View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19050_high_31 (Length: 321)
Name: NF19050_high_31
Description: NF19050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19050_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 2 - 303
Target Start/End: Complemental strand, 51845096 - 51844795
Alignment:
| Q |
2 |
cagagaactcattgttatcgagatgtaactcaccgaggaaacgaagatttgttaatgagtctggtatatttcctgagaatttattattgttgagccatac |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51845096 |
cagagaactcattgttatcgagatgtaactcaccgaggaaacgaagatttgttaatgagtctggtatatttcctgagaatttattattgttgagccatac |
51844997 |
T |
|
| Q |
102 |
tttcttgagagaacctaaatgagagaaaaaatctggaggaataggtcctgagaattggtttaatgataaataaagagctttaagagcaccaagtttgttg |
201 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51844996 |
tttcttgagagaacctaaatgagaaaaaaaatctggaggaataggtcctgagaattggtttaatgataaataaagagctttaagagcaccaagtttgttg |
51844897 |
T |
|
| Q |
202 |
aattcaggaattgcaccagagaaagagttgttaacaaaactaatggttcttaacgttggaatttgtaaaagagaatcaatgtcaatttttccagagaggc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51844896 |
aattcaggaattgcaccagagaaagagttgttaacaaaactaatggttcttaacgttggaatttgtaaaagagaatcaatgtcaatttttccagagaggc |
51844797 |
T |
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| Q |
302 |
ct |
303 |
Q |
| |
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|| |
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| T |
51844796 |
ct |
51844795 |
T |
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