View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19050_high_32 (Length: 318)

Name: NF19050_high_32
Description: NF19050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19050_high_32
NF19050_high_32
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-306)||(39205-39510)
scaffold0106 (3-42)||(37077-37115)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-306)||(29213-29518)
scaffold0076 (1-306)||(34614-34919)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-306)||(173629-173934)
scaffold0011 (17-49)||(20831-20863)
[»] chr7 (29 HSPs)
chr7 (1-306)||(19617099-19617404)
chr7 (3-312)||(38828858-38829167)
chr7 (3-268)||(27565669-27565935)
chr7 (72-291)||(15214296-15214516)
chr7 (117-312)||(13744837-13745032)
chr7 (117-312)||(30820317-30820512)
chr7 (110-312)||(32772125-32772328)
chr7 (117-312)||(36685310-36685505)
chr7 (3-61)||(23443153-23443211)
chr7 (72-122)||(1856490-1856541)
chr7 (72-122)||(13917662-13917713)
chr7 (72-122)||(16107948-16107999)
chr7 (72-122)||(25926389-25926440)
chr7 (72-122)||(42374394-42374445)
chr7 (9-76)||(14580716-14580784)
chr7 (76-122)||(13648193-13648240)
chr7 (3-90)||(14249687-14249773)
chr7 (9-76)||(45186386-45186454)
chr7 (72-122)||(11662017-11662068)
chr7 (72-118)||(13256608-13256655)
chr7 (72-122)||(14188383-14188434)
chr7 (3-90)||(14265157-14265243)
chr7 (78-122)||(15727461-15727506)
chr7 (7-76)||(20752194-20752263)
chr7 (70-122)||(831722-831774)
chr7 (70-122)||(1196902-1196954)
chr7 (17-49)||(15690926-15690958)
chr7 (17-49)||(15698519-15698551)
chr7 (17-49)||(21518337-21518369)
[»] chr3 (35 HSPs)
chr3 (1-306)||(14085335-14085640)
chr3 (1-306)||(14090736-14091041)
chr3 (3-312)||(14647049-14647358)
chr3 (1-282)||(49400358-49400640)
chr3 (3-307)||(10988828-10989132)
chr3 (1-282)||(24122272-24122553)
chr3 (3-301)||(19444394-19444695)
chr3 (3-301)||(19450960-19451261)
chr3 (3-306)||(12270499-12270801)
chr3 (69-312)||(30123460-30123704)
chr3 (72-287)||(11913543-11913759)
chr3 (1-158)||(8579259-8579416)
chr3 (76-312)||(51602617-51602855)
chr3 (117-312)||(13520079-13520274)
chr3 (117-312)||(14479645-14479840)
chr3 (117-286)||(50755463-50755632)
chr3 (117-293)||(31224014-31224190)
chr3 (152-282)||(8582514-8582644)
chr3 (3-65)||(14288196-14288258)
chr3 (3-57)||(35985649-35985703)
chr3 (72-122)||(42439-42490)
chr3 (72-122)||(5224234-5224285)
chr3 (3-62)||(13054865-13054924)
chr3 (72-122)||(15466006-15466057)
chr3 (72-121)||(13437151-13437201)
chr3 (72-122)||(10833395-10833446)
chr3 (72-122)||(16324630-16324681)
chr3 (72-122)||(43549745-43549796)
chr3 (7-57)||(42110153-42110203)
chr3 (78-122)||(17547567-17547612)
chr3 (76-122)||(26054528-26054575)
chr3 (27-65)||(15934136-15934174)
chr3 (27-65)||(15954141-15954179)
chr3 (28-65)||(16822990-16823027)
chr3 (70-122)||(2247738-2247790)
[»] chr2 (17 HSPs)
chr2 (1-306)||(6743314-6743619)
chr2 (3-312)||(21132599-21132909)
chr2 (1-306)||(201425-201730)
chr2 (1-282)||(43694228-43694509)
chr2 (72-296)||(10039149-10039374)
chr2 (137-307)||(26861392-26861562)
chr2 (3-65)||(25365077-25365139)
chr2 (3-90)||(24668981-24669067)
chr2 (3-90)||(22795816-22795902)
chr2 (3-48)||(21120775-21120820)
chr2 (72-122)||(31346031-31346082)
chr2 (3-62)||(17634857-17634916)
chr2 (76-122)||(41301023-41301070)
chr2 (117-235)||(13361806-13361924)
chr2 (78-122)||(6477332-6477377)
chr2 (72-122)||(21072778-21072829)
chr2 (3-49)||(22841918-22841964)
[»] chr1 (16 HSPs)
chr1 (1-306)||(21542860-21543165)
chr1 (1-306)||(42094958-42095263)
chr1 (3-312)||(2332079-2332387)
chr1 (189-302)||(45496742-45496855)
chr1 (3-65)||(5381587-5381649)
chr1 (117-169)||(45499234-45499286)
chr1 (9-90)||(21733581-21733660)
chr1 (3-62)||(21744755-21744814)
chr1 (76-122)||(22130119-22130166)
chr1 (72-122)||(28313260-28313311)
chr1 (72-122)||(45574109-45574160)
chr1 (3-57)||(21986056-21986110)
chr1 (9-76)||(21699046-21699114)
chr1 (26-65)||(31926491-31926530)
chr1 (82-122)||(13527814-13527855)
chr1 (14-65)||(23634471-23634523)
[»] chr8 (23 HSPs)
chr8 (1-306)||(23825944-23826249)
chr8 (3-312)||(44432658-44432968)
chr8 (3-306)||(3698406-3698710)
chr8 (72-312)||(364586-364827)
chr8 (72-312)||(42559543-42559783)
chr8 (69-191)||(21325852-21325974)
chr8 (69-198)||(21321254-21321383)
chr8 (72-191)||(20494438-20494558)
chr8 (117-266)||(26859364-26859513)
chr8 (3-57)||(25623817-25623871)
chr8 (3-90)||(21299329-21299415)
chr8 (72-122)||(8413838-8413889)
chr8 (72-122)||(11775625-11775676)
chr8 (3-90)||(20011270-20011356)
chr8 (3-90)||(10607810-10607898)
chr8 (3-62)||(33089840-33089899)
chr8 (72-122)||(14397000-14397051)
chr8 (72-122)||(19882859-19882910)
chr8 (17-49)||(22520976-22521008)
chr8 (72-122)||(20387399-20387449)
chr8 (76-122)||(25483535-25483582)
chr8 (17-49)||(15268175-15268207)
chr8 (78-122)||(15635191-15635235)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-282)||(46047-46329)
scaffold0028 (1-282)||(51451-51733)
scaffold0028 (3-57)||(91756-91810)
[»] chr5 (19 HSPs)
chr5 (3-312)||(43242527-43242836)
chr5 (1-282)||(1856496-1856777)
chr5 (1-282)||(21674466-21674747)
chr5 (3-291)||(22757834-22758124)
chr5 (72-312)||(36460767-36461007)
chr5 (117-312)||(21554460-21554655)
chr5 (117-312)||(21557105-21557300)
chr5 (117-312)||(24830059-24830254)
chr5 (9-101)||(18819804-18819895)
chr5 (3-65)||(21495825-21495887)
chr5 (3-67)||(10036074-10036138)
chr5 (72-122)||(18419363-18419414)
chr5 (72-122)||(27868664-27868715)
chr5 (72-122)||(33472653-33472704)
chr5 (107-143)||(19077363-19077399)
chr5 (3-43)||(19077459-19077499)
chr5 (72-122)||(21553477-21553528)
chr5 (3-87)||(21901015-21901098)
chr5 (280-312)||(43242881-43242913)
[»] chr6 (24 HSPs)
chr6 (3-312)||(7430320-7430629)
chr6 (3-307)||(14593648-14593953)
chr6 (3-312)||(8759463-8759773)
chr6 (50-312)||(8767257-8767519)
chr6 (72-312)||(1254554-1254795)
chr6 (72-312)||(34296281-34296523)
chr6 (72-307)||(1090-1316)
chr6 (117-312)||(34140687-34140883)
chr6 (117-312)||(34153303-34153499)
chr6 (72-158)||(8188-8275)
chr6 (117-205)||(7680748-7680836)
chr6 (3-90)||(14725285-14725371)
chr6 (72-122)||(13765258-13765309)
chr6 (72-122)||(23225947-23225998)
chr6 (72-122)||(23956774-23956825)
chr6 (72-122)||(23415816-23415867)
chr6 (72-121)||(27557575-27557625)
chr6 (3-38)||(8767224-8767259)
chr6 (9-43)||(14583915-14583949)
chr6 (78-122)||(1588655-1588700)
chr6 (9-65)||(18315137-18315194)
chr6 (72-119)||(31021810-31021859)
chr6 (107-143)||(14583819-14583855)
chr6 (78-122)||(15816757-15816801)
[»] scaffold0546 (1 HSPs)
scaffold0546 (3-312)||(9862-10172)
[»] scaffold0109 (1 HSPs)
scaffold0109 (3-312)||(3135-3445)
[»] chr4 (11 HSPs)
chr4 (3-306)||(11201422-11201726)
chr4 (3-306)||(11208153-11208457)
chr4 (72-312)||(56114850-56115091)
chr4 (76-312)||(24046572-24046809)
chr4 (3-66)||(35461558-35461622)
chr4 (72-122)||(45005856-45005907)
chr4 (7-65)||(14822309-14822367)
chr4 (72-118)||(18230656-18230703)
chr4 (72-122)||(28386155-28386206)
chr4 (186-220)||(16297938-16297972)
chr4 (70-122)||(15747645-15747697)
[»] scaffold0635 (1 HSPs)
scaffold0635 (72-296)||(7696-7921)
[»] scaffold0077 (2 HSPs)
scaffold0077 (72-312)||(17293-17533)
scaffold0077 (76-291)||(22197-22413)
[»] scaffold0599 (1 HSPs)
scaffold0599 (72-287)||(819-1035)
[»] scaffold0059 (1 HSPs)
scaffold0059 (117-295)||(49439-49617)
[»] scaffold0026 (3 HSPs)
scaffold0026 (138-312)||(123643-123816)
scaffold0026 (3-105)||(143581-143684)
scaffold0026 (3-85)||(36502-36583)
[»] scaffold0577 (1 HSPs)
scaffold0577 (116-312)||(8752-8948)
[»] scaffold0104 (6 HSPs)
scaffold0104 (110-312)||(26723-26925)
scaffold0104 (110-312)||(28105-28307)
scaffold0104 (117-312)||(14646-14842)
scaffold0104 (117-312)||(16666-16862)
scaffold0104 (139-312)||(8015-8189)
scaffold0104 (139-312)||(18686-18860)
[»] scaffold0379 (1 HSPs)
scaffold0379 (117-312)||(10496-10692)
[»] scaffold0139 (1 HSPs)
scaffold0139 (3-65)||(2078-2140)
[»] scaffold0178 (1 HSPs)
scaffold0178 (3-65)||(26391-26453)
[»] scaffold0249 (1 HSPs)
scaffold0249 (3-101)||(5936-6034)
[»] scaffold2016 (1 HSPs)
scaffold2016 (3-61)||(10-68)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-65)||(13385-13449)
[»] scaffold0201 (1 HSPs)
scaffold0201 (3-65)||(27255-27318)
[»] scaffold0192 (1 HSPs)
scaffold0192 (3-90)||(21776-21862)
[»] scaffold0266 (2 HSPs)
scaffold0266 (3-65)||(23954-24016)
scaffold0266 (3-90)||(2850-2936)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-75)||(71506-71580)
[»] scaffold0003 (2 HSPs)
scaffold0003 (3-65)||(80323-80386)
scaffold0003 (3-65)||(100045-100108)
[»] scaffold0297 (1 HSPs)
scaffold0297 (3-57)||(928-982)
[»] scaffold0165 (2 HSPs)
scaffold0165 (4-57)||(501-554)
scaffold0165 (1-57)||(18786-18842)
[»] scaffold1276 (1 HSPs)
scaffold1276 (72-126)||(1047-1102)
[»] scaffold0601 (1 HSPs)
scaffold0601 (117-312)||(4310-4505)
[»] scaffold0453 (1 HSPs)
scaffold0453 (72-122)||(7100-7151)
[»] scaffold0278 (1 HSPs)
scaffold0278 (72-122)||(23808-23859)
[»] scaffold0200 (1 HSPs)
scaffold0200 (72-122)||(18505-18556)
[»] scaffold0117 (1 HSPs)
scaffold0117 (72-122)||(42583-42634)
[»] scaffold0061 (1 HSPs)
scaffold0061 (3-90)||(56370-56456)
[»] scaffold0058 (1 HSPs)
scaffold0058 (72-122)||(39902-39953)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-90)||(142177-142263)
[»] scaffold0001 (3 HSPs)
scaffold0001 (72-122)||(169351-169402)
scaffold0001 (72-122)||(176704-176755)
scaffold0001 (27-76)||(448848-448897)
[»] scaffold0462 (1 HSPs)
scaffold0462 (3-57)||(8384-8438)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-65)||(2942-3000)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-65)||(17342-17400)
[»] scaffold0008 (2 HSPs)
scaffold0008 (3-48)||(124085-124130)
scaffold0008 (78-122)||(11505-11549)
[»] scaffold0334 (1 HSPs)
scaffold0334 (72-119)||(2039-2087)
[»] scaffold0422 (1 HSPs)
scaffold0422 (72-122)||(3875-3926)
[»] scaffold0326 (2 HSPs)
scaffold0326 (26-65)||(4569-4608)
scaffold0326 (26-65)||(19751-19790)
[»] scaffold0293 (1 HSPs)
scaffold0293 (72-122)||(19389-19440)
[»] scaffold0151 (1 HSPs)
scaffold0151 (72-122)||(10006-10057)
[»] scaffold0051 (1 HSPs)
scaffold0051 (77-122)||(32054-32100)
[»] scaffold0924 (1 HSPs)
scaffold0924 (27-100)||(3166-3238)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-76)||(206911-206960)
[»] scaffold1290 (1 HSPs)
scaffold1290 (9-76)||(429-497)
[»] scaffold0222 (1 HSPs)
scaffold0222 (3-65)||(4195-4258)
[»] scaffold0203 (1 HSPs)
scaffold0203 (3-86)||(16433-16515)
[»] scaffold0091 (2 HSPs)
scaffold0091 (26-65)||(21952-21991)
scaffold0091 (26-65)||(26149-26188)
[»] scaffold0555 (1 HSPs)
scaffold0555 (26-76)||(2324-2374)
[»] scaffold0050 (1 HSPs)
scaffold0050 (26-64)||(13769-13807)
[»] scaffold1853 (1 HSPs)
scaffold1853 (9-65)||(12-69)
[»] scaffold1783 (1 HSPs)
scaffold1783 (78-122)||(1258-1302)
[»] scaffold0610 (1 HSPs)
scaffold0610 (3-90)||(6451-6538)


Alignment Details
Target: scaffold0106 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 39510 - 39205
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39510 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 39411  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  39410 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 39311  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  39310 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 39212  T
Q  300 gtctgat 306  Q
    |||||||    
T  39211 gtctgat 39205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 37115 - 37077
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatt 42  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37115 tttactttcaatagtatagattg-aattctgattttgatt 37077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 29213 - 29518
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29213 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 29312  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  29313 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 29412  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  29413 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 29511  T
Q  300 gtctgat 306  Q
    |||||||    
T  29512 gtctgat 29518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 34614 - 34919
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34614 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 34713  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  34714 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 34813  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  34814 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 34912  T
Q  300 gtctgat 306  Q
    |||||||    
T  34913 gtctgat 34919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 173629 - 173934
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  173629 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 173728  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  173729 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 173828  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  173829 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 173927  T
Q  300 gtctgat 306  Q
    |||||||    
T  173928 gtctgat 173934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 20831 - 20863
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    |||||||| ||||||||||||||||||||||||    
T  20831 tatagattataattctgattttgatttaacatg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 19617404 - 19617099
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19617404 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 19617305  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  19617304 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 19617205  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  19617204 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 19617106  T
Q  300 gtctgat 306  Q
    |||||||    
T  19617105 gtctgat 19617099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 3 - 312
Target Start/End: Complemental strand, 38829167 - 38828858
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  38829167 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttga 38829068  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  38829067 atgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatgg 38828968  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||    
T  38828967 tgatgattatggatgattttggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaattccaatatgt 38828869  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  38828868 ctgatgctgtc 38828858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 268
Target Start/End: Complemental strand, 27565935 - 27565669
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||| ||||||     
T  27565935 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattggttaatttgggattatgttttgattattgatttttgt 27565836  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  27565835 atgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggtttaacgttttaatgatagggtaatcatatgg 27565736  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtag 268  Q
    ||||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||||||    
T  27565735 tgatgtttatggatgattttggagagtttagggttaagagatggagccaaggaggttcccatggtag 27565669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 15214516 - 15214296
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaag-tgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||     
T  15214516 ttgggattaggttttgattattgacttttgaatgaaaaaatgtagaaaccatataattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 15214417  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||||||||  | ||  | |||||||||||||||||||||||      
T  15214416 ttaacgtttcaatgatagggtaatcatatggtgacgattatggatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 15214317  T
Q  271 aatcgcagaaaaatctgtaat 291  Q
    |||||||||||||||||||||    
T  15214316 aatcgcagaaaaatctgtaat 15214296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 13744837 - 13745032
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||  ||||||| |    
T  13744837 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggttataattatggacg 13744936  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||||||||  ||||||||||||||  || ||||||  |||| ||||||||||    
T  13744937 attttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaataagtgatttcagcatgtatgatgatgtc 13745032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 30820317 - 30820512
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||| |    
T  30820317 aaccatagaattgaacggtgaaaagagtggttaaccaggtagggtagtgatggattaacgttttaatgatagggtaatcatacggtgatgattatggacg 30820416  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||| |||  ||||  | ||||||| |||||||||||||||  |||||||||||||||||| ||||||  |||| ||||| ||||    
T  30820417 attttggagagtttaaggtcaagaaacggagccaagaaggctcccatggtagaaaatcgcagaaaaatctgtgatttcagcatgtatgatgttgtc 30820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 32772328 - 32772125
Alignment:
Q  110 gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgttt 209  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||||| ||| ||||| ||    
T  32772328 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcggataggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 32772229  T
Q  210 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgc-agaaaaatctgtaatttcaatatgtctgatga 308  Q
    ||| ||||||||||||||||||||||  | ||  | |||||||||||||||||||||||  |||||| | ||||||||||||| |||  |||| |||||     
T  32772228 atgaatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaaatctgtaatatcagcatgtatgatgc 32772129  T
Q  309 tgtc 312  Q
    ||||    
T  32772128 tgtc 32772125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 36685310 - 36685505
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||| ||||||| |    
T  36685310 aaccatagaattgaacagtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatggggtaatcatatggtgatgattatggacg 36685409  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||  | ||||||||||||||| |||||||  ||||| |||||||| ||| ||||||  |||| ||||| ||||    
T  36685410 attttggagagtttagggtcaagaaacggagccaaggaggctcctatggtagaaaatcgtagaaaaatatgtgatttcagcatgtatgatgctgtc 36685505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 23443211 - 23443153
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaa 61  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23443211 tttaatttcaatagtatagattgtaattctgattttggtttaacatgtttctggtagaa 23443153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 1856490 - 1856541
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  1856490 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 1856541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 13917662 - 13917713
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13917662 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13917713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 16107948 - 16107999
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  16107948 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 16107999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 25926389 - 25926440
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25926389 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 25926440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 42374394 - 42374445
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42374394 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 14580716 - 14580784
Alignment:
Q  9 ttcaatagtatagattgt-aattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||| ||||||||||| | ||||||||||||||||||||| |||| |||||||||||| ||| ||||||    
T  14580716 ttcagtagtatagatttttaattctgattttgatttaacaagtttatggtagaaattgggaattttggg 14580784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 13648240 - 13648193
Alignment:
Q  76 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13648240 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 14249687 - 14249773
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||  |||||||  |||||| | |||||||| |||| || |||||    
T  14249687 tttactttcaatagtgtagattataattctgattttggtttaacatagttctggttaaaattg-ggaatttgggtttagattatgatt 14249773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 45186454 - 45186386
Alignment:
Q  9 ttcaatagtatagat-tgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||| |||||||||| | |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  45186454 ttcagtagtatagatgtttaattctgattttggtttaacaggtttatggtagaaattgggaattttggg 45186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 11662068 - 11662017
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||| |||||||    
T  11662068 ttgggattatgttttgattattgatttttgaattgaaaagtgtaaaaaccat 11662017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 13256655 - 13256608
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaa 118  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||    
T  13256655 ttgggattaggttttgattatttatttttgaattgaaaagtgtagaaa 13256608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 14188383 - 14188434
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||||||||    
T  14188383 ttgggattagcttttgattattgatttttgaattgaaatgtgtagaaaccat 14188434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 14265157 - 14265243
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||| |||||| |||||||||||||  ||||||||  |||||||  |||||| | |||||||| |||| || |||||    
T  14265157 tttactttcaatagtgtagattataattctgattttagtttaacatagttctggttaaaattg-ggaatttgggtttagattatgatt 14265243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 15727461 - 15727506
Alignment:
Q  78 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||    
T  15727461 ttaggttttgattatagatttttgaattgaaaagtgtagaaaccat 15727506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 20752263 - 20752194
Alignment:
Q  7 ctttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    ||||||||||| || |||||||||||||||||| ||| ||||  |||||||  ||||| || ||||||||    
T  20752263 ctttcaatagtgtatattgtaattctgattttggtttgacatagttctggttaaaatttaggaatttggg 20752194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 831722 - 831774
Alignment:
Q  70 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  831722 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 831774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 1196902 - 1196954
Alignment:
Q  70 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  1196902 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 1196954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 15690958 - 15690926
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    |||||||| ||||||||||||||||||||||||    
T  15690958 tatagattataattctgattttgatttaacatg 15690926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 15698551 - 15698519
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    |||||||| ||||||||||||||||||||||||    
T  15698551 tatagattataattctgattttgatttaacatg 15698519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 21518337 - 21518369
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    ||||| |||||||||||||||||||||||||||    
T  21518337 tataggttgtaattctgattttgatttaacatg 21518369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 14085640 - 14085335
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085640 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 14085541  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  14085540 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 14085441  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  14085440 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 14085342  T
Q  300 gtctgat 306  Q
    |||||||    
T  14085341 gtctgat 14085335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 14091041 - 14090736
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14091041 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 14090942  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  14090941 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 14090842  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  14090841 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 14090743  T
Q  300 gtctgat 306  Q
    |||||||    
T  14090742 gtctgat 14090736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 14647049 - 14647358
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  14647049 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttgg 14647148  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  14647149 atgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatgg 14647248  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  14647249 tgatgattatggatgattttggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgt 14647347  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  14647348 ctgatgctgtc 14647358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 49400640 - 49400358
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49400640 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 49400541  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49400540 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatat 49400441  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||||||  ||||||||||||    
T  49400440 ggtgatgtttatggatgattttggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 49400358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 3 - 307
Target Start/End: Original strand, 10988828 - 10989132
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||    
T  10988828 tttactttcaatagtatagattataattctgattttgatttaatatgtttctggtagaaattgggaaatttaagattaggttttgattattgatttttga 10988927  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10988928 atgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatgg 10989027  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| || |  | |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  10989028 tgatgattatggatgattttggagagtttagggttaagtaacggagccaaggaggctcccatggtagaaaatcgca-aaaaatctgtaatttcaatatgt 10989126  T
Q  302 ctgatg 307  Q
    ||||||    
T  10989127 ctgatg 10989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 24122272 - 24122553
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24122272 gatttactttcaatagtatagattgtaattttgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt- 24122370  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24122371 gaatgaaaaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatat 24122470  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||||||  ||||||||||||    
T  24122471 ggtgatgtttatggatgattttggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 24122553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 301
Target Start/End: Complemental strand, 19444695 - 19444394
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaattgagaaa-tttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  19444695 tttactttcaatagtatagattgtaattctaattttggatttaacatgtttctggtagaaattgggaaaatttgggattaggttttgattattgattttt 19444596  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||    
T  19444595 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaattaggtaggttagtgatgggttaacgttttaatgatagggtaatcctat 19444496  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    ||||||| ||||||||||||||||||||||||||||  |||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  19444495 ggtgatgattatggatgattttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgtagaaaaatctgtaatttcaatat 19444396  T
Q  300 gt 301  Q
    ||    
T  19444395 gt 19444394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 3 - 301
Target Start/End: Complemental strand, 19451261 - 19450960
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaattgagaaa-tttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  19451261 tttactttcaatagtatagattgtaattctaattttggatttaacatgtttctggtagaaattgggaaaatttgggattaggttttgattattgattttt 19451162  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  19451161 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaataaggtaggttagtgatgggttaacattttaatgatagggtaatcatat 19451062  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    ||||||| ||||||||||||||||||||||||||||  |||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  19451061 ggtgatgattatggatgattttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgtagaaaaatctgtaatttcaatat 19450962  T
Q  300 gt 301  Q
    ||    
T  19450961 gt 19450960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 12270499 - 12270801
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  12270499 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattggggaatttgggattaggttttgattattgatttttga 12270598  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12270599 atgaaaaagtgtagaaaccatagaattgaatggt-aaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatgg 12270697  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||  || |||||||||||  ||||||||||  ||| |||| ||||| |||||||| |||||||    
T  12270698 tgatgattatggatgattttggagagtttagggttaagagatggagccaaggaggtccccatggtagaaaattgcag-aaaatgtgtaattttaatatgt 12270796  T
Q  302 ctgat 306  Q
    |||||    
T  12270797 ctgat 12270801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 69 - 312
Target Start/End: Original strand, 30123460 - 30123704
Alignment:
Q  69 aatttgggattaggttttgattattgg-tttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtga 166  Q
    |||||||||||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30123460 aatttgggattaagttttgattattgaatttttgaatgaaaaagtgtagaaaccgtagaattgaatggtgaaaagagtggttaatcaggtaggttagtga 30123559  T
Q  167 tgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggt 266  Q
    ||| ||||  ||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||    
T  30123560 tggtttaattttttaatgatagtgttatcatatggtgatgattatggatgattttggagagtttagggttaagaaatggagccaatgaggctcccatggt 30123659  T
Q  267 aggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||  |||||||| |||||||||| ||||||||||||||||| ||||    
T  30123660 agaaaatcgcag-aaaatctgtattttcaatatgtctgatgctgtc 30123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 72 - 287
Target Start/End: Complemental strand, 11913759 - 11913543
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  11913759 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 11913660  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||  | ||  | |||||||||||||||||||||||      
T  11913659 ttaacgtttcaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 11913560  T
Q  271 aatcgcagaaaaatctg 287  Q
    |||||||||||||||||    
T  11913559 aatcgcagaaaaatctg 11913543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8579259 - 8579416
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8579259 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattgg-tttt 8579357  T
Q  101 gaatgaa-aagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtag 158  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8579358 gaatgaagaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtag 8579416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 51602617 - 51602855
Alignment:
Q  76 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaa 174  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||||    
T  51602617 gattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgagggattaa 51602716  T
Q  175 cgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagttt-agggttgagaattgaagccaaggaggctcccatggtaggcaat 273  Q
    ||||| ||| ||||||||||||||||| || | ||||||||||||||||||||||| |||||  | ||  | |||||||||||||||||||||||  |||    
T  51602717 cgtttcaatgatagggtaatcatatggcgaggattatggatgattttggagagttttagggtcaaaaaacggagccaaggaggctcccatggtagaaaat 51602816  T
Q  274 cgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    || ||||||||||||||| |||  |||| ||||| ||||    
T  51602817 cgtagaaaaatctgtaatatcagcatgtatgatgctgtc 51602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 13520274 - 13520079
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||| |    
T  13520274 aaccaaagaattgaacggtgaaaagagtggttaattaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 13520175  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||    |||||||||||||||||||||||  |||||||||||||||||| ||||||  |||| ||||||||||    
T  13520174 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtgatttcagcatgtatgatgatgtc 13520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 14479645 - 14479840
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||| || |||| |||||||| |||||||||||||||||||||| ||||||| |    
T  14479645 aaccatagaattgaacggtgaaaagtgtcgttaatcaggtaggttagtgagggattaatgttttaatgatagggtaatcatatggtgatgattatggacg 14479744  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||| ||||  | |||||||||||||||||||||||  |||||||||||||||||| | ||||  |||||||||| ||||    
T  14479745 attttggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtgacttcagaatgtctgatgctgtc 14479840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 117 - 286
Target Start/End: Original strand, 50755463 - 50755632
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||| |||| || |    
T  50755463 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatggattaatgttctaatgatagggtaatcatatggtgatgattattgacg 50755562  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatct 286  Q
    |||||||||||||||||||  |||| || |||||||||||||||||||||||  ||||||||||||||||    
T  50755563 attttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgcagaaaaatct 50755632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 117 - 293
Target Start/End: Original strand, 31224014 - 31224190
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |    
T  31224014 aaccatagaattgaacggtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggacg 31224113  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaattt 293  Q
    |||||||||||||||||||  ||||  | |||||| ||||||||||||||||  |||||||||||||| ||| ||||    
T  31224114 attttggagagtttagggtcaagaaacggagccaatgaggctcccatggtagaaaatcgcagaaaaatatgtgattt 31224190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 8582514 - 8582644
Alignment:
Q  152 caggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaa 251  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||    
T  8582514 caggtaggttagtgataggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttaagagatggagccaa 8582613  T
Q  252 ggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||| |||||||||||  ||||||||||||    
T  8582614 ggaggttcccatggtagaaaatcgcagaaaa 8582644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 14288196 - 14288258
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  14288196 tttactctcaatagtatagattgtaattctgattttggtttaacatgtttctggaagaaattg 14288258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 35985703 - 35985649
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35985703 tttactttcaatagtatagattgtaattctgattttgatttaacatagttctggt 35985649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 42490 - 42439
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42490 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 5224285 - 5224234
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  5224285 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 5224234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 13054924 - 13054865
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaa 62  Q
    ||||||||||||||| |||||  |||||||||||||| ||||||||||| ||||||||||    
T  13054924 tttactttcaatagtctagatcataattctgattttggtttaacatgttcctggtagaaa 13054865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 15466057 - 15466006
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  15466057 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 15466006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 13437201 - 13437151
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaacca 121  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  13437201 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaacca 13437151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 10833395 - 10833446
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  10833395 ttgggattaggttttcattattgatttttgaattgaaaagtgtagaaaccat 10833446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 16324630 - 16324681
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  16324630 ttgggattaggttttgattattgatttttgaattggaaagtgtagaaaccat 16324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 43549745 - 43549796
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  43549745 ttgggattaggttttgattattgatttttaaattgaaaagtgtagaaaccat 43549796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 42110203 - 42110153
Alignment:
Q  7 ctttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  |||||||    
T  42110203 ctttcaatagtgtagattgtaattctgattttgttttaacatagttctggt 42110153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 17547567 - 17547612
Alignment:
Q  78 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  17547567 ttaggttttgattattgatttttgaattgaaaagtgtagaaaccat 17547612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 26054528 - 26054575
Alignment:
Q  76 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  26054528 gattaggttttgattattgatttttgaattgaaaattgtagaaaccat 26054575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 15934136 - 15934174
Alignment:
Q  27 aattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  15934136 aattctgattttgatttaacaagtttatggtagaaattg 15934174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 15954141 - 15954179
Alignment:
Q  27 aattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  15954141 aattctgattttgatttaacaagtttatggtagaaattg 15954179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 16822990 - 16823027
Alignment:
Q  28 attctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  16822990 attctgattttgatttaacaggtttatggtagaaattg 16823027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 2247738 - 2247790
Alignment:
Q  70 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  2247738 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 2247790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 6743314 - 6743619
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6743314 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 6743413  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  6743414 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 6743513  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  6743514 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 6743612  T
Q  300 gtctgat 306  Q
    |||||||    
T  6743613 gtctgat 6743619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 21132599 - 21132909
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  21132599 tttactttcaatagtataaattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttcggattaggttttgattattgatttttga 21132698  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21132699 atgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtgatcatatgg 21132798  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21132799 tgatgattatggatgattttggagagtttagggttaagaattggagccaaggaggctcccatggtaggaaatcgcagaaaaatctgcaatttcaatatgt 21132898  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  21132899 ctgatgctgtc 21132909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 201730 - 201425
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  201730 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 201631  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  201630 gaatgaaaaagtgtagaaaccataaaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 201531  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  201530 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 201432  T
Q  300 gtctgat 306  Q
    |||||||    
T  201431 gtctgat 201425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 43694509 - 43694228
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43694509 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt- 43694411  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43694410 gaatgaaaaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatat 43694311  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||||||  ||||| ||||||    
T  43694310 ggtgatgtttatggatgattttggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgtagaaaa 43694228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 72 - 296
Target Start/End: Original strand, 10039149 - 10039374
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  10039149 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatgga 10039248  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||  | |||||||||||||||||||||||      
T  10039249 ttaacgttttaatgatagggtaatcatatggtgatgattatggattattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaa 10039348  T
Q  271 aatcgcagaaaaatctgtaatttcaa 296  Q
    ||||||||||||||||||||| ||||    
T  10039349 aatcgcagaaaaatctgtaatatcaa 10039374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 307
Target Start/End: Original strand, 26861392 - 26861562
Alignment:
Q  137 aaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggtt 236  Q
    |||||||||| ||||| ||||||||| ||| |  |||| ||| |||  |||||||||| ||||||||| | ||| | |||||||||| || ||||| ||     
T  26861392 aaaagagtggataatctggtaggttaatgaagaattaatgttctaacgatagggtaataatatggtgaagattaggtatgattttggtgaatttagagta 26861491  T
Q  237 gagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatg 307  Q
    || ||  | |||||||||||||||||||||||  |||||||||||||| ||| ||||||  ||||||||||    
T  26861492 gaaaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatttgtgatttcagcatgtctgatg 26861562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 25365077 - 25365139
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  25365077 tttactttcaatagtatagtttctaattctgattttggtttaacatgtttctggtagaaattg 25365139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 24668981 - 24669067
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||| | |||||||| |||| || |||||    
T  24668981 tttactttcaatagtgtagattataattctgattttggtttaacaggtttctggtagaaattg-ggaatttgggtttagattatgatt 24669067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 22795816 - 22795902
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  22795816 tttactttcaatagtatggattataattctgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 22795902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 21120775 - 21120820
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacat 48  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  21120775 tttactttcaatagtatagattgtaattctgattttggtttaacat 21120820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 31346082 - 31346031
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  31346082 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 31346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 17634916 - 17634857
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgatttt-gatttaacatgtttctggtagaaa 62  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||    
T  17634916 tttactttcaata-tgtagattgtaattctgattttggatttaacatgtttttggtagaaa 17634857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 41301023 - 41301070
Alignment:
Q  76 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  41301023 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 41301070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 13361924 - 13361806
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||| |||| || |||||||||||||| ||||| ||||||||| ||  |  |||  |||   || |||||||||||||||||||||| ||| |||      
T  13361924 aaccataaaattaaacggtgaaaagagtggataatctggtaggttaatggagaattagtgttacgatgatagggtaatcatatggtgatgattagggaca 13361825  T
Q  217 attttggagagtttagggt 235  Q
    ||||||| |||||||||||    
T  13361824 attttggcgagtttagggt 13361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 6477332 - 6477377
Alignment:
Q  78 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  6477332 ttaggttttgattattgatttttgaattgaaaagtgtagaaaccat 6477377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 21072778 - 21072829
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    |||||||||| |||||||||||| |||||||| ||||||||||| |||||||    
T  21072778 ttgggattagattttgattattgatttttgaattgaaaagtgtaaaaaccat 21072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 22841964 - 22841918
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatg 49  Q
    |||||| |||||  |||||||| ||||||||||||||||||||||||    
T  22841964 tttactctcaatgatatagattataattctgattttgatttaacatg 22841918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 21543165 - 21542860
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21543165 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 21543066  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  21543065 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 21542966  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  21542965 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 21542867  T
Q  300 gtctgat 306  Q
    |||||||    
T  21542866 gtctgat 21542860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 42094958 - 42095263
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42094958 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 42095057  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||     
T  42095058 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggtttgtgatgggttaacgttttaatgatagggtaatcatac 42095157  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||| | |||    
T  42095158 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaattgcag-aaaatctgtaattttagtat 42095256  T
Q  300 gtctgat 306  Q
    |||||||    
T  42095257 gtctgat 42095263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 2332079 - 2332387
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||    
T  2332079 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttt-ga 2332177  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||    
T  2332178 atgaaaaagtgtagaaaccatataattgaatggtgaaaagagtggttaatcaggtagattagtgatgggttaacgttctaatgatagggtaatcacatgg 2332277  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||    
T  2332278 tgatgattatggatgattttggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatatgtaatttcaatatgt 2332376  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  2332377 ctgatgctgtc 2332387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 45496855 - 45496742
Alignment:
Q  189 ggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgt 288  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||  ||||  | ||||||||||||| |||| ||||  ||||||||||||||||||    
T  45496855 ggtaatcatatggtgatgattatggacgattttggagagtttagagtcaagaaacggagccaaggaggcttccatagtagaaaatcgcagaaaaatctgt 45496756  T
Q  289 aatttcaatatgtc 302  Q
     |||||| ||||||    
T  45496755 gatttcagtatgtc 45496742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 5381649 - 5381587
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  5381649 tttactttcaatagtatagattgtaattctgattttggtttaacatgtttctggttgaaattg 5381587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 45499286 - 45499234
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgg 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45499286 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatgg 45499234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 21733581 - 21733660
Alignment:
Q  9 ttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| | |||||||| |||| ||||||||    
T  21733581 ttcaatagtgtagattgtaattctgattttggtttaacatgtttatggtagaaattg-ggaatttggg-ttagattttgatt 21733660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 21744755 - 21744814
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaa 62  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  21744755 tttactttcaata-tgtagattgtaattctgattttggatttaacatgtttctggtagaaa 21744814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 22130119 - 22130166
Alignment:
Q  76 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  22130119 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 22130166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 28313311 - 28313260
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  28313311 ttgggattaggttttgattattgatttttgaattgaaaagtgtaaaaaccat 28313260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 45574109 - 45574160
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  45574109 ttgggattaggttttgattattgatttttgaattgaaaagtgcagaaaccat 45574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21986056 - 21986110
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||  |||||||    
T  21986056 tttactttcaatagtgtagattataattctgattttggtttaacatagttctggt 21986110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 21699114 - 21699046
Alignment:
Q  9 ttcaatagtatagat-tgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||| |||||||||| | |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  21699114 ttcagtagtatagatgtttaattctgattttggtttaacaggtttatggtagaaattgggaattttggg 21699046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 31926491 - 31926530
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  31926491 taattctgattttgatttaacaggtttatggtagaaattg 31926530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 13527814 - 13527855
Alignment:
Q  82 gttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  13527814 gttttgattattgatttttgaattgaaaagtgtagaaaccat 13527855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 23634523 - 23634471
Alignment:
Q  14 tagtatagattgt-aattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||| | ||||||||||||| ||||||| |||| ||||||||||||    
T  23634523 tagtatagatttttaattctgattttggtttaacaggtttatggtagaaattg 23634471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 23826249 - 23825944
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23826249 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttaggattaggttttgattattggttttt 23826150  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||     
T  23826149 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgagttaacgttttaatgatagggtaatcatac 23826050  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||  ||    
T  23826049 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtgatttcagcat 23825951  T
Q  300 gtctgat 306  Q
    |||||||    
T  23825950 gtctgat 23825944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 3 - 312
Target Start/End: Complemental strand, 44432968 - 44432658
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  44432968 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgagattaggttttgattattgatttttga 44432869  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  44432868 atgaaaaagtatagaaaccatagaattgaatggtgaaaagagtggttaatcaagtaagttagtgatgggttaacgttttaatgatagtgtaatcatatgg 44432769  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||  |||||||||||||| ||| ||||||  ||||    
T  44432768 tgatgattatggatgattttggagagtttagggttaagaaatggagccaaggaggctcccatggtagaaaatcgcagaaaaatatgtgatttcagcatgt 44432669  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  44432668 ctgatgctgtc 44432658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 3 - 306
Target Start/End: Complemental strand, 3698710 - 3698406
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt-g 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||| ||||| |    
T  3698710 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtataaattggagaatttgggattaggttttgattattgattttttg 3698611  T
Q  102 aatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatg 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3698610 aatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatg 3698511  T
Q  201 gtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatg 300  Q
    || ||| ||||||||||||||||||||||||||||| |||  || ||||||||||| ||| |||||||  |||||||| ||||| ||||||||||  |||    
T  3698510 gtaatgattatggatgattttggagagtttagggttaagagatggagccaaggaggttccaatggtagaaaatcgcag-aaaatgtgtaatttcagcatg 3698412  T
Q  301 tctgat 306  Q
    ||||||    
T  3698411 tctgat 3698406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 72 - 312
Target Start/End: Complemental strand, 364827 - 364586
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  364827 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatgga 364728  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||      
T  364727 ttaacgttttaatgatagggtaatcatatcgtgatgattatggatgattttggagagtttagggttaagaaatggagccaaagaggctcccatggtagaa 364628  T
Q  271 aatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||| |||||||||||||||| ||| ||||| ||||| ||||    
T  364627 aatcacagaaaaatctgtaatatcagtatgtatgatgctgtc 364586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 42559543 - 42559783
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||     
T  42559543 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatataattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 42559642  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||  | ||  | |||||||||||||||||||||| |     
T  42559643 ttaacgtttcaatgatagggtaatcgtatggtgatgattatggatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggta-ga 42559741  T
Q  271 aatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||||||| |||  |||| ||||| ||||    
T  42559742 aatcgcagaaaaatctgtaatatcagcatgtatgatgctgtc 42559783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 21325852 - 21325974
Alignment:
Q  69 aatttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatg 168  Q
    |||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21325852 aattagggtttaggttttgaatattgatttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttggtgatg 21325951  T
Q  169 ggttaacgttttaattatagggt 191  Q
    | ||||| ||||||| |||||||    
T  21325952 gattaacattttaatgatagggt 21325974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 69 - 198
Target Start/End: Original strand, 21321254 - 21321383
Alignment:
Q  69 aatttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatg 168  Q
    |||| ||| |||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21321254 aattagggtttagattttgaatattgatttttgaatgaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatg 21321353  T
Q  169 ggttaacgttttaattatagggtaatcata 198  Q
    | ||||| ||||||| ||||||| ||||||    
T  21321354 gattaacattttaatgatagggtgatcata 21321383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 20494438 - 20494558
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||     
T  20494438 ttgggattaggttttaattattgatttttgaatgaaaaagtgtagaaactatagaattgaacggtgaaaagagtggttaatcatgtaggttagtgatgga 20494537  T
Q  171 ttaacgttttaattatagggt 191  Q
    ||||||||||||| |||||||    
T  20494538 ttaacgttttaatgatagggt 20494558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 26859364 - 26859513
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    |||||||||| |||| |||||||||||||| ||||| ||||||||| ||| |  ||   ||| |||| |||||| ||||||||||||||| ||| ||| |    
T  26859364 aaccatagaactgaacggtgaaaagagtggataatcgggtaggttaatgaagaattggtgttctaatgatagggaaatcatatggtgatgattagggacg 26859463  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggt 266  Q
    ||||||| |||||||||||  ||||  | ||| |||||||||||||||||    
T  26859464 attttggtgagtttagggtccagaaacggagcaaaggaggctcccatggt 26859513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 25623817 - 25623871
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25623817 tttactttcaatagtatagattgtaattctgattttggtttaacatgtttttggt 25623871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 21299329 - 21299415
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  21299329 tttactttcaatagtatggattataattctgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 21299415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 8413838 - 8413889
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8413838 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 8413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 11775676 - 11775625
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  11775676 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 11775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 20011270 - 20011356
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |  ||||||||||||||| | |||||||| |  ||||||||||    
T  20011270 tttactctcaatagtatagattataattctgattttggtttaacttagttctggtagaaattg-ggaatttgggttagggttttgatt 20011356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 10607898 - 10607810
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttga-tttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||| |  ||||||||||||||  ||| || |||  ||||||||||||    
T  10607898 tttactttcaatagtatggattataattctgattttgagtttaacctagttctggtagaaattcggaatttggggtctaggttttgatt 10607810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33089899 - 33089840
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaa 62  Q
    ||||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||    
T  33089899 tttactttcaata-tgtagattataattctgattttggatttaacatgtttctggtagaaa 33089840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 14397000 - 14397051
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  14397000 ttgggattaggttttgattattgattttttaattgaaaagtgtagaaaccat 14397051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 19882910 - 19882859
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  19882910 ttgggattaggttttaattattgatttttgaattgaaaagtgtagaaaccat 19882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 22520976 - 22521008
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    |||||||||||||||||||||||||||||||||    
T  22520976 tatagattgtaattctgattttgatttaacatg 22521008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 20387449 - 20387399
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaat-gaaaagtgtagaaaccat 122  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  20387449 ttgggattaggttttg-ttattgatttttgaattgaaaagtgtagaaaccat 20387399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 25483535 - 25483582
Alignment:
Q  76 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  25483535 gattatgttttgattattgatttttgaattgaaaagtgtagaaaccat 25483582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 15268207 - 15268175
Alignment:
Q  17 tatagattgtaattctgattttgatttaacatg 49  Q
    |||||||| ||||||||||||||||||||||||    
T  15268207 tatagattataattctgattttgatttaacatg 15268175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 15635191 - 15635235
Alignment:
Q  78 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  15635191 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 15635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 247; Significance: 1e-137; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 46047 - 46329
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46047 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 46146  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  46147 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 46246  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  46247 ggtgatgtttatggatgattttggagagtttagggttgagaattggagccaaggaggttcccatggtagaaaatcgcagaaaa 46329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 51451 - 51733
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51451 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 51550  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  51551 gaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatac 51650  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  51651 ggtgatgtttatggatgattttggagagtttagggttgagaattggagccaaggaggttcccatggtagaaaatcgcagaaaa 51733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 91756 - 91810
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||  |||||||    
T  91756 tttactttcaatagtatagattgtaattctgattttcgtttaacatagttctggt 91810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 43242527 - 43242836
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  43242527 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttga 43242626  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  43242627 atgaaaaagtgtagaaaccatataattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagagtaatcatatgg 43242726  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  43242727 tgatgattatggatgattttggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgt 43242825  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  43242826 ctgatgctgtc 43242836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 1856496 - 1856777
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1856496 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt- 1856594  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1856595 gaatgaaaaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatat 1856694  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||||||||  ||||||||||||    
T  1856695 ggtgatgtttatggatgattttggagagtttagggttgagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 1856777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 21674466 - 21674747
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21674466 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt- 21674564  T
Q  101 gaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatat 199  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21674565 gaatgaaaaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatat 21674664  T
Q  200 ggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa 282  Q
    ||||||||||||||||||||||||||||||||||||  |||  || ||||||||||| |||||||||||  ||||||||||||    
T  21674665 ggtgatgtttatggatgattttggagagtttagggtaaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 21674747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 291
Target Start/End: Original strand, 22757834 - 22758124
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt-g 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  22757834 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgaaaaatttgggattaggttttgattattgattttttg 22757933  T
Q  102 aatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatg 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  22757934 aatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaagttagtgatgggttaacgttttaatgatagggtaatcatagg 22758033  T
Q  201 gtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaat 291  Q
    |||||| |||||||||||||||||||||| |||||| |||  || ||||||||||| |||||||||||  |||||||||||||||||||||    
T  22758034 gtgatgattatggatgattttggagagttgagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaaatctgtaat 22758124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 72 - 312
Target Start/End: Complemental strand, 36461007 - 36460767
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggt 171  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||| |    
T  36461007 ttgggattaggttttgattattgacttttgaatgaaaagtgtagaaaccatataatggaacggtgaaaagagtggttaatcgggtaggttagtgatggat 36460908  T
Q  172 taacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggca 271  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||  | || ||||||||||||||||||||  |    
T  36460907 taacgtttcaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggttaaaaaacggagtcaaggaggctcccatggtagaaa 36460808  T
Q  272 atcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||| |||  |||| ||||| ||||    
T  36460807 atcgcagaaaaatctgtaatatcagcatgtatgatgctgtc 36460767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 21554460 - 21554655
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |    
T  21554460 aaccatagaattgaaaggtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggacg 21554559  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||| ||  ||||    |||||||||||||||||||||||  |||||||||||||||||| ||||||  |||| ||||| ||||    
T  21554560 attttggagagtttagagtcaagaaacagagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtgatttcagcatgtatgatgctgtc 21554655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 21557105 - 21557300
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||| || |||||||||| |||||||||||||||||||||| ||||||| |    
T  21557105 aaccatagaattgaacggtgaaaagagtgtttaatcaggtagggtagtgatggattgacgttttaatgatagggtaatcatatggtgatgattatggacg 21557204  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||||||||  |||||||||||||||||| ||||||  |||| ||||| ||||    
T  21557205 attttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtgatttcagcatgtatgatgctgtc 21557300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 24830059 - 24830254
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||| || |||| ||| |||| |||||||||||||||||||||| ||||||| |    
T  24830059 aaccatataattgaacgttgaaaagagtggttaatcaggtaggttagtgagggattaatgttctaatgatagggtaatcatatggtgatgattatggacg 24830158  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||| ||||||||  ||||  | |||||||||||||||||||||||  ||| |||||||||||| | ||||||  |||||||||| ||||    
T  24830159 attttggagattttagggtcaagaaacggagccaaggaggctcccatggtagaaaattgcagaaaaatctatgatttcagcatgtctgatgctgtc 24830254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 18819895 - 18819804
Alignment:
Q  9 ttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt-attggtttttg 101  Q
    |||||| || |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||  || |||| |||||||| |||||||||||    
T  18819895 ttcaatggtgtagattgtaattctgaatttggtttaacatgtttctggtagaaattgggaaatt--gggttagattttgattcattggtttttg 18819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 21495887 - 21495825
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||    
T  21495887 tttactttcaatagtatagattgtaattctgattttggtttaaccggtttatggtagaaattg 21495825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 10036138 - 10036074
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgag 67  Q
    |||||||||| || | ||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  10036138 tttactttcagtaatgtagattgtaattctgattttggtttaacaggtttatggtagaaattgag 10036074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 18419414 - 18419363
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18419414 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 18419363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 27868664 - 27868715
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27868664 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 27868715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 33472653 - 33472704
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  33472653 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 33472704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 19077399 - 19077363
Alignment:
Q  107 aaagtgtagaaaccatagaattgaatggtgaaaagag 143  Q
    |||||||||||||||||||||||||||||||||||||    
T  19077399 aaagtgtagaaaccatagaattgaatggtgaaaagag 19077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19077499 - 19077459
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgattt 43  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  19077499 tttactctcaatagtatagattataattctgattttgattt 19077459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 21553477 - 21553528
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  21553477 ttgggtttaggttttgatcattgatttttgaattgaaaagtgtagaaaccat 21553528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 21901015 - 21901098
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttg 87  Q
    ||||||||||||| | |||| || |||| |||||||||||||||||  ||||||  |||| |  |||||||||| ||||||||||    
T  21901015 tttactttcaataatgtagaatgaaattttgattttgatttaacatagttctggatgaaaattggaaatttggg-ttaggttttg 21901098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 43242881 - 43242913
Alignment:
Q  280 aaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||||||||||| ||||    
T  43242881 aaaatctgtaatttcaatatgtctgatgttgtc 43242913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 3 - 312
Target Start/End: Complemental strand, 7430629 - 7430320
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||    
T  7430629 tttactttcaatagtatagattgtaatcctgattttgatttaacatgtttctggtagaaattgggaaatttgtgattaagttttgattattgatttttga 7430530  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7430529 atgaaaaagtgtagaaaccatagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatgg 7430430  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||  |||||||| |||||||||| ||||| |||||    
T  7430429 tgatgattatggatgattttggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtactttcagtatgt 7430331  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  7430330 ctgatgctgtc 7430320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 3 - 307
Target Start/End: Original strand, 14593648 - 14593953
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  14593648 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaagttttgattattgatttttga 14593747  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14593748 atgaaaaagtgtagaaaccatataattgaatggtgtaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatgg 14593847  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgt-aatttcaatatg 300  Q
    ||||| ||||||||||||||||||||||||||||| |||| || ||||||||||| |||||||||||  |||||||| ||||||||| ||||||| ||||    
T  14593848 tgatgattatggatgattttggagagtttagggttaagaaatggagccaaggaggttcccatggtagaaaatcgcag-aaaatctgtaaatttcagtatg 14593946  T
Q  301 tctgatg 307  Q
    | |||||    
T  14593947 tttgatg 14593953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 8759463 - 8759773
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  8759463 tttactttcaatagtatagattgaaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttga 8759562  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8759563 atgaaaaagtgtagaaaccatataattgaatggtgaaaagagtggttaatcaggtatgttagtgatgggttaacgttttaatgatagggtaatcatatgg 8759662  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||  ||||||||||||||||||||||| | ||  | |||||||||||||||||||||||  |||||||||||||| ||| ||||||  ||||    
T  8759663 tgatgattatcaatgattttggagagtttagggttaacaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatatgtgatttcagcatgt 8759762  T
Q  302 ctgatgatgtc 312  Q
    |||||| ||||    
T  8759763 ctgatgctgtc 8759773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 50 - 312
Target Start/End: Original strand, 8767257 - 8767519
Alignment:
Q  50 tttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggtt 148  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8767257 tttctagtagaaattgggaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggtt 8767356  T
Q  149 aatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagc 248  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||  | |||    
T  8767357 aatcaggtatgttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggttaagaaacggagc 8767456  T
Q  249 caaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  8767457 caaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatgctgtc 8767519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 72 - 312
Target Start/End: Complemental strand, 1254795 - 1254554
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  1254795 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 1254696  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    |||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||  | ||||||||| |||||||||||||      
T  1254695 ttaatgtttcaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaaaaaacggagccaaggatgctcccatggtagaa 1254596  T
Q  271 aatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||||||| |||  |||| ||||| ||||    
T  1254595 aatcgcagaaaaatctgtaatatcagcatgtatgatgctgtc 1254554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 34296281 - 34296523
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  34296281 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 34296380  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggt-tgagaattgaagccaaggaggctcccatggtagg 269  Q
    ||||| ||| ||| |||||||||||||||||| | | ||||||||||||||||||| |||| |||   | ||  | |||||||||||||||||||||||     
T  34296381 ttaacatttcaatgatagggtaatcatatggtaaggattatggatgattttggagaatttaaggtcaaaaaaacgcagccaaggaggctcccatggtaga 34296480  T
Q  270 caatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
     ||||||||||||||||||||| |||  |||| ||||| ||||    
T  34296481 aaatcgcagaaaaatctgtaatatcagcatgtatgatgctgtc 34296523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 307
Target Start/End: Complemental strand, 1316 - 1090
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||     
T  1316 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtagcttagtgatgga 1217  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||||||| ||||||||||||||||||          ||||||| |||||||||||||||  | ||  | |||||||||| ||||||||||||      
T  1216 ttaacgttttaatgatagggtaatcatatggt----------gatgattatggagagtttagggtcaaaaaacggagccaaggagactcccatggtagaa 1127  T
Q  271 aatcgcagaaaaatctgtaatttcaatatgtctgatg 307  Q
    ||||| ||||||||||||||| |||| |||| |||||    
T  1126 aatcgtagaaaaatctgtaatatcaacatgtatgatg 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 34140687 - 34140883
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||| || |||||||| |||| |||||||||||||||||||||  ||||||| |    
T  34140687 aaccatagaattgaacggtgaaatgagtggttaattaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgataattatggacg 34140786  T
Q  217 attttggagagtttaggg-ttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||| |  ||||  | |||||||||||||||||||||||  ||||||| |||||| ||| ||||||  |||| ||||| ||||    
T  34140787 attttggagagtttagggctcaagaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaatatgtgatttcagcatgtatgatgctgtc 34140883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 34153303 - 34153499
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||| || |||||||| |||| |||||||||||||||||||||  ||||||| |    
T  34153303 aaccatagaattgaacggtgaaatgagtggttaattaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgataattatggacg 34153402  T
Q  217 attttggagagtttaggg-ttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||| |  ||||  | |||||||||||||||||||||||  ||||||| |||||| ||| ||||||  |||| ||||| ||||    
T  34153403 attttggagagtttagggctcaagaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaatatgtgatttcagcatgtatgatgctgtc 34153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 8275 - 8188
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtag 158  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  8275 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtag 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 7680748 - 7680836
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgat 205  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| || |||| ||| |||| |||||||||||||||||||||    
T  7680748 aaccatagaattgaacagtgaaaagagtggttaatcaggtaggttagtgagggattaatgttctaatgatagggtaatcatatggtgat 7680836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 14725371 - 14725285
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  14725371 tttactttcaatagtatggattttaattctgattttggtttaacctagttctggtagaaattgtg-aatttgggtctaggttttgatt 14725285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 13765309 - 13765258
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13765309 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 23225947 - 23225998
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23225947 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23225998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 23956825 - 23956774
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23956825 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23956774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 23415867 - 23415816
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  23415867 ttgggattaggttttgattattgatttttgaattgaaaagcgtagaaaccat 23415816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 27557625 - 27557575
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaacca 121  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  27557625 ttgggattatgttttgattattgatttttgaattgaaaagtgtagaaacca 27557575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 8767224 - 8767259
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgatttt 38  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8767224 tttactttcaatagtatagattgaaattctgatttt 8767259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 14583949 - 14583915
Alignment:
Q  9 ttcaatagtatagattgtaattctgattttgattt 43  Q
    |||||||||||||||| ||||||||||||||||||    
T  14583949 ttcaatagtatagattataattctgattttgattt 14583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 1588700 - 1588655
Alignment:
Q  78 ttaggttttgattattggtttttgaat-gaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  1588700 ttaggttttgattatagatttttgaattgaaaagtgtagaaaccat 1588655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 18315137 - 18315194
Alignment:
Q  9 ttcaatagtatagattgt-aattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||| ||||||||||| | ||||||||||||| ||||||| |||| ||||||||||||    
T  18315137 ttcagtagtatagatttttaattctgattttggtttaacaggtttatggtagaaattg 18315194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 31021810 - 31021859
Alignment:
Q  72 ttgggattaggttttgattattg-gtttttgaa-tgaaaagtgtagaaac 119  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  31021810 ttgggattaggttttgattattgattttttgaattgaaaagtgtagaaac 31021859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 14583855 - 14583819
Alignment:
Q  107 aaagtgtagaaaccatagaattgaatggtgaaaagag 143  Q
    |||||||||||| |||| |||||||||||||||||||    
T  14583855 aaagtgtagaaatcataaaattgaatggtgaaaagag 14583819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 15816757 - 15816801
Alignment:
Q  78 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  15816757 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 15816801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 312
Target Start/End: Original strand, 9862 - 10172
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||    
T  9862 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctagtagaaattgggaaatttggaattaggttttgattattgatttttga 9961  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  9962 atgaaaaagtgtagaaaacatagaattgaacggtgaaaagagtggttgatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatgg 10061  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||    
T  10062 tgatgattatggatgattttggagagtttagggttaagaaatcgagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtaatatcagcatgt 10161  T
Q  302 ctgatgatgtc 312  Q
     ||||| ||||    
T  10162 atgatgctgtc 10172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 312
Target Start/End: Complemental strand, 3445 - 3135
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||    
T  3445 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctagtagaaattgggaaatttggaattaggttttgattattgatttttga 3346  T
Q  103 atgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatgg 201  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  3345 atgaaaaagtgtagaaaacatagaattgaacggtgaaaagagtggttgatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatgg 3246  T
Q  202 tgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgt 301  Q
    ||||| ||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||||    
T  3245 tgatgattatggatgattttggagagtttagggttaagaaatcgagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtaatatcagcatgt 3146  T
Q  302 ctgatgatgtc 312  Q
     ||||| ||||    
T  3145 atgatgctgtc 3135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 11201422 - 11201726
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttg 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||| ||||||    
T  11201422 tttactttcaatagtatagattgtaattctgattttggatttaacatgtttctggtagaaattggagaatttgggattaagttttgattattgatttttg 11201521  T
Q  102 aatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatg 200  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11201522 gatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatg 11201621  T
Q  201 gtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatg 300  Q
    |||||||||||||||||||||||||||||||||||| |||  || ||| ||||||| |||||||||||  |||||||| ||||||||| ||||||  |||    
T  11201622 gtgatgtttatggatgattttggagagtttagggttaagagatggagcaaaggaggttcccatggtagaaaatcgcag-aaaatctgtgatttcagcatg 11201720  T
Q  301 tctgat 306  Q
    ||||||    
T  11201721 tctgat 11201726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 306
Target Start/End: Original strand, 11208153 - 11208457
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttg-atttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttg 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||| ||||||    
T  11208153 tttactttcaatagtatagattgtaattctgattttggatttaacatgtttctggtagaaattggagaatttgggattaagttttgattattgatttttg 11208252  T
Q  102 aatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatg 200  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11208253 gatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatg 11208352  T
Q  201 gtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatg 300  Q
    |||||||||||||||||||||||||||||||||||| |||  || ||| ||||||| |||||||||||  |||||||| ||||||||| ||||||  |||    
T  11208353 gtgatgtttatggatgattttggagagtttagggttaagagatggagcaaaggaggttcccatggtagaaaatcgcag-aaaatctgtgatttcagcatg 11208451  T
Q  301 tctgat 306  Q
    ||||||    
T  11208452 tctgat 11208457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 56114850 - 56115091
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||     
T  56114850 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtggaaagagtggttaatcagttaggttagtgatgga 56114949  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||      
T  56114950 ttaacgttttaatgatagagtaatcatatggtgatgattatggatgattttggagagtttagggttaagaaatggagccaaggaggctcccatggtagaa 56115049  T
Q  271 aatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||||||| |||  |||| ||||| ||||    
T  56115050 aatcgcagaaaaatctgtaatatcagcatgtatgatgctgtc 56115091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 24046572 - 24046809
Alignment:
Q  76 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaa 174  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  24046572 gattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagagatggattaa 24046671  T
Q  175 cgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatc 274  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||    |||||||||||||||||||||||  ||||    
T  24046672 cgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaaatc 24046771  T
Q  275 gcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||| |||  |||| ||||| ||||    
T  24046772 gcagaaaaatctgtaatatcagcatgtatgatgctgtc 24046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 35461558 - 35461622
Alignment:
Q  3 tttactttcaatagtatagattgtaattctga-ttttgatttaacatgtttctggtagaaattga 66  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35461558 tttacttacaatagtatagattgtaattctgatttttgatttaacatgtttctggtagaaattga 35461622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 45005907 - 45005856
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  45005907 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 45005856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 14822367 - 14822309
Alignment:
Q  7 ctttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||| ||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  14822367 ctttcaatagtgtagattgtaattctgattttcgtttaacaggtttatggtagaaattg 14822309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 18230703 - 18230656
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaa 118  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  18230703 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaa 18230656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 28386206 - 28386155
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  28386206 ttgggattatgttttgattattgatttttgaattgaaaagtgtagaaaccat 28386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 16297938 - 16297972
Alignment:
Q  186 tagggtaatcatatggtgatgtttatggatgattt 220  Q
    |||||||||| ||||||||||||||||||||||||    
T  16297938 tagggtaatcttatggtgatgtttatggatgattt 16297972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 15747645 - 15747697
Alignment:
Q  70 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  15747645 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 15747697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 72 - 296
Target Start/End: Complemental strand, 7921 - 7696
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  7921 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatgga 7822  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||  | |||||||||||||||||||||||      
T  7821 ttaacgttttaatgatagggtaatcatatggtgatgattatggattattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaa 7722  T
Q  271 aatcgcagaaaaatctgtaatttcaa 296  Q
    ||||||||||||||||||||| ||||    
T  7721 aatcgcagaaaaatctgtaatatcaa 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 17293 - 17533
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggt 171  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |    
T  17293 ttgggattaggttttgattattgatttttgaatgaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagagatggat 17392  T
Q  172 taacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggca 271  Q
    ||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||  | |||||||||||||||||||||||  |    
T  17393 taaagttttaatgatagggtaatcatatggtgatgattatgaatgattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaa 17492  T
Q  272 atcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||| |||||| |||  |||| ||||| ||||    
T  17493 atcgcagaaaaatatgtaatatcagcatgtatgatgctgtc 17533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 76 - 291
Target Start/End: Original strand, 22197 - 22413
Alignment:
Q  76 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaa 174  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||    
T  22197 gattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaaaggtgaaaagagtggttaatcaggtaggatagagatggattaa 22296  T
Q  175 cgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatc 274  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||    ||||||||||||||||||||||   ||||    
T  22297 cgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaagaaacagagccaaggaggctcccatggtataaaatc 22396  T
Q  275 gcagaaaaatctgtaat 291  Q
    |||||||||||||||||    
T  22397 gcagaaaaatctgtaat 22413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 72 - 287
Target Start/End: Complemental strand, 1035 - 819
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggg 170  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  1035 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 936  T
Q  171 ttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggc 270  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||  | ||  | |||||||||||||||||||||||      
T  935 ttaacgtttcaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 836  T
Q  271 aatcgcagaaaaatctg 287  Q
    |||||||||||||||||    
T  835 aatcgcagaaaaatctg 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 49617 - 49439
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||||||||| ||||||| |    
T  49617 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 49518  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttca 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||    
T  49517 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaaatttgtgatttca 49439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 131; Significance: 6e-68; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 123643 - 123816
Alignment:
Q  138 aaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123643 aaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtta 123742  T
Q  238 agaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||  | |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  123743 agaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatgctgtc 123816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 143684 - 143581
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattgg-tttttg 101  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| |  | ||||| ||  |||||||||||| |||| ||||||    
T  143684 tttactttcaatagtatagattataattctgattttggtttaacatggttctggtagaaaattgggaatttaggtctaggttttgattcttggatttttg 143585  T
Q  102 aatg 105  Q
    ||||    
T  143584 aatg 143581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 36583 - 36502
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttt 85  Q
    |||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||    
T  36583 tttactctcattagtatagattataattctgattttggtttaacatgtttctggtagaaattg-ggaatttgggtttaggttt 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 116 - 312
Target Start/End: Complemental strand, 8948 - 8752
Alignment:
Q  116 aaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggat 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||| ||| |||||||||||||||||||||| |||||||     
T  8948 aaaccatagaattgaacggtgaaaagagtggttaatcaggtagggtagcgatggattaacgtttaaatgatagggtaatcatatggtgatgattatggac 8849  T
Q  216 gattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||||||||||||||||  ||||  | |||||||||||||||||| ||||  |||||||||||||||||| ||||||  |||| ||||||||||    
T  8848 gattttggagagtttagggtcaagaaacggagccaaggaggctcccatcgtagaaaatcgcagaaaaatctgtgatttcagcatgtatgatgatgtc 8752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 115; Significance: 2e-58; HSPs: 6)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 26925 - 26723
Alignment:
Q  110 gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgttt 209  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||| ||||| ||    
T  26925 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 26826  T
Q  210 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgat 309  Q
    ||||||||||||||||||||||||||  ||||    |||||||||||||| ||||||||  ||||||||||| ||||||||| |||  |||| ||||| |    
T  26825 atggatgattttggagagtttagggtcaagaaacagagccaaggaggctctcatggtagaaaatcgcagaaatatctgtaatatcagcatgtatgatgct 26726  T
Q  310 gtc 312  Q
    |||    
T  26725 gtc 26723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 28307 - 28105
Alignment:
Q  110 gtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgttt 209  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||| ||||| ||    
T  28307 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 28208  T
Q  210 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgat 309  Q
    ||||||||||||||||||||||||||  ||||    |||||||||||||| ||||||||  ||||||||||| ||||||||| |||  |||| ||||| |    
T  28207 atggatgattttggagagtttagggtcaagaaacagagccaaggaggctctcatggtagaaaatcgcagaaatatctgtaatatcagcatgtatgatgct 28108  T
Q  310 gtc 312  Q
    |||    
T  28107 gtc 28105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 14842 - 14646
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||| |    
T  14842 aaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 14743  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa-atctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||    |||||||||||||||||||||||  | |||||||||| |||||| ||||||  |||| ||||| ||||    
T  14742 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaattcgcagaaaatatctgtgatttcagcatgtatgatgctgtc 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 16862 - 16666
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||| |    
T  16862 aaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 16763  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa-atctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||    |||||||||||||||||||||||  | |||||||||| |||||| ||||||  |||| ||||| ||||    
T  16762 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaattcgcagaaaatatctgtgatttcagcatgtatgatgctgtc 16666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 139 - 312
Target Start/End: Complemental strand, 8189 - 8015
Alignment:
Q  139 aagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttga 238  Q
    ||||||| ||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |    
T  8189 aagagtgattaatcaggtaggttagtgatggattaacattctaatgatagggtaatcatatggtgatgattatggacgattttggagagtttagggtcaa 8090  T
Q  239 gaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa-atctgtaatttcaatatgtctgatgatgtc 312  Q
    |||    |||||||||||||||||||||||  |||||||||||| |||||| ||||||  |||| ||||| ||||    
T  8089 gaaacagagccaaggaggctcccatggtagaaaatcgcagaaaatatctgtgatttcagcatgtatgatgctgtc 8015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 139 - 312
Target Start/End: Complemental strand, 18860 - 18686
Alignment:
Q  139 aagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttga 238  Q
    ||||||| ||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |    
T  18860 aagagtgattaatcaggtaggttagtgatggattaacattctaatgatagggtaatcatatggtgatgattatggacgattttggagagtttagggtcaa 18761  T
Q  239 gaattgaagccaaggaggctcccatggtaggcaatcgcagaaaa-atctgtaatttcaatatgtctgatgatgtc 312  Q
    |||    |||||||||||||||||||||||  | |||||||||| |||||| ||||||  |||| ||||| ||||    
T  18760 gaaacagagccaaggaggctcccatggtagaaattcgcagaaaatatctgtgatttcagcatgtatgatgctgtc 18686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 10692 - 10496
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||||      
T  10692 aaccatagaatttaacggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggaca 10593  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcaga-aaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    |||||||||||||||||||  ||||  | |||||||||| ||||||||||||  ||||||||| ||||| ||| ||||||| |||| ||||| ||||    
T  10592 attttggagagtttagggtcaagaaacggagccaaggagactcccatggtagaaaatcgcagaaaaaatttgtgatttcaacatgtatgatgctgtc 10496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 2078 - 2140
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2078 tttactttcaatagtatagattgtaattctgattttggtttaacatgtttctggtagaaattg 2140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 26453 - 26391
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  26453 tttactttcaatagtatagtttgtaattctgattttggtttaacatgtttctggtagaaattg 26391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 5936 - 6034
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctgg-tagaaattgagaaatttgggattaggttttgattattggtttttg 101  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||| | |||||||| ||||||| ||||| || |||||||    
T  5936 tttactttcaatagtatagattgtaattttgattttggtttaacatgtttttggttagaaattg-ggaatttgggtttaggttatgattctttgtttttg 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 10 - 68
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaa 61  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10 tttaatttcaatagtatagattgtaattctgattttggtttaacatgtttctggtagaa 68  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13449 - 13385
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  13449 gatttgctttcaatagtgtagattgtaattctgattttgatttaacaggtttatggtagaaattg 13385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 27318 - 27255
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctgg-tagaaattg 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  27318 tttactttcaatagtatagattgtaattctgattttggtttaacatgtttttggttagaaattg 27255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 21862 - 21776
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    |||||| ||||||||||||||| |||||||||||||  ||||||||  |||||||||||||||||  ||||||| |||||||||||||    
T  21862 tttactctcaatagtatagattataattctgatttttgtttaacatagttctggtagaaattgag-gatttgggtttaggttttgatt 21776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 24016 - 23954
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||    
T  24016 tttactttcaatagtatagattaaaattctgattttggtttaacatgtttctggtaggaattg 23954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 2936 - 2850
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||| ||||| | ||||||||  ||||||| ||||    
T  2936 tttactttcaatagtatagattaaaattctgattttggtttaacatgtttatggtaggaattg-ggaatttgggtctaggtttagatt 2850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 71580 - 71506
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgg 75  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||  |||||| ||| |||||    
T  71580 gatttactttcaatagtatagattgtaattctgattttggtttaacatagttctggttaaaattgggaattttgg 71506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 80323 - 80386
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttga-tttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||    
T  80323 tttactttcaatagtatagattataattctgattttgagtttaacatagttctggtagaaattg 80386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 100045 - 100108
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttga-tttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  |||||||| ||||||    
T  100045 tttactttcaatagtatagattataattctgattttgagtttaacatagttctggtaaaaattg 100108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 928 - 982
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  928 tttactttcaatagtatagattataattctgattttggtttaacatgtttttggt 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 554 - 501
Alignment:
Q  4 ttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  554 ttactttcaatagtatagattataattctgattttggtttaacatgtttttggt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18842 - 18786
Alignment:
Q  1 gatttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    |||||||||||||| ||||||||| ||||||| |||||| |||||||||||| ||||    
T  18842 gatttactttcaattgtatagattataattcttattttggtttaacatgtttttggt 18786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 1102 - 1047
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccatagaa 126  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  1102 ttgggattaggttttgatttttgatttttgaattgaaaagtgtagaaaccatagaa 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 4310 - 4505
Alignment:
Q  117 aaccatagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaattatagggtaatcatatggtgatgtttatggatg 216  Q
    |||||||||||| || ||||||| | |||  ||||| ||| ||||| ||| |  |||  ||| |||| ||||| |||||||| ||||||| ||| ||| |    
T  4310 aaccatagaattaaacggtgaaaggggtgaataatccggttggttaatgaagaattacggttataatgataggttaatcatacggtgatgattagggacg 4409  T
Q  217 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtaggcaatcgcagaaaaatctgtaatttcaatatgtctgatgatgtc 312  Q
    ||||||| |||||||||||||| ||    |||||||||  ||| ||| || |  |||||||||||||||||| |||||   |||||||||| ||||    
T  4410 attttggtgagtttagggttgaaaaacatagccaaggaacctcgcatagtggaaaatcgcagaaaaatctgtgatttctgcatgtctgatgctgtc 4505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 7100 - 7151
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  7100 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 23808 - 23859
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23808 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 18556 - 18505
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18556 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 18505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 42634 - 42583
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42634 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 56370 - 56456
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  56370 tttactttcaatagtatggattataattatgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 56456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 39902 - 39953
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  39902 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 39953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 142263 - 142177
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  142263 tttactttcaatagtatggattataattatgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 142177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 169402 - 169351
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  169402 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 169351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 176755 - 176704
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  176755 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 176704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 448848 - 448897
Alignment:
Q  27 aattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    ||||||||||||||||||||| |||  |||||||||||| ||| ||||||    
T  448848 aattctgattttgatttaacaggttattggtagaaattgggaattttggg 448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 8384 - 8438
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggt 57  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||    
T  8384 tttactttcaatagtgtaggttgtaattctgattttgatttaacatagttctggt 8438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 2942 - 3000
Alignment:
Q  7 ctttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||| |||||| |||||||||||||| ||||||| |||| ||||||||||||    
T  2942 ctttcaatagtgtagattataattctgattttggtttaacaggtttatggtagaaattg 3000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 17342 - 17400
Alignment:
Q  7 ctttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||| ||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  17342 ctttcaatagtgtagattgtaattctgattttcgtttaacaggtttatggtagaaattg 17400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 124085 - 124130
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacat 48  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  124085 tttactttcaatagtgtagattgtaattctgattttggtttaacat 124130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 11505 - 11549
Alignment:
Q  78 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  11505 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 11549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 2087 - 2039
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaac 119  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  2087 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 3926 - 3875
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  3926 ttgggattaggttttggttattgatttttgaattgaaaagtgtagaaaccat 3875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 4569 - 4608
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  4569 taattctgattttgatttaacatgtttatggtagaaattg 4608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 19751 - 19790
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  19751 taattctgattttgatttaacatgtttatggtagaaattg 19790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 19389 - 19440
Alignment:
Q  72 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  19389 ttgggattaagttttgattattgatttttgaattgaaaagtgtagaaaccat 19440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 10057 - 10006
Alignment:
Q  72 ttgggattaggttttgattattggtttttga-atgaaaagtgtagaaaccat 122  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  10057 ttgggattaggttttgattattgatttttgagttgaaaagtgtagaaaccat 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 32100 - 32054
Alignment:
Q  77 attaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 122  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  32100 attaggttttgattattgatttttgaattgaaaagtgtagaaaccat 32054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 3238 - 3166
Alignment:
Q  27 aattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 100  Q
    ||||||||||||||||||||| |||  |||||||||||| ||| |||||| ||| | || ||||||||||||||    
T  3238 aattctgattttgatttaacaggttattggtagaaattgggaattttgggtttatg-ttggattattggttttt 3166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 206911 - 206960
Alignment:
Q  27 aattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||||||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  206911 aattctgattttgatttaacatgtttatggtaggaattgggaattttggg 206960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 429 - 497
Alignment:
Q  9 ttcaatagtatagat-tgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||| |||||||||| | |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  429 ttcagtagtatagatgtttaattctgattttggtttaacaggtttatggtagaaattgggaattttggg 497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 4195 - 4258
Alignment:
Q  3 tttactttcaatagtatagattgtaattctga-ttttgatttaacatgtttctggtagaaattg 65  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||| |  |||||||||||||||    
T  4195 tttactttcaatagtatggattttaattctgatttttggtttaacctagttctggtagaaattg 4258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 16433 - 16515
Alignment:
Q  3 tttactttcaatagtatagattgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggtttt 86  Q
    ||||||||||||||||| |||| ||||||| |||||| |||||  |  ||||||||||||||| | ||||||||  ||||||||    
T  16433 tttactttcaatagtatggattttaattcttattttggtttaagctagttctggtagaaattg-ggaatttgggtctaggtttt 16515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 21952 - 21991
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  21952 taattctgattttgatttaacaggtttatggtagaaattg 21991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 26149 - 26188
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26149 taattctgattttgatttaacaggtttatggtagaaattg 26188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 2374 - 2324
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 76  Q
    |||||||||||||| ||||||| |||| |||||||||||||| | ||||||    
T  2374 taattctgattttggtttaacaggtttatggtagaaattgaggattttggg 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 13807 - 13769
Alignment:
Q  26 taattctgattttgatttaacatgtttctggtagaaatt 64  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  13807 taattctgattttgatttaacaggtttatggtagaaatt 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12 - 69
Alignment:
Q  9 ttcaatagtatagattgt-aattctgattttgatttaacatgtttctggtagaaattg 65  Q
    |||| ||||||||||| | ||||||||||||| ||||||| |||| ||||||||||||    
T  12 ttcagtagtatagatttttaattctgattttggtttaacaggtttatggtagaaattg 69  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 1302 - 1258
Alignment:
Q  78 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 122  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  1302 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 1258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 6538 - 6451
Alignment:
Q  3 tttactttcaatagtatagattgtaa-ttctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 90  Q
    ||||||||||||||||| |||| ||| |||||| |||| |||||| |  ||||||||||||||| | ||||||||   |||||||||||    
T  6538 tttactttcaatagtatggattataaattctgaatttggtttaacctagttctggtagaaattg-ggaatttgggtcgaggttttgatt 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University