View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19050_high_60 (Length: 217)
Name: NF19050_high_60
Description: NF19050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19050_high_60 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8149838 - 8149644
Alignment:
| Q |
1 |
ctaagagcgtgcaaaatggtaagtaatgaatccaattctttctttttctcaaggcacattcctgggggtttacaaatacaaattccaaactcacactctt |
100 |
Q |
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| T |
8149838 |
ctaagagcgtgcaaaatggtaa----tgaatccaattctttctttttctcaaggcacattcctgggggtttacaaatacaaattacaaacacacactctt |
8149743 |
T |
|
| Q |
101 |
atgtagcaggtactagctagcaatagcatgcagctatagttgttaatgtaattttcttaacttacatttaagtcatgtgctaatgaatcattgtatatt |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
8149742 |
atgtagcaggtactagctagcaatagcatgcagctatagttgttaatgtaattttcttaacttacatttaagtcatgtgataatgaatcattgtatatt |
8149644 |
T |
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