaactgtcattttcaaacttcaatgcaacaataaatgttgtttta 41168840  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | ||||||||||    
T  41168841 ccaatattatctttagttatttat 41168864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 50091930 - 50092048
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||| | ||||  ||||| |||| ||||  | |||||||||||||| ||||| |||||||| | |||||||||||||||||||    
T  50091930 cctccgttcctttttaagtgttatttttggagaaactttttgttcctacttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaat 50092029  T
Q  216 attatcctcagttatttat 234  Q
    ||| |||| ||||||||||    
T  50092030 attttccttagttatttat 50092048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 55141732 - 55141619
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    ||||||||||||||||||||||||||  ||||||||||  | ||| |||||||    |||| ||||| |||||||| |||||||||||||||||||||||    
T  55141732 tccgtttctttttaagtgtcacttttggagaaaatttttgtttcaatttaactc---ctttcaaagttcaatgcaacattaaatgttgttttaccaatat 55141636  T
Q  218 tatcctcagttatttat 234  Q
    || ||| ||||||||||    
T  55141635 tacccttagttatttat 55141619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 33874817 - 33874689
Alignment:
Q  107 ataagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg 205  Q
    |||| ||||||| ||||| |||||||  ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||  ||    
T  33874817 ataattactcccaccgttcctttttatctgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatagtg 33874718  T
Q  206 ttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| ||| || |||||||    
T  33874717 ttttaccaatattacccttagatatttat 33874689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 25983868 - 25983805
Alignment:
Q  171 gtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  25983868 gtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttat 25983805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 27039867 - 27039764
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||| ||| ||||||||||||||||||   |||||||||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||||||     
T  27039867 cctctgttcctttttaagtgtcactttaggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaac 27039768  T
Q  216 atta 219  Q
    ||||    
T  27039767 atta 27039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 41351461 - 41351350
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcactttta-aagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||  ||||||||||||||||||  ||||| |||| ||||  |||||||||||||||||  |||| |||||||  ||||||| |||||||    
T  41351461 tactccctccgttcttttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttttgaagttcaatgcatcattaaatattgtttt 41351362  T
Q  210 accaatattatc 221  Q
    ||||||||||||    
T  41351361 accaatattatc 41351350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 52175698 - 52175810
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaaga---aaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||| ||||| |||| ||| ||||||||||  |||   ||| |||||||  |||||||||||||||| ||||| |||||||| | ||||||||||||    
T  52175698 tactcccaccgttcctttctaactgtcacttttagagagagaaaatttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttt 52175797  T
Q  209 taccaatattatc 221  Q
    |||||||||||||    
T  52175798 taccaatattatc 52175810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 51064861 - 51064986
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||| ||||| ||||  ||||  |||| ||||    |||||||||||||| ||||| |||| |||||||||||||| ||     
T  51064861 agtactccctccgttcctttttaattgtcatttttggagaatttttttgttcctgattaactgtcactttcaaagttcaatacaatattaaatgttatta 51064960  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||||||| || |||||||    
T  51064961 taccaatattatccttagatatttat 51064986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 52173726 - 52173835
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||| ||| ||||||||||  |||||||   ||||||  |||||||||||||||| ||||| |||||||| | |||||||||||||    
T  52173726 tactccctccgttcctttctaactgtcacttttagaagaaaaaaattgttcatatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 52173825  T
Q  210 accaatatta 219  Q
    ||||||||||    
T  52173826 accaatatta 52173835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 11473389 - 11473505
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||| ||||||||||  ||||| |||| ||||   ||||||| ||||||| ||||| |||||||| | |||||||||||||||||| ||    
T  11473389 tccgttcctttttaaatgtcacttttggagaaattttttgttcctgtttaactttcactttcaaagttcaatgcaacaataaatgttgttttaccaacat 11473488  T
Q  218 tatcctcagttatttat 234  Q
    || ||| ||||||||||    
T  11473489 tacccttagttatttat 11473505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 29651667 - 29651771
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||||||||  |||||||||| ||| | ||||||||||    || ||||| |||||||| |||||||||| ||||| |||||||||||| |    
T  29651667 tttttaagtgtcacttttggagaaaatttttgtttttatttaactgt----ttcaaagttcaatgcaacattaaatgttattttatcaatattatcctta 29651762  T
Q  226 gttatttat 234  Q
    |||||||||    
T  29651763 gttatttat 29651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 51697778 - 51697707
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||| |||| ||||||||||    
T  51697778 atttaactgtcactttcaaagttcaatgtaacattaaatgttgttttacgaatattgtccttagttatttat 51697707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 52663422 - 52663545
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||  ||||||||||||| ||||  ||||| |||| |||   |||||| ||||| ||| ||||| ||| ||||||||||| |||||||||    
T  52663422 tactctctccgttcatttttaagtgtcagttttggagaaattttttgttactatttaattgtcattttcaaagttcaaagcaatattaaacgttgtttta 52663521  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  52663522 ccaatattgtccttagttatttat 52663545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2154310 - 2154197
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc------aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg 205  Q
    |||||| ||||||||||||||| ||||||||||       || ||||| ||||||  |||||||||||||||| ||||| |||||||| |||||||||||    
T  2154310 tactccttccgtttctttttaattgtcacttttagaagaaaaaaaaatattgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttg 2154211  T
Q  206 ttttaccaatatta 219  Q
    | ||| ||||||||    
T  2154210 tcttatcaatatta 2154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 5244196 - 5244078
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||| ||| ||||||| ||||||||||   | |||||||| ||||  |||||||| ||||||| ||||| |||||||| | ||||||||||||||||||     
T  5244196 cctctgttcctttttacgtgtcactttcggataaaatttttgttcctatttaactatcactttcaaagttcaatgcaacaataaatgttgttttaccaac 5244097  T
Q  216 attatcctcagttatttat 234  Q
    |||| ||| ||||||||||    
T  5244096 attacccttagttatttat 5244078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 24276 - 24220
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatc 221  Q
    ||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||    
T  24276 ttaactgtcactttcgaagttcaatgcaacattaaatgttgttttaccaatattatc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 35315123 - 35315235
Alignment:
Q  123 tttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatc 221  Q
    ||||||||||||||||  |||| |||||  |||| || || |||||| ||||| ||| ||||| |||| |||  ||||||||||||||||||||||||||    
T  35315123 tttctttttaagtgtctttttttaagaatttttttttttctatttaattgtcattttcaaagttcaatacaaccttaaatgttgttttaccaatattatc 35315222  T
Q  222 ctcagttatttat 234  Q
     | ||||||||||    
T  35315223 tttagttatttat 35315235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 3643448 - 3643339
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt--gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||| ||||||||||  ||||| ||||  ||||  |||||||||||||||| ||||| ||||||||  ||||||||||||||| |||||||| |||    
T  3643448 ctttttaattgtcacttttagagaaatttttttgttcctatttaactgtcactttcaaagttcaatgcaa-cttaaatgttgttttatcaatattaccct 3643350  T
Q  224 cagttatttat 234  Q
     || |||||||    
T  3643349 tagatatttat 3643339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32854213 - 32854091
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || ||||||| || ||||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||| || | ||||||||||||||    
T  32854213 tactccctccattcctttttaggt-tcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacaataaatgttgtttta 32854115  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||| |||| ||| ||||||||||    
T  32854114 tcaacattacccttagttatttat 32854091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 54334397 - 54334326
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| | |||||||||||||||||| |||| ||| | ||||||||    
T  54334397 atttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacccttatttatttat 54334326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 27992289 - 27992343
Alignment:
Q  180 aaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  27992289 aaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 27992343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 40010913 - 40010807
Alignment:
Q  129 tttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagt 227  Q
    |||||||||||||||   |||||| ||||||||  |||||||| ||| ||| ||||| |||||||| | |||||||||||||||| | |||| ||| |||    
T  40010913 tttaagtgtcactttaagagaaaaattttgttcatatttaactttcattttcaaagttcaatgcaacaataaatgttgttttaccgacattacccttagt 40010814  T
Q  228 tatttat 234  Q
    |||||||    
T  40010813 tatttat 40010807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 41926671 - 41926780
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatt--ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    |||||||||||| ||||| |||||||    ||||||  |||||||| ||||||| |||||   ||| || ||||||||||||||||||||||||||| |     
T  41926671 tttttaagtgtctcttttgaagaaaaaaaattgttcctatttaactatcactttcaaagtttcatgtaacattaaatgttgttttaccaatattatcgtt 41926770  T
Q  225 agttatttat 234  Q
    ||||||||||    
T  41926771 agttatttat 41926780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 23771267 - 23771368
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||| ||||||||||  | ||||||||  | || | |||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  23771267 tacttcctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatattgtttta 23771366  T
Q  211 cc 212  Q
    ||    
T  23771367 cc 23771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 30861793 - 30861685
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||||||||  ||||| ||||  |||  |||||||||||| | | ||||| |||||||| | |||||||||||||||||| |||| ||| |    
T  30861793 tttttaagtgtcacttttggagaaattttttattcctatttaactgtcattatcaaagttcaatgcaacaataaatgttgttttaccaacattaccctta 30861694  T
Q  226 gttatttat 234  Q
    | |||||||    
T  30861693 gctatttat 30861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 42515386 - 42515338
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  42515386 atttaactgtcactttcaaagttcaatgcaacattaaatgttgttttac 42515338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 47844106 - 47844006
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||| ||| ||||||||||  | ||| ||||  | || | |||||||||||||| ||||| ||||| |||||||||||||||||    
T  47844106 agtactccctccgttcctttataactgtcacttttacataaattttttatttctaattaactgtcactttcaaagttcaatgtaatattaaatgttgttt 47844007  T
Q  209 t 209  Q
    |    
T  47844006 t 47844006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 2642744 - 2642791
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  2642744 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 2642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 27028229 - 27028158
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| | ||||| |||||||||||| |||| |||  |||||||||    
T  27028229 atttaactgtcactttcaaagttcaatgcaacaataaatattgttttaccaacattacccttggttatttat 27028158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 32980620 - 32980743
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  |||||||||||| |||||  ||||  ||||  | || |||||||||||||||| ||| | |||| ||| |||||||  |||||||    
T  32980620 tactccctccgttcttttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaaattcaatacaacattaaataatgtttta 32980719  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| ||||||||||    
T  32980720 tcaatattacccttagttatttat 32980743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 22100089 - 22099967
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||| ||||||| ||||||||| || |||||  |||||||||| ||| | |||||||||| | |||  |||| |||||||| ||||||| ||  |||||    
T  22100089 actccatccgtttatttttaagtatctcttttggagaaaatttttgtttttatttaactgttattttcgaagttcaatgcaacattaaatattactttac 22099990  T
Q  212 caatattatcctcagttatttat 234  Q
     ||||||||||| | ||||||||    
T  22099989 taatattatccttacttatttat 22099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 24981272 - 24981393
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||| || ||||||||||||||||||  |||||| ||||  | |||   |||| ||||||| ||||| | |||||| ||||||| ||||||    
T  24981272 aagtactccctccattcctttttaagtgtcactttg-aagaaattttttgt-tcaa--aactatcactttcaaagttcgatgcaacattaaatattgttt 24981367  T
Q  209 taccaatattatcctcagttatttat 234  Q
    |||||||||| || | ||||||||||    
T  24981368 taccaatattgtctttagttatttat 24981393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 29803630 - 29803708
Alignment:
Q  127 tttttaagtgtcacttttcaag-aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgtt 204  Q
    ||||||||||||||||||  || |||| |||||||  |||||| ||||||||| ||||| |||||||| ||||||||||    
T  29803630 tttttaagtgtcacttttggagaaaaaatttgttcatatttaattgtcactttcaaagttcaatgcaacattaaatgtt 29803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 35077364 - 35077490
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||| |||| ||| ||||||||||  ||||  ||||  | || | |||||||||||||| ||||| ||||| || |||||||||||||    
T  35077364 aagtactccctccgttcctttataactgtcacttttacagaatttttttgtttctaattaactgtcactttcaaagttcaatgtaacattaaatgttgtt 35077463  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    || || ||| | |||| ||| ||||||    
T  35077464 tttcctataatgtccttagtaatttat 35077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 42634561 - 42634503
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatc 221  Q
    ||||||||||||||||| |||| || ||||||||||||| ||||||||  |||||||||    
T  42634561 atttaactgtcacttttgaagttcagtgcaatattaaatattgttttataaatattatc 42634503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 26748329 - 26748441
Alignment:
Q  108 taagtactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgt 206  Q
    ||||||||||||||||| |||| ||| |||||||||| ||   ||| |||||| ||| |||||||||  ||| ||||| ||||| |  ||||||||| ||    
T  26748329 taagtactccctccgttcctttataattgtcacttttgcatacaaaatttgttttcaattaactgtcgttttcaaagtccaatgtatcattaaatgtggt 26748428  T
Q  207 tttaccaatatta 219  Q
    |||||| ||||||    
T  26748429 tttacctatatta 26748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 29803727 - 29803763
Alignment:
Q  198 aaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29803727 aaatgttgttttaccaatattatccttagttatttat 29803763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 43159974 - 43159918
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||| ||| | |||||||| ||||||||||| |||| ||||||||    
T  43159974 atttaactgtcactttcaaaattcaatgcaacattaaatgttgatttatcaatatta 43159918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 45055167 - 45055277
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt--gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||  ||||||||||||  |||| |||||  ||||  ||||  ||||||| |||||||| |||||  ||||||  |||||||||||||||    
T  45055167 tactccctccgttcatttttaagtgtctattttgaagaattttttttgttccaatttaac-gtcactttcaaagtttaatgcatcattaaatgttgtttt 45055265  T
Q  210 accaatattatc 221  Q
    || |||||||||    
T  45055266 actaatattatc 45055277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 54911515 - 54911459
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||| ||||| ||||| || |||||||| ||||||| ||||||||    
T  54911515 atttaactgtcactttcaaagttcaatgtaacattaaatgatgttttatcaatatta 54911459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 6902310 - 6902381
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||| |||||||||| ||||  || ||||||| |||||||| ||||||| | || ||||||||||    
T  6902310 atttaactgtcccttttaaagttcaatttaacattaaattttgttttatcaatattgttcttagttatttat 6902381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 40113470 - 40113415
Alignment:
Q  154 tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||| ||| |||||||||||||| ||||| ||||| || |||||||||||||||    
T  40113470 tttgttttcaattaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 40113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 49168396 - 49168467
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||||| ||||||||| |||||||| | ||||| |||||||||||| ||||  || ||||||||||    
T  49168396 atttaattgtcaattttaaagttcaatgcaacaataaatattgttttaccaacattactcttagttatttat 49168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 41425609 - 41425718
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| ||||||||||||| |||||  ||||   ||||||||  |||||| |||||||||  | ||| |||||||| ||||||||||  |||    
T  41425609 tactccctccgttcctttttaagtgtctcttttggagaatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgttacttt 41425708  T
Q  210 accaatatta 219  Q
    || |||||||    
T  41425709 actaatatta 41425718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 28226461 - 28226505
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| ||||| || |||||||||||||||    
T  28226461 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 28226505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 33074543 - 33074435
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || | ||||||||||| ||||| |||||  |||| |||  |||||| | |||||||  | ||| |||||||| |||||||||| |||||    
T  33074543 tactccctccattccattttaagtgtctcttttaaagaattttttattcctatttaagtatcactttacatagttcaatgcaacattaaatgttatttta 33074444  T
Q  211 ccaatatta 219  Q
    | |||||||    
T  33074443 ctaatatta 33074435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 43945442 - 43945482
Alignment:
Q  194 tattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||| ||||||| |||| ||||||||||    
T  43945442 tattaaatgttgttttatcaatattgtccttagttatttat 43945482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 35531552 - 35531429
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  35531552 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 35531453  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  35531452 ccaatattatccttagttatttat 35531429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 49908439 - 49908316
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||   |||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  49908439 tactccctccgttcctttttaagtgtcacttttaaagaaaaattttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatattgtttta 49908340  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  49908339 ccaatattatccttagttatttat 49908316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 21927953 - 21927830
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  21927953 tactccctccgttcctttttaagtgtcacttttgcagaaattttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttatttta 21927854  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  21927853 ccaatattatccttagttatttat 21927830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 50825829 - 50825706
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||| ||||| | |||||||||||||| |||||  ||||||||||||||||||||||||    
T  50825829 tactccctccgttcctttttaagtgtctcttttgaagaaattttttgttcttacttaactgtcactttcaaagtttaatgcaatattaaatgttgtttta 50825730  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  50825729 ccaatattatccttagttatttat 50825706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 28678998 - 28679124
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||||||||||||||| ||||| |||||||| |||||||||||||    
T  28678998 aagtactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcttgtttaactgtcactttcaaagttcaatgcaacattaaatgttgtt 28679097  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||||||| || | ||||||||||    
T  28679098 ttaccaatattgtctttagttatttat 28679124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 10675882 - 10676005
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  |||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  10675882 tactccctccgttcttttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 10675981  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  10675982 ccaatattatcctaagttatttat 10676005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 37609558 - 37609435
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||||| ||||||||  |||||||||||||||    
T  37609558 tactctctccgttcctttttaagtgtcacttttggagaaaatttttgttcttatttaactgtcattttcaaagttcaatgcaacgttaaatgttgtttta 37609459  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  37609458 ccaatattatccttagttatttat 37609435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32994730 - 32994603
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa---attt--tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgt 206  Q
    ||||||||||||| ||||||||||||| ||||| ||||||   ||||  |||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  32994730 tactccctccgttcctttttaagtgtctcttttaaagaaattaatttgttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgt 32994631  T
Q  207 tttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||| ||||||||||    
T  32994630 tttaccaatattatccttagttatttat 32994603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 1429264 - 1429387
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||| ||||||||||||||  |||||||||| ||||  |||||||||||||||||||||| || ||||| ||||||||||||||||    
T  1429264 tactccctccgttcttttctaagtgtcacttttggagaaaatttttgttcctatttaactgtcacttttaaagttcattgcaacattaaatgttgtttta 1429363  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  1429364 ccaatattgtccttagttatttat 1429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31588996 - 31588873
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||||  | || |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  31588996 tactccctccgttcctttttaagtgtcatttttagagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttatttta 31588897  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  31588896 ccaatattatccttagttatttat 31588873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 8464706 - 8464585
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  8464706 tactccctccgttcgtttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 8464607  T
Q  211 ccaatattatcctcagttattt 232  Q
    |||||||| |||| ||||||||    
T  8464606 ccaatattgtccttagttattt 8464585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 9361951 - 9362076
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||||||||| |||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||    
T  9361951 agtactccctccgttcctttttaagtgtcatttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttt 9362050  T
Q  209 taccaatattatcctcagttatttat 234  Q
    |||||| |||| ||| ||||||||||    
T  9362051 taccaacattacccttagttatttat 9362076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 43500500 - 43500609
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    |||||||||||||| ||||  ||||||| |||||||  |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||     
T  43500500 ctttttaagtgtcatttttggagaaaatatttgttcctatttaagtgtcacttttaaagttcaatgcagtattaaatgttgttttaccaatattatcctt 43500599  T
Q  225 agttatttat 234  Q
    ||||||||||    
T  43500600 agttatttat 43500609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 35484021 - 35483913
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||| ||||  |||||||||| ||||  |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |    
T  35484021 tttttaagtgtcatttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgtaatattaaatgttgttttaccaatattatcctta 35483922  T
Q  226 gttatttat 234  Q
    |||||||||    
T  35483921 gttatttat 35483913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13507750 - 13507873
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||  ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  13507750 tactccctaagttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgtttta 13507849  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  13507850 ccaatattatccttagttatttat 13507873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13514938 - 13515061
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||  ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  13514938 tactccctaagttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgtttta 13515037  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  13515038 ccaatattatccttagttatttat 13515061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 30686391 - 30686514
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||  ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  30686391 tactccctatgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 30686490  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  30686491 ccaatattgtccttagttatttat 30686514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 38648437 - 38648560
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| ||||| || |||||||| ||||||||||  |||||| ||||||||  |||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  38648437 tacttcctccattcctttttaaatgtcactttttgagaaaaattttgttcctatttaactgtcactttcaaacttcaatgcaacattaaatgttgtttta 38648536  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  38648537 ccaatattatccttagttatttat 38648560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 44182740 - 44182863
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  ||||||  ||||||   |||||||||||||| | ||||| |||||||| ||||||||||||||||    
T  44182740 tactccctccgttcctttttaagtgtcaattttggagaaaaaatttgtttctatttaactgtcactctcaaagttcaatgcaacattaaatgttgtttta 44182839  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  44182840 ccaatattatccttagttatttat 44182863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 52748997 - 52749120
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||| ||||  |||| ||||||||||| ||||| ||||||||||||||||| |||| ||    
T  52748997 tactccctccgtttctttttaaatgtcatttttgaagaaattttttgttcctatttgactgtcactttcaaagttcaatgcaatattaaatgatgttata 52749096  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  52749097 tcaatattatccttagttatttat 52749120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 32347963 - 32348081
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||||||||||  |||||| |||||||   ||||||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  32347963 cctccgttcctttttaagtgtcacttttggagaaaaattttgtttcaatttaactgccactttcaaagttcaatgcaacattaaatgttgttttaccaat 32348062  T
Q  216 attatcctcagttatttat 234  Q
    |||| ||| ||||||||||    
T  32348063 attacccttagttatttat 32348081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 43952773 - 43952891
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    ||||||||||||||||||||||| ||||  ||||| |||| ||||| |||||||||||||||| ||||| ||||| || ||||||||||||||||| |||    
T  43952773 cctccgtttctttttaagtgtcatttttggagaaattttttgttcttatttaactgtcactttcaaagttcaatgaaacattaaatgttgttttacaaat 43952872  T
Q  216 attatcctcagttatttat 234  Q
    |||||| | ||||||||||    
T  43952873 attatctttagttatttat 43952891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 45226829 - 45226711
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  45226829 cctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaat 45226730  T
Q  216 attatcctcagttatttat 234  Q
    ||| |||| ||||||||||    
T  45226729 attgtccttagttatttat 45226711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 19093251 - 19093367
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    |||||||||| |||||||||||||||||||  |||||| ||||||||  ||||| |||||||||| ||||| |||||||| ||||||| || ||||||||    
T  19093251 tccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttacctgtcactttcaaagttcaatgcaacattaaatattattttacca 19093350  T
Q  214 atattatcctcagttat 230  Q
    |||||||||| ||||||    
T  19093351 atattatccttagttat 19093367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 20605882 - 20605758
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||| ||||||||| ||||||||||||| ||||  |||||| ||||||||| ||| |||||||||||| ||| | |||||||| |||||||||||||||    
T  20605882 gtacttcctccgtttttttttaagtgtcatttttggagaaaaattttgttcttattaaactgtcactttcaaacttcaatgcaacattaaatgttgtttt 20605783  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||| |  |||||||||    
T  20605782 accaatattatcattggttatttat 20605758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 35255473 - 35255589
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||||||||||| ||||| |||||| |||| ||||  |||||| ||||||||| ||||| |||||||| ||||||||||| |||||||||||    
T  35255473 tccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgatttaccaatat 35255572  T
Q  218 tatcctcagttatttat 234  Q
    |||||| ||||||||||    
T  35255573 tatccttagttatttat 35255589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 15660567 - 15660690
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||||||||| ||||  ||||| |||||||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  15660567 tactctctccgttcctttttaagtgtcatttttggagaaatattttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 15660666  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  15660667 ccaacattacccttagttatttat 15660690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18344306 - 18344429
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||  | ||| ||||| ||||| ||||||| | ||||| || ||||||||||||||||    
T  18344306 tactccctccgtttctttttaagtgtctcttttaacgaaaatttttgtttcaatttaagtgtcaattttaaaattcaatgtaacattaaatgttgtttta 18344405  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| ||||||||||    
T  18344406 ccaatattacccttagttatttat 18344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 19929723 - 19929600
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||||||| |||||  ||||| |||| ||||  ||||||| |||||||| ||||| |||||||  ||||||||||||||||    
T  19929723 tactccctccgtttctttttaagtgtctcttttggagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcatcattaaatgttgtttta 19929624  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||||| ||  |||||||||    
T  19929623 ccaatattattctttgttatttat 19929600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 35700632 - 35700509
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  || ||||  ||||||  |||||||||||||||| ||| | ||||||||  |||||||||||||||    
T  35700632 tactccctccgtttctttttaagtgtcacttttggaaaaaaaaattgttccaatttaactgtcactttcaaaattcaatgcaactttaaatgttgtttta 35700533  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| ||||||||||    
T  35700532 tcaatattacccttagttatttat 35700509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 1427660 - 1427782
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||| | |||||||||||| | ||||  ||||| ||||||||| |||||||||||| ||| ||||  |||||||| | |||||||||||||||    
T  1427660 tactccctccgatcctttttaagtgttattttttgagaaatttttgttcttatttaactgtcattttcaaaggtcaatgcaacaataaatgttgttttac 1427759  T
Q  212 caatattatcctcagttatttat 234  Q
    ||| |||||||| ||||||||||    
T  1427760 caacattatccttagttatttat 1427782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 19455655 - 19455533
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||| ||| |||| ||||||||||||||  ||||| |||||||   |||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  19455655 tactccctctgttcctttataagtgtcacttttggagaaatttttgtttcaatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttac 19455556  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| | ||||||||    
T  19455555 caatattacccttaattatttat 19455533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 44818440 - 44818557
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||| ||||||||| |||||||||  ||||||| |||||||  |||||||| ||| ||| ||||| |||||||| ||||||| ||||||||||||||    
T  44818440 ctccgttcctttttaagcgtcacttttgcagaaaatctttgttcctatttaactttcattttcaaagttcaatgcaacattaaatattgttttaccaata 44818539  T
Q  217 ttatcctcagttatttat 234  Q
    ||||||| ||||||||||    
T  44818540 ttatccttagttatttat 44818557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 13566656 - 13566768
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  |||||| |||| || | ||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  13566656 tactccctccgttcctttttaagtgtcattttttgagaaaaattttatttttatttaaccgtcactttcaaagttcaatgcaacattaaatgttgtttta 13566755  T
Q  211 ccaatattatcct 223  Q
    |||||||| ||||    
T  13566756 ccaatattgtcct 13566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 19349633 - 19349513
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    |||||||||| |||||||| |||||||||   |||||| ||||||||  ||||||| |||||||| |||||  ||||||| |||||||||||||||||||    
T  19349633 tccctccgttcctttttaaatgtcactttcggagaaaaattttgttcctatttaacagtcactttcaaagttgaatgcaacattaaatgttgttttacca 19349534  T
Q  214 atattatcctcagttatttat 234  Q
    ||||| |||| ||||||||||    
T  19349533 atattgtccttagttatttat 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 18034083 - 18033960
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||||||||  ||||| ||||  |||  |||||||||||||||| ||||| |||| ||| ||||||| ||||||||    
T  18034083 tactccatccgttcctttttaagtgtcactttttgagaaattttttattcctatttaactgtcactttcaaagttcaatccaacattaaatattgtttta 18033984  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  18033983 tcaatattatccttagttatttat 18033960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31570894 - 31570771
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  ||||| |||| ||||  ||||||||||||||||  |||| |||||||| ||||||| || |||||    
T  31570894 tactccctccgttcctttttaagtgtctcttttggagaaattttttgttcatatttaactgtcactttcgaagttcaatgcaacattaaatattatttta 31570795  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  31570794 ccaatattatccttacttatttat 31570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 35605437 - 35605555
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||| ||||||||  |||||||||||||||||| |||||| |||| |||   |||||||||||||||| ||| |  ||||||| |||||||||||||||    
T  35605437 gtacttcctccgttgatttttaagtgtcacttttgaagaaattttttgtttaaatttaactgtcactttcaaaatttaatgcaaaattaaatgttgtttt 35605536  T
Q  210 accaatattatcctcagtt 228  Q
    |||||||||||||| ||||    
T  35605537 accaatattatccttagtt 35605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 51974430 - 51974316
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||||||||| ||||  || ||||  |||||  ||||||||||||| |||  |||| |||||||||||||||| ||||||    
T  51974430 agtactccctccgttcctttttaagtgtcatttttttaaaaaaaaattgtttccatttaactgtcattttcgaagttcaatgcaatattaaatattgttt 51974331  T
Q  209 taccaatattatcct 223  Q
    |||||||||||||||    
T  51974330 taccaatattatcct 51974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 7782945 - 7783054
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctc 224  Q
    |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| |||| ||||||||||| ||||||| | ||     
T  7782945 ctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattagatgttgttttatcaatattgttctt 7783044  T
Q  225 agttatttat 234  Q
    ||||||||||    
T  7783045 agttatttat 7783054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 1039624 - 1039516
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||||| |||  ||||||  |||||||| |||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  1039624 tactccctccgttcctttttaattgtcacctttagagaaaaaatttgttcttatttaactgtcactttcaaagtttaatgcaacattaaatgttgtttta 1039525  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  1039524 ccaagatta 1039516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 1046530 - 1046422
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||||| |||  ||||||  |||||||| |||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  1046530 tactccctccgttcctttttaattgtcacctttagagaaaaaatttgttcttatttaactgtcactttcaaagtttaatgcaacattaaatgttgtttta 1046431  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  1046430 ccaagatta 1046422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 49497147 - 49497255
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    |||||||||||||||||| |||||  |||| ||||| |||||||||| | |||| |||| ||||| || |||||||||||||||||||||||| |||| |    
T  49497147 tttttaagtgtcacttttaaagaatttttttgttcttatttaactgttatttttgaagttcaatgaaacattaaatgttgttttaccaatattgtcctta 49497246  T
Q  226 gttatttat 234  Q
    |||||||||    
T  49497247 gttatttat 49497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 51613391 - 51613499
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||| ||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  51613391 tactccctccattcctttttaattgtcacttttagagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttta 51613490  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  51613491 tcaatatta 51613499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13699154 - 13699277
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| ||||||||||||| ||||| || ||| ||||  | || |||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  13699154 tactccatccgttcctttttaagtgtcgcttttgaataaattttttatttctatttaactgttactttcaaagttcaatgcaacattaaatgttgtttta 13699253  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | |||| |||||| ||||||||||    
T  13699254 cgaatactatccttagttatttat 13699277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32168569 - 32168446
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||||  | || |||||||||||| ||| ||||| |||||||  ||||||||||||||||    
T  32168569 tactccctccgttcctttttaattgtcacttttagagaaaatttttgtttctatttaactgtcagtttcaaagttcaatgcatcattaaatgttgtttta 32168470  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| || |||||||    
T  32168469 tcaatattacccttagatatttat 32168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 36318333 - 36318456
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||||||||  | ||| ||||  | || ||||||||||| |||| ||||| |||||||| ||||||||||||||||    
T  36318333 tacttcctccgttcctttttaagtgtcacttttagataaattttttgtttctatttaactgtcgctttcaaagttcaatgcaacattaaatgttgtttta 36318432  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| | ||||||||    
T  36318433 tcaatattatccttatttatttat 36318456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 45368068 - 45368191
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||| ||||||||||   |||||||||  | || ||||| |||||||||| ||||| ||||| || ||| ||||||||||||    
T  45368068 tactccctcctttcctttttaaatgtcacttttggggaaaatttttgtttctatttatctgtcactttcaaagttcaatgaaacattgaatgttgtttta 45368167  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  45368168 ccaatattatccttagttatttat 45368191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 1038071 - 1038176
Alignment:
Q  120 ccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaatat 217  Q
    ||||| |||||||| ||||||||||  ||||||  |||||||  |||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||    
T  1038071 ccgttcctttttaattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagtttaatgcaatattaaatgttgtttttaccaatat 1038170  T
Q  218 tatcct 223  Q
    ||||||    
T  1038171 tatcct 1038176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 1044977 - 1045082
Alignment:
Q  120 ccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaatat 217  Q
    ||||| |||||||| ||||||||||  ||||||  |||||||  |||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||    
T  1044977 ccgttcctttttaattgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagtttaatgcaatattaaatgttgtttttaccaatat 1045076  T
Q  218 tatcct 223  Q
    ||||||    
T  1045077 tatcct 1045082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 37437268 - 37437187
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| | || ||||||||||    
T  37437268 ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgttcttagttatttat 37437187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 37735396 - 37735288
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||||||| |||||||||| |||||||  |||||||  |||||||||||||| | ||||| |||||||| ||||||| ||||||||    
T  37735396 tactctctccgttcctttttaactgtcacttttaaagaaaaaatttgttcctatttaactgtcactgtcaaagttcaatgcaaaattaaatattgtttta 37735297  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  37735296 ccaacatta 37735288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 52649982 - 52649863
Alignment:
Q  116 ccctccgtttctttttaagtgtcacttttca-agaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    ||||||||| |||||||| |||| ||||||| |||||| |||||||   |||||| | ||||||| ||||| ||| ||||||||||||||||||||||||    
T  52649982 ccctccgttcctttttaaatgtc-cttttcatagaaaagttttgtttatatttaattatcactttcaaagttcaaagcaatattaaatgttgttttacca 52649884  T
Q  214 atattatcctcagttatttat 234  Q
    |||||| ||| ||||||||||    
T  52649883 atattacccttagttatttat 52649863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 1024536 - 1024659
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| ||||||||||||||||||| || ||||   || || | |||||||||| ||||| ||||| ||||| || ||||||||||||||||    
T  1024536 tactccttccgttcctttttaagtgtcacttttgaaaaaaaaaattatttttatttaactgttactttcaaagttcaatgtaacattaaatgttgtttta 1024635  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| || | ||||||||||    
T  1024636 ccaatattgtcgttagttatttat 1024659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 10506793 - 10506916
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| ||  |||| |||||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| ||||||||  ||||||||| |||||    
T  10506793 tactccctccattcattttaaagtgtcacttttggagaaattttttgttctaatttaactgtcactttcaaagttcaatgcaactttaaatgttatttta 10506892  T
Q  211 ccaatattatcctcagttatttat 234  Q
     | |||||| ||| ||||||||||    
T  10506893 tcgatattacccttagttatttat 10506916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 38597568 - 38597694
Alignment:
Q  110 agtactccctccgtttctttttaa-gtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    ||||||||||| ||| |||||||| |||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||| |||||    
T  38597568 agtactccctctgttcctttttaaagtgtcatttttggagaaacttttcgttcctatttaactgtcactttcaaagttcaatgcaacaataaatattgtt 38597667  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||| |||| ||| ||||||||||    
T  38597668 ttaccaacattacccttagttatttat 38597694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 30702505 - 30702424
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| | |||||| | ||||||| ||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  30702505 ttttgttttaatttaaatctcactttcaaagttcaatgcaacgttaaatgttgttttaccaatattatccttagttatttat 30702424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 37296983 - 37296859
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||||  |||||||||||| |||||  ||||| |||| ||||  ||||||||||||||||  |||| ||| |||| ||| ||| || ||||    
T  37296983 gtactccctccgttcgtttttaagtgtctcttttggagaaattttttgttcatatttaactgtcactttcgaagttcaacgcaacattgaatattatttt 37296884  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| | ||||||||    
T  37296883 accaatattatccttacttatttat 37296859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 17013454 - 17013525
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||| | | ||||||||    
T  17013454 atttaactgtcacttttgaagttcaatgcaacattaaatattgttttaccaatattatctttacttatttat 17013525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 51972538 - 51972415
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| | |||| ||||||||||||| ||||| |||||| |||| ||||| |||||| ||||||||| ||| | |||||||| || |||| || |||||    
T  51972538 tactccatacgttcctttttaagtgtctcttttgaagaaattttttgttcttatttaattgtcactttcaaaattcaatgcaacatgaaatattatttta 51972439  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| | || |||||||    
T  51972438 ccaatattatcattagctatttat 51972415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 3684777 - 3684876
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||||||||||||| ||||  |||| ||||   |||| |||| |||||||||| | ||||||| | |||||||||||||||||||||||||| ||||    
T  3684777 cctccgtttctttttaaatgtcttttttgaagat--tttttttcttatttaactgttatttttaaaattcaatgcaatattaaatgttgttttactaata 3684874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 4101124 - 4101058
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    ||||||||  |||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||    
T  4101124 ttttgttcctatttaactgtcacttttaaagttcaatgtagcattaaatgttgttttaccaatatta 4101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 42800091 - 42800199
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    ||||| ||||||||||||| ||||| ||||  ||||||  ||||||   |||||||||| ||||| ||| | ||||| ||||||||||||||||||||||    
T  42800091 tcccttcgtttctttttaattgtcattttttgagaaaagatttgtttatatttaactgttactttcaaatt-caatgtaatattaaatgttgttttacca 42800189  T
Q  214 atattatcct 223  Q
    ||||||||||    
T  42800190 atattatcct 42800199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 8008374 - 8008318
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||| ||||||||    
T  8008374 atttaactgtcacttttaaagatcaatacaatattaaatgttgttttatcaatatta 8008318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 12721428 - 12721523
Alignment:
Q  120 ccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaa 214  Q
    |||||||||||||| ||||||||||  ||||||   ||||||  |||||||| ||| ||| ||||| |||||||| ||||||||||||||||||||    
T  12721428 ccgtttctttttaattgtcacttttagagaaaaaaattgttcctatttaactatcattttcaaagttcaatgcaacattaaatgttgttttaccaa 12721523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 38818130 - 38818059
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||| | |||||||| | |||||||||||||| ||| |||| ||| ||||||||||    
T  38818130 atttaactgtcacttttaaaattcaatgcaacaataaatgttgttttagcaacattacccttagttatttat 38818059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 9127661 - 9127759
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    |||||||||||||||||||  | ||| |||| ||  | |||||| |||||||||  |||| |||||||||||||||||||||||| ||| |||||||||    
T  9127661 ctttttaagtgtcacttttggataaattttttgtgtttatttaattgtcactttcgaagttcaatgcaatattaaatgttgtttttccagtattatcct 9127759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 12124677 - 12124747
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||| ||||||||| ||||| |||||||| ||||||||||||||||| | |||| |||| ||||||||||    
T  12124677 tttaagtgtcactttcaaagttcaatgcaacattaaatgttgttttactagtattgtccttagttatttat 12124747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 24781917 - 24781868
Alignment:
Q  185 acaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  24781917 acaatgcaacattaaatgttgttttatcaatattatccttagttatttat 24781868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 43808892 - 43809002
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaatattatcct 223  Q
    |||||||| ||||||||||  ||||| |||| ||||  |||||||  ||||||| ||||| |||| ||| ||||||||||| |||||||||||||| |||    
T  43808892 ctttttaattgtcacttttggagaaattttttgttcctatttaaccatcactttcaaagttcaatacaacattaaatgttgtttttaccaatattaccct 43808991  T
Q  224 cagttatttat 234  Q
     || |||||||    
T  43808992 tagatatttat 43809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 42787481 - 42787420
Alignment:
Q  173 cacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||| | ||||| |||||||| |||| |||||||||||||||||| ||||||||||    
T  42787481 cactttcaaaattcaatggaatattaactgttcttttaccaatattatccttagttatttat 42787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 40927000 - 40926892
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||||||||||||| |||||  ||||  ||||  | || |||||||||||||||| ||||| |||||||| | |||| | |||||||    
T  40927000 tactccctctgttcctttttaagtgtctcttttggagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaacgatgtttta 40926901  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  40926900 tcaatatta 40926892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 1677262 - 1677301
Alignment:
Q  195 attaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  1677262 attaaatgttgttttaccaatattatccttaattatttat 1677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 12231244 - 12231205
Alignment:
Q  195 attaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  12231244 attaaatgttgttttaccaatattgtccttagttatttat 12231205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 46096581 - 46096646
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatt 231  Q
    |||||||||||||||   || | |||||||| |||||||||||||||| |||||||||| | |||||||    
T  46096581 atttaactgtcactt---aaattcaatgcaacattaaatgttgttttatcaatattatctttagttatt 46096646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 5597855 - 5597920
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagtt 228  Q
    |||||||||||||||  ||||| |||||||| |||||||  ||||||| |||||||| ||| ||||    
T  5597855 atttaactgtcacttccaaagttcaatgcaacattaaataatgttttatcaatattacccttagtt 5597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 48508113 - 48508222
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattt-tgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||||||||||||  |||| |||||  ||| |||||  |||||| |||||||||  | ||| |||||||| |||||| ||| ||||    
T  48508113 tactccctccgttcctttttaagtgtctattttgaagaatttttatgttcctatttaattgtcactttacacagttcaatgcaacattaaaagttatttt 48508212  T
Q  210 accaatatta 219  Q
    || |||||||    
T  48508213 actaatatta 48508222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 1677196 - 1677228
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt 144  Q
    ||||||||||||| |||||||||||||||||||    
T  1677196 tactccctccgttcctttttaagtgtcactttt 1677228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 48174924 - 48174848
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgca 192  Q
    |||||||| |||||||| ||| | ||||  ||||| |||| ||| | |||||||||||||||||||||| |||||||    
T  48174924 cctccgttcctttttaattgttatttttagagaaattttttgtttttatttaactgtcacttttaaagttcaatgca 48174848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 52825311 - 52825355
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| ||||| || |||||||||||||||    
T  52825311 ttaactgtcactttcaaagttcaatgtaacattaaatgttgtttt 52825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 138992 - 138868
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcactttt-aaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  138992 tactccctccgttcctttttaagtgtcacttttagagaaaattattgttcttatttaactgtcatttttcaaagttcaatgcaacattaaatgttgtttt 138893  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  138892 accaatattatccttagttatttat 138868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 148288 - 148406
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatt--ttgttctcatttaactgtcactttt-aaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||| ||||||||||||||||||| |||||||    |||||   |||||||||||| |||| ||||| |||||||| |||||||||||||||||||||    
T  148288 tccgttcctttttaagtgtcacttttgaagaaaaaaaattgtttctatttaactgtcatttttcaaagttcaatgcaacattaaatgttgttttaccaat 148387  T
Q  216 attatcctcagttatttat 234  Q
    || ||||| ||||||||||    
T  148388 ataatccttagttatttat 148406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 6072414 - 6072537
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| ||||| |||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  6072414 tactccctccgtttctttttaagcgtcacttttggagaaaatttttgttcttatttaactgttactttcaaagttcaatgcaacattaaatgttgtttta 6072513  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  6072514 ccaatattgtccttagttatttat 6072537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 4175739 - 4175614
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||    
T  4175739 agtactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttt 4175640  T
Q  209 taccaatattatcctcagttatttat 234  Q
    || ||||||| |||| ||||||||||    
T  4175639 tatcaatattgtccttagttatttat 4175614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 4689048 - 4688932
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||| |||||||||||||| |||| ||||||| ||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  4689048 ctccgttcctttttaagtgtca-ttttgaagaaaaattttgttcatatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaata 4688950  T
Q  217 ttatcctcagttatttat 234  Q
    ||||||| ||||||||||    
T  4688949 ttatccttagttatttat 4688932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 12664820 - 12664943
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  12664820 tactccctccgtttctttttaagtgttacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgtagtttta 12664919  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  12664920 ccaatattgtccttagttatttat 12664943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 42911512 - 42911635
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||||||||||||| |||||  |||||||||| |||   |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  42911512 tactccctccgtttctttttaagtgtctcttttggagaaaatttttgttactatttaactgtcactttcaaagttcaatgcaacattaaatattgtttta 42911611  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  42911612 ccaatattatccttagttatttat 42911635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 4017386 - 4017499
Alignment:
Q  122 gtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattat 220  Q
    ||||||||||||  ||| ||||| |||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  4017386 gtttctttttaaccgtctcttttgaagaaattttttgttcttatttaactgtcacttttaaagttcaatgcaatattaaatgttgatttaccaatattat 4017485  T
Q  221 cctcagttatttat 234  Q
    ||| ||||||||||    
T  4017486 ccttagttatttat 4017499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18465663 - 18465786
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||| ||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |||||| ||||| |||||||| ||||||| ||||||||    
T  18465663 tactcccaccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgccactttcaaagttcaatgcaacattaaatattgtttta 18465762  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  18465763 ccaatattatccttagttatttat 18465786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 26854351 - 26854228
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  26854351 tactccctctgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcacttccaaagttcaatgcaacattaaatgttgtttta 26854252  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  26854251 ccaatattatccttagttatttat 26854228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 31802758 - 31802873
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    |||||||||||||||||||| |||||  |||||||||||||   |||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||    
T  31802758 tccgtttctttttaagtgtctcttttggagaaaattttgtttcaatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatatt 31802857  T
Q  219 atcctcagttatttat 234  Q
    | ||| ||||||||||    
T  31802858 acccttagttatttat 31802873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 38910236 - 38910359
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||  ||||||||||||||||||  ||||| ||||  | || |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  38910236 tactctctccgttcttttttaagtgtcacttttggagaaattttttgtttctatttaactgtcacttttaaagttcaatgcaacattaaatgttgtttta 38910335  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  38910336 ccaatattatccttagttatttat 38910359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 39073006 - 39073129
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  || |||| |||||||  |||||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  39073006 tactccctccgttcctttttaagtgtcaattttggaaaaaaaatttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttta 39073105  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  39073106 ccaatattatccttagttatttat 39073129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 10889349 - 10889244
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  10889349 ctccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcatttttaaagttcaatgcaacattaaatgttgttttacc 10889250  T
Q  213 aatatt 218  Q
    ||||||    
T  10889249 aatatt 10889244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 7403816 - 7403937
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||| |||||||||||||   |||||  ||||||||  |||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  7403816 tactccctccgttcctttataagtgtcacttt--gagaaattttttgttcatatttaactctcactttcaaagttcaatgcaatattaaatgttgtttta 7403913  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  7403914 ccaatattatccttagttatttat 7403937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 7579925 - 7579802
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  | || ||||||||||||||||  |||| |||||||| ||||||||||||||||    
T  7579925 tactccctccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcgaagttcaatgcaacattaaatgttgtttta 7579826  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  7579825 ccaatattgtccttagttatttat 7579802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18794745 - 18794868
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||||||||||||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  18794745 tactccctccattcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 18794844  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  18794845 ccaatattgtccttagttatttat 18794868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 28024516 - 28024393
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||| ||| ||||||||||||| |||||  |||||| ||||||||  |||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  28024516 tactctctctgttcctttttaagtgtctcttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgtaacattaaatgttgtttta 28024417  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  28024416 ccaatattatccttagttatttat 28024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 28463642 - 28463519
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||| | |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  28463642 tactccctccgttcctttttaagtgtcacttttggagaaattttttgtttttatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 28463543  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  28463542 ccaacattacccttagttatttat 28463519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 37306955 - 37306833
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| |||||| |||||||| ||||||||||  |||||| |||||||  | |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  37306955 tactccatccgttcctttttaactgtcacttttagagaaaaatttgttcctaattaactgtcacttttaaagttcaatgcaacattaaatgatgttttac 37306856  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| || |||||||    
T  37306855 caatattacccttagatatttat 37306833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 38297874 - 38297750
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt--gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  ||||  |||||||||||||||| ||||| |||||||| | |||||||||||||    
T  38297874 tactccctccgttcctttttaagtgtcacttttggagaaatttttttgttcatatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttt 38297775  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||||| |||| ||| ||||||||||    
T  38297774 accaacattacccttagttatttat 38297750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 2134156 - 2134040
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||||||||||| ||||| |||||| |||| ||||| |||||| ||| ||||| ||||| |||||||| ||||||||||||||| |||||||    
T  2134156 tccgttcctttttaagtgtctcttttaaagaaattttttgttcttatttaattgttactttcaaagttcaatgcaacattaaatgttgttttgccaatat 2134057  T
Q  218 tatcctcagttatttat 234  Q
    |||||| ||||||||||    
T  2134056 tatccttagttatttat 2134040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 4098296 - 4098416
Alignment:
Q  115 tccctccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacca 213  Q
    ||||||||||||||||||||| ||||||||  ||||||||||  | ||| ||||||||||||||||||||| || | ||| ||||||||||||||| |||    
T  4098296 tccctccgtttctttttaagtatcacttttggagaaaatttttgtttcaatttaactgtcacttttaaagttcagtacaacattaaatgttgttttgcca 4098395  T
Q  214 atattatcctcagttatttat 234  Q
    ||||||||||  |||||||||    
T  4098396 atattatcctttgttatttat 4098416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 1297995 - 1297872
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||  ||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||| | |||||||| ||||||| ||||||||    
T  1297995 tactctctccgttcttttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaaattcaatgcaacattaaatattgtttta 1297896  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  1297895 ccaatattgtccttagttatttat 1297872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 1795374 - 1795251
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| |||||||||||||||||||||| ||||| |||||  | | ||||||||||||||    
T  1795374 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttctcatttaactgtcactttcaaagttcaatgttacaataaatgttgtttta 1795275  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| | ||||||||    
T  1795274 ccaacattacccttatttatttat 1795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 38363153 - 38363260
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||| ||||||  |||||||||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  38363153 tactccatccgttcctttttaagtgttacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 38363252  T
Q  211 ccaatatt 218  Q
    ||||||||    
T  38363253 ccaatatt 38363260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 32440172 - 32440046
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||| ||| ||||||||||||||||||   |||||||||| ||||  |||||||||||||||| ||||| |||||||| | |||||||||||    
T  32440172 aagtactccctctgttcctttttaagtgtcactttaggagaaaatttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtt 32440073  T
Q  208 ttaccaatattatcctcagttatttat 234  Q
    ||||||| |||| | | ||||||||||    
T  32440072 ttaccaacattacctttagttatttat 32440046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 9127609 - 9127485
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||||||||  |||| | |||| |||| ||||  |||||| ||||||||||||||| |||||||| |||||||||| ||||    
T  9127609 gtactccctccgttcctttttaagtgtctattttgatgaaattttttgttcgtatttaattgtcacttttaaagttcaatgcaacattaaatgttatttt 9127510  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||| | | ||||||||    
T  9127509 accaatattatctttaattatttat 9127485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 10359493 - 10359369
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||| |||||||||||| ||| ||| ||||||  ||||||||||  | || |||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  10359493 gtactctctccgtttctttataactgtaacttttggagaaaatttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 10359394  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||||||||| |||| ||||||||||    
T  10359393 accaatattgtccttagttatttat 10359369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 12784699 - 12784591
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||| ||||| ||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| | ||| ||||||||||    
T  12784699 tactccctccgtttctttttaactgtcatttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacactaattgttgtttta 12784600  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  12784599 ccaatatta 12784591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 34261289 - 34261397
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||| ||||  ||||||||||  | || |||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||| |    
T  34261289 tttttaagtgtcaattttgcagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacgttaaatgttgttttaccaatattatcctta 34261388  T
Q  226 gttatttat 234  Q
    |||||||||    
T  34261389 gttatttat 34261397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 38503057 - 38502945
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||| | |||||||| ||||||| || |||||    
T  38503057 tactccctccgttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactgtcactttcaaaattcaatgcaacattaaatattatttta 38502958  T
Q  211 ccaatattatcct 223  Q
    |||||||||||||    
T  38502957 ccaatattatcct 38502945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 1088146 - 1088067
Alignment:
Q  155 ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  1088146 ttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 1088067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 4427663 - 4427540
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||  |||||  ||||| |||| ||||  ||| |||||||||||| ||||| ||||| || ||||||||||||||||    
T  4427663 tactctctccgttcctttttaagtgtttcttttggagaaattttttgttcatattcaactgtcactttcaaagttcaatgaaacattaaatgttgtttta 4427564  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  4427563 ccaatattatccttagttatttat 4427540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 8825019 - 8825142
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||| ||||  ||||| |||| ||||  |||||||||||| |||  |||| |||||||| ||||||||||||||||    
T  8825019 tactccttccgttcctttttaagtgtcattttttgagaaattttttgttcatatttaactgtcattttcgaagttcaatgcaacattaaatgttgtttta 8825118  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  8825119 ccaatattgtccttagttatttat 8825142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 18437580 - 18437457
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||||||||||||||||| ||||| |||||| ||||  | ||| ||||| ||||||||| ||| | ||||| || ||||||||||||||||    
T  18437580 tactccctctgtttctttttaagtgtctcttttgaagaaattttttgtttcaatttaagtgtcactttcaaaatccaatgtaacattaaatgttgtttta 18437481  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| ||||||||||    
T  18437480 ccaatattacccttagttatttat 18437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 38702103 - 38702226
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  ||||| |||| ||||  ||||||||||||||||  |||| |||||||| | ||||||||||||||    
T  38702103 tactccctccgttcctttttaagtgtcaattttggagaaattttttgttcctatttaactgtcactttcgaagttcaatgcaacaataaatgttgtttta 38702202  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| | ||||||||    
T  38702203 ccaatattgtccttaattatttat 38702226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 42394385 - 42394286
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  42394385 tactccctccgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 42394286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 25027976 - 25027858
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||| ||| ||||| ||||||||  ||||||||||||||| ||||    
T  25027976 cctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcattttcaaagttcaatgcaactttaaatgttgttttatcaat 25027877  T
Q  216 attatcctcagttatttat 234  Q
    |||| ||| ||||||||||    
T  25027876 attacccttagttatttat 25027858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 9076071 - 9076156
Alignment:
Q  149 aaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||  |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  9076071 aaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattgtccttagttatttat 9076156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 18020999 - 18020902
Alignment:
Q  138 cacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| |||||||||||  | || |||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  18020999 cacttttgaagaaaatttttgtttctatttaactgtcactttcaaaattcaatgcaacattaaatgttgttttaccaatattatccttagttatttat 18020902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 38017492 - 38017411
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  38017492 ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatctttagttatttat 38017411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 9959134 - 9959022
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||| ||||||| |||  ||||||||||  | || ||||||| ||| |||| ||||| ||||||||||| |||||||||||||    
T  9959134 tactccctccgttcctttttacgtgtcacatttagagaaaatttttgtttctatttaaccgtcgctttcaaagttcaatgcaatatcaaatgttgtttta 9959035  T
Q  211 ccaatattatcct 223  Q
    |||||||||||||    
T  9959034 ccaatattatcct 9959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 12870141 - 12870033
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    ||||||||||||||||||  ||||||  |||||||  |||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||| | || |    
T  12870141 tttttaagtgtcacttttagagaaaaaatttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttaccaatattgttctta 12870042  T
Q  226 gttatttat 234  Q
    |||||||||    
T  12870041 gttatttat 12870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 2674180 - 2674113
Alignment:
Q  166 taactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttattta 233  Q
    |||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2674180 taactgccactttcaaagttcaatgcaacattaaatgttgttttaccaatattatcctcagttattta 2674113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 8230060 - 8229937
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| | |||| |||||||||||||  |||| |||||| ||||  |||  |||||||||||| |||  |||| |||||||| ||||||||||||||||    
T  8230060 tactcctttcgttcctttttaagtgtctattttgaagaaattttttattcctatttaactgtcattttccaagttcaatgcaacattaaatgttgtttta 8229961  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  8229960 ccaatattatccttagttatttat 8229937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 21606515 - 21606392
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| |||| |||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  21606515 tactccctccgttcctttttaaatgtctcttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 21606416  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| | ||||||||    
T  21606415 ccaacattacccttaattatttat 21606392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 25343922 - 25344045
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||| ||||||||||||||  ||||||||||  | || ||||||| || ||||| ||| | |||||||| ||||||||||||||||    
T  25343922 tactccttccgttcctttgtaagtgtcacttttggagaaaatttttgtttctatttaaccgttactttcaaatttcaatgcaacattaaatgttgtttta 25344021  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  25344022 ccaatattgtccttagttatttat 25344045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 38298056 - 38297936
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||||||||||||||| | ||||| || ||  |||| |||  |||||||||||||||| |||||   |||||  |||||||||||||||||    
T  38298056 tactccctccgtttctttttaagtgcctcttttgaataatttttttttcctatttaactgtcactttcaaagt--tatgcatcattaaatgttgttttac 38297959  T
Q  212 caatattatcctcagttatttat 234  Q
    ||||||||||||  |||||||||    
T  38297958 caatattatcctttgttatttat 38297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 40198750 - 40198873
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| ||||||||||||| |||||  ||||| |||| |||   |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  40198750 tacttcctctgttcctttttaagtgtctcttttggagaaattttttgttactatttaactgtcactttcaaagttcaatacaacattaaatgttgtttta 40198849  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||  ||||||||||    
T  40198850 ccaatattatccgtagttatttat 40198873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 40209225 - 40209102
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||| || ||||||||||||| |  ||||| |||| ||||  |||||||||||||||| ||| | |||||||| | ||||||||||||||    
T  40209225 tactccctccgttttttattaagtgtcacttctggagaaattttttgttcctatttaactgtcactttcaaaattcaatgcaacaataaatgttgtttta 40209126  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  40209125 ccaacattacccttagttatttat 40209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 12723216 - 12723108
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| |||||||| ||||| ||||  |||||| ||||||||  |||||| ||||||||||||||| |||||||| | ||| ||||||||||    
T  12723216 tactccctctgttcctttttaactgtcatttttggagaaaaattttgttcctatttaattgtcacttttaaagttcaatgcaacactaattgttgtttta 12723117  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  12723116 ccaatatta 12723108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 28447241 - 28447129
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||| ||||  |||||||| ||||||| |||||  ||||||| |||||||||| |||||    
T  28447241 tactccctccgttcctttttaagtgtctcttttggagaaaatttttgttcctatttaactctcactttcaaagttaaatgcaacattaaatgttatttta 28447142  T
Q  211 ccaatattatcct 223  Q
      |||||||||||    
T  28447141 taaatattatcct 28447129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 32388995 - 32389071
Alignment:
Q  158 ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||| || |||||||    
T  32388995 ttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagatatttat 32389071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 4694726 - 4694849
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||||| || |||||  ||||  |||| ||||  |||||||||||||||| ||||| |||||||| |||| ||||| |||||    
T  4694726 tactccctccgttcatttttaagtatctcttttggagaatttttttgttcatatttaactgtcactttcaaagttcaatgcaacattagatgttatttta 4694825  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| ||||||||||    
T  4694826 ctaatattatccttagttatttat 4694849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 6007845 - 6007952
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||||||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  6007845 tactccatccgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttta 6007944  T
Q  211 ccaatatt 218  Q
     |||||||    
T  6007945 tcaatatt 6007952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 19831800 - 19831689
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||| ||| |||||||||||||  ||||  ||||| ||||  | || |||||||| ||||||| ||||| |||||||| |||||||||||||    
T  19831800 aagtactccctctgttcctttttaagtgtcttttttagagaaattttttgtttctatttaactctcactttcaaagttcaatgcaacattaaatgttgtt 19831701  T
Q  208 ttaccaatatta 219  Q
    ||||||||||||    
T  19831700 ttaccaatatta 19831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 24469893 - 24469771
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaa-gtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||| |||||||  |||||| ||||||||  |||||||||||||||| ||| || ||||| || | ||||||||||||||    
T  24469893 tactccttccgttcctttttaagtatcactttg-aagaaatttttgttcatatttaactgtcactttaaaaagttcaatgtaacaataaatgttgtttta 24469795  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||||||| | ||||||||    
T  24469794 ccaacattatccttaattatttat 24469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 31803286 - 31803409
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||| ||||| ||||  ||||||  |||||||| |||||||| ||||||| ||||| |||||||| |||||| | |||||||    
T  31803286 tactccatccgttcctttttaactgtcatttttagagaaaaaatttgttcttatttaactatcactttcaaagttcaatgcaacattaaacgatgtttta 31803385  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| || |||||||    
T  31803386 ctaatattatccttagatatttat 31803409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 4985431 - 4985309
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||||| ||||||||||||| |||||  |||   |||||||   |||||||||||||||| ||||| |||||||| |||||||  |||||||     
T  4985431 tactccctccgttcctttttaagtgtctcttttggagatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaataatgttttat 4985332  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||| ||| | ||||||||    
T  4985331 caatattacccttaattatttat 4985309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 39894023 - 39893958
Alignment:
Q  154 tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||  |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  39894023 tttgttcctatttaactgtcacttttaaagttcaatgcaacattaaatattgttttaccaatatta 39893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 4962391 - 4962320
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||| | ||||||||||    
T  4962391 atttaactgtcactttcaaagttcaatggaacattaaatgttgttttacaaatattatctttagttatttat 4962320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 5144255 - 5144132
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||| ||||  ||||| |||| ||||  |||||| ||||||||| ||||| |||||||| | ||||| ||||||||    
T  5144255 tactccctccgttcctttttaattgtcatttttggagaaattttttgttcctatttaagtgtcactttcaaagttcaatgcaacaataaatcttgtttta 5144156  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| | ||||||||    
T  5144155 ccaacattacccttaattatttat 5144132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 14793995 - 14793924
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||| ||||| ||||| |||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  14793995 atttaaatgttactttcaaagttcaatgcaacattaaatgttgttttatcaatattatccttagttatttat 14793924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 16124465 - 16124394
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||| || || |||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  16124465 atttaactgttaccttcaaagtttaatgcaacattaaatgttgttttaccaatattatccttagttatttat 16124394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 26906470 - 26906577
Alignment:
Q  128 ttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaatattatcctcag 226  Q
    |||||||| ||||||||  ||||| |||||||   |||||||||||||||| ||||| |||||||  ||||||||||| |||||||||||| | ||| ||    
T  26906470 ttttaagtatcacttttgtagaaatttttgtttctatttaactgtcactttcaaagttcaatgcagcattaaatgttgtttttaccaatatcacccttag 26906569  T
Q  227 ttatttat 234  Q
    ||||||||    
T  26906570 ttatttat 26906577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 37303312 - 37303241
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||| | |||| ||| |||||||||||||| |||||||||||||| ||||||||||    
T  37303312 atttaactgtcactttcaaaattcaatacaacattaaatgttgtttcaccaatattatccttagttatttat 37303241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 425088 - 425194
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctca-tttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| ||||  | ||  ||||||||||| ||| ||||| |||||||| | |||||||||||    
T  425088 aagtactccctccgttcatttttaagtgtcacttttggagaaattttttgtttctgtttaactgtcattttcaaagttcaatgcaacaataaatgttgtt 425187  T
Q  208 ttaccaa 214  Q
    |||||||    
T  425188 ttaccaa 425194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 6689614 - 6689684
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||| || | ||||||||    
T  6689614 tttatctgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattattcttaattatttat 6689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 7735341 - 7735228
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat--tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||| || |||||||||||||  ||||||||| |||||||   |||||| | |||||||||||||| | ||| | |||||||| ||| |||||||||||    
T  7735341 tactcacttcgtttctttttaaccgtcacttttaaagaaaaaaatttgtttttatttaactgtcactgtcaaaattcaatgcaaaattcaatgttgtttt 7735242  T
Q  210 accaatattatcct 223  Q
    ||||| ||||||||    
T  7735241 accaacattatcct 7735228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 38160296 - 38160366
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    ||||||||  ||||||||||| |||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  38160296 ttttgttcctatttaactgtcgctttcaaagttcaatgcaacattaaatgtagttttaccaatattatcct 38160366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 3686356 - 3686464
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||   ||||||||  |||||| |||||||||  | ||| |||||||| |||||||||| |||||    
T  3686356 tactccctccgttcctttttaagtgtcacttttggagatttttttgttcctatttaagtgtcactttacatagttcaatgcaacattaaatgttatttta 3686455  T
Q  211 ccaatatta 219  Q
    | |||||||    
T  3686456 ctaatatta 3686464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 21157600 - 21157696
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||| |||||||| ||||||||||  | ||||||||  | || | |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  21157600 cctccgttcctttttaattgtcacttttgcataaaatttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 21157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 24075095 - 24074987
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || ||||||||||||| ||||| |||||  |||| |||   |||||||||||||||| ||||| |||||||| |||||||| | |||||    
T  24075095 tactccctccattcctttttaagtgtctcttttaaagaatttttttgtttatatttaactgtcactttcaaagttcaatgcaacattaaatgatatttta 24074996  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  24074995 tcaatatta 24074987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 37809721 - 37809829
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| |||||||| ||||||||||  ||||||  |||||||  | |||||||||||||| ||||| || ||||| |||||||| |||||||    
T  37809721 tacttcctctgttcctttttaactgtcacttttagagaaaaaatttgttcctaattaactgtcactttcaaagttcattgcaacattaaatgatgtttta 37809820  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  37809821 ccaatatta 37809829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 5119192 - 5119263
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| |||||| ||||| |||||||  ||||||| |||||||||||||||||||||  |||||||||    
T  5119192 atttaactgccactttcaaagttcaatgcatcattaaatattgttttaccaatattatcctttgttatttat 5119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 6754427 - 6754313
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||||| ||||||||||||||||     |||||| ||||||||  |||||||||||||||| ||||| |||| ||| |||||||||||||||| |||||    
T  6754427 ctccgttcctttttaagtgtcactag---agaaaagttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgttttatcaata 6754331  T
Q  217 ttatcctcagttatttat 234  Q
    | ||  | ||||||||||    
T  6754330 tcatttttagttatttat 6754313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 36239472 - 36239543
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||| |||||||| ||| | ||||||||    
T  36239472 atttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttaattatttat 36239543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 30368372 - 30368263
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| ||||||||||||| ||||| |||||   ||||||||| |||||| |||||||||  | ||  |||||||| |||||||||| ||||    
T  30368372 tactccctccgttcctttttaagtgtctcttttaaagaatttttttgttcttatttaagtgtcactttacatagatcaatgcaacattaaatgttatttt 30368273  T
Q  210 accaatatta 219  Q
    || |||||||    
T  30368272 actaatatta 30368263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 7408345 - 7408401
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||| ||||||||| ||||| ||| |||||||||||| |||||||||||||||||    
T  7408345 atttaattgtcactttcaaagttcaaagcaatattaaatattgttttaccaatatta 7408401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 12638189 - 12638089
Alignment:
Q  120 ccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatt 218  Q
    ||||| |||||||| ||| ||||||  ||||||  |||||||  |||||| ||| ||||||||||| |||||||| |||||||||||||||| ||| |||    
T  12638189 ccgttcctttttaattgttacttttagagaaaaaatttgttcgtatttaattgttacttttaaagttcaatgcaacattaaatgttgttttatcaaaatt 12638090  T
Q  219 a 219  Q
    |    
T  12638089 a 12638089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 21150459 - 21150555
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||| |||||||| ||||||||||  | ||| ||||  | || | |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  21150459 cctccgttcctttttaattgtcacttttgcataaattttttgtttctaattaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 21150555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31985307 - 31985184
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||    ||||| |||| |||   ||| |||||||||||| ||||| |||||||| |||||| ||| |||||    
T  31985307 tactccctccgttcctttttaagtgtctcttgcggagaaattttttgtttatattcaactgtcactttcaaagttcaatgcaacattaaaagttatttta 31985208  T
Q  211 ccaatattatcctcagttatttat 234  Q
    || |||||| ||| | ||||||||    
T  31985207 ccgatattacccttaattatttat 31985184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 5843250 - 5843144
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||||||||  || ||||||  ||||| |||| ||||  |||||||||||  ||| ||||| |||||||||||||||||| ||||||    
T  5843250 tactccctctgttcctttttaatcgttacttttagagaaattttttgttcctatttaactgtcgttttcaaagttcaatgcaatattaaatgtagtttta 5843151  T
Q  211 ccaatat 217  Q
     ||||||    
T  5843150 tcaatat 5843144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 18676671 - 18676560
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||| |||||||| |||||||| ||||||||||  | ||| |||| ||| | | |||  ||||||||| ||||| |||||||| |||||||||||||||    
T  18676671 gtacttcctccgttcctttttaattgtcacttttgcataaattttttgtttttaatta--tgtcactttcaaagttcaatgcaacattaaatgttgtttt 18676574  T
Q  210 accaatattatcct 223  Q
    |||  |||||||||    
T  18676573 acctttattatcct 18676560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 37633692 - 37633746
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||| ||||| || ||||| |||||||| ||||||||||||||||    
T  37633692 ttaactgtcactttcaaagttcattgcaacattaaatgatgttttaccaatatta 37633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 13461024 - 13461080
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    ||||||||||||||||||| ||  ||||||| | |||||||||||||||||| ||||    
T  13461024 atttaactgtcacttttaatgttgaatgcaacaataaatgttgttttaccaacatta 13461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 24228962 - 24229033
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||| ||| |||||  |||| |||||||| |||||||||||||||| |||||||||| | | ||||||||    
T  24228962 atttaattgttactttcgaagttcaatgcaacattaaatgttgttttatcaatattatctttacttatttat 24229033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 11413733 - 11413687
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||    
T  11413733 ttaactatcactttcaaagttcaatgcaacattaaatgttgttttac 11413687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 13957417 - 13957319
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| |||| ||| ||||||||||  ||||  |||| |||  || |||||||||||| | ||||| ||||| || |||||||||||||||    
T  13957417 tactccctccgttcctttataactgtcacttttacagaatttttttgtttccaattaactgtcactctcaaagttcaatgtaacattaaatgttgtttt 13957319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 25785869 - 25785967
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||| |||||||| |||||||| |||||||| |  ||||| ||||  | || | |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  25785869 tactacctccgttcctttttaattgtcacttctgcagaaatttttagtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 25785967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 13703123 - 13703167
Alignment:
Q  175 cttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||| ||||| |||||||| ||||||||| |||||||||||||||    
T  13703123 ctttcaaagttcaatgcaacattaaatgtagttttaccaatatta 13703167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 18393174 - 18393130
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  18393174 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 18393130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 9706783 - 9706890
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcag 226  Q
    ||||||||||||| |||| ||||||| |||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||    
T  9706783 tttttaagtgtcatttttgaagaaaaatttgttttaatttaactgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatattatccttag 9706882  T
Q  227 ttatttat 234  Q
    ||||||||    
T  9706883 ttatttat 9706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 10812179 - 10812302
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  10812179 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 10812278  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  10812279 ccaatattatccttaattatttat 10812302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 11222580 - 11222456
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||||||||||| ||||| |||||| ||||  | || |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  11222580 gtactccctccgttcctttttaagtgtctcttttgaagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttt 11222481  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  11222480 accaatattatccttagttatttat 11222456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 14296020 - 14295897
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  14296020 tactccctccgttcctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcactttcaaagttcaatacaacattaaatgttgtttta 14295921  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  14295920 ccaatattgtccttagttatttat 14295897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 26342560 - 26342683
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| |||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  26342560 tactccctccgttcctttttaagtgtcacttttggagaaatttttggttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 26342659  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  26342660 ccaatattgtccttagttatttat 26342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 34357158 - 34357280
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||||  |||||||  |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  34357158 tactccctccgttcctttttaagtgtcacttttggagaaaaaatttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttta 34357257  T
Q  211 ccaatattatcctcagttattta 233  Q
    ||||||||||||| |||||||||    
T  34357258 ccaatattatccttagttattta 34357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 3363584 - 3363687
Alignment:
Q  132 aagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttat 230  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  3363584 aagtgtcacttttggagaaaagttttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttat 3363683  T
Q  231 ttat 234  Q
    ||||    
T  3363684 ttat 3363687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 11560310 - 11560187
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||||||| |||||||||| ||||  ||||||||||  | || |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  11560310 tactccctccgtttcttcttaagtgtcagttttggagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 11560211  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  11560210 ccaatattgtccttagttatttat 11560187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 28145835 - 28145712
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||||||| |||||||||||||||||||  ||||||||||  |||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  28145835 tacttcctccgttcctttttaagtgtcacttttggagaaaatttttcttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 28145736  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  28145735 ccaatattgtccttagttatttat 28145712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 36405105 - 36404982
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||||||  |||||||||||| ||||| |||||||||||  | || |||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  36405105 tactccttccgttcatttttaagtgtctcttttgaagaaaatttttgtttctatttaactgtcactttcaaagttcaatgcaatattaaatgttatttta 36405006  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  36405005 ccaatattatccttagttatttat 36404982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 479235 - 479113
Alignment:
Q  114 ctccctccgtttcttttt-aagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||||||||| |||||| |||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||     
T  479235 ctccctccgttccttttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttat 479136  T
Q  212 caatattatcctcagttatttat 234  Q
    |||||||||||| ||||||||||    
T  479135 caatattatccttagttatttat 479113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 25558444 - 25558324
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||||||||||||||||||||  ||||||||||  | || |||||||||||||||| |||||  ||||||| |||||||||||||||| |    
T  25558444 ctccctccgtttctttttaagtgtcacttttggagaaaatttttgtttctatttaactgtcactttcaaagtt-aatgcaacattaaatgttgttttatc 25558346  T
Q  213 aatattatcctcagttatttat 234  Q
    ||||||||||| ||||||||||    
T  25558345 aatattatccttagttatttat 25558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 13849978 - 13849870
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  13849978 tactccctccgtttctttttaattgtcacttttaaagaaattttttgttcttatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttta 13849879  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  13849878 tcaatatta 13849870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 15893844 - 15893720
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaa-aattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||||||||| ||||  | || || |||||||  |||||||||||| ||| ||||| |||||||| |||||||||||||||    
T  15893844 gtactccctccgttcctttttaagtgtcaattttggaaaataaatttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgtttt 15893745  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  15893744 accaatattatccttagttatttat 15893720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 35158614 - 35158502
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||||||||||||||||||| |||||| |||| ||||  ||||||||||||||||  || | |||||||||||||||||||||||||    
T  35158614 tactccctctgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactgtcactttcgaaattcaatgcaatattaaatgttgtttta 35158515  T
Q  211 ccaatattatcct 223  Q
    |||||||||||||    
T  35158514 ccaatattatcct 35158502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 14541311 - 14541434
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  |||||| | |||||   |||||||||||||||| ||||| |||||||| |||||| |||||||||    
T  14541311 tactccctccgttcctttttaaatgtcacttttggagaaaaatattgtttcaatttaactgtcactttcaaagttcaatgcaacattaaacgttgtttta 14541410  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  14541411 ccaatattatccttagttatttat 14541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 41885605 - 41885728
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||| |||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  41885605 tactccctccgttcctttttaggtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttatttta 41885704  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  41885705 ccaatattgtccttagttatttat 41885728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 30264856 - 30264742
Alignment:
Q  121 cgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||| |||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||| |||| ||| ||||||||||||||||||||||||     
T  30264856 cgttcctttttaagtgtcacttttggagaaaaattttgttcttatttaactgtcattttcaaagttcaatacaacattaaatgttgttttaccaatattg 30264757  T
Q  220 tcctcagttatttat 234  Q
    |||| ||||||||||    
T  30264756 tccttagttatttat 30264742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 37093435 - 37093553
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||| |||||||||||||||||||| ||||    
T  37093435 cctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatacaatattaaatgttgttttatcaat 37093534  T
Q  216 attatcctcagttatttat 234  Q
    ||| |||| ||||||||||    
T  37093535 attgtccttagttatttat 37093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 14288411 - 14288534
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||  |||||||||||| ||| ||||| ||||  || ||||||||||||||||    
T  14288411 tactccctccgtttctttttaagtgtcacttttggagaaaatttttgttcctatttaactgtcattttcaaagttcaatataacattaaatgttgtttta 14288510  T
Q  211 ccaatattatcctcagttatttat 234  Q
     ||||||| |||| | ||||||||    
T  14288511 tcaatattgtccttaattatttat 14288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 15677554 - 15677431
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||||||||| ||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||| || |||||    
T  15677554 tactccctccgttattttttaagtgtcatttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattatttta 15677455  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  15677454 tcaatattatccttagttatttat 15677431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34399182 - 34399305
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  |||  |||||||  ||||||| ||||| |||||||| ||||||| ||||||||    
T  34399182 tactccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaaccatcactttcaaagttcaatgcaacattaaatattgtttta 34399281  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  34399282 ccaatattatccttagttatttat 34399305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 19594330 - 19594453
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||| | |||||||| |||||||||||||||    
T  19594330 gtactccctccgttcctttttaattgtcactttttgagaaattttttgttcctatttaactgtcactttcaaatt-caatgcaacattaaatgttgtttt 19594428  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||||||||| |||  ||||||||||    
T  19594429 accaatattgtccatagttatttat 19594453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13753935 - 13754058
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||| |||| ||||||||||||| |||||  |||| ||||| ||||  |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  13753935 tactcccttcgttcctttttaagtgtctcttttggagaacatttttgttccaatttaactgtcactttcaaagttcaatacaacattaaatgttgtttta 13754034  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| ||||||||||    
T  13754035 tcaatattacccttagttatttat 13754058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13965587 - 13965710
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||| || |||||||| |||| |||||  ||||| |||| ||||  |||||||||| ||||||||||| |||||||| ||||||||||| | ||    
T  13965587 tactccctccattactttttaaatgtctcttttggagaaattttttgttcatatttaactgttacttttaaagttcaatgcaacattaaatgttgatata 13965686  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  13965687 ccaatattatccttagttatttat 13965710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 15183264 - 15183141
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||| |||| |||||||||||||||||||  ||||| ||||  | || |||||| |||||||||  |||| |||||||| ||||||||||||||||    
T  15183264 tactcccttcgttcctttttaagtgtcactttttgagaaattttttgtttctatttaattgtcactttcgaagttcaatgcaacattaaatgttgtttta 15183165  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  15183164 ccaatattgtccttagttatttat 15183141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 43077272 - 43077395
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||  || |||||||| |||||||||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  43077272 tactccctctattcctttttaattgtcacttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatattgtttta 43077371  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| || |||||||    
T  43077372 ccaatattacccttagatatttat 43077395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 4883601 - 4883706
Alignment:
Q  130 ttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagtt 228  Q
    ||||||||| ||||| |||||| |||| ||||  |||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||| | ||||    
T  4883601 ttaagtgtctcttttgaagaaattttttgttcctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattatctttagtt 4883700  T
Q  229 atttat 234  Q
    ||||||    
T  4883701 atttat 4883706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 32674189 - 32674314
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    ||||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||  ||||||| ||||| ||||||||  |||||||||||||    
T  32674189 agtactccctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaacaatcactttcaaagttcaatgcaactttaaatgttgttt 32674288  T
Q  209 taccaatattatcctcagttatttat 234  Q
    || |||||||| ||  ||||||||||    
T  32674289 tatcaatattacccgtagttatttat 32674314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 34309312 - 34309203
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||| ||| || ||||||||||||||||||| |||||  |||| |||  ||||||||||||||||  |||| |||||||| |||||||||||||||||    
T  34309312 tactccttccattcctttttaagtgtcacttttgaagaatttttttttcctatttaactgtcactttcgaagttcaatgcaacattaaatgttgttttac 34309213  T
Q  212 caatattatc 221  Q
    |||| |||||    
T  34309212 caatgttatc 34309203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 2012848 - 2012964
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||||||||| ||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| | |||||||||||||||||| ||    
T  2012848 tccgttcctttttaagtgtcatttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacat 2012947  T
Q  218 tatcctcagttatttat 234  Q
    || ||| ||||||||||    
T  2012948 tacccttagttatttat 2012964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 32855043 - 32854935
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||| ||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  32855043 tactccctccgttcatttataattgtcacttttagagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 32854944  T
Q  211 ccaatatta 219  Q
    |||||||||    
T  32854943 ccaatatta 32854935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 13215373 - 13215496
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||  ||||||||||||| |||||  ||||  |||||||||  ||||||||||||||||  |||| ||||| || ||||||||||||||||    
T  13215373 tactccctctgtacctttttaagtgtctcttttagagaattattttgttcctatttaactgtcactttcgaagttcaatgtaacattaaatgttgtttta 13215472  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  13215473 ccaatattatccttacttatttat 13215496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 14284108 - 14284231
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||  |||   ||||  ||||||||| ||||| |||||||| |||||||||| |||||    
T  14284108 tactccatccgtttctttttaagtgtcacttttgaagaaattttttattcctgtttagttgtcactttcaaagttcaatgcaacattaaatgttatttta 14284207  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| | ||||||||    
T  14284208 ccaatattgtccttaattatttat 14284231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 38186271 - 38186192
Alignment:
Q  155 ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||| |||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  38186271 ttgttcttatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattgtccttagttatttat 38186192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 10263788 - 10263853
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagtt 228  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  10263788 atttaactgtcactttcaaatttcaatgcaatattaaatgttgttttaccaatattatccttagtt 10263853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 4654698 - 4654822
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||| ||| |||||  |||| |||||| ||||  | || |||||||||||||||  ||||| |||||||| ||||||| || ||||    
T  4654698 gtactccctccgttccttcttacgtgtcttttttgaagaaatttttcgtttctatttaactgtcacttgcaaagttcaatgcaacattaaatattatttt 4654797  T
Q  210 accaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||||||||    
T  4654798 accaatattatccttagttatttat 4654822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 9369954 - 9370062
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| |||||||||||| ||||| ||||  ||||| ||||  | || |||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  9369954 tactccctcagtttctttttaattgtcatttttggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaatattaagtgttgtttta 9370053  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  9370054 tcaatatta 9370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 38072482 - 38072366
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| ||||| |||||||||||||  ||||| ||||  | || |||||||||||| |||| |||| |||||||| |||||||||||||||||||||||    
T  38072482 tccgttccttttcaagtgtcacttttggagaaattttttgtttctatttaactgtcatttttgaagttcaatgcaacattaaatgttgttttaccaatat 38072383  T
Q  218 tatcctcagttatttat 234  Q
    | || | ||||||||||    
T  38072382 tgtctttagttatttat 38072366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 29041932 - 29042038
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    ||||| ||||||| |||||||| ||||||||||  | ||| |||| |||| |||||||||||||||| ||||| |||||||| |||| || |||||||||    
T  29041932 tactcgctccgttcctttttaattgtcacttttagataaattttttttct-atttaactgtcactttcaaagtccaatgcaacattagatattgttttac 29042030  T
Q  212 caatatta 219  Q
    ||||||||    
T  29042031 caatatta 29042038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31025203 - 31025080
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| |||   ||||| ||||  | || |||||||||||||||| ||||| |||||||| | ||||| ||||||||    
T  31025203 tactccctccgttcctttttaagtgtcattttgggagaaattttttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatcttgtttta 31025104  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  31025103 ccaacattacccttagttatttat 31025080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 25187348 - 25187282
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    ||||||||  |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  25187348 ttttgttcctatttaactgtcactttcaaagttcaatgcaatattaaatgttattttaccaatatta 25187282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 1395544 - 1395667
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt--gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||||||| ||||||||||||||| |||  ||||| ||||  ||||  |||||||||||||||| ||||| |||||||| | |||||||| ||||    
T  1395544 tactccctccgttcctttttaagtgtcacatttgtagaaattttttcgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgtt-tttt 1395642  T
Q  210 accaatattatcctcagttatttat 234  Q
    ||||| |||| ||| ||||| ||||    
T  1395643 accaacattacccttagttaattat 1395667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 6013497 - 6013578
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||||||||| ||||| |||||||| | |||||||||||||||||| |||| ||| ||||||||||    
T  6013497 ttttgttcctatttaactgtcactttcaaagttcaatgcaacaataaatgttgttttaccaacattacccttagttatttat 6013578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 32544008 - 32543927
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| |||||||||||||||| ||||| ||||||||  ||||||||||||||| |||||||| | | ||||||||||    
T  32544008 ttttgttctaatttaactgtcactttcaaagttcaatgcaactttaaatgttgttttatcaatattacctttagttatttat 32543927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 36375559 - 36375656
Alignment:
Q  120 ccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaata 216  Q
    ||||| |||||||||||||| ||||  |||||| ||||||||  |||| ||||||||||| ||||| |||||||| |||||||||||||||| |||||    
T  36375559 ccgttcctttttaagtgtcatttttggagaaaaattttgttcctatttgactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaata 36375656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 34884801 - 34884693
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| |||||||| ||||||||||  ||||| |||| ||||  |||||||| ||||||||||||| || ||||| ||||||||||||||||    
T  34884801 tactacctctgttcctttttaactgtcacttttagagaaattttttgttcctatttaactttcacttttaaagttcattgcaacattaaatgttgtttta 34884702  T
Q  211 ccaatatta 219  Q
     ||||||||    
T  34884701 tcaatatta 34884693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 13001178 - 13001051
Alignment:
Q  108 taagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgt 206  Q
    |||||||| ||||||||  || |||||||| ||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||||||  |||||| ||||    
T  13001178 taagtacttcctccgttcgttcttaagtgttacttttggagaaattttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatcttgt 13001079  T
Q  207 tttaccaatattatcctcagttatttat 234  Q
    |||| || ||||| ||| ||||||||||    
T  13001078 tttatcagtattacccttagttatttat 13001051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 8443686 - 8443794
Alignment:
Q  127 tttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaatattatcctc 224  Q
    ||||||| ||||| |||| |||||| ||||  || | |||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |||     
T  8443686 tttttaattgtcatttttgaagaaattttttgtccctatttaactgtcactttcaaagttcaatgcaa-attaaatgttgtttttaccaatattaccctt 8443784  T
Q  225 agttatttat 234  Q
    || |||||||    
T  8443785 agatatttat 8443794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 37116804 - 37116752
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  37116804 atttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatcaat 37116752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 4952950 - 4952860
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatg 202  Q
    |||||||||| ||||||||||| ||||| ||||  ||||| |||| ||||| |||||||||||| ||| ||||| |||||||| ||||||||    
T  4952950 tactccctcc-tttctttttaattgtcatttttagagaaattttttgttcttatttaactgtcattttcaaagttcaatgcaacattaaatg 4952860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 30544554 - 30544601
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  30544554 ttaactgtcactttcaaagttcaatgcaacattaaatgttgttttacc 30544601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 44360466 - 44360520
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||| ||||||    
T  44360466 atttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatat 44360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 37660129 - 37660222
Alignment:
Q  117 cctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    ||||||||  ||||||| ||||||||||  ||||| ||||  | || | |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  37660129 cctccgttcatttttaattgtcacttttgcagaaattttttgtttctaattaactgtcactttcaaagttcaatacaacattaaatgttgtttt 37660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 195999 - 195882
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  195999 tactccctccgttcctttttaagtgtcatttttggagaaaatttttgttcttatttaactgtcacttttaaagttcaatgcaacattaaatgttgtttta 195900  T
Q  211 ccaatattatcctcagtt 228  Q
     |||||||||||| ||||    
T  195899 tcaatattatccttagtt 195882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 30388701 - 30388824
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||  | |||||||||||||| ||||| ||||| || ||||||||||||||||    
T  30388701 tactccctccgttcctttttaagtgtcacttttgaagaaaatttttgttcctaattaactgtcactttcaaagttcaatgaaacattaaatgttgtttta 30388800  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||||| || ||||||||||    
T  30388801 ccaatattatgcttagttatttat 30388824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 3849045 - 3849154
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  3849045 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 3849144  T
Q  211 ccaatattat 220  Q
    ||||||||||    
T  3849145 ccaatattat 3849154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 17193138 - 17193261
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  17193138 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaaatgtcactttcaaagttcaatgcaacattaaatgttgtttta 17193237  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| ||||||||||    
T  17193238 ccaatattgtccttagttatttat 17193261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 26470984 - 26470861
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||| ||||  |||||| ||||||||| ||||| |||||||| |||||||||||||||     
T  26470984 tactccctccgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttg 26470885  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  26470884 ccaatattatccttagttatttat 26470861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 239
Target Start/End: Complemental strand, 22400827 - 22400697
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||| |||||||| ||||||||||||| |||||  ||||| |||| ||||| ||||||||||||||||| |||| |||||||| ||||||| ||||||    
T  22400827 agtactacctccgttcctttttaagtgtctcttttggagaaattttttgttcttatttaactgtcacttttgaagttcaatgcaacattaaatattgttt 22400728  T
Q  209 taccaatattatcctcagttatttatgatga 239  Q
    ||||||||||||||| | |||||||| ||||    
T  22400727 taccaatattatccttacttatttattatga 22400697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 1751692 - 1751569
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||| ||||  |||||||| |||||||  |||| |||||||| ||||||||||||||||    
T  1751692 tactccctccgttcctttttaagtgtcacttttgaagaaattttttgttcctatttaactttcactttcgaagttcaatgcaacattaaatgttgtttta 1751593  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| |||| | ||||||||    
T  1751592 ccaatattgtccttaattatttat 1751569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 9838383 - 9838260
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  9838383 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatgttgtttta 9838284  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| ||||||||||    
T  9838283 tcaatattacccttagttatttat 9838260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34607078 - 34607201
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||  ||||| || ||| |||||||||  |||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  34607078 tactcgctccgttcctttttaagtgtttcttttgaacaaatattttgttccaatttaactgtcacttttaaagttcaatgtaatattaaatggtgtttta 34607177  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  34607178 ccaatattatccttacttatttat 34607201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 27313478 - 27313603
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||||||||||||| |||||||||||| |||||  ||||| |||| ||||  |||||| ||||||||| ||||| || ||||| ||||||||||| ||    
T  27313478 agtactccctccgtttttttttaagtgtctcttttggagaaattttttgttcctatttaaatgtcactttcaaagttcattgcaacattaaatgttgatt 27313577  T
Q  209 taccaatattatcctcagttatttat 234  Q
    ||||||||||||||| ||||||||||    
T  27313578 taccaatattatccttagttatttat 27313603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 8992528 - 8992651
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| ||||||||||||| ||||| |||||| |||| ||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  8992528 tacttcctctgttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactatcactttcaaagttcaatgcaacattaaatgttgtttta 8992627  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| ||||||||||    
T  8992628 ctaatattatccttagttatttat 8992651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 9016975 - 9017098
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||| |||| ||| ||||||||||||| ||||| |||||| |||| ||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  9016975 tacttcctctgttcctttttaagtgtctcttttgaagaaattttttgttcatatttaactatcactttcaaagttcaatgcaacattaaatgttgtttta 9017074  T
Q  211 ccaatattatcctcagttatttat 234  Q
    | ||||||||||| ||||||||||    
T  9017075 ctaatattatccttagttatttat 9017098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 17835873 - 17835996
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||||||  |||||||||| ||||| ||| |  ||||||| |||||||||| |||||    
T  17835873 tactccctccgttcctttttaagtgtcacttttggagaaaaattttgttcctatttaactgttactttcaaattttaatgcaacattaaatgttttttta 17835972  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  17835973 ccaatattatccttaattatttat 17835996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 23777273 - 23777388
Alignment:
Q  109 aagtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtt 207  Q
    |||||||||||||||| |||||||||||||| ||||  ||||| |||| ||||  |||||||| |||||||  |||| |||||||| |||||||||||||    
T  23777273 aagtactccctccgttcctttttaagtgtcaattttggagaaattttttgttcctatttaactatcactttcgaagttcaatgcaacattaaatgttgtt 23777372  T
Q  208 ttaccaatattatcct 223  Q
    ||||||||||||||||    
T  23777373 ttaccaatattatcct 23777388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 24663359 - 24663482
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||| ||||||||  ||||||||||  |||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  24663359 tactccatccgttcctttttaagtatcacttttggagaaaatttttattcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 24663458  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||||||| | || ||||||||||    
T  24663459 ccaatattgttcttagttatttat 24663482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 17124239 - 17124121
Alignment:
Q  118 ctccgtttctttttaagtgtcacttttca-agaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaat 215  Q
    ||||||| |||||||  ||||||||||   |||||| ||||||| | |||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  17124239 ctccgttcctttttagatgtcactttttggagaaaagttttgtttttatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaat 17124140  T
Q  216 attatcctcagttatttat 234  Q
    |||||||| ||||||||||    
T  17124139 attatccttagttatttat 17124121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 373703 - 373810
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| |||||||  ||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  373703 tactctctccgttcatttttaagtgtcacttttggagaaattttttgttcatatttaactgtcactttcaaagttcaatgcaattttaaatgttgtttta 373802  T
Q  211 ccaatatt 218  Q
    ||||||||    
T  373803 ccaatatt 373810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 22784929 - 22784806
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| ||| || ||||||||||||| ||||| |||||  ||||  | || |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  22784929 tactccttcctttcctttttaagtgtctcttttgaagaatttttttgtttctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 22784830  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| | ||||||||    
T  22784829 ccaatattatccttacttatttat 22784806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 23923974 - 23923851
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||| | |||| ||||  |||||||||||||||| ||||| |||| |||  ||||||| |||||||    
T  23923974 tactccctccgttcctttttaagtgtcacttttggagagattttttgttcctatttaactgtcactttcaaagttcaatacaacgttaaatgctgtttta 23923875  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| ||||||||||    
T  23923874 tcaatattatccttagttatttat 23923851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 24356315 - 24356192
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatt-ttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||| ||||||||||  ||||| || ||||||  |||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  24356315 tactccctccgttcctttttaattgtcacttttagagaaatttattgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttgtttta 24356216  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||| || |||||||    
T  24356215 tcaatattacccttagatatttat 24356192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 31854752 - 31854629
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaa-ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||| ||||||  |||||| ||||||| | |||||| ||||||||| ||||| |||||||| | |||||||| |||||    
T  31854752 tactccctccgttcctttttaagtgttacttttggagaaaaattttgtttttatttaattgtcactttcaaagttcaatgcaacaataaatgttatttta 31854653  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  31854652 ccaacattacccttagttatttat 31854629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 19755330 - 19755412
Alignment:
Q  20 gaatgaaagattaatagttgaaaaatgtaataggatgataaatataattgtcaaatattgaaaaatgccatggcatccaacca 102  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  19755330 gaatgaaagatgaatagtagacaaatgtaataggatgataaatataattgtcaaacattgaaacatgcctcggcatccaacca 19755412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 3621584 - 3621693
Alignment:
Q  126 ctttttaagtgtcacttttcaagaaaa--ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcct 223  Q
    ||||||||||||||||||| |||||||  |||  |||| |||||||| ||||||| ||||| |||||||| ||||||| ||||| |||||||||||||||    
T  3621584 ctttttaagtgtcacttttgaagaaaaaatttatttct-atttaactatcactttcaaagttcaatgcaacattaaatattgttctaccaatattatcct 3621682  T
Q  224 cagttatttat 234  Q
     ||||||||||    
T  3621683 tagttatttat 3621693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 17251513 - 17251394
Alignment:
Q  116 ccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaa 214  Q
    |||||||||  ||||||| | |||||||| |||||| |||| ||||  ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  17251513 ccctccgttcttttttaattatcacttttgaagaaattttttgttcctatttaaccgtcactttcaaagttcaatgcaacattaaatgttgttttaccaa 17251414  T
Q  215 tattatcctcagttatttat 234  Q
    ||||| ||| || |||||||    
T  17251413 tattacccttagatatttat 17251394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34378839 - 34378962
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| |||||| |||||||||||||| ||||  || |||| ||||||   |||||||||||||||| ||||| |||||||| | ||||||||||||||    
T  34378839 tactccatccgttcctttttaagtgtcatttttggaaaaaaaatttgtttctatttaactgtcactttcaaagttcaatgcaacaataaatgttgtttta 34378938  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  34378939 ccaacattacccttagttatttat 34378962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 12732157 - 12732278
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttac 211  Q
    |||||||||| ||||||||||||| |  ||||  |  ||||||||||||  |||||||||||||||| |||||  |||| || |||||||||||||||||    
T  12732157 tactccctccatttctttttaagtatatctttggagaaaaattttgttcctatttaactgtcactttcaaagtttaatgtaacattaaatgttgttttac 12732256  T
Q  212 caatattatcctcagttatttat 234  Q
    || ||||||||| ||||||||||    
T  12732257 cactattatcct-agttatttat 12732278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 11431368 - 11431295
Alignment:
Q  161 tcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  11431368 tcatttaattgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattaaccttagttatttat 11431295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 34730540 - 34730663
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||  ||||| || ||| ||||||||   |||||||||||||||||||||| ||| | || |||||||| |||||||    
T  34730540 tactcgctccgttcctttttaagtgtttcttttgaacaaatattttgtttcaatttaactgtcacttttaaagttcaacgtaacattaaatggtgtttta 34730639  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| | ||||||||    
T  34730640 tcaatattatccttacttatttat 34730663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 7632245 - 7632175
Alignment:
Q  164 tttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||| ||||| ||| |||| ||||||| ||||||||||||||||||||| ||||||||||    
T  7632245 tttaactgtcactttcaaagttcaaagcaacattaaatattgttttaccaatattatccttagttatttat 7632175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 33260722 - 33260788
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    ||||||||  |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  33260722 ttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatatta 33260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 7235435 - 7235543
Alignment:
Q  128 ttttaagtgtcacttttcaagaaaat--tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctca 225  Q
    |||||||||||| |||| |||||||   ||| || | |||||||||||||||| |||||  |||| |||||||||||||||||||| ||||||| ||| |    
T  7235435 ttttaagtgtcatttttgaagaaaaaaatttattttaatttaactgtcactttcaaagtttaatgtaatattaaatgttgttttactaatattaccctta 7235534  T
Q  226 gttatttat 234  Q
    |||||||||    
T  7235535 gttatttat 7235543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 8176416 - 8176536
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||| |||| ||||||||||||| ||||| |||||| |||| ||||  |||||||||||||||| ||||| |||||||  ||||||   |||||||    
T  8176416 tactcccttcgttcctttttaagtgtctcttttgaagaaattttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaa---tgtttta 8176512  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||| |  |||||||||    
T  8176513 ccaatattatcttttgttatttat 8176536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 24635688 - 24635811
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||| |||||  ||||| ||||  | || |||||||||||| ||| ||||| ||||| || | | ||||||||||||    
T  24635688 tactccctccgttcctttttaagtgtcccttttggagaaattttttgtttctatttaactgtcattttcaaagttcaatgtaacaatgaatgttgtttta 24635787  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  24635788 ccaacattacccttagttatttat 24635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 30237010 - 30237081
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||| | |||||||| |||||| |||||||||||||||||| ||| ||||||||||    
T  30237010 atttaactgtcactttcaaaattcaatgcaacattaaacgttgttttaccaatattacccttagttatttat 30237081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 364797 - 364696
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttg-ttttaccaata 216  Q
    |||||| |||||||||||||||||||  |||||||||| |||   |||||||||||| ||| ||| | |||||||| ||||||||||| |||||||||||    
T  364797 tccgttcctttttaagtgtcacttttggagaaaatttttgttactatttaactgtcattttcaaaattcaatgcaacattaaatgttgtttttaccaata 364698  T
Q  217 tt 218  Q
    ||    
T  364697 tt 364696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 11676873 - 11676766
Alignment:
Q  111 gtactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| |||||||  ||| |||||| |||||| |||| ||||  |||||||||||||||  ||||| |||||||| |||||||||| ||||    
T  11676873 gtactccctccgttcctttttat-tgtaacttttaaagaaattttttgttcctatttaactgtcacttc-aaagttcaatgcaacattaaatgttatttt 11676776  T
Q  210 accaatatta 219  Q
    ||||||||||    
T  11676775 accaatatta 11676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 30416284 - 30416212
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttatg 235  Q
    |||||||||| ||||| ||||| |||||||| |||||||| ||||||| |||||||| ||| |||||||||||    
T  30416284 atttaactgttactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttagttatttatg 30416212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 32359695 - 32359576
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttc-aagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||| ||| ||| |||||||| ||||||  || ||||  ||||||| |||||||||||||||| ||||| |||||||| ||||||| ||||||||    
T  32359695 tactccctctgttccttgttaagtgttacttttggaaaaaaaaattgttct-atttaactgtcactttcaaagttcaatgcaacattaaat-ttgtttta 32359598  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||  |||||||| ||||||||||    
T  32359597 cca--attatccttagttatttat 32359576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 52695 - 52766
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||||||||| |||||||| |||||||  ||||||| |||||||| ||| | ||||||||    
T  52695 atttaactgtcacttttaaagttcaatgcaacattaaattatgttttatcaatattacccttaattatttat 52766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 1252147 - 1252262
Alignment:
Q  113 actccctccgtttctttttaagtgtcacttttcaagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||||  || |||||||||||||| ||||  | ||||  ||||||  |||||| ||||  ||| ||||| |||||||| ||||||| ||||||||||    
T  1252147 actccctctattcctttttaagtgtcatttttggaaaaaaaattgttcctatttaattgtctttttcaaagttcaatgcaacattaaatattgttttacc 1252246  T
Q  213 aatattatcctcagtt 228  Q
    ||||||||||| ||||    
T  1252247 aatattatccttagtt 1252262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 7170184 - 7170240
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||| ||| | |||||||| ||||||||||||||||||| |||||    
T  7170184 atttaactgtcactttcaaaattcaatgcaacattaaatgttgttttaccattatta 7170240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 31244958 - 31244887
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| ||||| | |||||||| ||||||||| || || |||||||    
T  31244958 atttaactgtcactttcaaagttcaatgcaacattaattcttgttttatcaatattattcttagatatttat 31244887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 22050081 - 22050135
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||| ||||||    
T  22050081 atttaactgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatat 22050135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 17601401 - 17601292
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaaga-aaattttgttctcatttaactgtcacttt-taaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||| || |||||||||||||||||||  |||    ||||||||| |||||| |||||||||  | ||| |||||||| |||||||||| ||||    
T  17601401 tactccctccattcctttttaagtgtcacttttggagattttttttgttcttatttaagtgtcactttacatagttcaatgcaacattaaatgttatttt 17601302  T
Q  210 accaatatta 219  Q
    || |||||||    
T  17601301 actaatatta 17601292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2381270 - 2381162
Alignment:
Q  112 tactccctccgtttctttttaagtgtcactttt-caagaaaattttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| |||| ||| |||||||||| ||  ||||||||||| ||| |||||||||  ||| ||||| ||||| | |||||||||| | ||||    
T  2381270 tactctctccgttcctttataattgtcacttttgcataaaaattttgttttcaattaactgtcgttttcaaagttcaatgtattattaaatgtggcttta 2381171  T
Q  211 ccaatatta 219  Q
    || ||||||    
T  2381170 cctatatta 2381162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 19645933 - 19645846
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatatta 198  Q
    ||||||||| ||| |||||||||||||||||||  |||||  |||||||   |||||||||||||||| ||||  |||||||| ||||    
T  19645933 tactccctctgttcctttttaagtgtcacttttggagaaattttttgtttctatttaactgtcactttcaaaggtcaatgcaacatta 19645846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 1249588 - 1249642
Alignment:
Q  180 aaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||| |||| |||| ||||||||||||||| |||||||| ||| ||||||||||    
T  1249588 aaagttcaattcaattttaaatgttgttttatcaatattacccttagttatttat 1249642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 7056343 - 7056278
Alignment:
Q  169 ctgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||| ||| | |||| ||| ||||||||||| |||| |||||||||| | ||||||||||    
T  7056343 ctgtcactttcaaaattcaatccaacattaaatgttgatttatcaatattatctttagttatttat 7056278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 19811990 - 19812059
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||| ||||| |||| ||| ||||||||||||||| ||  ||||| ||| | ||||||||    
T  19811990 ttaactgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttaattatttat 19812059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 24948275 - 24948331
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatatta 219  Q
    |||||||||||||||| ||| | |||||||| |||||||  |||||||| |||||||    
T  24948275 atttaactgtcactttcaaaattcaatgcaacattaaatagtgttttactaatatta 24948331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 232 - 105
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa---attt--tgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgt 206  Q
    ||||||||||||| ||||||||||||| ||||| ||||||   ||||  |||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  232 tactccctccgttcctttttaagtgtctcttttaaagaaattaatttgttgttcttatttaactgtcactttcaaagttcaatgcaacattaaatgttgt 133  T
Q  207 tttaccaatattatcctcagttatttat 234  Q
    ||||||||||||||||| ||||||||||    
T  132 tttaccaatattatccttagttatttat 105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 49127 - 49250
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||| || ||| |||||||||||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  49127 tactccatcagttcctttttaagtgtcacttttggagaaattttttgttcctatttaactgtcactttcaaagttcaatgcaacattaaatgttgtttta 49226  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  49227 ccaatattatccttagttatttat 49250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 72208 - 72085
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||| |||||||||||  |||||  ||||| |||| ||||| |||||| ||||||||| ||||| |||||||| ||||||||||| ||||    
T  72208 tactccctccgtttttttttaagtgtatcttttggagaaattttttgttcttatttaattgtcactttcaaagttcaatgcaacattaaatgttgattta 72109  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||||||| ||||||||||    
T  72108 ccaatattatccttagttatttat 72085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 26381 - 26265
Alignment:
Q  119 tccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatat 217  Q
    |||||| |||||||||||||||||||  ||||||  ||||||   |||||| ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  26381 tccgttcctttttaagtgtcacttttggagaaaaaatttgtttctatttaattgtcacttttaaagttcaatgcaacattaaatgttgttttaccaatat 26282  T
Q  218 tatcctcagttatttat 234  Q
    | |||| ||||||||||    
T  26281 tgtccttagttatttat 26265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 147387 - 147266
Alignment:
Q  114 ctccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttacc 212  Q
    ||||||||||| |||||||| ||||||||||  ||||| |||| ||||  |||||||||||||||| ||||| |||||||| |||||||||||||||| |    
T  147387 ctccctccgttcctttttaattgtcacttttagagaaattttttgttcatatttaactgtcactttcaaagttcaatgcaacattaaatgttgttttatc 147288  T
Q  213 aatattatcctcagttatttat 234  Q
    ||||||| ||| || |||||||    
T  147287 aatattacccttagatatttat 147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 2839 - 2910
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  2839 atttaactgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttat 2910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 14982 - 14859
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaatttt-gttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| ||||||||||||||||||   ||||| |||| ||||  |||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  14982 tactccctccgttcctttttaagtgtcactttcggagaaactttttgttccaatttaactgtcactttcaaagttcaatgcaactttaaatgttgtttta 14883  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||| ||  ||||||||||    
T  14882 tcaatattacccctagttatttat 14859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 295 - 403
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||||||||||| ||||||||||  ||||||  ||||||   |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  295 tactccctccgtttctttttaattgtcacttttagagaaaaaatttgttactatttaattgtcactttcaaagttcaatgcaacattaaatgttgtttta 394  T
Q  211 ccaatatta 219  Q
    |||| ||||    
T  395 ccaaaatta 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 184388 - 184265
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaattttg-ttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||  |||  ||||||||||| |||| ||||| |||||||| | ||||| ||||||||    
T  184388 tactccctccgttcctttttaagtgtcacttttggagaaattttttattcctatttaactgtcgctttcaaagttcaatgcaacaataaatattgtttta 184289  T
Q  211 ccaatattatcctcagttatttat 234  Q
    |||| |||| ||| ||||||||||    
T  184288 ccaacattacccttagttatttat 184265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 77120 - 77191
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  77120 atttaactgtcactttcaaagtccaatgcaatattaaatgttgttttactaatattatctttagttatttat 77191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 8152 - 8257
Alignment:
Q  130 ttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagtt 228  Q
    ||||||||||||||| |||||| ||||  | || |||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||| | || ||||    
T  8152 ttaagtgtcacttttgaagaaattttttgtttctatttaactgtcattttcaaagttcaatgcaacattaaatgttgttttaccaatattcttcttagtt 8251  T
Q  229 atttat 234  Q
    ||||||    
T  8252 atttat 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 500 - 377
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaa-attttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||| ||||||| ||||||||||||  ||||| || ||| ||||||||   |||||||||||||||||||||| ||| | || |||||||| |||||||    
T  500 tactcgctccgttcctttttaagtgtttcttttgaacaaatattttgtttcaatttaactgtcacttttaaagttcaacgtaacattaaatggtgtttta 401  T
Q  211 ccaatattatcctcagttatttat 234  Q
     |||||||||||| | ||||||||    
T  400 tcaatattatccttacttatttat 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 30953 - 30830
Alignment:
Q  112 tactccctccgtttctttttaagtgtcacttttcaagaaaat-tttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    |||||||||||||  ||||||| ||||||||||  ||||||  |||||||  | |||||||||||||| ||||| ||||| || |||||||| |||||||    
T  30953 tactccctccgttcttttttaactgtcacttttagagaaaaaatttgttcctaattaactgtcactttcaaagttcaatgtaacattaaatgatgtttta 30854  T
Q  211 ccaatattatcctcagttatttat 234  Q
    ||||||||| ||| || |||||||    
T  30853 ccaatattacccttagatatttat 30830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 7446 - 7527
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||  |||||||||||||||| ||||| |||||||  |||||||||| ||||| |||||||| ||| || |||||||    
T  7446 ttttgttcctatttaactgtcactttcaaagttcaatgcatcattaaatgttattttatcaatattacccttagatatttat 7527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 1065 - 1136
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||| ||| ||||| |||| ||| ||||||| || |||||||||||||| ||| ||||||||||    
T  1065 atttaactgtcattttcaaagttcaatacaacattaaatattattttaccaatattaaccttagttatttat 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 6564 - 6493
Alignment:
Q  163 atttaactgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    |||||||||||| ||| ||||| |||| ||| ||||||| || |||||||||||||| ||| ||||||||||    
T  6564 atttaactgtcattttcaaagttcaatacaacattaaatattattttaccaatattaaccttagttatttat 6493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 4538 - 4595
Alignment:
Q  153 ttttgttctcatttaactgtcacttttaaagtacaatgcaatattaaatgttgtttta 210  Q
    ||||||| | |||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  4538 ttttgtttttatttaactgtcactttcaaagttcaatgcaacattaaatgatgtttta 4595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 23114 - 23239
Alignment:
Q  110 agtactccctccgtttctttttaagtgtcacttttcaagaaaattttgttctc-atttaactgtcacttttaaagtacaatgcaatattaaatgttgttt 208  Q
    |||||| |||| || ||||||||| ||||| |||| |||||||||||  | || | |||| ||||||||| ||||| |||| ||| ||||||||||||||    
T  23114 agtactacctctgtgtctttttaattgtcatttttgaagaaaatttttgtttctaattaagtgtcactttcaaagttcaatacaacattaaatgttgttt 23213  T
Q  209 taccaatattatcctcagttatttat 234  Q
    |  || ||||| |||  |||||||||    
T  23214 tgtcattattacccttggttatttat 23239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 601 - 655
Alignment:
Q  180 aaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||| ||||||||||||||||||||||||  |||||||| ||| | ||||||||    
T  601 aaagttcaatgcaatattaaatgttgttttttcaatattacccttaattatttat 655  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 96268 - 96224
Alignment:
Q  165 ttaactgtcacttttaaagtacaatgcaatattaaatgttgtttt 209  Q
    |||||||||||||| ||||| |||| ||| |||||||||||||||    
T  96268 ttaactgtcactttcaaagttcaatacaacattaaatgttgtttt 96224  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 419694 - 419630
Alignment:
Q  170 tgtcacttttaaagtacaatgcaatattaaatgttgttttaccaatattatcctcagttatttat 234  Q
    ||||||||| ||| | ||||||||  ||||||||||||||| ||||||||  || ||||||||||    
T  419694 tgtcactttcaaaattcaatgcaactttaaatgttgttttatcaatattactcttagttatttat 419630  T

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