View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1904_high_25 (Length: 239)

Name: NF1904_high_25
Description: NF1904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1904_high_25
NF1904_high_25
[»] scaffold0037 (2 HSPs)
scaffold0037 (33-224)||(23276-23483)
scaffold0037 (34-96)||(22337-22399)
[»] chr8 (33 HSPs)
chr8 (32-224)||(38855909-38856116)
chr8 (131-224)||(21672978-21673071)
chr8 (142-224)||(23761544-23761625)
chr8 (32-100)||(23761680-23761748)
chr8 (33-96)||(6518720-6518783)
chr8 (31-95)||(362478-362543)
chr8 (31-95)||(8730337-8730402)
chr8 (32-95)||(20493475-20493538)
chr8 (32-85)||(21285253-21285306)
chr8 (43-96)||(23777661-23777714)
chr8 (32-96)||(21672866-21672930)
chr8 (34-85)||(41597371-41597423)
chr8 (34-85)||(45291609-45291661)
chr8 (34-96)||(21162897-21162959)
chr8 (34-96)||(21169533-21169595)
chr8 (34-96)||(44475146-44475208)
chr8 (34-96)||(44478408-44478470)
chr8 (32-88)||(32806799-32806856)
chr8 (32-91)||(17440368-17440428)
chr8 (32-91)||(19155735-19155795)
chr8 (32-91)||(21589493-21589553)
chr8 (34-85)||(22964990-22965041)
chr8 (124-183)||(21162794-21162855)
chr8 (124-183)||(21169430-21169491)
chr8 (36-72)||(5610987-5611024)
chr8 (32-65)||(6519783-6519816)
chr8 (126-185)||(18819127-18819188)
chr8 (126-185)||(23405731-23405792)
chr8 (34-89)||(13508909-13508965)
chr8 (34-89)||(13598439-13598495)
chr8 (126-185)||(17140271-17140331)
chr8 (126-185)||(18879928-18879988)
chr8 (32-95)||(23479544-23479608)
[»] chr6 (39 HSPs)
chr6 (32-224)||(27333824-27334031)
chr6 (32-224)||(27394564-27394771)
chr6 (32-107)||(25957805-25957880)
chr6 (32-107)||(25965852-25965927)
chr6 (33-117)||(19651429-19651513)
chr6 (33-93)||(22081571-22081631)
chr6 (32-96)||(24265690-24265754)
chr6 (37-91)||(23018612-23018666)
chr6 (31-95)||(12940431-12940496)
chr6 (126-185)||(25630063-25630122)
chr6 (124-211)||(20108449-20108537)
chr6 (32-96)||(1642856-1642920)
chr6 (32-85)||(23535302-23535356)
chr6 (32-85)||(18318484-18318537)
chr6 (32-85)||(18321884-18321937)
chr6 (32-100)||(25643532-25643601)
chr6 (31-95)||(28291698-28291763)
chr6 (34-85)||(8230428-8230480)
chr6 (36-96)||(9101419-9101479)
chr6 (32-96)||(19954376-19954439)
chr6 (32-98)||(13018700-13018767)
chr6 (45-95)||(22781041-22781091)
chr6 (45-99)||(20593060-20593116)
chr6 (34-85)||(16493582-16493634)
chr6 (32-96)||(19667585-19667649)
chr6 (131-185)||(19651543-19651598)
chr6 (32-95)||(20108344-20108407)
chr6 (29-91)||(27574149-27574212)
chr6 (32-85)||(4644673-4644727)
chr6 (38-96)||(18404003-18404060)
chr6 (45-87)||(20075942-20075984)
chr6 (45-95)||(20639094-20639144)
chr6 (32-91)||(15688697-15688757)
chr6 (38-85)||(16015862-16015910)
chr6 (34-85)||(17201352-17201404)
chr6 (142-185)||(22081463-22081507)
chr6 (126-185)||(28497183-28497243)
chr6 (126-185)||(29809594-29809654)
chr6 (32-95)||(35137624-35137688)
[»] chr4 (41 HSPs)
chr4 (32-224)||(14928449-14928657)
chr4 (33-224)||(15993681-15993886)
chr4 (32-117)||(39707105-39707190)
chr4 (32-117)||(46641794-46641879)
chr4 (142-224)||(15090684-15090766)
chr4 (32-117)||(16375625-16375710)
chr4 (35-117)||(15189059-15189141)
chr4 (32-117)||(56116957-56117042)
chr4 (34-100)||(12773319-12773385)
chr4 (131-224)||(12773429-12773520)
chr4 (32-89)||(43199398-43199455)
chr4 (32-95)||(14700-14763)
chr4 (31-95)||(15532429-15532494)
chr4 (32-100)||(8842236-8842304)
chr4 (124-211)||(14570-14658)
chr4 (127-185)||(44674956-44675014)
chr4 (124-180)||(16375545-16375602)
chr4 (124-218)||(39706991-39707082)
chr4 (32-95)||(13843469-13843533)
chr4 (45-99)||(15090574-15090627)
chr4 (34-96)||(16349462-16349524)
chr4 (32-89)||(17995153-17995211)
chr4 (54-100)||(52874016-52874062)
chr4 (32-89)||(52244040-52244097)
chr4 (34-85)||(3826017-3826069)
chr4 (32-91)||(10697184-10697244)
chr4 (32-91)||(10910953-10911013)
chr4 (32-96)||(12289036-12289100)
chr4 (32-88)||(14163767-14163822)
chr4 (34-85)||(15898602-15898654)
chr4 (126-185)||(44052191-44052251)
chr4 (48-95)||(22631795-22631842)
chr4 (48-95)||(22632713-22632760)
chr4 (124-182)||(56116875-56116934)
chr4 (34-96)||(16357750-16357812)
chr4 (32-91)||(13593520-13593580)
chr4 (32-88)||(14157062-14157117)
chr4 (34-85)||(14279577-14279629)
chr4 (32-91)||(19608510-19608570)
chr4 (34-85)||(20149091-20149143)
chr4 (124-211)||(52243916-52244004)
[»] chr1 (40 HSPs)
chr1 (32-224)||(22922567-22922773)
chr1 (124-224)||(46431447-46431547)
chr1 (32-117)||(46432664-46432749)
chr1 (124-224)||(52928661-52928761)
chr1 (124-224)||(33680329-33680429)
chr1 (32-117)||(35983024-35983108)
chr1 (32-117)||(13513218-13513303)
chr1 (32-100)||(22236853-22236921)
chr1 (32-117)||(20247526-20247611)
chr1 (131-224)||(22236965-22237057)
chr1 (32-97)||(52928815-52928880)
chr1 (32-100)||(33680223-33680291)
chr1 (32-97)||(21753280-21753344)
chr1 (32-96)||(19208425-19208489)
chr1 (32-95)||(43689755-43689819)
chr1 (32-96)||(51325680-51325744)
chr1 (32-95)||(21897103-21897166)
chr1 (127-185)||(21709330-21709388)
chr1 (127-185)||(21713873-21713931)
chr1 (124-184)||(21897000-21897061)
chr1 (32-96)||(22356742-22356806)
chr1 (32-96)||(22358428-22358492)
chr1 (31-82)||(20439970-20440021)
chr1 (32-89)||(8881652-8881710)
chr1 (32-96)||(16369142-16369207)
chr1 (34-85)||(13213712-13213764)
chr1 (34-85)||(21704295-21704347)
chr1 (32-96)||(35261865-35261929)
chr1 (34-85)||(40388416-40388468)
chr1 (34-85)||(12270503-12270554)
chr1 (29-91)||(46199562-46199629)
chr1 (34-96)||(22450041-22450103)
chr1 (32-65)||(16757858-16757891)
chr1 (32-96)||(26064164-26064229)
chr1 (32-64)||(12204462-12204494)
chr1 (34-85)||(20847948-20848000)
chr1 (34-85)||(20915516-20915568)
chr1 (126-185)||(21753390-21753450)
chr1 (126-185)||(22359419-22359479)
chr1 (40-91)||(25264111-25264163)
[»] chr3 (58 HSPs)
chr3 (32-117)||(14233685-14233770)
chr3 (32-117)||(15467108-15467193)
chr3 (32-115)||(1466734-1466817)
chr3 (124-224)||(16096699-16096798)
chr3 (131-216)||(25477065-25477150)
chr3 (34-98)||(49971109-49971173)
chr3 (32-116)||(49390943-49391026)
chr3 (32-114)||(12268408-12268491)
chr3 (48-117)||(15060942-15061013)
chr3 (32-100)||(16096593-16096661)
chr3 (34-100)||(1645494-1645560)
chr3 (32-117)||(9512172-9512257)
chr3 (32-117)||(9520147-9520232)
chr3 (32-117)||(12936428-12936513)
chr3 (31-95)||(12303786-12303851)
chr3 (31-95)||(14765599-14765664)
chr3 (31-95)||(36979659-36979724)
chr3 (31-95)||(37005098-37005163)
chr3 (31-95)||(51298744-51298809)
chr3 (32-100)||(32306908-32306976)
chr3 (36-117)||(16103034-16103116)
chr3 (32-117)||(49668860-49668945)
chr3 (31-95)||(9531468-9531533)
chr3 (32-95)||(18440747-18440811)
chr3 (32-95)||(19485821-19485885)
chr3 (32-95)||(52524577-52524640)
chr3 (32-114)||(12175056-12175141)
chr3 (45-100)||(17498607-17498663)
chr3 (34-85)||(22148706-22148758)
chr3 (126-218)||(15467218-15467309)
chr3 (34-96)||(14447395-14447457)
chr3 (54-100)||(17487135-17487181)
chr3 (30-91)||(51157698-51157764)
chr3 (32-96)||(607172-607237)
chr3 (143-211)||(17661593-17661661)
chr3 (32-89)||(17661732-17661789)
chr3 (34-85)||(8898273-8898325)
chr3 (126-185)||(12398561-12398621)
chr3 (34-85)||(37643417-37643469)
chr3 (126-185)||(49668775-49668835)
chr3 (131-185)||(12936343-12936398)
chr3 (33-91)||(15448849-15448908)
chr3 (32-98)||(37251954-37252021)
chr3 (131-185)||(49390858-49390913)
chr3 (32-85)||(23273931-23273985)
chr3 (53-91)||(55319306-55319344)
chr3 (142-182)||(15061054-15061095)
chr3 (37-85)||(17736460-17736509)
chr3 (37-85)||(19037729-19037778)
chr3 (36-72)||(22791033-22791070)
chr3 (126-185)||(13211039-13211099)
chr3 (142-185)||(16103157-16103201)
chr3 (29-91)||(22650790-22650858)
chr3 (32-64)||(24154058-24154090)
chr3 (131-185)||(26682703-26682759)
chr3 (38-85)||(27901599-27901647)
chr3 (32-64)||(30176316-30176348)
chr3 (32-91)||(31225810-31225870)
[»] scaffold0333 (1 HSPs)
scaffold0333 (32-224)||(5819-6029)
[»] chr7 (50 HSPs)
chr7 (32-185)||(18004868-18005038)
chr7 (124-224)||(811832-811934)
chr7 (34-117)||(14982598-14982682)
chr7 (34-117)||(15412209-15412293)
chr7 (32-117)||(9391033-9391118)
chr7 (32-117)||(47831007-47831092)
chr7 (32-100)||(44013409-44013477)
chr7 (32-95)||(16220568-16220631)
chr7 (29-95)||(23667139-23667206)
chr7 (31-95)||(11301629-11301694)
chr7 (31-95)||(15165463-15165528)
chr7 (32-85)||(22072208-22072261)
chr7 (32-100)||(66976-67044)
chr7 (32-96)||(12900529-12900593)
chr7 (32-96)||(14158035-14158099)
chr7 (32-95)||(37726115-37726178)
chr7 (142-211)||(2282969-2283038)
chr7 (32-117)||(811957-812041)
chr7 (35-95)||(10898704-10898765)
chr7 (31-95)||(14564440-14564505)
chr7 (32-89)||(16055534-16055591)
chr7 (31-95)||(6320689-6320755)
chr7 (126-181)||(15164334-15164389)
chr7 (32-95)||(37728953-37729016)
chr7 (34-85)||(29329791-29329843)
chr7 (34-89)||(15115402-15115457)
chr7 (124-218)||(16220433-16220526)
chr7 (31-95)||(29794515-29794581)
chr7 (31-95)||(29798334-29798400)
chr7 (127-185)||(14194336-14194394)
chr7 (131-181)||(15144754-15144804)
chr7 (127-185)||(18155574-18155632)
chr7 (34-96)||(18870541-18870603)
chr7 (34-91)||(44115741-44115799)
chr7 (36-89)||(2283115-2283168)
chr7 (32-92)||(15009333-15009394)
chr7 (32-97)||(19158848-19158913)
chr7 (32-97)||(20758247-20758312)
chr7 (34-85)||(19487838-19487890)
chr7 (34-85)||(26211238-26211290)
chr7 (34-89)||(15111827-15111882)
chr7 (131-180)||(67088-67138)
chr7 (32-91)||(9643666-9643726)
chr7 (34-85)||(10064961-10065013)
chr7 (32-91)||(11092365-11092425)
chr7 (126-185)||(12698185-12698245)
chr7 (32-91)||(14275105-14275165)
chr7 (34-85)||(15087147-15087199)
chr7 (32-91)||(16997557-16997617)
chr7 (32-64)||(18457262-18457294)
[»] scaffold0023 (4 HSPs)
scaffold0023 (32-224)||(99565-99771)
scaffold0023 (32-117)||(100771-100856)
scaffold0023 (131-224)||(40792-40885)
scaffold0023 (32-100)||(40929-40997)
[»] scaffold0476 (1 HSPs)
scaffold0476 (32-224)||(11981-12190)
[»] scaffold0621 (4 HSPs)
scaffold0621 (131-224)||(1444-1538)
scaffold0621 (131-224)||(5861-5955)
scaffold0621 (32-100)||(1331-1400)
scaffold0621 (32-100)||(5748-5817)
[»] scaffold0207 (3 HSPs)
scaffold0207 (131-224)||(3333-3425)
scaffold0207 (32-98)||(3471-3537)
scaffold0207 (34-96)||(4718-4780)
[»] chr5 (43 HSPs)
chr5 (32-117)||(21742833-21742918)
chr5 (33-117)||(29916395-29916479)
chr5 (131-224)||(21564880-21564972)
chr5 (32-117)||(22960334-22960419)
chr5 (34-100)||(19668129-19668195)
chr5 (32-89)||(26012870-26012927)
chr5 (31-93)||(41862620-41862683)
chr5 (32-97)||(21330356-21330422)
chr5 (34-100)||(21564770-21564836)
chr5 (31-95)||(9774270-9774335)
chr5 (32-89)||(22141999-22142056)
chr5 (124-218)||(21330212-21330303)
chr5 (31-95)||(37606579-37606644)
chr5 (34-100)||(9077190-9077255)
chr5 (29-85)||(41096467-41096524)
chr5 (32-95)||(5890526-5890590)
chr5 (34-85)||(10776546-10776598)
chr5 (34-85)||(14047315-14047367)
chr5 (32-91)||(20298593-20298653)
chr5 (44-96)||(21275641-21275693)
chr5 (34-85)||(21731094-21731146)
chr5 (34-85)||(21809214-21809266)
chr5 (29-91)||(261821-261888)
chr5 (44-95)||(21886525-21886576)
chr5 (34-96)||(19509766-19509828)
chr5 (34-96)||(21367464-21367526)
chr5 (33-91)||(21876760-21876818)
chr5 (127-185)||(26703443-26703501)
chr5 (127-185)||(26973176-26973234)
chr5 (31-96)||(38147190-38147256)
chr5 (32-89)||(20032530-20032587)
chr5 (34-85)||(18319839-18319891)
chr5 (44-91)||(21872491-21872538)
chr5 (45-95)||(8287647-8287697)
chr5 (32-89)||(24211792-24211850)
chr5 (54-100)||(25430662-25430708)
chr5 (31-65)||(42958871-42958905)
chr5 (32-85)||(21503029-21503082)
chr5 (142-218)||(5890391-5890468)
chr5 (34-85)||(18417346-18417398)
chr5 (124-211)||(22142115-22142203)
chr5 (34-85)||(24066413-24066465)
chr5 (38-85)||(36155474-36155522)
[»] chr2 (40 HSPs)
chr2 (31-224)||(19795329-19795538)
chr2 (124-218)||(7678931-7679025)
chr2 (32-211)||(24689010-24689204)
chr2 (131-216)||(23059863-23059948)
chr2 (32-100)||(28405225-28405292)
chr2 (32-117)||(22134988-22135073)
chr2 (31-95)||(10687050-10687115)
chr2 (32-95)||(8572-8635)
chr2 (32-87)||(23713748-23713803)
chr2 (32-97)||(7678814-7678878)
chr2 (31-95)||(20259467-20259532)
chr2 (31-95)||(23866836-23866901)
chr2 (32-96)||(22413982-22414046)
chr2 (34-89)||(19819896-19819951)
chr2 (32-96)||(8905946-8906011)
chr2 (31-95)||(20616551-20616616)
chr2 (29-85)||(29594139-29594196)
chr2 (34-85)||(43136518-43136570)
chr2 (124-184)||(8468-8530)
chr2 (34-96)||(6481042-6481104)
chr2 (34-96)||(6484509-6484571)
chr2 (32-89)||(20634681-20634739)
chr2 (146-216)||(23066409-23066479)
chr2 (146-216)||(23075859-23075929)
chr2 (32-89)||(24316751-24316809)
chr2 (32-96)||(18787580-18787645)
chr2 (32-96)||(20520984-20521049)
chr2 (142-183)||(23030715-23030756)
chr2 (35-95)||(30647689-30647750)
chr2 (131-224)||(25175182-25175272)
chr2 (32-91)||(27471567-27471627)
chr2 (33-91)||(19203172-19203231)
chr2 (53-91)||(21918374-21918412)
chr2 (45-95)||(22732238-22732288)
chr2 (45-95)||(22738948-22738998)
chr2 (34-95)||(22799955-22800016)
chr2 (142-185)||(22134903-22134947)
chr2 (40-91)||(24669901-24669953)
chr2 (40-91)||(24680350-24680402)
chr2 (34-89)||(24947125-24947181)
[»] scaffold0034 (3 HSPs)
scaffold0034 (33-117)||(52969-53053)
scaffold0034 (32-85)||(31638-31691)
scaffold0034 (32-85)||(31732-31785)
[»] scaffold0010 (2 HSPs)
scaffold0010 (34-100)||(129138-129204)
scaffold0010 (32-96)||(118463-118528)
[»] scaffold0008 (3 HSPs)
scaffold0008 (131-224)||(15398-15490)
scaffold0008 (32-100)||(15534-15602)
scaffold0008 (34-96)||(79210-79272)
[»] scaffold0556 (1 HSPs)
scaffold0556 (32-100)||(6049-6117)
[»] scaffold0530 (4 HSPs)
scaffold0530 (32-100)||(11095-11163)
scaffold0530 (32-97)||(1898-1963)
scaffold0530 (124-218)||(1754-1845)
scaffold0530 (142-185)||(11231-11275)
[»] scaffold0102 (2 HSPs)
scaffold0102 (131-222)||(18600-18690)
scaffold0102 (32-100)||(18488-18556)
[»] scaffold0100 (3 HSPs)
scaffold0100 (32-100)||(24711-24779)
scaffold0100 (124-185)||(24611-24673)
scaffold0100 (131-185)||(17014-17070)
[»] scaffold0327 (2 HSPs)
scaffold0327 (145-224)||(4008-4087)
scaffold0327 (45-99)||(4147-4200)
[»] scaffold0278 (2 HSPs)
scaffold0278 (37-100)||(4869-4932)
scaffold0278 (131-224)||(4976-5067)
[»] scaffold0012 (4 HSPs)
scaffold0012 (33-100)||(5507-5574)
scaffold0012 (131-185)||(5407-5462)
scaffold0012 (32-89)||(221510-221567)
scaffold0012 (142-211)||(221643-221712)
[»] scaffold0001 (2 HSPs)
scaffold0001 (32-114)||(159917-159999)
scaffold0001 (126-185)||(198159-198220)
[»] scaffold0211 (1 HSPs)
scaffold0211 (32-117)||(29571-29656)
[»] scaffold0273 (2 HSPs)
scaffold0273 (32-100)||(10849-10917)
scaffold0273 (124-218)||(10708-10799)
[»] scaffold0150 (1 HSPs)
scaffold0150 (32-100)||(31353-31420)
[»] scaffold0125 (1 HSPs)
scaffold0125 (36-100)||(45115-45179)
[»] scaffold0500 (1 HSPs)
scaffold0500 (32-117)||(10129-10214)
[»] scaffold0324 (2 HSPs)
scaffold0324 (32-117)||(2926-3011)
scaffold0324 (131-185)||(3041-3096)
[»] scaffold0028 (4 HSPs)
scaffold0028 (142-224)||(40571-40651)
scaffold0028 (32-117)||(40445-40530)
scaffold0028 (32-91)||(86982-87042)
scaffold0028 (131-185)||(132062-132117)
[»] scaffold0544 (2 HSPs)
scaffold0544 (31-95)||(736-801)
scaffold0544 (31-95)||(4320-4385)
[»] scaffold0243 (2 HSPs)
scaffold0243 (32-97)||(10937-11002)
scaffold0243 (142-218)||(10794-10867)
[»] scaffold0221 (1 HSPs)
scaffold0221 (32-89)||(1156-1213)
[»] scaffold0051 (1 HSPs)
scaffold0051 (31-95)||(50084-50149)
[»] scaffold0011 (1 HSPs)
scaffold0011 (31-95)||(160738-160803)
[»] scaffold0561 (1 HSPs)
scaffold0561 (32-96)||(9638-9702)
[»] scaffold0075 (2 HSPs)
scaffold0075 (32-95)||(54398-54461)
scaffold0075 (124-211)||(54268-54356)
[»] scaffold0877 (1 HSPs)
scaffold0877 (32-89)||(77-134)
[»] scaffold0839 (1 HSPs)
scaffold0839 (29-85)||(2842-2899)
[»] scaffold0507 (1 HSPs)
scaffold0507 (32-89)||(8927-8984)
[»] scaffold0021 (1 HSPs)
scaffold0021 (32-96)||(137231-137295)
[»] scaffold0014 (2 HSPs)
scaffold0014 (32-96)||(126028-126092)
scaffold0014 (32-96)||(76943-77007)
[»] scaffold0194 (1 HSPs)
scaffold0194 (127-185)||(31853-31911)
[»] scaffold0020 (2 HSPs)
scaffold0020 (127-185)||(178225-178283)
scaffold0020 (34-89)||(97590-97646)
[»] scaffold0230 (2 HSPs)
scaffold0230 (32-85)||(21932-21985)
scaffold0230 (32-85)||(24927-24980)
[»] scaffold0078 (2 HSPs)
scaffold0078 (32-85)||(9760-9813)
scaffold0078 (124-211)||(9877-9965)
[»] scaffold0042 (1 HSPs)
scaffold0042 (33-85)||(23255-23308)
[»] scaffold0040 (1 HSPs)
scaffold0040 (32-96)||(104479-104544)
[»] scaffold0005 (1 HSPs)
scaffold0005 (32-96)||(266643-266708)
[»] scaffold0218 (1 HSPs)
scaffold0218 (32-96)||(8919-8983)
[»] scaffold0113 (2 HSPs)
scaffold0113 (34-85)||(1075-1127)
scaffold0113 (34-85)||(1604-1656)
[»] scaffold0009 (2 HSPs)
scaffold0009 (32-91)||(158389-158449)
scaffold0009 (32-95)||(84490-84553)
[»] scaffold2014 (2 HSPs)
scaffold2014 (124-182)||(349-408)
scaffold2014 (32-96)||(246-309)
[»] scaffold0357 (1 HSPs)
scaffold0357 (32-95)||(7570-7633)
[»] scaffold0088 (2 HSPs)
scaffold0088 (131-185)||(2288-2343)
scaffold0088 (142-185)||(9683-9727)
[»] scaffold0070 (2 HSPs)
scaffold0070 (45-100)||(3771-3826)
scaffold0070 (131-185)||(3870-3923)
[»] scaffold0750 (1 HSPs)
scaffold0750 (54-100)||(3141-3187)
[»] scaffold0674 (1 HSPs)
scaffold0674 (32-89)||(2801-2859)
[»] scaffold0628 (4 HSPs)
scaffold0628 (131-224)||(3779-3870)
scaffold0628 (131-224)||(8339-8430)
scaffold0628 (32-100)||(3916-3984)
scaffold0628 (32-100)||(8476-8544)
[»] scaffold0615 (1 HSPs)
scaffold0615 (34-96)||(2868-2930)
[»] scaffold0124 (1 HSPs)
scaffold0124 (54-100)||(26848-26894)
[»] scaffold0104 (1 HSPs)
scaffold0104 (34-96)||(8767-8829)
[»] scaffold0079 (2 HSPs)
scaffold0079 (34-96)||(37757-37819)
scaffold0079 (34-96)||(22926-22988)
[»] scaffold0059 (1 HSPs)
scaffold0059 (34-96)||(57926-57988)
[»] scaffold0046 (1 HSPs)
scaffold0046 (45-95)||(27737-27787)
[»] scaffold1061 (1 HSPs)
scaffold1061 (144-185)||(42-83)
[»] scaffold0161 (1 HSPs)
scaffold0161 (32-97)||(37094-37159)
[»] scaffold0080 (1 HSPs)
scaffold0080 (33-97)||(20645-20710)
[»] scaffold0022 (1 HSPs)
scaffold0022 (32-96)||(73112-73177)
[»] scaffold0964 (1 HSPs)
scaffold0964 (126-185)||(3582-3642)
[»] scaffold0820 (1 HSPs)
scaffold0820 (34-85)||(3797-3849)
[»] scaffold0810 (1 HSPs)
scaffold0810 (32-95)||(1940-2004)
[»] scaffold0647 (1 HSPs)
scaffold0647 (126-185)||(6779-6839)
[»] scaffold0434 (1 HSPs)
scaffold0434 (40-91)||(7949-8001)
[»] scaffold0403 (1 HSPs)
scaffold0403 (126-185)||(4203-4263)
[»] scaffold0293 (1 HSPs)
scaffold0293 (34-85)||(5942-5994)
[»] scaffold0247 (1 HSPs)
scaffold0247 (34-85)||(2978-3030)
[»] scaffold0007 (2 HSPs)
scaffold0007 (34-85)||(161939-161991)
scaffold0007 (34-83)||(165517-165567)
[»] scaffold0198 (1 HSPs)
scaffold0198 (127-182)||(23183-23238)
[»] scaffold0071 (1 HSPs)
scaffold0071 (33-91)||(13281-13340)
[»] scaffold0057 (1 HSPs)
scaffold0057 (29-91)||(71718-71785)
[»] scaffold0412 (1 HSPs)
scaffold0412 (34-96)||(14514-14576)
[»] scaffold0292 (2 HSPs)
scaffold0292 (45-95)||(2737-2787)
scaffold0292 (45-95)||(9774-9824)
[»] scaffold0217 (1 HSPs)
scaffold0217 (34-96)||(17421-17483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-185)||(411816-411866)
[»] scaffold0601 (1 HSPs)
scaffold0601 (53-90)||(9337-9374)
[»] scaffold0174 (1 HSPs)
scaffold0174 (33-85)||(24931-24984)
[»] scaffold0122 (2 HSPs)
scaffold0122 (45-99)||(22443-22499)
scaffold0122 (45-98)||(39517-39572)
[»] scaffold0120 (1 HSPs)
scaffold0120 (45-99)||(12568-12624)
[»] scaffold2007 (1 HSPs)
scaffold2007 (32-91)||(477-537)
[»] scaffold0825 (1 HSPs)
scaffold0825 (126-185)||(344-404)
[»] scaffold0686 (1 HSPs)
scaffold0686 (32-64)||(4889-4921)
[»] scaffold0413 (1 HSPs)
scaffold0413 (32-95)||(4829-4893)
[»] scaffold0305 (1 HSPs)
scaffold0305 (126-185)||(20037-20097)
[»] scaffold0282 (1 HSPs)
scaffold0282 (34-85)||(11780-11832)
[»] scaffold0081 (1 HSPs)
scaffold0081 (32-91)||(5540-5600)
[»] scaffold0029 (1 HSPs)
scaffold0029 (34-89)||(10586-10642)


Alignment Details
Target: scaffold0037 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 23483 - 23276
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta-------- 124  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||            
T  23483 aaacgaaatgctacacttctaaaaatcataaatgagataattaattaattatccttcaacataaatcaattccaaaacattgcagcggattaaattcatc 23384  T
Q  125 --------taagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 216  Q
            ||||| |||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23383 aacttaaataagtcttggcacgcaggcctcatcaaagcatctcataagtcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 23284  T
Q  217 taagaaat 224  Q
    ||||||||    
T  23283 taagaaat 23276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 22399 - 22337
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  |||| |||||  ||||||| ||||||||||    
T  22399 aacggaatgctacacttctaaaaatcataaaacagatgattaacaaattatctttcaacataa 22337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 38856116 - 38855909
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta------- 124  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| | ||||           
T  38856116 taaacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacattaatcaattccaaaacattgcagcggattaaattcat 38856017  T
Q  125 ---------taagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaagga 215  Q
             ||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  38856016 caacataaataagtcttggcacgcaggcctcatcaaaacatctcataaatcagttaaacaacttaatcattt-aaaatcataaaacaaatacgtaaagga 38855918  T
Q  216 ataagaaat 224  Q
    |||||||||    
T  38855917 ataagaaat 38855909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 21672978 - 21673071
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  21672978 ttggcacgcaggcctcatcaaaacatctcataaatcagttcaacaacttaatcatttaaaattcataaaacatatacgtaaaggaataagaaat 21673071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 23761625 - 23761544
Alignment:
Q  142 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||| | |||||||||||||||||||||    
T  23761625 gcctcatcaaaacatctcataaatcggttcaacaacttaatcatttgaaattcataaaa-atatacgtaaaggaataagaaat 23761544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 23761748 - 23761680
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  23761748 taaacggaatgctacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 23761680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 6518720 - 6518783
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  6518720 aaacggaatgctacacttcacaaaatcataaataagataattaactaattatccttcaacataa 6518783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 362478 - 362543
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  362478 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 362543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 8730402 - 8730337
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  8730402 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 8730337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 20493475 - 20493538
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||    
T  20493475 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacata 20493538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 21285253 - 21285306
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||||   ||||||||||||||||||||||| ||||||||    
T  21285253 taaacggaatgctacacttataaaaatcataaatgagataattaactaattatc 21285306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 23777714 - 23777661
Alignment:
Q  43 ctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||    
T  23777714 ctacacttcttaaaatcataaatgagataattaacaaattatctttcaacataa 23777661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 21672866 - 21672930
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||| |||| ||||||| ||||||    
T  21672866 taaacggaatgctacacttctaaaagtcataaatgcgataattaactaatcatccttccacataa 21672930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 41597371 - 41597423
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  41597371 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 41597423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 45291661 - 45291609
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  45291661 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 45291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21162959 - 21162897
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  21162959 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 21162897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21169595 - 21169533
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  21169595 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 21169533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 44475146 - 44475208
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  44475146 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 44475208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 44478408 - 44478470
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  44478408 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 44478470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 32806799 - 32806856
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatcctt 88  Q
    ||||||||||||||||||||  |||| |||||||||  ||||||||||||||||||||    
T  32806799 taaacggaatgctacacttctcaaaaatcataaatggaataattaattaattatcctt 32806856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 17440428 - 17440368
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  17440428 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 17440368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 19155795 - 19155735
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  19155795 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 19155735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 21589553 - 21589493
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| |||||||||  || ||||| ||||||||||||||    
T  21589553 taaacggaatgctacacttcttaaaaatcataaatggaattattaactaattatccttcaa 21589493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 22964990 - 22965041
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||    ||||||||||||||||||||||| ||||||||    
T  22964990 aacggaatgctacactcttaaaaatcataaatgagataattaactaattatc 22965041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 21162855 - 21162794
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatc 183  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||    
T  21162855 ataagtattggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatc 21162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 21169491 - 21169430
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatc 183  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||    
T  21169491 ataagtattggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatc 21169430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 5611024 - 5610987
Alignment:
Q  36 cggaatgctacacttcat-aaaatcataaatgagataa 72  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5611024 cggaatgctacacttcataaaaatcataaatgagataa 5610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 6519783 - 6519816
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaat 65  Q
    ||||||||||||||||||||| ||||||||||||    
T  6519783 taaacggaatgctacacttcacaaaatcataaat 6519816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18819188 - 18819127
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  18819188 aagtcttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 18819127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 23405731 - 23405792
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  23405731 aagtcttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 23405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 13508965 - 13508909
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||  ||| || |||| ||||||||||||||||| |||||||    
T  13508965 aacggaatgctacacttctaaaatataataagtgagataattaattaatcatccttc 13508909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 13598495 - 13598439
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||  ||| || |||| ||||||||||||||||| |||||||    
T  13598495 aacggaatgctacacttctaaaatataataagtgagataattaattaatcatccttc 13598439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 17140271 - 17140331
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||  |||||||||| |||||||||||||||| ||||    
T  17140271 aagtcttggcacgcaggcctcatcaaattatctcataaattcagttaaacaacttattcat 17140331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18879988 - 18879928
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 185  Q
    |||| |||| |||||  ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  18879988 aagtcttggcacgcagacctcatcaaaatatctcataaatccagttaaacaacttattcat 18879928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 23479608 - 23479544
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| | ||||  ||||||||||||| |||  | |||||||||||||||    
T  23479608 taaacggaatgctacacttcttaaaaaagataaatgagataaataacaatttatccttcaacata 23479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 27334031 - 27333824
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta------- 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| | ||||           
T  27334031 taaacgaaatgctacacttcataaaatcataaatgagataattaactaattatccttcaacataaatcaattccaaaacattacagcggattaaattcat 27333932  T
Q  125 ---------taagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaagga 215  Q
             ||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27333931 caacaaaaataagtcttggcacgcaggcctcatcaaaacatctcctaaatcagttaaacaacttaatcattt-aaactcataaaacaaatacgtaaagga 27333833  T
Q  216 ataagaaat 224  Q
    |||||||||    
T  27333832 ataagaaat 27333824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 27394771 - 27394564
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta------- 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| | ||||           
T  27394771 taaacgaaatgctacacttcataaaatcataaatgagataattaactaattatccttcaacataaatcaattccaaaacattacagcggattaaattcat 27394672  T
Q  125 ---------taagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaagga 215  Q
             ||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27394671 caacaaaaataagtcttggcacgcaggcctcatcaaaacatctcctaaatcagttaaacaacttaatcattt-aaactcataaaacaaatacgtaaagga 27394573  T
Q  216 ataagaaat 224  Q
    |||||||||    
T  27394572 ataagaaat 27394564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 25957880 - 25957805
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25957880 taaacggaatgctacacttcataaaatcataaatgagataattaactaattatccttcaacataaatcaattccaa 25957805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 25965927 - 25965852
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25965927 taaacggaatgctacacttcataaaatcataaatgagataattaactaattatccttcaacataaatcaattccaa 25965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 19651429 - 19651513
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||||| |||||||| |||||||||    
T  19651429 aaacggaatgctacacttca-aaaatcataaataagataattaactaattatcttccaacataaatcaaattccaaaacattgcag 19651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 22081631 - 22081571
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaaca 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  22081631 aaacggaatgctacacttcataaaatcataaatgagataattaacaaattatctttcaaca 22081571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 24265690 - 24265754
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||||    
T  24265690 taaacggaatgctacacttcttaaaatcataaatgagataaataataatttatccttcaacataa 24265754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 23018612 - 23018666
Alignment:
Q  37 ggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  23018612 ggaatgctacacttcaaaaaatcataaatgagataattaactaattatccttcaa 23018666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 12940431 - 12940496
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  12940431 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 12940496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 25630122 - 25630063
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25630122 aagtcttggcacgcaggcctcatcaaaacatctcaaaaatcagttaaacaacttaatcat 25630063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 20108449 - 20108537
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    ||||||||||| ||| | |||||||||||||||||||||||  |||||||||||||||||||| || ||  ||||||| |||||||||||    
T  20108449 ataagttttggcacgtaggcctcatcaaaacatctcataaaattcagttaaacaacttaatcaatt-aacatcataaatcaaatacgtaa 20108537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 1642856 - 1642920
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||    ||||||||||||||||    
T  1642856 taaacggaatgctacacttcttaaaatcataaatgagataaataacattttatccttcaacataa 1642920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 23535356 - 23535302
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  23535356 taaacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 23535302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 18318484 - 18318537
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  18318484 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 18318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 18321884 - 18321937
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  18321884 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 18321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 25643532 - 25643601
Alignment:
Q  32 taaacggaatgctacacttcataaaatca-taaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||| ||||| || |||||||| |||||||||||||||| |||||||||||| |||| |||||    
T  25643532 taaacggaatgttacacatcttaaaatcagtaaatgagataattaactaattatccttcgacatgaatca 25643601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 28291763 - 28291698
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||| ||| ||||||||| |||||    
T  28291763 gtaaacggaatgctacacttcataaaatcgtaaataagttaattaactaatttatccttcgacata 28291698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 8230480 - 8230428
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  8230480 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 8230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 9101479 - 9101419
Alignment:
Q  36 cggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||| |||||||| ||||||||||| |||  | ||||||||||||||||    
T  9101479 cggaatgctacacttcttaaaatcaaaaatgagataaataacaatttatccttcaacataa 9101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 19954439 - 19954376
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||| || |||||||||||||||||||| |||  ||||||| ||||||||||    
T  19954439 taaacggaatgctacacgtcttaaaatcataaatgagataaataa-caattatctttcaacataa 19954376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 13018700 - 13018767
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataaat 98  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  13018700 taaacagaatgctacacttcttaaaaatcataaatgagataaataacaatttatccttcaacataaat 13018767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 22781091 - 22781041
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22781091 acacttcttaaaatcataaatgagataattaacaaattatctttcaacata 22781041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 20593060 - 20593116
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaatc 99  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||  ||||||||||||    
T  20593060 acacttcttaaaatcataaaagagataattaactaattatcctcgtcaacataaatc 20593116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 16493582 - 16493634
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||    
T  16493582 aacggaatgatacacttcttaaaaatcataaatgagataattaactaattatc 16493634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 19667585 - 19667649
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||| || ||||| ||||||||||||||| |||| |||  | ||||||||||||||||    
T  19667585 taaacggaatgttatacttcttaaaatcataaatgaaataaataacaatttatccttcaacataa 19667649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 19651543 - 19651598
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  19651543 ttggcacgcaggcctcatcaaaatatctcataaattcagtcaaacaacttaatcat 19651598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 20108344 - 20108407
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||| ||| ||||| |||||||| ||||| |||  | |||||||||||||||    
T  20108344 taaacggaatgctacatttcttaaaaacataaatgggataaataacaatttatccttcaacata 20108407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 27574212 - 27574149
Alignment:
Q  29 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||||| | ||||||||||| |  |||||||| ||||||||| ||||    
T  27574212 acgtaaacggaatgctacacttcttaaaaatcataaacggaataattaactaattatccatcaa 27574149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4644727 - 4644673
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||| ||||||||    
T  4644727 taaacggaatgctacacttcttaaaaatcttaaatgatataattaactaattatc 4644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 18404060 - 18404003
Alignment:
Q  38 gaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||| ||||||||||||  ||||||||||  ||||||| ||||||||||    
T  18404060 gaatgctacacttc-taaaatcataaaacagataattaacaaattatctttcaacataa 18404003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 20075942 - 20075984
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatcct 87  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||    
T  20075942 acacttcttaaaatcataaaagagataattaactaattatcct 20075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 20639144 - 20639094
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| |||||||||| |||||||||||||  ||||||| |||||||||    
T  20639144 acacttcttaaaatcatatatgagataattaacaaattatctttcaacata 20639094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 15688757 - 15688697
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| | ||||| ||||||   |||||||| ||||||||||||||    
T  15688757 taaacggaatgctacacttcttaaaaattataaatagaataattaactaattatccttcaa 15688697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 16015862 - 16015910
Alignment:
Q  38 gaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    ||||| |||||||| ||||| ||||||||||||||||||| ||||||||    
T  16015862 gaatgttacacttcttaaaaatcataaatgagataattaactaattatc 16015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 17201404 - 17201352
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  17201404 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 17201352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 22081507 - 22081463
Alignment:
Q  142 gcctcatcaaaacatctcat-aaatcagttaaacaacttaatcat 185  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||    
T  22081507 gcctcatcaaaacatctcataaaatcagtcaaacatcttaatcat 22081463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28497243 - 28497183
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||||||||| |||  |||||||||||||||| ||||    
T  28497243 aagtcttggcacgcaggcctcatcaaaacatctcttaagttcagttaaacaacttattcat 28497183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 29809654 - 29809594
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||||||||| |||  |||||||||||||||| ||||    
T  29809654 aagtcttggcacgcaggcctcatcaaaacatctcttaagttcagttaaacaacttattcat 29809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 35137624 - 35137688
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||| || |||||||||||||| |||| ||  |||||| ||| |||||||||||||||    
T  35137624 taaacggaatgttaaacttcataaaatcaaaaataagtcaattaactaatttatccttcaacata 35137688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 14928657 - 14928449
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt-------- 123  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||||||| | |||            
T  14928657 taaatggaatgcaacacttcataaaatcataaataagataattaactaattatccttcaacataa-tcaattccaaaacattgcagcggatttaaagttc 14928559  T
Q  124 ----------ataagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaag 213  Q
              |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  14928558 atcatcataaataagtcttggcacgcaggcctcatcaaaacatctcataaatcagttaaacaacttaatcattt-aaattcataaaacaaatatgtaaag 14928460  T
Q  214 gaataagaaat 224  Q
    |||||||||||    
T  14928459 gaataagaaat 14928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 224
Target Start/End: Complemental strand, 15993886 - 15993681
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt--------- 123  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||             
T  15993886 aaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaacataaatcaattccaaaacattgcagcggattaaattcatc 15993787  T
Q  124 -------ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaagga 215  Q
           |||||| |||| ||| | |||||||||||||| |||||||| |||||||||||||||| ||||   ||| ||||||||||||||||||||| |    
T  15993786 aacataaataagtcttggcacgtaggcctcatcaaaacacctcataaattcagttaaacaacttattcat---aaaatcataaaacaaatacgtaaagaa 15993690  T
Q  216 ataagaaat 224  Q
    |||||||||    
T  15993689 ataagaaat 15993681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 39707190 - 39707105
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||| ||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  39707190 taaacagaatgctacacttctaaaaatcataaatgggataattaactaattatccttcaacataaatcaattccaaaacattgcag 39707105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 46641794 - 46641879
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  46641794 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaacataattcaattccaaaactttgcag 46641879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 15090684 - 15090766
Alignment:
Q  142 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||||||| || |||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||    
T  15090684 gcctcatccaaccatctcataaatcagttaaacaactttatcatttaatattcataaaacaaatacgtaaaggaataagaaat 15090766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 16375710 - 16375625
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||| | |||||||    
T  16375710 taaacggaatgttacacttcataagatcataaataagataattaactaattatccttcaacataattcaattccaaaatattgcag 16375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 15189059 - 15189141
Alignment:
Q  35 acggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||  |||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  15189059 acggaatgtcacacttctaaaaatcataaatgagataattaactaattatccttcaacataattcaattccaaaacattgcag 15189141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 56117042 - 56116957
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||| |||||||||    
T  56117042 taaacggaatgctac-cttcataaaatcataaataagataattaactaattatccttcaatataaatcaaattccaaaacattgcag 56116957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 12773319 - 12773385
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||||    
T  12773319 aacggaatgctacacttcataaaatcataaacgagataatgaactaattatccttcgacataaatca 12773385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 12773429 - 12773520
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||||| |||||||||||| ||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||    
T  12773429 ttggcacgcaggcctcatcaaa-catctcataaattcagttaaacaactta-tcattt-aaattcataaagcaaatacgtaaaggaataagaaat 12773520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 43199455 - 43199398
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  43199455 taaatggaatgctacacttcttaaaatcataaatgagataattaactaattatccttc 43199398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 14763 - 14700
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||    
T  14763 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacata 14700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 15532429 - 15532494
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| || ||||||||||||    
T  15532429 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttctccttcaacata 15532494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 8842236 - 8842304
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| ||||| || |||| |||||||||    
T  8842236 taaacggaatgctacacttctaaaagtcataaatgagataattaactaattttctttcatcataaatca 8842304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 14658 - 14570
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    |||||| |||| ||| | |||||||||||||||||||||||  |||||||||||||||||||| || ||  ||||||| |||||||||||    
T  14658 ataagtcttggcacgtaggcctcatcaaaacatctcataaagttcagttaaacaacttaatcaatt-aacatcataaatcaaatacgtaa 14570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 44674956 - 44675014
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||| | || ||||||||||||||||||||||||||||||    
T  44674956 agttttggcacgcaggcctcatctagacgtctcataaatcagttaaacaacttaatcat 44675014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 16375602 - 16375545
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaactta 180  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16375602 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaactta 16375545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 39707082 - 39706991
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataa-atcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||||||||||||||  ||||||||||||| |||||||   ||| |||| || ||||||||||||||||||    
T  39707082 ataagtcttggcacgcaggcctcatcaaaacatctcataatttcagttaaacaacataatcat---aaaatcat-aatcaaatacgtaaaggaata 39706991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 13843469 - 13843533
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||   | |||||||||||||||    
T  13843469 taaacggaatgctacacttcataaaaatcataaatgagataaatagcaatttatccttcaacata 13843533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 15090574 - 15090627
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacataaatc 99  Q
    ||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  15090574 acacttcttaaaa-cataaaagagataattaactaattatccttcaacataaatc 15090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16349524 - 16349462
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  16349524 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 16349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 17995211 - 17995153
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  17995211 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 17995153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 52874062 - 52874016
Alignment:
Q  54 aaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  52874062 aaaatcataaaacagataattaactaattatccttcaacataaatca 52874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 52244097 - 52244040
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||| |||||| ||||| |||||||| ||||| ||| ||||||||||||    
T  52244097 taaacggaatgctgcacttcttaaaaacataaatgtgataaataactaattatccttc 52244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 3826017 - 3826069
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  3826017 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 3826069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 10697244 - 10697184
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| | |||||||  |||||||| ||||||||||||||    
T  10697244 taaacggaatgctacacttcttaaaaattataaatggaataattaactaattatccttcaa 10697184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 10911013 - 10910953
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| | |||||||  |||||||| ||||||||||||||    
T  10911013 taaacggaatgctacacttcttaaaaattataaatggaataattaactaattatccttcaa 10910953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 12289100 - 12289036
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||  || ||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  12289100 taaacggaatattatacttcttaaaatcataaatgagataaataaaaatttatccttcaacataa 12289036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14163767 - 14163822
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 88  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||| |||||||||||    
T  14163767 taaacggaatgctacactacttaaa-tcacaaatgagataattaactaattatcctt 14163822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 15898654 - 15898602
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  15898654 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 15898602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 44052191 - 44052251
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  44052191 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 44052251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 22631795 - 22631842
Alignment:
Q  48 cttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22631795 cttcttaaaatcataaatgagataattaacaaattatctttcaacata 22631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 22632713 - 22632760
Alignment:
Q  48 cttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  22632713 cttcttaaaatcataaatgagataattaacaaattatctttcaacata 22632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 56116934 - 56116875
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaat 182  Q
    |||||| |||| ||| | ||||||||||||| ||||||||| ||||||||||||||||||    
T  56116934 ataagtcttggcacgtaggcctcatcaaaacgtctcataaattcagttaaacaacttaat 56116875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16357812 - 16357750
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||| |||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  16357812 aacggaatgcaacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 16357750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 13593580 - 13593520
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||  ||||||| ||||| ||||||| || |||||||| ||||||||||||||    
T  13593580 taaacggaatgtcacacttcttaaaaatcataaacgaaataattaactaattatccttcaa 13593520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14157062 - 14157117
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatcctt 88  Q
    |||||| ||||||||||| | |||| ||| ||||||||||||||| |||||||||||    
T  14157062 taaacgaaatgctacactacttaaa-tcacaaatgagataattaactaattatcctt 14157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 14279577 - 14279629
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  14279577 aacggaatgctacacttccaaaatataataaatgagataattaactaattatc 14279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 19608510 - 19608570
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| | |||||||||||||  |||  ||| ||||||||||||||    
T  19608510 taaacggaatgctacacttcttaaaaatcataaatggaatatataactaattatccttcaa 19608570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 20149091 - 20149143
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    ||||||||| |||||||| ||||| | ||||||||||||||||| ||||||||    
T  20149091 aacggaatgttacacttcttaaaaataataaatgagataattaaataattatc 20149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 52244004 - 52243916
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat---cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    |||||| |||| ||||| ||||||||||| ||||||||||||   ||||||||||||||||| | || ||  ||||||| |||||||||||    
T  52244004 ataagtcttggcacgcaggcctcatcaaa-catctcataaatattcagttaaacaacttaattaatt-aacatcataaatcaaatacgtaa 52243916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 22922773 - 22922567
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaaga-cattgcag-ggaatta----- 124  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | |||||||| ||| |||         
T  22922773 taaacggaatgctacacttc-taaaatcataaatgagataattaactaattatcctccaacataaatcaattccaaaaacattgcagcggatttagttca 22922675  T
Q  125 ----------taagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaagg 214  Q
              ||||| |||| ||||| || |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22922674 tcaacataattaagtcttggcacgcaggcttcatcaaaacatctcagaaatcagttaaacaacttaatcattt-aaactcat-aaacaaatacgtaaagg 22922577  T
Q  215 aataagaaat 224  Q
    ||||||||||    
T  22922576 aataagaaat 22922567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 46431547 - 46431447
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaa 223  Q
    ||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46431547 ataagttttggcacgcagacctcatcaaaacatctcataaatcagctaaacaacttaatcatttcaaactcataaaacaaatacgtaaaagaataagaaa 46431448  T
Q  224 t 224  Q
    |    
T  46431447 t 46431447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 46432749 - 46432664
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  46432749 taaacggaatgctacacttcataaaatcattaatgagataattaactaattatccttcaacataaatcaattccaaaacattgcag 46432664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 52928761 - 52928661
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaa 222  Q
    |||||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  52928761 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaaacaaatacgtaaaggaataagaa 52928663  T
Q  223 at 224  Q
    ||    
T  52928662 at 52928661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 33680329 - 33680429
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaa 222  Q
    |||||| |||| ||| | |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  33680329 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaaacaaatacgtaaagaaataagaa 33680427  T
Q  223 at 224  Q
    ||    
T  33680428 at 33680429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 35983108 - 35983024
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  35983108 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaacataattcaattccaa-acattgcag 35983024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 13513218 - 13513303
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  13513218 taaacggaatgctac-cttcataaaatcataaataagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 13513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22236853 - 22236921
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  22236853 taaacagaatgctacacttcataaaatcataaacgagataattaactaattatccttcgacataaatca 22236921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 20247526 - 20247611
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||| |||||||| |||| ||||    
T  20247526 taaacggaatgctacacttca-aaaattataaataagataattaactaattatccttcaacataaatcaaattccaaaacatagcag 20247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 22236965 - 22237057
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||||||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  22236965 ttggtacgtaggcctcatcgaaatatctcataaattcagttaaacaactta-tcattt-aaattcataaaacaaatacgtaaaggaataagaaat 22237057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 52928880 - 52928815
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  52928880 taaacggaatgctacatttctaaaaatcataaatgagataattaactaattatccttcaacataaa 52928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 33680223 - 33680291
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  33680223 taaacggaatgctacacttctaaaagtcataaacgagataattaactaattatccttcaacataaatca 33680291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 21753280 - 21753344
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||    
T  21753280 taaacggaatgctacacttca-aaaatcataaataagataattaactaattatccttcaacgtaaa 21753344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 19208425 - 19208489
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||| ||||||||||||||| |||||||||||| ||||||| |||| | ||||||||||||||||    
T  19208425 taaatggaatgctacacttcttaaaatcataaaagagataaataataatttatccttcaacataa 19208489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 43689755 - 43689819
Alignment:
Q  32 taaacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||  | |||||||||||||||    
T  43689755 taaacggaatgctacacttcataaagatcataaatgagataaataacaatttatccttcaacata 43689819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 51325680 - 51325744
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| | |||||||||||||||||| |||  | ||||||||||||||||    
T  51325680 taaacggaatgctacacttcttgaaatcataaatgagataaataacaatttatccttcaacataa 51325744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 21897166 - 21897103
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||  |||||||||||||||||||| |||  | |||||||||||||||    
T  21897166 taaacggaatgctacactttttaaaatcataaatgagataaataacaatttatccttcaacata 21897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21709330 - 21709388
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||    
T  21709330 agttttggcacgcaggcctcatcaagacgtctcataaatcagttaaacaactgaatcat 21709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21713873 - 21713931
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||    
T  21713873 agttttggcacgcaggcctcatcaagacgtctcataaatcagttaaacaactgaatcat 21713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 21897061 - 21897000
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatca 184  Q
    |||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  21897061 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaatca 21897000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 22356742 - 22356806
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||  | ||||||||| ||||||    
T  22356742 taaacgaaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcgacataa 22356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 22358428 - 22358492
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||  | ||||||||| ||||||    
T  22358428 taaacgaaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcgacataa 22358492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 20440021 - 20439970
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaatt 82  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| |||||    
T  20440021 gtaaacggaatgctacacttcataaaatcattaataagttaattaactaatt 20439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 8881652 - 8881710
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||||  |||| |||||||||| |||||||| ||||||||||||    
T  8881652 taaacggaatgctacacttctcaaaaatcataaatgaaataattaactaattatccttc 8881710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 16369207 - 16369142
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| | ||||||||||||| |||  | ||||||||||||||||    
T  16369207 taaacggaatgctacacttcttaaaaattataaatgagataaataacaatttatccttcaacataa 16369142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 13213764 - 13213712
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  13213764 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 13213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 21704295 - 21704347
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  21704295 aacgaaatgctacacttcttaaaaatcataaatgagataattaactaattatc 21704347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 35261929 - 35261865
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||| ||||||||||||||| ||||||||||||| |||||| |||  | |||||||| |||||||    
T  35261929 taaatggaatgctacacttcttaaaatcataaattagataaataacaatttatcctttaacataa 35261865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 40388416 - 40388468
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  40388416 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 40388468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 12270503 - 12270554
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  12270503 aacggaatgctacacttcttaaaatcataaatagaataattaactaattatc 12270554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 46199629 - 46199562
Alignment:
Q  29 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||||| |     |||||||||||||  |||||||| ||||||||||||||    
T  46199629 acgtaaacggaatgctacacttcttttcctaaaatcataaatggaataattaactaattatccttcaa 46199562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 22450103 - 22450041
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  ||| |||||||  ||||||||||  ||||||| ||||||||||    
T  22450103 aacggaatgctacacttctaaaagtcataaaacagataattaacaaattatctttcaacataa 22450041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 16757858 - 16757891
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaat 65  Q
    |||||||||||||||||||| |||||||||||||    
T  16757858 taaacggaatgctacacttcttaaaatcataaat 16757891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 26064164 - 26064229
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||| ||||||||||| ||||| ||||||||||||||| |||  | |||||| |||||||||    
T  26064164 taaacggagtgctacacttcttaaaaatcataaatgagataaataacaatttatccctcaacataa 26064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 12204462 - 12204494
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  12204462 taaacggaatgctacacttcttaaaatcataaa 12204494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 20848000 - 20847948
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  20848000 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 20847948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 20915516 - 20915568
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  20915516 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 20915568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21753390 - 21753450
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 185  Q
    ||||||||| ||||| ||||| ||||||||| |||| ||| |||| |||||||||||||||    
T  21753390 aagttttggcacgcaggcctcgtcaaaacatgtcatgaattcagtcaaacaacttaatcat 21753450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22359479 - 22359419
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||| ||||    
T  22359479 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttattcat 22359419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 25264163 - 25264111
Alignment:
Q  40 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  25264163 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 25264111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 4e-34; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 14233685 - 14233770
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  14233685 taaacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacataaatcaattccaaaacattgcag 14233770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 15467108 - 15467193
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  15467108 taaacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacgtaaatcaattccaaaacattgcag 15467193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 1466817 - 1466734
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgc 115  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||    
T  1466817 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatacttcaacataattcaattccaaaacattgc 1466734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 16096699 - 16096798
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaa 222  Q
    |||||| |||| ||||| |||| ||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  16096699 ataagtcttggcacgcaggccttatcaaaacatctcataaattcagttaaacaactta-tcattt-aaattcataaaacaaatacgtaaaggaataagaa 16096796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 25477150 - 25477065
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 216  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||||||    
T  25477150 ttggcacgcaggcctcatccaaacatctcataaatcagttaaacaactttatcatttaatattcataaaacaaatacgtaaaggaa 25477065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 49971173 - 49971109
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaat 98  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  49971173 aacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacataaat 49971109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 49391026 - 49390943
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgca 116  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||| | ||| ||||||||    
T  49391026 taaacggaatgctacacttc-taaaatcacaaatgagataattaactaattatccttcaacataattcaacttcaaaacattgca 49390943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 12268408 - 12268491
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc-aacataaatcaattccaagacattg 114  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| || ||||||    
T  12268408 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaaacataattcaattcaaaaacattg 12268491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 15060942 - 15061013
Alignment:
Q  48 cttcataaaatcataaatgagataattaattaattatccttcaacataaatc--aattccaagacattgcag 117  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  15060942 cttcataaaatcataaataagataattaactaattatccttcaacataaatcaaaattccaaaacattgcag 15061013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 16096593 - 16096661
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  16096593 taaacggaatgctacacttctaaaagtcataaatgagataattaactaattatcattcaacataaatca 16096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 1645560 - 1645494
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||  ||| ||||||||||||||||| | |||||||||||||||||||||||    
T  1645560 aacggaatgctacacttctaaaagtcataaatgagataattgactaattatccttcaacataaatca 1645494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 9512172 - 9512257
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  9512172 taaacggaatgctacacttc-taaaatcgtaaacaagataattaactaattatccttcaacataattcaaattccaaaacattgcag 9512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 9520147 - 9520232
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  9520147 taaacggaatgctacacttc-taaaatcgtaaacaagataattaactaattatccttcaacataattcaaattccaaaacattgcag 9520232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 12936513 - 12936428
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  12936513 taaacggaatgctacacttc-taaaatcgtaaacaagataattaactaattatccttcaacataattcaaattccaaaacattgcag 12936428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 12303786 - 12303851
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  12303786 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 12303851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 14765664 - 14765599
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  14765664 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 14765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 36979724 - 36979659
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  36979724 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 36979659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 37005163 - 37005098
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  37005163 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 37005098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 51298744 - 51298809
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  51298744 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 51298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 32306908 - 32306976
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||| |||| ||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  32306908 taaacgaaatgttacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 32306976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 16103034 - 16103116
Alignment:
Q  36 cggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||  |||||||||||| |||||||||| |||||||| ||| |||| |||| |||||||| |||||||||    
T  16103034 cggaatgctacacttctaaaaatcataaataagataattaactaattatctttccacatgaatcaaattccaaaacattgcag 16103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 49668945 - 49668860
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| |||||| ||||  |||||||||| ||||||||||||||| ||| || |||||||| |||||||||    
T  49668945 taaacggaatgctacacttca-aaaatcgtaaacaagataattaactaattatccttcaacgtaattcaaattccaaaacattgcag 49668860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 9531468 - 9531533
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||| ||| |||||||||||||||    
T  9531468 gtaaacggaatgctacacttcataatatcataaataagttaattaactaatttatccttcaacata 9531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 18440811 - 18440747
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  18440811 taaacggaatgctacacttcataaaaatcataaatgagataaataacaatttatccttcaacata 18440747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 19485885 - 19485821
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  19485885 taaacggaatgctacacttcataaaaatcataaatgagataaataacaatttatccttcaacata 19485821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 52524640 - 52524577
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||  | |||||||||||||||    
T  52524640 taaacggaatgctacacttcttaaaaacataaatgagataaataacaatttatccttcaacata 52524577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 12175141 - 12175056
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaat---tatccttcaacataaatc-aattccaagacattg 114  Q
    ||||| |||||||| |||||| |||||||||||| |||||||||| ||||   |||||||||||||||||| |||||||| ||||||    
T  12175141 taaacagaatgctagacttca-aaaatcataaataagataattaactaataattatccttcaacataaatcaaattccaaaacattg 12175056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 17498607 - 17498663
Alignment:
Q  45 acacttcataaaa-tcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||| |||||||  |||||||||| |||||||||||||||||||||||    
T  17498607 acacttcataaaaatcataaaacagataattaactaattatccttcaacataaatca 17498663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 22148758 - 22148706
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  22148758 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 22148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 15467218 - 15467309
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataa---atcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||| |||| ||||| ||||||||||||||||||||||    |||||||||||||||||||||   ||| |||| || ||||||||||||||||||    
T  15467218 aagtcttggcacgcaggcctcatcaaaacatctcataattgttcagttaaacaacttaatcat---aaaatcat-aatcaaatacgtaaaggaata 15467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 14447395 - 14447457
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  14447395 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 14447457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 17487135 - 17487181
Alignment:
Q  54 aaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  17487135 aaaatcataaaacagataattaactaattatccttcaacataaatca 17487181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 51157698 - 51157764
Alignment:
Q  30 cgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||||| |     |||||||||||||| |||||||| ||||||||||||||    
T  51157698 cgtaaacggaatgctacacttctttttctaaaatcataaatgaaataattaactaattatccttcaa 51157764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 607237 - 607172
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| |||||||| |||||| |||  | ||||||||||||||||    
T  607237 taaacggaatgctacacttcttaaaattcataaataagataaataacaatttatccttcaacataa 607172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 17661661 - 17661593
Alignment:
Q  143 cctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    |||||||||| |||||||||||| ||||||||||||||||||| || ||  ||||||| |||||||||||    
T  17661661 cctcatcaaatcatctcataaattcagttaaacaacttaatcaatt-aacatcataaatcaaatacgtaa 17661593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 17661789 - 17661732
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||| ||| |||||||||||||   |||||||| ||||||||||||    
T  17661789 taaacggaatgctacatttcttaaaatcataaatagaataattaactaattatccttc 17661732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 8898273 - 8898325
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||||||||    
T  8898273 aacggaatgctacacttcttaaaaatcgtaaatgagataattaactaattatc 8898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 12398561 - 12398621
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  12398561 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 12398621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 37643469 - 37643417
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  37643469 aacggaatgctacacttcttaaaaatcatagatgagataattaactaattatc 37643417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 49668835 - 49668775
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  49668835 aagtcttggcacgcaagcctcatcaaaatatctcataaattcagttaaacaacttattcat 49668775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 12936398 - 12936343
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  12936398 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 12936343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 15448908 - 15448849
Alignment:
Q  33 aaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||||||    
T  15448908 aaacggaatgctacacttcataaaaatcataaagggaataattaactaattttccttcaa 15448849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 37252021 - 37251954
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataaat 98  Q
    |||||| ||||||||||||| ||||| |||||| |||||||| |||  | ||||||||||||||||||    
T  37252021 taaacgaaatgctacacttcttaaaaatcataattgagataaataacaatttatccttcaacataaat 37251954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 49390913 - 49390858
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  49390913 ttggcacgcaggcctcatcaaaatatcttataaattcagttaaacaacttaatcat 49390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 23273931 - 23273985
Alignment:
Q  32 taaacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  23273931 taaacggaatgctacacttctaaaatataataaatgagataattaactaattatc 23273985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 55319344 - 55319306
Alignment:
Q  53 taaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  55319344 taaaatcataaatggaataattaattaattatccttcaa 55319306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 15061054 - 15061095
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaat 182  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  15061054 gcctcatcaaaacgtctcataaattcagttaaacaacttaat 15061095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 17736460 - 17736509
Alignment:
Q  37 ggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||||||    
T  17736460 ggaatgttacacttcttaaaaatcataaatgagataattaactaattatc 17736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 19037729 - 19037778
Alignment:
Q  37 ggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||||||    
T  19037729 ggaatgttacacttcttaaaaatcataaatgagataattaactaattatc 19037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 22791033 - 22791070
Alignment:
Q  36 cggaatgctacacttcat-aaaatcataaatgagataa 72  Q
    |||||||||||||||||| |||||||||||||||||||    
T  22791033 cggaatgctacacttcataaaaatcataaatgagataa 22791070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 13211099 - 13211039
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| |||||  ||||||||||| |||||||||| |||||||||||||||| ||||    
T  13211099 aagtcttggcacgcagacctcatcaaaatatctcataaaatcagttaaacaacttattcat 13211039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 16103157 - 16103201
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  16103157 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 16103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 22650790 - 22650858
Alignment:
Q  29 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaa-ttaattatccttcaa 91  Q
    ||||||||||||||||||||||| |     |||||||||||||| |||||||| | |||||||||||||    
T  22650790 acgtaaacggaatgctacacttcttttcctaaaatcataaatgaaataattaactaaattatccttcaa 22650858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 24154090 - 24154058
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  24154090 taaacggaatgctacacttcttaaaatcataaa 24154058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 26682703 - 26682759
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcat-aaatcagtt-aaacaacttaatcat 185  Q
    |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  26682703 ttggcacgcaggcctcatcaaaacacctcataaaatcagttcaaacaacttaatcat 26682759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 27901599 - 27901647
Alignment:
Q  38 gaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  27901599 gaatgctacacttcttaaaaataataaatgagataattaactaattatc 27901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 30176348 - 30176316
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  30176348 taaacggaatgctacacttcttaaaatcataaa 30176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 31225870 - 31225810
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| | ||||||||||| |  |||||||| ||||||||| ||||    
T  31225870 taaacggaatgctacacttcttaaaaatcataaacggaataattaactaattatccatcaa 31225810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 5819 - 6029
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt-------- 123  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||            
T  5819 taaacggaatgttacacttcataaaatcataaataagataattaactaattatccttcaacataaatcaattccaaaacattgcagataattaaattcat 5918  T
Q  124 --------ataagttttggtacgcatgcctcatcaaaacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaa 212  Q
            |||||| |||| ||||| ||||||| |||| |||| |||   | ||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  5919 caacataaataagtcttggcacgcaggcctcataaaaaaatcttataattattcagttaaacaacttaatcattt-aaattcataaaataaatacgtaaa 6017  T
Q  213 ggaataagaaat 224  Q
    | ||||||||||    
T  6018 gtaataagaaat 6029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 18004868 - 18005038
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt-------- 123  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||            
T  18004868 taaacgaaatgctacacttc-taaaatcataaatgagataattaactaattatccttcaacataaatcaattccaaaacattgcagcggattaagttcat 18004966  T
Q  124 ---------ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
             |||||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  18004967 caacataaaataagtcttggcacgcatgccttatcaaaacatctcataaattcagttaaacaacttaatcat 18005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 811934 - 811832
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataag 220  Q
    |||||| ||||||||||||||||||||||||||||||||   | |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  811934 ataagtcttggtacgcatgcctcatcaaaacatctcataattattcagttaaactacttaatcattt-aaattcataaaacaaatacgtaaaggaataag 811836  T
Q  221 aaat 224  Q
    ||||    
T  811835 aaat 811832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 14982682 - 14982598
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  14982682 aacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 14982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 15412293 - 15412209
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  15412293 aacggaatgctacacttcataaaatcataaataagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 15412209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 9391118 - 9391033
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||    
T  9391118 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcagcataattcaattccaaaacattgcag 9391033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 47831007 - 47831092
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||||||||||||||||||  |||||||| || ||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  47831007 taaacggaatgctacacttctaaaaatcatgaacgagataattaactaattatccttcaacataaatcaattcctaaacattgcag 47831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 44013409 - 44013477
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  44013409 taaacggaatgctacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 44013477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 16220631 - 16220568
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  16220631 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaacata 16220568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 23667206 - 23667139
Alignment:
Q  29 acgtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  23667206 acgtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 23667139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 11301629 - 11301694
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  11301629 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 11301694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 15165463 - 15165528
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  15165463 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 15165528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 22072208 - 22072261
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22072208 taaacggaatgctacacttcttaaaatcataaatgagataattaactaattatc 22072261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 66976 - 67044
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||    
T  66976 taaacggaatgacacacttcataaaatcataaacgagataattaactaattatccttcgacacaaatca 67044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 12900529 - 12900593
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  12900529 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacataa 12900593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 14158099 - 14158035
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  14158099 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacataa 14158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 37726178 - 37726115
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||    
T  37726178 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacata 37726115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 2283038 - 2282969
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  2283038 gcctcatcaaaacatctcataaattcagttaaacaacttaatcattt-aaattcataaatcaaatatgtaa 2282969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 812041 - 811957
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    ||||| ||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||   |||||||| ||||| |||    
T  812041 taaacagaatgttacacttc-taaaatcataaataagataattaactaattatccttcaacataatcgaattccaaaacattacag 811957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 10898765 - 10898704
Alignment:
Q  35 acggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  10898765 acggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 10898704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 14564440 - 14564505
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||| ||| |||||||||||||||    
T  14564440 gtaaacggaatgctacacttcataacatcataaataagttaattaactaatttatccttcaacata 14564505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 16055534 - 16055591
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  16055534 taaaccgaatgctacacttcttaaaaccataaatgagataattaactaattatccttc 16055591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 6320755 - 6320689
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa--ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||| | || ||||||| |||  |||||||||||||||    
T  6320755 gtaaacggaatgctacacttcataaaatcataattaagttaattaactaattttatccttcaacata 6320689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 15164389 - 15164334
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaa 181  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  15164389 aagtcttggcacgcaggcctcatcaaaacatctcataaattagttaaacaacttaa 15164334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 37729016 - 37728953
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||  |||||||||||||||||||| |||  | |||||||||||||||    
T  37729016 taaacggaatgctacacttattaaaatcataaatgagataaataacaatttatccttcaacata 37728953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 29329843 - 29329791
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  29329843 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 29329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 15115402 - 15115457
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  15115402 aacggaatgctacacttcttaaaatcataaatagaataattaactaattatccttc 15115457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 16220526 - 16220433
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat----cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||| ||||||||||||    ||||||||||||||||||||   |||||||| || ||||||||||||||||||    
T  16220526 ataagtcttggcacgcaggcctcatcaaa-catctcataaattattcagttaaacaacttaatcat---aaactcat-aatcaaatacgtaaaggaata 16220433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 29794515 - 29794581
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa--ttatccttcaacata 95  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| |||  |||||||||||||||    
T  29794515 gtaaacggaatgctatacttcataaaatcataattaagttaattaactaattttatccttcaacata 29794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 29798334 - 29798400
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa--ttatccttcaacata 95  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| |||  |||||||||||||||    
T  29798334 gtaaacggaatgctatacttcataaaatcataattaagttaattaactaattttatccttcaacata 29798400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 14194336 - 14194394
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| |  |||||||||||||||||||||| |||||||    
T  14194336 agttttggcacgcaggcctcatcaagaagtctcataaatcagttaaacaacataatcat 14194394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 15144804 - 15144754
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaa 181  Q
    |||| ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  15144804 ttggcacgcaggcctcatcaaaacatcttataaattagttaaacaacttaa 15144754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 18155632 - 18155574
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| |  |||||||||||||||||||||| |||||||    
T  18155632 agttttggcacgcaggcctcatcaagaagtctcataaatcagttaaacaacataatcat 18155574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 18870541 - 18870603
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  18870541 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 18870603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 44115741 - 44115799
Alignment:
Q  34 aacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||| | |||||||||| |||||||||||| |||||||| |||||    
T  44115741 aacggaatgctacacttcttgaaaatcataagtgagataattaactaattatctttcaa 44115799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 2283168 - 2283115
Alignment:
Q  36 cggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  2283168 cggaatgctacacttcttaaaatcataaatagaataattaactaattatccttc 2283115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 15009394 - 15009333
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaac 92  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||  | ||||||||||||    
T  15009394 taaacggaatgctacacttctttaaaatcataaatgagataaataacaatttatccttcaac 15009333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 19158913 - 19158848
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||  ||  ||||||||||| ||||||| |||||| ||||| |||||||    
T  19158913 taaacggaatgctacacttctaaaggtcataaatgaggtaattaaataattaaccttcgacataaa 19158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 20758312 - 20758247
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||  ||  ||||||||||| ||||||| |||||| ||||| |||||||    
T  20758312 taaacggaatgctacacttctaaaggtcataaatgaggtaattaaataattaaccttcgacataaa 20758247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 19487890 - 19487838
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  19487890 aacggaatgctacacttcttaaaaatcatagatgagataattaactaattatc 19487838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 26211238 - 26211290
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  26211238 aacgaaatgctacacttcttaaaaatcataaatgagataattaactaattatc 26211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 15111827 - 15111882
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||| |||||||||||||   |||||||| |||||| |||||    
T  15111827 aacggaatgctacacttcttaaaatcataaatagaataattaactaattaaccttc 15111882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 67088 - 67138
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaactta 180  Q
    |||| ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  67088 ttggcacgcaggccttatcaaaacatctcataaagtcagttaaacaactta 67138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 9643666 - 9643726
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||  ||||||| ||||| ||||||| || |||||||| ||||||||||||||    
T  9643666 taaacggaatgtcacacttcttaaaaatcataaacgaaataattaactaattatccttcaa 9643726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 10065013 - 10064961
Alignment:
Q  34 aacggaatgctacactt-cataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||| || || || ||||||||||||||||| ||||||||    
T  10065013 aacggaatgctacactttcaaaatataataaatgagataattaactaattatc 10064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 11092365 - 11092425
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    ||||| |||||||||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  11092365 taaacagaatgctacacttcttaaaaatcataaatggaataattaaataattttccttcaa 11092425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 12698185 - 12698245
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||| ||||    
T  12698185 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttattcat 12698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 14275105 - 14275165
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  14275105 taaacggaatgttacacttcttaaaaatcataaatggaataattaactaattttccttcaa 14275165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 15087199 - 15087147
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||| ||| ||||| |||||||| |||||||||| ||||||||    
T  15087199 aacggaatgctacatttcttaaaaatcataaataagataattaactaattatc 15087147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 16997557 - 16997617
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||  ||||||| ||||| |||||||||  |||||||||||||| ||||||||    
T  16997557 taaacggaatgtcacacttcttaaaaatcataaatggaataattaattaattttccttcaa 16997617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 18457294 - 18457262
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  18457294 taaacggaatgctacacttcttaaaatcataaa 18457262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 99565 - 99771
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaaga-cattgcag-ggaatta----- 124  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| | |||||||| ||| |||         
T  99565 taaatggaatgctacacttc-taaattcataaatgagataattaactaattatcctccaacataaatcaattccaaaaacattgcagcggatttagttca 99663  T
Q  125 ----------taagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaag 213  Q
              ||||| |||| ||||| ||||||||||||||||||||| || |||||||||||| |||||||   ||| |||||||||||||||||||||    
T  99664 tcaacataattaagtcttggcacgcaggcctcatcaaaacatctcatagattcagttaaacaacataatcat---aaaatcataaaacaaatacgtaaag 99760  T
Q  214 gaataagaaat 224  Q
    |||||||||||    
T  99761 gaataagaaat 99771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 100771 - 100856
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  100771 taaacggaatgctacacttca-aaaatcataaataagataattaactaattatccttcaacgtaaatcaaattccaaaacattgcag 100856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 40885 - 40792
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| |||| ||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||| || |||||||||| |||||||    
T  40885 ttggcacgcaggccttatcaaaacatctcataaatcagttctacaacttaatcatttaaaattcataaaacatattcgtaaaggaacaagaaat 40792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 40997 - 40929
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||   || ||||||||||||||||||| |||||||||||||||||||||||    
T  40997 taaacggaatgctacacttctagaagtcataaatgagataattaactaattatccttcaacataaatca 40929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 11981 - 12190
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatta------- 124  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||   |||||||| |||||||||   || |           
T  11981 taaacggaatgttacacttc-taaaatcataaataagataattaactaattatccttcaacataatcgaattccaaaacattgcagcagataaagttcat 12079  T
Q  125 ---------taagttttggtacgcatgcctcatcaaaacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaa 212  Q
             ||||| |||| ||||| |||||||||||||||||||||   | ||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  12080 catcataaataagtcttggcacgcaggcctcatcaaaacatctcataattattcagttaaacaacttaatcattt-aaattcataaaaaaaatacgtaaa 12178  T
Q  213 ggaataagaaat 224  Q
    ||||||||||||    
T  12179 ggaataagaaat 12190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 1444 - 1538
Alignment:
Q  131 ttggtacgcatgcctcatcaaaac-atctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  1444 ttggcacgcaggcctcatcaaaaatatctcataaatcagttcaacaacttaatcatttaaaattcataaaacatatacgtaaaggaataagaaat 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 5861 - 5955
Alignment:
Q  131 ttggtacgcatgcctcatcaaaac-atctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  5861 ttggcacgcaggcctcatcaaaaatatctcataaatcagttcaacaacttaatcatttaaaattcataaaacatatacgtaaaggaataagaaat 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 1331 - 1400
Alignment:
Q  32 taaacggaatgctacacttcataa--aatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||| |||||||||||||||||||||||    
T  1331 taaacggaatgctacacttc-taactagtcataaatgagataattaactaattatccttcaacataaatca 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 5748 - 5817
Alignment:
Q  32 taaacggaatgctacacttcataa--aatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||| |||||||||||||||||||||||    
T  5748 taaacggaatgctacacttc-taactagtcataaatgagataattaactaattatccttcaacataaatca 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 3425 - 3333
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  3425 ttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaactta-tcattt-aaattcataaaacaaatacgtaaaggaataagaaat 3333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 3537 - 3471
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaat 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  3537 taaacggaatgctacacttcataaaatcataaacgagataattaactaattatctttcgacataaat 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 4718 - 4780
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  4718 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 21742918 - 21742833
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  21742918 taaacggaatgctacaattctaaaaatcataaatgagataattaactaattatccttcaacataattcaatttcaaaacattgcag 21742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 29916479 - 29916395
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| |||||| ||| |||||||||    
T  29916479 aaacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaatataattcaatttcaaaacattgcag 29916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 21564880 - 21564972
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||    
T  21564880 ttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacttac-cattt-aaattcataaaacaaatacgtaaaggaataagaaat 21564972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 22960419 - 22960334
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  22960419 taaacggaatgctacacttca-aaagtcataaataagataattaactaattatccttcaacataaatcaaattccaaaacattgcag 22960334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 19668129 - 19668195
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  19668129 aacggaatgctacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 19668195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 26012927 - 26012870
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  26012927 taaacggaatgctacacttcttaaaatcataaatgagataattaactaattatccttc 26012870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 41862683 - 41862620
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaaca 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  41862683 gtaaacggaatgctacacttcataaaatcataaataagataattaactaatttatccttcaaca 41862620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 21330422 - 21330356
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  21330422 taaacagaatgctacacttcttaaaaatcataaatgagataattaactaattatccttcaacataaa 21330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 21564770 - 21564836
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||    
T  21564770 aacggaatgcaacacttcataaaatcataaacgagataattaactaattatccttcggcataaatca 21564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 9774270 - 9774335
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  9774270 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 9774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 22141999 - 22142056
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  22141999 taaacggaatgctacacttcttaaaaacataaatgagataattaactaattatccttc 22142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21330303 - 21330212
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||   ||| |||| || ||||||||||||||||||    
T  21330303 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat---aaaatcat-aatcaaatacgtaaaggaata 21330212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 37606644 - 37606579
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||| ||| |||||||||||||||    
T  37606644 gtaaacggaatgctacacttcttaaaatcataaataagttaattaactaatttatccttcaacata 37606579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 9077190 - 9077255
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||||| ||||||||||||  ||||||||||  ||||||| ||||||||||||||    
T  9077190 aacggaatgctacacttc-taaaatcataaaacagataattaacaaattatctttcaacataaatca 9077255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 41096524 - 41096467
Alignment:
Q  29 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||    
T  41096524 acgtaaacggaatgctacacttcttaaaaatcttaaatgagataattaactaattatc 41096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 5890590 - 5890526
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 95  Q
    ||||| |||||||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  5890590 taaactgaatgctacacttcataaaaatcataaatgagataaataacaatttatccttcaacata 5890526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 10776598 - 10776546
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  10776598 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 10776546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 14047315 - 14047367
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  14047315 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 14047367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 20298593 - 20298653
Alignment:
Q  32 taaacggaatgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||||||    
T  20298593 taaacggaatgctacatttcataacaatcataaatggaataattaactaattatccttcaa 20298653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 21275641 - 21275693
Alignment:
Q  44 tacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||| ||||||||||||||||||||||||  ||||||| ||||||||||    
T  21275641 tacacttcttaaaatcataaatgagataattaacaaattatctttcaacataa 21275693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 21731146 - 21731094
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  21731146 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 21731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 21809266 - 21809214
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  21809266 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 21809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 261821 - 261888
Alignment:
Q  29 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||||| |     |||||||||||||| |||||||| ||||||||||||||    
T  261821 acgtaaacggaatgctacacttcttttcctaaaatcataaatgaaataattaactaattatccttcaa 261888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 21886525 - 21886576
Alignment:
Q  44 tacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  21886525 tacacttcttaaaatcataaatgagataattaacaaattatctttcaacata 21886576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 19509766 - 19509828
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  19509766 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 19509828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21367526 - 21367464
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  21367526 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 21367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 21876760 - 21876818
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||  |||||||| ||||||||||||||||||||||||  ||||||| |||||    
T  21876760 aaacggaatattacacttcttaaaatcataaatgagataattaacaaattatctttcaa 21876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 26703443 - 26703501
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||| ||||||||||    
T  26703443 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaactacttaatcat 26703501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 26973176 - 26973234
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||| ||||||||||    
T  26973176 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaactacttaatcat 26973234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 38147256 - 38147190
Alignment:
Q  31 gtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||| ||||||||||    
T  38147256 gtaaacggaatgctacacttcataaaaatcacaaaatagataattaacaaattatctttcaacataa 38147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 20032587 - 20032530
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    ||||||||||| |||||||| |||||||||||||   |||||||| ||||||||||||    
T  20032587 taaacggaatgatacacttcttaaaatcataaatagaataattaactaattatccttc 20032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 18319891 - 18319839
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  18319891 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 18319839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 21872491 - 21872538
Alignment:
Q  44 tacacttcataaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||    
T  21872491 tacacttcttaaaatcataaatgagataattaacaaattatctttcaa 21872538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 8287697 - 8287647
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| |||||||||| |||||||||||||  ||||||| |||||||||    
T  8287697 acacttcttaaaatcatatatgagataattaacaaattatctttcaacata 8287647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 24211792 - 24211850
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||||  |||| |||||||||  |||||||| ||||||||||||    
T  24211792 taaacggaatgctacacttctcaaaaatcataaatggaataattaactaattatccttc 24211850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 25430662 - 25430708
Alignment:
Q  54 aaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  | |||||||||||||||||||||| |||||||||    
T  25430662 aaaatcataaaacatataattaattaattatccttcatcataaatca 25430708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 42958871 - 42958905
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaat 65  Q
    ||||||||||||||||||||||||| |||||||||    
T  42958871 gtaaacggaatgctacacttcataatatcataaat 42958905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 21503082 - 21503029
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||| ||||| |||||||| ||||||| |||| ||||||||||| ||||||||    
T  21503082 taaactgaatgttacacttcttaaaatcttaaaagagataattaactaattatc 21503029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 5890468 - 5890391
Alignment:
Q  142 gcctcatcaaaacatctcataaa--tcagtt-aaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    ||||||||||| |||||||||||  |||||| |||||||||||||| || | | ||||||| ||||||||||||||||||    
T  5890468 gcctcatcaaa-catctcataaaattcagtttaaacaacttaatcaattgaca-tcataaatcaaatacgtaaaggaata 5890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 18417346 - 18417398
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  18417346 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 18417398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 22142115 - 22142203
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaat---cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    |||||| |||| ||| | ||||||||||| ||||||||||||   ||||||||||||||||||| || ||  ||||||| |||||||||||    
T  22142115 ataagtcttggcacgtaggcctcatcaaa-catctcataaatattcagttaaacaacttaatcaatt-aacatcataaatcaaatacgtaa 22142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 24066413 - 24066465
Alignment:
Q  34 aacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| | ||||| |||||||||||||||||  |||||||    
T  24066413 aacggaatgctacacttcttaaaaataataaatgagataattaacgaattatc 24066465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 36155522 - 36155474
Alignment:
Q  38 gaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||  ||||| ||||||||||||||||||| ||||||||    
T  36155522 gaatgctacactttttaaaaatcataaatgagataattaactaattatc 36155474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 19795329 - 19795538
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaa-ttccaaga-cattgcagggaatta---- 124  Q
    ||||||| ||||||| ||| |  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||| | ||||        
T  19795329 gtaaacgaaatgctatactactaaaaatcataaatgagataattaactaattatccttcaacataaatcaaattccaaaaacattgcagcggattaagtt 19795428  T
Q  125 ------------taagttttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
                ||||| |||  ||||| |||| ||||||||||||||||||| ||||||||||||||| ||||   ||| |||||||||||||||||||    
T  19795429 catcaacataaataagtcttgacacgcaggcctaatcaaaacatctcataaattcagttaaacaacttattcat---aaaatcataaaacaaatacgtaa 19795525  T
Q  212 aggaataagaaat 224  Q
    |||||||||||||    
T  19795526 aggaataagaaat 19795538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 7678931 - 7679025
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  7678931 ataagtcttggcacgcaggcctcatcaaaacatttcataaattcagttaaacaacttaatcattt-aaattcataaatcaaatacgtaaaggaata 7679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 24689204 - 24689010
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcagggaatt-------- 123  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||||| |||||||| ||| |||||||| || |||||| | |||            
T  24689204 taaacggaatgctaaacttcttaaaatcataaatgagataattaacaaattatctttcaacat-aattaattccaaaactttgcagcggattaaattcat 24689106  T
Q  124 --------ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
            |||||| |||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||| || ||| ||||||| |||||||||||    
T  24689105 caacataaataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacgacttaatcaatt-aaaatcataaatcaaatacgtaa 24689010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 23059863 - 23059948
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 216  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| | | |||| ||||||||||| |||||||    
T  23059863 ttggcacgcaggcctcatccaaacatctcataaatcagttaaacaactttatcatttaatattcatgaaacaaatacgcaaaggaa 23059948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 28405225 - 28405292
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  28405225 taaacggaatgctacacttc-taaaatcgtaaacgagataattaactaattatccttcaacataaatca 28405292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 22135073 - 22134988
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  22135073 taaacggaatgctacacttc-taaaatcgtaaacaagataattaactaattatccttcaacataattcaaattccaaaacattgcag 22134988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 10687115 - 10687050
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  10687115 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 10687050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 8635 - 8572
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||    
T  8635 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacata 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 23713803 - 23713748
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatcct 87  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  23713803 taaacggaatgctacacttctaaaaatcataaatgagataattaactaattatcct 23713748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 7678814 - 7678878
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||||||||| || ||| | |||||||| ||||||||||||||||||||    
T  7678814 taaacggaatgctacacttcataaaattat-aatcaaataattaactaattatccttcaacataaa 7678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 20259467 - 20259532
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||||||||||||    
T  20259467 gtaaacggaatgctacactttataaaatcataaataagttaattaactaatttatccttcaacata 20259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 23866836 - 23866901
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||| ||| |||||||||||||||    
T  23866836 gtaaacggaatgctacacttcataatatcataaataagttaattaactaatttatccttcaacata 23866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 22414046 - 22413982
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  22414046 taaatggaatgctacacttcttaaaatcataaatgagataaataaaaatttatccttcaacataa 22413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 19819896 - 19819951
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||| ||||||||||||| || ||||||||||| ||||||||||||    
T  19819896 aacggaatgctacatttcataaaatcattaacgagataattaactaattatccttc 19819951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 8905946 - 8906011
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||  | ||||||||||||||||    
T  8905946 taaacggaatgctacacttctttaaaatcataaatgagataaataacaatttatccttcaacataa 8906011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 20616551 - 20616616
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||| ||||||||| |  ||||||| ||| |||||||||||||||    
T  20616551 gtaaacggaatgctacacttcataatatcataaataaattaattaactaatttatccttcaacata 20616616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 29594139 - 29594196
Alignment:
Q  29 acgtaaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||    
T  29594139 acgtaaacggaatgctacacttcttaaaaatcttaaatgagataattaactaattatc 29594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 43136518 - 43136570
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  43136518 aacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 43136570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 8530 - 8468
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatca 184  Q
    |||||| |||| ||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  8530 ataagtgttggcacgtaggcctcatcaaaacatctcataaaattcagttaaacaacttaatca 8468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6481042 - 6481104
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  6481042 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 6481104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6484509 - 6484571
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  6484509 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 6484571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 20634739 - 20634681
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  20634739 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 20634681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 23066409 - 23066479
Alignment:
Q  146 catcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 216  Q
    |||| |||||||||| |||||||||||||||||| ||||||| | | |||| ||||||||||  |||||||    
T  23066409 catccaaacatctcaaaaatcagttaaacaactttatcatttaatattcatgaaacaaatacacaaaggaa 23066479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 23075859 - 23075929
Alignment:
Q  146 catcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaa 216  Q
    |||| |||||||||| |||||||||||||||||| ||||||| | | |||| ||||||||||  |||||||    
T  23075859 catccaaacatctcaaaaatcagttaaacaactttatcatttaatattcatgaaacaaatacacaaaggaa 23075929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 24316809 - 24316751
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    ||||| |||||||||||||| ||||| |||||||||  |||||||||||||||||||||    
T  24316809 taaacagaatgctacacttcttaaaaatcataaatggaataattaattaattatccttc 24316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 18787645 - 18787580
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| || |||||||||||| |||  | ||||||||||||||||    
T  18787645 taaacggaatgctacacttcttaaaaatcttaaatgagataaataacaatttatccttcaacataa 18787580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 20521049 - 20520984
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||  | |||||| |||||||||    
T  20521049 taaacggaatgctacacttcttaaaaatcataaatgagataaataacaatttatccatcaacataa 20520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 23030715 - 23030756
Alignment:
Q  142 gcctcatcaaaacatctcataaatcagttaaacaacttaatc 183  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  23030715 gcctcatcaagacatctcgtaaatcagttaaacaacttaatc 23030756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 30647750 - 30647689
Alignment:
Q  35 acggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||  ||||||||||||| || ||||||| ||| |||||||||||||||    
T  30647750 acggaatgctacactttttaaaatcataaataagttaattaactaatttatccttcaacata 30647689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 25175182 - 25175272
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| |||||||||||||||| |||||| ||| ||||||||| |||||||   ||| |||| || |||||||||| |||||||||||||    
T  25175182 ttggcacgcaggcctcatcaaaacatcccataaattcaattaaacaacataatcat---aaaatcat-aatcaaatacgtagaggaataagaaat 25175272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 27471567 - 27471627
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| | |||||||||||||  |||||||| ||||| ||||||||    
T  27471567 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattttccttcaa 27471627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 19203231 - 19203172
Alignment:
Q  33 aaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||  ||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  19203231 aaacggaatgtcacacttcataaaaatcataaatggaataattaattaattttccttcaa 19203172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 21918374 - 21918412
Alignment:
Q  53 taaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  21918374 taaaatcataaatgaaataattaactaattatccttcaa 21918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 22732288 - 22732238
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||||||||||||||||||||  ||||||| || ||||||    
T  22732288 acacttcttaaaatcataaatgagataattaacaaattatcttttaacata 22732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 22738998 - 22738948
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||||||||||| ||||||||  ||||||| |||||||||    
T  22738998 acacttcttaaaatcataaatgaaataattaacaaattatctttcaacata 22738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 22800016 - 22799955
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| | |||||||    
T  22800016 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatcttccaacata 22799955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 22134947 - 22134903
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  22134947 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 22134903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 24669901 - 24669953
Alignment:
Q  40 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  24669901 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 24669953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 24680350 - 24680402
Alignment:
Q  40 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||| ||| |||||||||||  |||||||| ||||||||||||||    
T  24680350 atgctacacttcttaagaatcataaatggaataattaactaattatccttcaa 24680402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 24947125 - 24947181
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| |||| |||||||    
T  24947125 aacggaatgctacacttctaaaatataataaatgagataattaactaatcatccttc 24947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 53053 - 52969
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatcaattccaagacattgcag 117  Q
    |||||||||||||||||||  ||||||||||||| |||| |||| ||||||||||||||||||| |||||||||| |||||||||    
T  53053 aaacggaatgctacacttctaaaaatcataaatgggatagttaactaattatccttcaacataattcaattccaaaacattgcag 52969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 31638 - 31691
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| ||||||||    
T  31638 taaacgaaatgctacacttctaaaaatcataaatgagataattaactaattatc 31691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 31732 - 31785
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| ||||||||    
T  31732 taaacgaaatgctacacttctaaaaatcataaatgagataattaactaattatc 31785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 129138 - 129204
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  129138 aacggaatgctacacttctaaaaatcataaatgagataattaactaattatccttcaacataaatca 129204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 118528 - 118463
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| ||| ||||||||||| |||  | ||||||||||||||||    
T  118528 taaacggaatgctacacttcttaaaaatcacaaatgagataaataacaatttatccttcaacataa 118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 15490 - 15398
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||    
T  15490 ttggcacgcaagcctcatcaaaacatctcataaattcagttaaacaactta-tcattt-aaattcataaaacaattacgtaaaggaataagaaat 15398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 15602 - 15534
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  15602 taaacggaatgctacacttcataaaatcataaacgggataattaactaattatccttcgacataaatca 15534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 79272 - 79210
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||| ||||||| ||||  | ||||||||  ||||||| ||||||||||    
T  79272 aacggaatgctacacttcttaaaatcgtaaaacaaataattaacaaattatctttcaacataa 79210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 6049 - 6117
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  6049 taaacggaatgctacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 6117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 11095 - 11163
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  11095 taaacagaatgctacacttcataaaatcataaatgagataattaactaattatccctcaacatgaatca 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 1963 - 1898
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||    
T  1963 taaacggaatgctacacttctaaatatcataaatgagataattaactaattatccttcaacataaa 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 1845 - 1754
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||   ||| |||| || ||||||||||||||||||    
T  1845 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat---aaaatcat-aatcaaatacgtaaaggaata 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 11231 - 11275
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  11231 gcctcatcaaaacatctcataaattcagttaaacaacataatcat 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 18600 - 18690
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaa 222  Q
    |||| ||||| |||||||||||| ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  18600 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaactta-tcattt-aaattcataaaacaaatacgtaaaggaataagaa 18690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 18488 - 18556
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  18488 taaacggaatgctacagttcataaaatcataaacgggataattaactaattatccttcgacataaatca 18556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 24779 - 24711
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  24779 taaacggaatgctacacttctaaaactcataaatgagataattaactaattatccttcaacataaatca 24711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 24673 - 24611
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||||| |||| ||| | |||| |||||||||||||||||| |||||||||||||||||||||    
T  24673 ataagtcttggcacgtaggccttatcaaaacatctcataaattcagttaaacaacttaatcat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 17014 - 17070
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagtt-aaacaacttaatcat 185  Q
    |||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||||    
T  17014 ttggcacgcaggcctcatcaaaacacctcataaattcagttcaaacaacttaatcat 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 4087 - 4008
Alignment:
Q  145 tcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    ||||| || |||||||||||||||||||||| ||| ||||||| | | ||||||||||||||||||||||||||||||||    
T  4087 tcatccaatcatctcataaatcagttaaacatctttatcatttaatattcataaaacaaatacgtaaaggaataagaaat 4008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 4200 - 4147
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacataaatc 99  Q
    ||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  4200 acacttcttaaaa-cataaaagagataattaactaattatccttcaacataaatc 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 4869 - 4932
Alignment:
Q  37 ggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  4869 ggaatgctacacttcataaaatcataaacgagataattaactaattatccttcgacataaatca 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 4976 - 5067
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||||||||||| || |||||||| |||||||||||||||| ||| ||||  |||| ||||||||||||| |||||||    
T  4976 ttggcacgcaggcctcatcaaaacatctgatcaatcagttcaacaacttaatcatttaaaattcat--aacacatacgtaaaggaacaagaaat 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 5574 - 5507
Alignment:
Q  33 aaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5574 aaacggaatgatacacatcttaaaatcataaatgagataattaactaattatccttcaacataaatca 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5462 - 5407
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  5462 ttggcacgcaagcctcatcaaaacatctcataaattcaattaaacaacttaatcat 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 221510 - 221567
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||| ||||| | |||||||||||||   |||||||| ||||||||||||    
T  221510 taaacggaatgcaacactccttaaaatcataaatagaataattaactaattatccttc 221567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 221643 - 221712
Alignment:
Q  142 gcctcatcaaaacatctcataaa--tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    ||||||||||| | |||||||||  ||||||||||||| ||||||||| ||| ||||||| |||||||||||    
T  221643 gcctcatcaaa-cgtctcataaaattcagttaaacaacataatcattt-aaattcataaatcaaatacgtaa 221712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 159917 - 159999
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca-attccaagacattg 114  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  159917 taaacggaatgttacacttca-aaaatcataaataagataattaactaattatccttcaacataaatcacattccaaaacattg 159999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 198159 - 198220
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||||||||||||||  ||||| ||||| |||||||||    
T  198159 aagtcttggcacgcaggcctcatcaaaacatctcataaaattcagtcaaacatcttaatcat 198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 29656 - 29571
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| |||||| |||||||| |||||||||    
T  29656 taaacggaatgctacacttca-aaaatcataaataagataattaactaattatctttcaacgtaaatcaaattccaaaacattgcag 29571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 10917 - 10849
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10917 taaacagaatgctacacttctaaaaatcataaatgagataattaactaattatccttcgacataaatca 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 10799 - 10708
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    |||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||   ||| |||| || ||||||||||||||||||    
T  10799 ataagtcttggcacgcaggcctcatcaaaacatctcataaattcagttaaacaacataatcat---aaaatcat-aatcaaatacgtaaaggaata 10708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 31353 - 31420
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||||||||    
T  31353 taaacggaatgctacacttca-aaaatcgtaaacgagataattaactaattatccttcaacataaatca 31420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 45115 - 45179
Alignment:
Q  36 cggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  45115 cggaatgctacacttctaaaagtcataaatgagataattaactaattatccttcaacataaatca 45179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 10129 - 10214
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| |||| | ||||| || |||||||||    
T  10129 taaacggaatgctacacttca-aaaatcataaataagataattaactaattatccttcaacgtaaaacaaattctaaaacattgcag 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 2926 - 3011
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    |||||||||||| ||||||| ||||||| ||||  |||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  2926 taaacggaatgcaacacttc-taaaatcgtaaacaagataattaattaattatccttcaacataattcaaattccaaaacattgcag 3011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 3041 - 3096
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  3041 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 3096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 40571 - 40651
Alignment:
Q  142 gcctcatcaaaacatctcataaatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    ||||||||||||  |||||||| |||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||    
T  40571 gcctcatcaaaatgtctcataattcagttaaacaactta-tcattt-aaattcataaaacaaatacgcaaaggaataagaaat 40651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 40445 - 40530
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaatc-aattccaagacattgcag 117  Q
    ||||||||||  ||||||||| || || |||||| |||||||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  40445 taaacggaattatacacttca-aagattataaataagataattaactaattatccttcaacgtaaatcaaattccaaaacattgcag 40530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 86982 - 87042
Alignment:
Q  32 taaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| | ||||||||||||   |||||||| ||||||||||||||    
T  86982 taaacggaatgctacacttcttaaaaatcataaattgaataattaactaattatccttcaa 87042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 132062 - 132117
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  132062 ttggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 132117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 801 - 736
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  801 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 4385 - 4320
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  4385 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 4320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 11002 - 10937
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    |||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||||||    
T  11002 taaacggaatgctacactactaaatatcataaatgagataattaactaattatccttcaacataaa 10937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 10867 - 10794
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaata 218  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||   ||| |||| || ||||||||||||||||||    
T  10867 gcctcatcaaaacatctcataaattcagttaaacaacataatcat---aaaatcat-aatcaaatacgtaaaggaata 10794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 1156 - 1213
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  1156 taaacggaatgctacacttctaaaaatcataaatgagataattaattaattattcttc 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 50084 - 50149
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  50084 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 50149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 160803 - 160738
Alignment:
Q  31 gtaaacggaatgctacacttcataaaatcataaatgagataattaattaa-ttatccttcaacata 95  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  160803 gtaaacggaatgctacacttcataaaatcataaataagttaattaactaatttatccttcaacata 160738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 9638 - 9702
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  9638 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacataa 9702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 54461 - 54398
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||    
T  54461 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatccttcaacata 54398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 54356 - 54268
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa--tcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    |||||| |||| ||| | |||||||||||||||||||||||  |||||||||||||||||||| || ||  ||||||| |||||||||||    
T  54356 ataagtcttggcacgtaggcctcatcaaaacatctcataaagttcagttaaacaacttaatcaatt-aacatcataaatcaaatacgtaa 54268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 134 - 77
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  134 taaacggaatgctacacttcttaaaaacataaatgatataattaactaattatccttc 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 2899 - 2842
Alignment:
Q  29 acgtaaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  2899 acgtaaacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 2842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 8984 - 8927
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  8984 taaacggaatgctacacttcttaagatcattaatgagataattaactaattatccttc 8927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 137295 - 137231
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | ||||| ||||||||||    
T  137295 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatctttcaacataa 137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 126028 - 126092
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| |||||||||||||||||||| |||  | ||||| ||||||||||    
T  126028 taaacggaatgctacacttcttaaaatcataaatgagataaataacaatttatctttcaacataa 126092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 76943 - 77007
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||  | ||||| ||||||||||    
T  76943 taaacgaaatgctacacttcttaaaatcataaatgagataaataacaatttatctttcaacataa 77007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 31853 - 31911
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| || ||||||| ||||||||||||||||||||||    
T  31853 agttttggcacgcaggcctcatcaagacgtctcatatatcagttaaacaacttaatcat 31911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 178225 - 178283
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| ||||| |||||||||| |  ||||||||||||||||||||||||||||||    
T  178225 agttttggcacgcaggcctcatcaagatgtctcataaatcagttaaacaacttaatcat 178283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 97646 - 97590
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| |||| |||||||    
T  97646 aacggaatgctacacttctaaaatataataaatgagataattaactaatcatccttc 97590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 21985 - 21932
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  21985 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 21932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 24980 - 24927
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  24980 taaacggaatgctacacttctaaaaatcgtaaatgagataattaactaattatc 24927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 9760 - 9813
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatc 85  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  9760 taaacagaatgctacacttctaaaaatcataaatgagataattaactaattatc 9813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 9877 - 9965
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcata---aatcagttaaacaacttaatcatttcaaactcataaaacaaatacgtaa 211  Q
    ||||||||||| ||||||| |||||| ||||||||||||   | |||||||||||||||||| |  ||||  ||||||| |||||||||||    
T  9877 ataagttttggcacgcatgtctcatc-aaacatctcataactattcagttaaacaacttaatta-atcaatatcataaatcaaatacgtaa 9965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 23255 - 23308
Alignment:
Q  33 aaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  23255 aaacggaatgctacacttcttaaaaatcataaatgagataattaactaattatc 23308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 104544 - 104479
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||  | ||||||||||||||||    
T  104544 taaacggaatgctacacttcttaaaaatcataaatgagataaataacaatttatccttcaacataa 104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 266643 - 266708
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||  | ||||||||||||||||    
T  266643 taaacggaatgctacacttcttaaaaatcataaatgagataaataacaatttatccttcaacataa 266708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 8983 - 8919
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||| ||| ||||||  |||||||||||||| |  ||||||||||||||||||    
T  8983 taaacggaatgctacaattcttaaaattgtaaatgagataattgacaaattatccttcaacataa 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 1127 - 1075
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  1127 aacggaatgctacacttcttaaaagtcataaatgagataattaactaattatc 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 1656 - 1604
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  1656 aacggaatgctacacttcttaaaaatcataaatgagataattaacttattatc 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 158389 - 158449
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||||    
T  158389 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttcaa 158449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 84490 - 84553
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||  | ||||||| |||||||    
T  84490 taaacggaatgctacacttctaaaaatcataaatgagataaataacaatttatcctccaacata 84553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 349 - 408
Alignment:
Q  124 ataagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaat 182  Q
    |||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  349 ataagtcttggcacgtaggcctcatcaaaacatctcataaattcagttaaacaacttaat 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 246 - 309
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||||||||| ||| |||| ||||||||||||||| |||  | |||||||||| |||||    
T  246 taaacggaatgctacatttcttaaa-tcataaatgagataaataacaatttatccttcagcataa 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 7570 - 7633
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    |||||||||||||||||||| | |||||||||||||||||| |||  | ||||| |||||||||    
T  7570 taaacggaatgctacacttcttgaaatcataaatgagataaataacaatttatctttcaacata 7633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 2288 - 2343
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  2288 ttggcacgcatgcctcatcaaaatatctcataaattcagttaaacaacttattcat 2343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 9683 - 9727
Alignment:
Q  142 gcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||    
T  9683 gcctcatcaaaatatctcataaattcagttaaacaacttattcat 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 3771 - 3826
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    ||||||| ||||||| |||||| ||||||||| ||| |||||||||||||||||||    
T  3771 acacttcttaaaatcgtaaatgggataattaactaaatatccttcaacataaatca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 3870 - 3923
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||| ||||| |||||||||||||||||||| ||| |||| ||||||||||||||    
T  3870 ttggcacgcaggcctcatcaaaacatctcattaat-agtttaacaacttaatcat 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 3141 - 3187
Alignment:
Q  54 aaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  3141 aaaatcataaaacagataattaactaattatccttcaacataaatca 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 2801 - 2859
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttc 89  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||| ||||||||||||    
T  2801 taaacggaatgctacacttcttaaaaatcataaatggaataattaactaattatccttc 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 3870 - 3779
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||| || ||||||||||| |||||||||||| || |||||| ||| ||||||| ||||||| ||||||||||||||||    
T  3870 ttggcacgcaggcctcatcataatatctcataaattcagttaaacaacgta-tcattt-aaattcataaa-caaatacataaaggaataagaaat 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 8430 - 8339
Alignment:
Q  131 ttggtacgcatgcctcatcaaaacatctcataaat-cagttaaacaacttaatcatttcaaactcataaaacaaatacgtaaaggaataagaaat 224  Q
    |||| ||||| ||||||||| || ||||||||||| |||||||||||| || |||||| ||| ||||||| ||||||| ||||||||||||||||    
T  8430 ttggcacgcaggcctcatcataatatctcataaattcagttaaacaacgta-tcattt-aaattcataaa-caaatacataaaggaataagaaat 8339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 3984 - 3916
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatga-gataattaattaattatccttcaacataaatca 100  Q
    |||| |||||||||||||||| |||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  3984 taaatggaatgctacacttca-aaaatcttaaaacaagataattaactaattatccttcaacataaatca 3916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 8544 - 8476
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatga-gataattaattaattatccttcaacataaatca 100  Q
    |||| |||||||||||||||| |||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  8544 taaatggaatgctacacttca-aaaatcttaaaacaagataattaactaattatccttcaacataaatca 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 2930 - 2868
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  2930 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 2868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 26848 - 26894
Alignment:
Q  54 aaaatcataaatgagataattaattaattatccttcaacataaatca 100  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  26848 aaaatcataaaacagataattaactaattatccttcaacataaatca 26894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 8767 - 8829
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  8767 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 37757 - 37819
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  37757 aacggaatgctacacttctaaaaatcataaaaaagataattaacaaattatctttcaacataa 37819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 22926 - 22988
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||||||| |||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  22926 aacggaatgcaacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 22988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 57926 - 57988
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  57926 aacggaatgctacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 57988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 27737 - 27787
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  27737 acacttcttaaaatcataaatgagataattaacaaattatctttcaacata 27787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 83 - 42
Alignment:
Q  144 ctcatcaaaacatctcataaatcagttaaacaacttaatcat 185  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  83 ctcatcaagacgtctcataaatcagttaaacaacttaatcat 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 37094 - 37159
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||||  ||  ||||||||||| ||||||| |||||| ||||| |||||||    
T  37094 taaacggaatgctacacttctaaagttcataaatgaggtaattaactaattaaccttcgacataaa 37159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 20710 - 20645
Alignment:
Q  33 aaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataaa 97  Q
    ||||||||||||||||||| ||||| ||||||| ||||||| |||  | |||||||||||||||||    
T  20710 aaacggaatgctacacttcttaaaaatcataaaggagataaataacaatttatccttcaacataaa 20645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 73112 - 73177
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacataa 96  Q
    |||||| ||||||||||||| ||||| ||||||||||||||| |||  | ||||||||||||||||    
T  73112 taaacgaaatgctacacttcttaaaaatcataaatgagataaataacaatttatccttcaacataa 73177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3582 - 3642
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  3582 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagtcaaacaacttaatcat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0820 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0820
Description:

Target: scaffold0820; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 3849 - 3797
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  3849 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 3797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 1940 - 2004
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 95  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| |||  | |||||||||||||||    
T  1940 taaacagaatgctacacttcgtaaaaatcataaatgagataaataacaatttatccttcaacata 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 6839 - 6779
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  6839 aagtattggcacgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 8001 - 7949
Alignment:
Q  40 atgctacacttcataa-aatcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||||    
T  8001 atgctacactttttaagaatcataaatgaaataattaattaattatccttcaa 7949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 4203 - 4263
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||||||||    
T  4203 aagtcttggcacgcaggcctcatcaaaatatctcataaattcagttgaacaacttaatcat 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 5942 - 5994
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  5942 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 3030 - 2978
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  3030 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 161991 - 161939
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||    
T  161991 aacggaatgctacacttcttaaaaataataaatgagataattaactaattatc 161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 165567 - 165517
Alignment:
Q  34 aacggaatgctacacttcataaaa-tcataaatgagataattaattaatta 83  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  165567 aacggaatgctacacttcttaaaaataataaatgagataattaactaatta 165517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 23183 - 23238
Alignment:
Q  127 agttttggtacgcatgcctcatcaaaacatctcataaatcagttaaacaacttaat 182  Q
    |||||||| ||||| |||||||||| |  |||||||||| ||||||||||||||||    
T  23183 agttttggcacgcaggcctcatcaagatgtctcataaattagttaaacaacttaat 23238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 13281 - 13340
Alignment:
Q  33 aaacggaatgctacacttcat-aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||||||    
T  13281 aaacggaatgctacacttcataaaaatcataaagggaataattaactaattttccttcaa 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 71785 - 71718
Alignment:
Q  29 acgtaaacggaatgctacacttcat-----aaaatcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||||||||||| |     |||||||||||||  |||||||| ||||||||||||||    
T  71785 acgtaaacggaatgctacacttcttttcctaaaatcataaatggaataattaactaattatccttcaa 71718  T

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Target: scaffold0412 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 14576 - 14514
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||||||||||||  |||||||| ||  ||||||||||  ||||||| ||||||||||    
T  14576 aacggaatgctacacttctaaaaatcattaaacagataattaacaaattatctttcaacataa 14514  T

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Target: scaffold0292 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 2737 - 2787
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||| ||||||||||||||||  ||||||| |||||||||    
T  2737 acacttcttaaaatcgtaaatgagataattaacaaattatctttcaacata 2787  T

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Target: scaffold0292; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 9774 - 9824
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatccttcaacata 95  Q
    ||||||| ||||||| ||||||||||||||||  ||||||| |||||||||    
T  9774 acacttcttaaaatcgtaaatgagataattaacaaattatctttcaacata 9824  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 17483 - 17421
Alignment:
Q  34 aacggaatgctacacttcataaaatcataaatgagataattaattaattatccttcaacataa 96  Q
    ||||||||| ||||||||  |||||||||||  ||||||||||  ||||||| ||||||||||    
T  17483 aacggaatgttacacttctaaaaatcataaaacagataattaacaaattatctttcaacataa 17421  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 411866 - 411816
Alignment:
Q  136 acgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  411866 acgcaggcctcatcaaaatatctcataaattcagttaaacaacttattcat 411816  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 9374 - 9337
Alignment:
Q  53 taaaatcataaatgagataattaattaattatccttca 90  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9374 taaaatcataaatgggataattaactaattatccttca 9337  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 24931 - 24984
Alignment:
Q  33 aaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatc 85  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||| ||||||||    
T  24931 aaacagaatgatacacttcttaaaaatcataaatgagataattaactaattatc 24984  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 22499 - 22443
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaatc 99  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||  ||||||||||||    
T  22499 acacttcttaaagtcataaaagagataattaactaattatcctcgtcaacataaatc 22443  T

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Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 39572 - 39517
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaat 98  Q
    ||||||| |||| ||||||| ||||||||||| ||||||||||  |||||||||||    
T  39572 acacttcttaaagtcataaaagagataattaactaattatcctcgtcaacataaat 39517  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 12568 - 12624
Alignment:
Q  45 acacttcataaaatcataaatgagataattaattaattatcct--tcaacataaatc 99  Q
    ||||||| |||||||||||| |||||| |||| ||||||||||  ||||||||||||    
T  12568 acacttcttaaaatcataaaagagatacttaactaattatcctcgtcaacataaatc 12624  T

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Target: scaffold2007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 537 - 477
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    ||||||||||||||| |||| ||||| |||||||||  | |||||| ||||||||||||||    
T  537 taaacggaatgctacgcttcttaaaaatcataaatggaacaattaactaattatccttcaa 477  T

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Target: scaffold0825 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 404 - 344
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| | |||||||||| |||||||||| |||||||||||||||| ||||    
T  404 aagtcttggcacgcaggtctcatcaaaatatctcataaactcagttaaacaacttattcat 344  T

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Target: scaffold0686 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 4889 - 4921
Alignment:
Q  32 taaacggaatgctacacttcataaaatcataaa 64  Q
    |||||||||||||||||||| ||||||||||||    
T  4889 taaacggaatgctacacttcttaaaatcataaa 4921  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 4829 - 4893
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaacata 95  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| |||  | ||||| |||||||||    
T  4829 taaacagaatgctacacttcttaaaaatcataaatgagataaataacaatttatctttcaacata 4893  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20037 - 20097
Alignment:
Q  126 aagttttggtacgcatgcctcatcaaaacatctcataaa-tcagttaaacaacttaatcat 185  Q
    |||| |||| ||||| |||||||||||  |||||||||| |||||||||||||||| ||||    
T  20037 aagtcttggcacgcaggcctcatcaaagtatctcataaattcagttaaacaacttattcat 20097  T

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Target: scaffold0282 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 11832 - 11780
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| ||||||||    
T  11832 aacggaatgctacacttctaaaatataataaatgagataattaactaattatc 11780  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 5600 - 5540
Alignment:
Q  32 taaacggaatgctacacttcataaaa-tcataaatgagataattaattaattatccttcaa 91  Q
    |||||||||||| ||||||| ||||| |||||||||  |||||||| ||||| ||||||||    
T  5600 taaacggaatgccacacttcttaaaaatcataaatggaataattaactaattttccttcaa 5540  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 10586 - 10642
Alignment:
Q  34 aacggaatgctacacttcataaa-atcataaatgagataattaattaattatccttc 89  Q
    ||||||||||||||||||  ||| || ||||||||||||||||| |||| |||||||    
T  10586 aacggaatgctacacttctaaaatataataaatgagataattaactaatcatccttc 10642  T

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