View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19051_low_1 (Length: 679)

Name: NF19051_low_1
Description: NF19051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19051_low_1
NF19051_low_1
[»] chr5 (36 HSPs)
chr5 (178-253)||(29695012-29695087)
chr5 (443-532)||(36185910-36185999)
chr5 (170-240)||(23118053-23118123)
chr5 (175-252)||(8544979-8545056)
chr5 (178-251)||(11637563-11637636)
chr5 (187-248)||(37073762-37073823)
chr5 (180-251)||(39914900-39914970)
chr5 (178-252)||(40715939-40716013)
chr5 (178-251)||(5107236-5107309)
chr5 (610-659)||(36185765-36185814)
chr5 (187-244)||(41630110-41630167)
chr5 (180-251)||(26409252-26409323)
chr5 (175-253)||(17672289-17672367)
chr5 (8-58)||(18617437-18617487)
chr5 (186-252)||(20125032-20125096)
chr5 (3-37)||(22799759-22799793)
chr5 (203-253)||(26655486-26655536)
chr5 (203-253)||(26927071-26927121)
chr5 (179-224)||(8682412-8682457)
chr5 (2-59)||(17071220-17071277)
chr5 (2-59)||(19128766-19128823)
chr5 (2-59)||(19360474-19360531)
chr5 (178-251)||(32200438-32200511)
chr5 (191-252)||(37054259-37054320)
chr5 (175-228)||(39610355-39610408)
chr5 (175-252)||(40027754-40027831)
chr5 (191-252)||(41266396-41266457)
chr5 (1-37)||(1554080-1554116)
chr5 (200-252)||(3052298-3052350)
chr5 (173-241)||(5485178-5485246)
chr5 (175-215)||(11318223-11318263)
chr5 (180-252)||(11647196-11647268)
chr5 (181-253)||(11720894-11720965)
chr5 (176-252)||(13864339-13864415)
chr5 (204-244)||(20074575-20074615)
chr5 (3-35)||(31082743-31082775)
[»] chr6 (23 HSPs)
chr6 (440-530)||(21377354-21377444)
chr6 (179-252)||(8629686-8629759)
chr6 (191-252)||(24623307-24623368)
chr6 (178-253)||(5632131-5632206)
chr6 (176-251)||(32524411-32524486)
chr6 (179-252)||(4826288-4826361)
chr6 (176-253)||(10278448-10278525)
chr6 (191-252)||(12232172-12232233)
chr6 (179-243)||(404161-404225)
chr6 (604-660)||(21377537-21377593)
chr6 (175-227)||(28758815-28758867)
chr6 (179-218)||(2426719-2426758)
chr6 (186-253)||(2445304-2445371)
chr6 (175-218)||(4553730-4553773)
chr6 (205-252)||(15169955-15170002)
chr6 (205-252)||(15178727-15178774)
chr6 (178-241)||(19277571-19277634)
chr6 (178-252)||(788863-788937)
chr6 (179-249)||(29069481-29069551)
chr6 (187-252)||(8569715-8569780)
chr6 (178-251)||(16390426-16390499)
chr6 (186-227)||(24212554-24212595)
chr6 (5-57)||(19311828-19311880)
[»] chr7 (33 HSPs)
chr7 (178-253)||(35142138-35142213)
chr7 (178-252)||(7388029-7388103)
chr7 (181-252)||(21105603-21105674)
chr7 (203-253)||(42227794-42227844)
chr7 (1-58)||(25343237-25343294)
chr7 (176-224)||(21580811-21580859)
chr7 (181-253)||(23221392-23221464)
chr7 (8-59)||(15305245-15305296)
chr7 (181-224)||(26713112-26713154)
chr7 (186-253)||(40187625-40187692)
chr7 (175-253)||(7994873-7994951)
chr7 (203-253)||(27833390-27833440)
chr7 (179-241)||(39926539-39926601)
chr7 (187-253)||(45425459-45425525)
chr7 (186-252)||(48837872-48837938)
chr7 (175-252)||(429168-429245)
chr7 (203-248)||(7908615-7908660)
chr7 (186-227)||(8903657-8903698)
chr7 (175-252)||(24099226-24099302)
chr7 (179-252)||(28200375-28200448)
chr7 (203-252)||(30397091-30397140)
chr7 (175-252)||(32315217-32315294)
chr7 (1-37)||(1417626-1417662)
chr7 (178-214)||(8901368-8901404)
chr7 (196-252)||(18773746-18773802)
chr7 (194-242)||(21411532-21411579)
chr7 (178-250)||(24225973-24226045)
chr7 (178-218)||(26825421-26825461)
chr7 (180-236)||(34000261-34000317)
chr7 (1-37)||(38225973-38226009)
chr7 (2-58)||(40273557-40273613)
chr7 (178-218)||(42829258-42829298)
chr7 (174-246)||(44651598-44651670)
[»] chr3 (23 HSPs)
chr3 (178-252)||(7464481-7464555)
chr3 (180-253)||(7651185-7651258)
chr3 (175-252)||(47039421-47039498)
chr3 (196-252)||(48657807-48657863)
chr3 (180-228)||(22462311-22462359)
chr3 (178-252)||(7827505-7827579)
chr3 (178-252)||(7829893-7829967)
chr3 (187-229)||(25485481-25485523)
chr3 (191-253)||(48209200-48209262)
chr3 (199-253)||(52453246-52453300)
chr3 (2-59)||(27082773-27082830)
chr3 (178-251)||(34899094-34899167)
chr3 (1-58)||(46150727-46150784)
chr3 (178-243)||(46226077-46226141)
chr3 (2-59)||(48648200-48648257)
chr3 (2-59)||(48764474-48764531)
chr3 (186-251)||(52119381-52119446)
chr3 (186-218)||(9251421-9251453)
chr3 (180-252)||(10922298-10922370)
chr3 (178-218)||(32753825-32753865)
chr3 (181-253)||(38130948-38131020)
chr3 (186-218)||(43679811-43679843)
chr3 (2-54)||(48507031-48507083)
[»] chr2 (40 HSPs)
chr2 (176-252)||(31815877-31815953)
chr2 (175-218)||(1238156-1238199)
chr2 (181-253)||(31397778-31397850)
chr2 (186-253)||(5168568-5168635)
chr2 (186-253)||(9547398-9547465)
chr2 (203-252)||(4238781-4238830)
chr2 (175-236)||(9519720-9519781)
chr2 (179-248)||(40967365-40967434)
chr2 (176-252)||(20565065-20565141)
chr2 (181-253)||(29544627-29544699)
chr2 (205-252)||(24581007-24581054)
chr2 (186-253)||(25395431-25395498)
chr2 (180-243)||(28202296-28202359)
chr2 (181-252)||(36264469-36264540)
chr2 (178-252)||(2256968-2257042)
chr2 (1-59)||(9276327-9276385)
chr2 (1-59)||(9540328-9540386)
chr2 (178-252)||(14735883-14735957)
chr2 (180-218)||(20239342-20239380)
chr2 (178-252)||(20455888-20455962)
chr2 (178-252)||(27412826-27412900)
chr2 (178-252)||(29798507-29798581)
chr2 (186-252)||(29809331-29809397)
chr2 (178-252)||(31837926-31838000)
chr2 (176-218)||(34242817-34242859)
chr2 (1-59)||(38361064-38361122)
chr2 (178-244)||(40295456-40295522)
chr2 (178-236)||(44026605-44026663)
chr2 (1-58)||(1296377-1296434)
chr2 (2-59)||(18174668-18174725)
chr2 (187-252)||(27935062-27935127)
chr2 (175-252)||(30045447-30045524)
chr2 (175-252)||(30050610-30050687)
chr2 (175-252)||(30141654-30141731)
chr2 (180-241)||(37320518-37320579)
chr2 (187-252)||(39555426-39555490)
chr2 (175-215)||(7302168-7302208)
chr2 (1-37)||(22301867-22301903)
chr2 (2-58)||(22560566-22560622)
chr2 (178-218)||(27244654-27244694)
[»] chr4 (36 HSPs)
chr4 (181-252)||(19908692-19908763)
chr4 (203-247)||(36479013-36479057)
chr4 (610-661)||(19109652-19109703)
chr4 (186-252)||(37930837-37930903)
chr4 (178-236)||(39842018-39842076)
chr4 (178-252)||(42344608-42344682)
chr4 (176-241)||(6459925-6459990)
chr4 (1-53)||(1866346-1866398)
chr4 (178-218)||(13276126-13276166)
chr4 (187-243)||(41536928-41536984)
chr4 (178-246)||(51436602-51436670)
chr4 (178-218)||(56309324-56309364)
chr4 (175-238)||(874453-874516)
chr4 (178-249)||(14202472-14202543)
chr4 (175-218)||(17134119-17134162)
chr4 (181-252)||(30135140-30135211)
chr4 (205-252)||(34960147-34960194)
chr4 (178-249)||(35021460-35021531)
chr4 (178-253)||(43034331-43034406)
chr4 (178-252)||(24664981-24665055)
chr4 (180-218)||(29910460-29910498)
chr4 (186-252)||(48171886-48171952)
chr4 (186-236)||(56096209-56096259)
chr4 (179-252)||(35823374-35823446)
chr4 (186-251)||(41520959-41521024)
chr4 (191-252)||(46434750-46434811)
chr4 (179-224)||(49952587-49952632)
chr4 (175-252)||(54500563-54500640)
chr4 (195-252)||(54677239-54677296)
chr4 (180-244)||(7371546-7371610)
chr4 (173-253)||(9946419-9946499)
chr4 (178-218)||(12712042-12712082)
chr4 (176-224)||(14197449-14197497)
chr4 (203-243)||(29568608-29568648)
chr4 (187-243)||(34595935-34595991)
chr4 (2-54)||(56262480-56262532)
[»] chr1 (33 HSPs)
chr1 (181-252)||(33153870-33153941)
chr1 (178-249)||(37705122-37705193)
chr1 (180-252)||(10292935-10293007)
chr1 (178-249)||(2613719-2613790)
chr1 (178-253)||(27533240-27533315)
chr1 (175-253)||(3777712-3777790)
chr1 (196-250)||(13401612-13401666)
chr1 (175-252)||(14768800-14768878)
chr1 (186-252)||(41973260-41973326)
chr1 (178-251)||(3431327-3431400)
chr1 (187-252)||(22388165-22388230)
chr1 (178-218)||(2884472-2884512)
chr1 (186-246)||(18056712-18056772)
chr1 (179-250)||(12212293-12212364)
chr1 (178-253)||(17139506-17139581)
chr1 (178-229)||(30678826-30678877)
chr1 (3-58)||(50271783-50271838)
chr1 (175-253)||(21041338-21041416)
chr1 (187-217)||(28341187-28341217)
chr1 (186-252)||(29042542-29042608)
chr1 (175-252)||(15382809-15382886)
chr1 (179-252)||(16967184-16967257)
chr1 (191-252)||(17917128-17917189)
chr1 (178-215)||(18091200-18091237)
chr1 (2-58)||(13263515-13263571)
chr1 (178-218)||(16033474-16033514)
chr1 (178-218)||(18521244-18521284)
chr1 (2-58)||(25469085-25469141)
chr1 (180-252)||(32433085-32433157)
chr1 (181-253)||(36467014-36467086)
chr1 (196-252)||(41974776-41974832)
chr1 (169-253)||(49130217-49130300)
chr1 (178-218)||(49222813-49222853)
[»] chr8 (24 HSPs)
chr8 (178-251)||(21557430-21557503)
chr8 (181-251)||(23159441-23159511)
chr8 (178-251)||(11708983-11709056)
chr8 (173-253)||(6471503-6471583)
chr8 (176-252)||(12938917-12938993)
chr8 (179-227)||(13272537-13272585)
chr8 (186-242)||(18959154-18959210)
chr8 (180-252)||(34420852-34420924)
chr8 (179-230)||(3456833-3456884)
chr8 (178-253)||(13357430-13357505)
chr8 (178-252)||(9241012-9241086)
chr8 (180-242)||(16843523-16843585)
chr8 (2-60)||(26654376-26654434)
chr8 (179-253)||(30071505-30071579)
chr8 (179-252)||(3650518-3650591)
chr8 (178-243)||(10732774-10732839)
chr8 (175-252)||(12133527-12133604)
chr8 (175-252)||(18422443-18422520)
chr8 (186-251)||(26799189-26799254)
chr8 (7-59)||(3165125-3165177)
chr8 (178-218)||(8837917-8837957)
chr8 (186-246)||(24429804-24429864)
chr8 (2-58)||(31641509-31641565)
chr8 (204-252)||(44632175-44632223)
[»] scaffold0204 (1 HSPs)
scaffold0204 (181-239)||(16151-16209)
[»] scaffold0021 (1 HSPs)
scaffold0021 (181-253)||(161141-161213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (178-251)||(119566-119639)
[»] scaffold1160 (1 HSPs)
scaffold1160 (187-252)||(1702-1767)
[»] scaffold0017 (1 HSPs)
scaffold0017 (175-224)||(35946-35995)
[»] scaffold0016 (1 HSPs)
scaffold0016 (178-218)||(99034-99074)


Alignment Details
Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 29695012 - 29695087
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||| ||||| ||||| ||||||||||||||||    
T  29695012 ctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaaccccgaccaccacc 29695087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 443 - 532
Target Start/End: Complemental strand, 36185999 - 36185910
Alignment:
Q  443 attgaggtaataacaaacaacttttctcccagtgttcctgttactacaattaacggatatgtcaaattgaacgacaataatatctcttgt 532  Q
    ||||||||||||||||||||||||||||||| || || |||||||||  | ||  |||||||||||| |||| |||||||| ||||||||    
T  36185999 attgaggtaataacaaacaacttttctcccactgctcatgttactactgtcaatcgatatgtcaaatggaacaacaataatctctcttgt 36185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 23118123 - 23118053
Alignment:
Q  170 attaggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaac 240  Q
    |||| |||||||||| ||||||||| |||||| |||||||||||||||| ||||| ||| | |||||||||    
T  23118123 attatgttctcgtgagcttaactcagttgataaggacaatgcataatatatgtaaggtttggggttcgaac 23118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 8545056 - 8544979
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| || || || ||  |||||||| |||||||||||    
T  8545056 gttctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcgaactccgaccaccac 8544979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 11637636 - 11637563
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| ||||||||| ||| || ||||||||||||| || || || ||||| ||||||||||||||||||||    
T  11637636 ctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgaccacca 11637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 37073823 - 37073762
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgacca 248  Q
    |||||||||||| || |||| ||||||||||| ||||| ||||| |||||||||||||||||    
T  37073823 ttaactcaattggtatggactatgcataatatatgtaaggttcggggttcgaaccccgacca 37073762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 39914900 - 39914970
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||| ||||||||||||| || |||||||||||||||| || || || || ||||||||||||||||||||    
T  39914900 cgtgagcttaactcaattggtaaggacaatgcataatatatgcaaggtccg-ggttcgaaccccgaccacca 39914970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 40716013 - 40715939
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||| ||||||||||| |||||||||||||||| || || || || ||||| ||||||| |||||||    
T  40716013 ctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 5107309 - 5107236
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| ||||||||| ||| || | | |||||||||||| || || || |||||||||||||||||||||||    
T  5107309 ctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 36185814 - 36185765
Alignment:
Q  610 tttctggttttcttccaaactcaaatgatattatcctagctaaactttct 659  Q
    |||||| |||||||||||||||||| |||||||| |||||| ||||||||    
T  36185814 tttctgattttcttccaaactcaaacgatattatgctagctgaactttct 36185765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 41630167 - 41630110
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccg 244  Q
    |||||||||||||||||||||||||||||||| || || ||||| | ||| |||||||    
T  41630167 ttaactcaattgatagggacaatgcataatatatgcaaggttcgggattcaaaccccg 41630110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 26409252 - 26409323
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||| |||| |||| ||| || |||||||||||||||| ||||| || || ||||||||||||| ||||||    
T  26409252 cgtgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccgcccacca 26409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 17672367 - 17672289
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||| |||| |||| |||||| |||| ||||||||||| | ||| ||||| |||||||| | ||| |||||||    
T  17672367 gttctcgtgagcttagctcagttgataaggacgatgcataatatatataaggttcggggttcgaatctcgatcaccacc 17672289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 18617487 - 18617437
Alignment:
Q  8 gatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    ||||||||||||||||| |||||||||||| || | |||| ||||||||||    
T  18617487 gatttggtgtcaacgaattcattgacacctgatatcaacggatcctgactc 18617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 20125032 - 20125096
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||||| |||||||||||||||| || || ||||| ||||| ||| |||||||||||    
T  20125032 cttaactcaattgata-ggacaatgcataatatatgcaaggttcg-ggttcaaactccgaccaccac 20125096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 22799759 - 22799793
Alignment:
Q  3 gttaagatttggtgtcaacgaactcattgacacct 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  22799759 gttaagatttggtgtcaacgaattcattgacacct 22799793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 26655486 - 26655536
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||||||||| ||||| || || ||||||||||||| ||||||||    
T  26655486 ggacaatgcataatatatgtaaggtccggggttcgaaccccggccaccacc 26655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 26927071 - 26927121
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||||||||| ||||| || || ||||||||||||| ||||||||    
T  26927071 ggacaatgcataatatatgtaaggtccggggttcgaaccccggccaccacc 26927121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 8682457 - 8682412
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    |||||||||||||||| ||  ||||||||||||||||||| |||||    
T  8682457 tcgtgaccttaactcagttagtagggacaatgcataatatatgtaa 8682412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 17071277 - 17071220
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||| |||||||||||||||||| || ||||||||| |||| |||| ||||| |||||    
T  17071277 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactca 17071220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 19128823 - 19128766
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||||||||||||||||||||||  | |||||||||  ||| |||| |||||||||||    
T  19128823 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactca 19128766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 19360474 - 19360531
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||||| |||||||||||||||| || |||||||||  ||| |||| |||||||||||    
T  19360474 ggttaatatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactca 19360531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 32200511 - 32200438
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| |||| |||| |||| |||||||||||||||||| || || || || ||||| | ||||||||||||    
T  32200511 ctcgtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 37054320 - 37054259
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||| ||||||||||||||||||| | ||| ||||| ||||| ||| |||||||||||    
T  37054320 ctcagttggtagggacaatgcataatatatataaggttcggggttcaaactccgaccaccac 37054259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 39610408 - 39610355
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgtt 228  Q
    |||||||||| |||| |||| |||||| |||||||||||||||| || ||||||    
T  39610408 gttctcgtgagcttagctcagttgatatggacaatgcataatatatgcaatgtt 39610355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 40027831 - 40027754
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| ||||||||| |||  | |||||||||||||||| |||||  |||| |||| |||| |||| ||||||    
T  40027831 gttctcgtgagcttaactcagttggcatggacaatgcataatatatgtaaaattcggggtttgaactccgatcaccac 40027754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 41266396 - 41266457
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||| ||||||  |||||||| ||||| ||||| |||||  ||||||||||||||    
T  41266396 ctcaattgataaggacaaaacataatatatgtaaggttcggggttcacaccccgaccaccac 41266457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1554080 - 1554116
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacct 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  1554080 tggttaagatttggtgtcaacgaattcgttgacacct 1554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 3052298 - 3052350
Alignment:
Q  200 tagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||| ||||||| || || ||||||||||| |||| ||||||||||    
T  3052298 tagggacaatgtataatatatgcaaggttcgaggttcaaacctcgaccaccac 3052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 5485178 - 5485246
Alignment:
Q  173 aggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacc 241  Q
    |||| ||||||| |||| |||| ||| ||||||||||||||||||| || ||||| || ||||| ||||    
T  5485178 aggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaatgtccggggttctaacc 5485246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 11318263 - 11318223
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataa 215  Q
    |||||||||| |||||||||||||||| ||| |||||||||    
T  11318263 gttctcgtgagcttaactcaattgataaggataatgcataa 11318223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 11647196 - 11647268
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| ||||||||| ||| || |||||||||||||||| || || ||| | |||||||| || |||||||||    
T  11647196 cgtgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaatcctgaccaccac 11647268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 11720894 - 11720965
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||||||| ||| ||||||||||||||||||| || || | ||| ||||| ||||||| ||||||||    
T  11720894 gtgagcttaactcagttggtagggacaatgcataatatatgcaa-ggtcggggttcaaaccccggccaccacc 11720965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 13864339 - 13864415
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||| ||||||||| ||| || | ||||| |||||||| || || || || ||||| |||||||||||||||    
T  13864339 ttctcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 20074575 - 20074615
Alignment:
Q  204 gacaatgcataatatctgtaatgttcgaggttcgaaccccg 244  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  20074575 gacaatgcataatatatgtaatgtccgagtttcgaaccccg 20074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 31082743 - 31082775
Alignment:
Q  3 gttaagatttggtgtcaacgaactcattgacac 35  Q
    |||||||||||||||||||||| ||||||||||    
T  31082743 gttaagatttggtgtcaacgaattcattgacac 31082775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 440 - 530
Target Start/End: Original strand, 21377354 - 21377444
Alignment:
Q  440 tcaattgaggtaataacaaacaacttttctcccagtgttcctgttactacaattaacggatatgtcaaattgaacgacaataatatctctt 530  Q
    ||||||||||||||||||||||||||| |||||| || || ||||||| || ||||| |||||||||||| |||| |||||||| ||||||    
T  21377354 tcaattgaggtaataacaaacaactttactcccactgctcttgttactccagttaaccgatatgtcaaatggaacaacaataatctctctt 21377444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 8629759 - 8629686
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| ||||||||||||| || |||||||||||||||| || || ||||| ||||| |||| ||||||||||    
T  8629759 tcgtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttcaaacctcgaccaccac 8629686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 24623368 - 24623307
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| |||||| |||||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  24623368 ctcagttgatatggacaatgcataatatatgtaaggttcggggttcaaaccccgaccaccac 24623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 5632131 - 5632206
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| ||||||||||||| |||| |||||| ||||||| | |||  ||||  |||||||||||||||||||||    
T  5632131 ctcgtgagcttaactcaattggtaggaacaatgtataatatatataagattcggcgttcgaaccccgaccaccacc 5632206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 32524486 - 32524411
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| || || || |  ||||| |||||| |||||||    
T  32524486 ttctcgtgagcttaactcaattggtagggacaatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 4826288 - 4826361
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| ||||  ||||||| ||| ||||||||||||||| ||||| ||||||||||| ||| ||| |||||||    
T  4826288 tcgtgaacttagttcaattggtagagacaatgcataatatatgtaaggttcgaggttcaaactccggccaccac 4826361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 10278448 - 10278525
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| | |||||||||||||||| |||||||||||||||| || ||  |  || ||||||||||| |||||||||    
T  10278448 ttctcgtaaacttaactcaattgatatggacaatgcataatatatgcaagatctgaagttcgaaccccaaccaccacc 10278525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 12232233 - 12232172
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||||||||||||||||||||| || | |||  | |||||||||||||||||||||    
T  12232233 ctcagttgatagggacaatgcataatatatgcagtgtctggggttcgaaccccgaccaccac 12232172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 404161 - 404225
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    |||||| ||||||| | ||| || |||||||||||||||| || ||||| |||||||||||||||    
T  404161 tcgtgagcttaacttagttggtaaggacaatgcataatatatgcaatgtccgaggttcgaacccc 404225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 660
Target Start/End: Original strand, 21377537 - 21377593
Alignment:
Q  604 gcggggtttctggttttcttccaaactcaaatgatattatcctagctaaactttctg 660  Q
    ||||| |||||| |||||||||||||||| |||||||||| |||||| || ||||||    
T  21377537 gcgggttttctgattttcttccaaactcatatgatattatgctagctgaattttctg 21377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 28758867 - 28758815
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgt 227  Q
    |||||||||| |||||||||||| |||||||||| ||||||||| || |||||    
T  28758867 gttctcgtgagcttaactcaattaatagggacaaagcataatatatgcaatgt 28758815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 2426758 - 2426719
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  2426758 tcgtaaccttaactcaattgatagagacaatgcataatat 2426719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 2445304 - 2445371
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||| |||||| | |||||||||||||| |  ||  |||| ||||||||||||||||||||||    
T  2445304 cttaactcagttgatatgaacaatgcataatatatacaagattcggggttcgaaccccgaccaccacc 2445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 4553730 - 4553773
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||    
T  4553730 gttctcgtgaacttaactcaattgatacggacaatgcttaatat 4553773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 15169955 - 15170002
Alignment:
Q  205 acaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  15169955 acaatgcataatatatgtaaggttcggggttcaaaccccgaccaccac 15170002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 15178727 - 15178774
Alignment:
Q  205 acaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  15178727 acaatgcataatatatgtaaggttcggggttcaaaccccgaccaccac 15178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 19277571 - 19277634
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacc 241  Q
    ||||||| ||||||||| |||||||| ||||||||||||||  |||| ||||  ||||||||||    
T  19277571 ctcgtgaacttaactcagttgataggaacaatgcataatataggtaaggttcagggttcgaacc 19277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 788863 - 788937
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||| |||| ||| || |||||||||||||||| || || |||||  |||| |||||||||||||||    
T  788863 ctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 29069481 - 29069551
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccac 249  Q
    |||||| |||| |||| ||||||||||||||||||||||| || || ||  ||||||| ||||||| ||||    
T  29069481 tcgtgagcttagctcagttgatagggacaatgcataatatatgaaaagtctgaggttcaaaccccggccac 29069551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 8569715 - 8569780
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||| || |||||||||||||||| || || || || ||||| ||||||| |||||||    
T  8569715 ttaactcaattggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 16390426 - 16390499
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| |||| |||| ||| ||||||||||||||||||| ||||| || || ||||| |||| || ||||||    
T  16390426 ctcgtgagcttacctcagttggtagggacaatgcataatatatgtaaggtccggggttcaaacctcggccacca 16390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 24212595 - 24212554
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgt 227  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  24212595 cttaactcagttgatatggacaatgcataatatatgtaatgt 24212554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 19311828 - 19311880
Alignment:
Q  5 taagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgact 57  Q
    ||||||||||||||||||||  | |||||||||  ||| ||||||||||||||    
T  19311828 taagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgact 19311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 35142213 - 35142138
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| |||| |||| |||||| |||||||||||||||| || || ||| ||||||||||||||||||||||||    
T  35142213 ctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccacc 35142138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 7388103 - 7388029
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||| ||| | ||||||||||||||||| ||||| ||||| | ||| |||||||||||||||    
T  7388103 ctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgggattcaaaccccgaccaccac 7388029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 21105603 - 21105674
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| |||| |||| ||| || ||| |||||||||||| || || |||||||||||||||||||||||||||    
T  21105603 gtgagcttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaaccccgaccaccac 21105674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 42227844 - 42227794
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||||||||| ||||| ||||||||||| ||| ||||||||||||    
T  42227844 ggacaatgcataatatatgtaaggttcgaggttcaaactccgaccaccacc 42227794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25343237 - 25343294
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    ||||| |||||||||||||||||| ||||||||||||  ||| |||| ||||||||||    
T  25343237 tggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactc 25343294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 21580811 - 21580859
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    ||||||| | |||||||||||||||| |||||||||||||||| |||||    
T  21580811 ttctcgtaagcttaactcaattgatatggacaatgcataatatatgtaa 21580859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 23221392 - 23221464
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||||||| ||| ||| ||||||||||||||| ||||| ||||| ||||| ||| || |||||||||    
T  23221392 gtgagcttaactcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaactccaaccaccacc 23221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 15305245 - 15305296
Alignment:
Q  8 gatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    ||||||||||||||||| |||||||||||| |||| || | |||||||||||    
T  15305245 gatttggtgtcaacgaattcattgacacctgatgtcaatggatcctgactca 15305296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 26713154 - 26713112
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  26713154 gtgaccttaactcaattgata-ggacaatgcataatatatgtaa 26713112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 40187692 - 40187625
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||  | ||||| |||||||| |||||||    
T  40187692 cttaactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacaccacc 40187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 7994951 - 7994873
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||| | ||||||| ||| |||||||||  |||||||| ||||| ||  | ||||| ||||||||||||||||    
T  7994951 gttctcgtgagcataactcagttggtagggacaaaacataatatatgtaaggtctggggttcaaaccccgaccaccacc 7994873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 27833440 - 27833390
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||||||||| ||||| || || ||||| ||||||||||||||||    
T  27833440 ggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccacc 27833390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 39926601 - 39926539
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacc 241  Q
    |||||| |||| |||| |||||| |||||||||||||||| || |||||||| ||||| ||||    
T  39926601 tcgtgagcttagctcagttgataaggacaatgcataatatatgcaatgttcggggttcaaacc 39926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 45425459 - 45425525
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||| ||||||  ||||||||||||||| || || ||||| |||||||| |||| ||||||||    
T  45425459 ttaactcagttgataaagacaatgcataatatatgcaaggttcggggttcgaatcccggccaccacc 45425525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 48837872 - 48837938
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||| || ||| |||||||||||| || || ||| | ||||||||||||| |||||||    
T  48837872 cttaactcaattggtatggataatgcataatatatgcaaagtttggggttcgaaccccggccaccac 48837938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 429245 - 429168
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| ||||||||| |||||| ||| ||| |||||||| || || ||| |  || |||||||||||||||||    
T  429245 gttctcgtgagcttaactcagttgatatggataatacataatatatgcaaggtttggagtccgaaccccgaccaccac 429168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 7908615 - 7908660
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgacca 248  Q
    ||||||||||||| || ||||| ||||| |||||||||||||||||    
T  7908615 ggacaatgcataaaatatgtaaggttcggggttcgaaccccgacca 7908660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 8903698 - 8903657
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgt 227  Q
    |||||||||||||||| ||||||||||| |||| ||||||||    
T  8903698 cttaactcaattgataaggacaatgcatgatatatgtaatgt 8903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 24099302 - 24099226
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| || | |||||||||||   |||||||||||||| ||||| ||||| |||| ||| ||||||||||||    
T  24099302 gttctcgtgaactaagctcaattgatataaacaatgcataatatatgtaaggttcggggtttgaa-cccgaccaccac 24099226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28200448 - 28200375
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| ||||||||| ||| |||| ||||| |||||||| || ||  |||||||||| ||| |||||||||||    
T  28200448 tcgtgagcttaactcagttggtaggaacaatacataatatatgcaaaattcgaggttcaaactccgaccaccac 28200375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 30397091 - 30397140
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||| || ||||| ||||| |||| ||||||||||||||||    
T  30397091 ggacaatgcataaaatatgtaaggttcggggtttgaaccccgaccaccac 30397140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 32315217 - 32315294
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||| ||||||||| |||||| ||||| | |||||||| || || ||||  ||||||||||| |||||||||    
T  32315217 gttcacgtgagcttaactcagttgataaggacattacataatatatgcaaggttcagggttcgaaccctgaccaccac 32315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1417662 - 1417626
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacct 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  1417662 tggttaagatttggtgtcaacgaattcgttgacacct 1417626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 8901368 - 8901404
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcata 214  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  8901368 ctcgtgaacttaactcaattgatatggacaatgcata 8901404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 18773802 - 18773746
Alignment:
Q  196 ttgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| ||||||||||||| || ||||| || || ||||| |||||||||||||||    
T  18773802 ttgatatggacaatgcataaaatatgtaaggtccggggttcaaaccccgaccaccac 18773746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 21411532 - 21411579
Alignment:
Q  194 aattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccc 242  Q
    ||||| ||||||||||||||||||| ||||| ||||| |||||||||||    
T  21411532 aattggtagggacaatgcataatatatgtaaagttcg-ggttcgaaccc 21411579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 24226045 - 24225973
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacc 250  Q
    ||||||| |||| |||| ||  || ||||||||||||| || ||||| || ||||||||||||| ||||||||    
T  24226045 ctcgtgaacttagctcagttcgtatggacaatgcataaaatatgtaaggtccgaggttcgaacctcgaccacc 24225973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 26825461 - 26825421
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| |||| ||||||||||| ||||||||||||||||    
T  26825461 ctcgtgagcttacctcaattgatatggacaatgcataatat 26825421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 34000261 - 34000317
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttc 236  Q
    ||||| ||||||||| |||||| ||| |||||||||||| ||||| ||||| |||||    
T  34000261 cgtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttc 34000317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38225973 - 38226009
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacct 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  38225973 tggttaagatttggtgtcaacgaattcgttgacacct 38226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40273613 - 40273557
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||| |||||||||||||||||| ||||||||||||  ||| |||| ||||| ||||    
T  40273613 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctaactc 40273557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 42829298 - 42829258
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||| ||||| |||||||||||||||||||||||    
T  42829298 ctcgtgagcttgactcagttgatagggacaatgcataatat 42829258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 44651598 - 44651670
Alignment:
Q  174 ggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgac 246  Q
    ||||||||||| | || |||||||||||  ||||||||||||||| || || |||||| |||| ||| |||||    
T  44651598 ggttctcgtgagcatagctcaattgataatgacaatgcataatatatgcaaggttcgaagttcaaactccgac 44651670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 7464555 - 7464481
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| ||||| || || ||||| |||||||||||||||    
T  7464555 ctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 7651185 - 7651258
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||| ||||||||| ||||||||||||||||||| ||| | ||| ||||| ||||| ||| ||||||||||||    
T  7651185 cgtgagcttaactcagttgatagggacaatgcatagtatatataaggttcggggttcaaacgccgaccaccacc 7651258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 47039421 - 47039498
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||| |||||||||  ||||| |||||||||||||||| || || ||||| |||||||| ||||||||||||    
T  47039421 gttcccgtgagcttaactcagatgataaggacaatgcataatatatgcaaagttcggggttcgaatcccgaccaccac 47039498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 48657863 - 48657807
Alignment:
Q  196 ttgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||| |||||||| |||||  |||| |||||||||||||||||||||    
T  48657863 ttgatagggacaatccataatatatgtaagattcggggttcgaaccccgaccaccac 48657807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 22462311 - 22462359
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgtt 228  Q
    ||||| ||||||||| |||||| |||||||||||||||| |||||||||    
T  22462311 cgtgagcttaactcagttgataaggacaatgcataatatatgtaatgtt 22462359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 7827505 - 7827579
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||  |||||||| |||||| |||||||||||||||| ||||| ||  |  ||||||| ||||||||||||    
T  7827505 ctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctggagttcgaaacccgaccaccac 7827579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 7829893 - 7829967
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||  |||||||| |||||| |||||||||||||||| ||||| ||  || |||||||  |||||||||||    
T  7829893 ctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctgaagttcgaaatccgaccaccac 7829967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 25485523 - 25485481
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttc 229  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  25485523 ttaactcaattgatatagacaatgcataatatatgtaatgttc 25485481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 48209262 - 48209200
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| |||||||||||||| |||||||| | ||| ||||  ||||| ||||||||||||||||    
T  48209262 ctcagttgatagggacaatacataatatatataaggttcagggttcaaaccccgaccaccacc 48209200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 52453300 - 52453246
Alignment:
Q  199 atagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||||||||||||| || || ||||||||||| |||| || ||||||||    
T  52453300 atagggacaatgcataatatatgcaaagttcgaggttcaaacctcgtccaccacc 52453246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 27082830 - 27082773
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    ||||| ||||||||||||||||| || |||||||||| ||| || | |||||||||||    
T  27082830 ggttaggatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactca 27082773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 34899094 - 34899167
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| |||| |||| ||  ||||||||||||||||||| || || || || ||||| ||||||||||||||    
T  34899094 ctcgtgatcttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46150727 - 46150784
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    ||||| ||||||||||||||||||  | |||||||||| ||| |||| ||||||||||    
T  46150727 tggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactc 46150784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 46226141 - 46226077
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    |||||||  |||||||||||| ||||||||||||||||||| || || || || ||||||||||||    
T  46226141 ctcgtgagtttaactcaattggtagggacaatgcataatatatgcaaggtccg-ggttcgaacccc 46226077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 48648257 - 48648200
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||||||||||||||||||||||  | |||||||||  ||| |||| |||||||||||    
T  48648257 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactca 48648200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 48764531 - 48764474
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||| |||||||||||||||||| || ||||||||| |||| || | |||||||||||    
T  48764531 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactca 48764474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 52119381 - 52119446
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    |||| |||| ||| || |||||||||||||||| || || ||||| ||||||||||||| ||||||    
T  52119381 cttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaaccccggccacca 52119446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 9251453 - 9251421
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatat 218  Q
    ||||||||||||| |||||||||||||||||||    
T  9251453 cttaactcaattggtagggacaatgcataatat 9251421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 10922370 - 10922298
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| ||||||||| ||| ||||||||||||||||||| || ||  | || ||||| ||||||||| |||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaagatccggggttcaaaccccgactaccac 10922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 32753825 - 32753865
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||| ||||| |||||||||||||||||||||||    
T  32753825 ctcgtgagcttgactcagttgatagggacaatgcataatat 32753865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 38131020 - 38130948
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||||||| ||| || |||||||||||||||| || || || || ||||| ||||||| ||||||||    
T  38131020 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 38130948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 43679811 - 43679843
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatat 218  Q
    |||||||||||||||| ||||||||||||||||    
T  43679811 cttaactcaattgataaggacaatgcataatat 43679843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 48507031 - 48507083
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctg 54  Q
    |||| |||||||||||||||||| ||||||||||||  ||| |||| ||||||    
T  48507031 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 48507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 31815953 - 31815877
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||| || || || || ||||| |||||||||||||||    
T  31815953 ttctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 1238156 - 1238199
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  1238156 gttctcgtgagcttaactcaattgatagggacaatgcataatat 1238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 31397850 - 31397778
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| |||| |||||||| |||||||||||||||| || ||||| || |||| ||||||||||| ||||||||    
T  31397850 gtgagcttagctcaattggtagggacaatgcataaaatatgtaaggtccgagattcgaaccccggccaccacc 31397778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 5168635 - 5168568
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||| |||||||||| |||||||||||| || || ||||| ||||| ||||||||| ||||||    
T  5168635 cttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaaaccccgactaccacc 5168568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 9547465 - 9547398
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||| |||||| |||||||||||||||| || || ||| | ||||| ||||||||||||||||    
T  9547465 cttaactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccacc 9547398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 4238781 - 4238830
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  4238781 ggacaatgcataatatatgtaaggttcggggttcgaactccgaccaccac 4238830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 9519781 - 9519720
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttc 236  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| || || |||||| ||||    
T  9519781 gttctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggttcgaagttc 9519720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 40967434 - 40967365
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgacca 248  Q
    |||||| ||||||||| |||||| |||||||||||||||| || || ||| ||||||| |||| ||||||    
T  40967434 tcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcgacca 40967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 20565141 - 20565065
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||| |||| |||| ||| ||||||||||||||||||| || || || || ||||| |||||| ||||||||    
T  20565141 ttctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 29544627 - 29544699
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| |||| |||||||| ||||||||||||||||||| || || || || ||||| ||||||| ||||||||    
T  29544627 gtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 29544699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 24581054 - 24581007
Alignment:
Q  205 acaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||| || || ||||||||||| |||||||||||||||    
T  24581054 acaatgcataatatatgcaaggttcgaggttcaaaccccgaccaccac 24581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 25395498 - 25395431
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||| ||| |||| |||||||||||||| || || |||| |||||| || |||||||||||||    
T  25395498 cttaactcagttggtaggaacaatgcataatatatgcaaggttcaaggttcaaatcccgaccaccacc 25395431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 28202296 - 28202359
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    ||||| |||| |||| ||||||||||||||||||||||| ||||| || ||| |||| ||||||    
T  28202296 cgtgagcttagctcagttgatagggacaatgcataatatatgtaaggtccgaagttcaaacccc 28202359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 36264540 - 36264469
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||| ||||||| || ||| |||||||||||| || || ||||| ||||| |||||||||||||||    
T  36264540 gtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaaaccccgaccaccac 36264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 2256968 - 2257042
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||| ||| || |||||||||||||||| || || ||  | ||||||||||||| |||||||    
T  2256968 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctggggttcgaaccccggccaccac 2257042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9276327 - 9276385
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    ||||| |||||||||||||||||| || |||||||||  ||| |||| |||||||||||    
T  9276327 tggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactca 9276385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9540386 - 9540328
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||||||||||||||||||||||| || |||||||||  ||| |||| |||||| ||||    
T  9540386 tggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctca 9540328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 14735957 - 14735883
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||| || ||||| || ||||||||||||| || ||||| ||||||||||| ||| ||| |||||||    
T  14735957 ctcgtgagcttagcttaattggtatggacaatgcataaaatatgtaaggttcgaggttcaaactccggccaccac 14735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 20239342 - 20239380
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  20239342 cgtgagcttaactcaattgatagggataatgcataatat 20239380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 20455888 - 20455962
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||| |||||||| || |||||||||||||||| || || || || |||||||| |||| |||||||    
T  20455888 ctcgtgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccaccac 20455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 27412900 - 27412826
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||| ||| ||| ||||||||||||||| ||||| ||  |  |||| |||||||||||||||    
T  27412900 ctcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccaccac 27412826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 29798581 - 29798507
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||| ||| || ||||||||||||| || | ||| ||  | |||||||||||||||||||||    
T  29798581 ctcgtgagcttaactcagttggtatggacaatgcataaaatatttaaggtcaggggttcgaaccccgaccaccac 29798507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 29809331 - 29809397
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||| ||| ||||||||||||||||||| || || || || |||||||| |||| |||||||    
T  29809331 cttaactcagttggtagggacaatgcataatatatgaaaggtacggggttcgaatcccggccaccac 29809397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 31838000 - 31837926
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||||||||||| || ||| |||| ||||||| ||||| ||||| | ||| |||| ||||||||||    
T  31838000 ctcgtgaacttaactcaattggtatggataatgtataatatatgtaaggttcgggattcaaacctcgaccaccac 31837926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 34242817 - 34242859
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||    
T  34242817 ttctcatgagcttagctcaattgatagggacaatgcataatat 34242859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38361122 - 38361064
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    ||||| |||||||||||||||||| || ||||||||| |||| |||| |||||| ||||    
T  38361122 tggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacgtatcctgtctca 38361064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 40295522 - 40295456
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccg 244  Q
    ||||||| |||||||||||||||| | |||||||||||| | || ||  |||||||||| |||||||    
T  40295522 ctcgtgaacttaactcaattgatatgaacaatgcataatgtatgcaagattcgaggttcaaaccccg 40295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 44026605 - 44026663
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttc 236  Q
    ||||||| ||||||||||||| || |||||| ||||||||| ||||| ||||| |||||    
T  44026605 ctcgtgagcttaactcaattggtatggacaacgcataatatatgtaaggttcggggttc 44026663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1296434 - 1296377
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    ||||| |||||||||||||||||| || |||||||||  ||| |||| ||||||||||    
T  1296434 tggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactc 1296377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 18174668 - 18174725
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    |||| |||||||||||||||||| || ||||||||| |||| |||| ||||| |||||    
T  18174668 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactca 18174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 27935062 - 27935127
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||| ||| ||||||||||||| ||||| || || || |||||||||||||||  |||||||    
T  27935062 ttaactcagttggtagggacaatgcagaatatatgcaaggtacgaggttcgaaccccagccaccac 27935127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 30045447 - 30045524
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| |||| |||| |||||||| ||||||||||||||||||| |  || ||||||| ||| |||| || |||||||    
T  30045447 gttctggtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccac 30045524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 30050610 - 30050687
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| |||| |||| |||||||| ||||||||||||||||||| |  || ||||||| ||| |||| || |||||||    
T  30050610 gttctggtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccac 30050687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 30141654 - 30141731
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| |||| |||| |||||||| ||||||||||||||||||| |  || ||||||| ||| |||| || |||||||    
T  30141654 gttctggtgaacttagctcaattggtagggacaatgcataatatatacaaggttcgagattcaaacctcggccaccac 30141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 37320579 - 37320518
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacc 241  Q
    ||||| ||||||||| ||| ||  ||||||||||||||| || || ||||||||||||||||    
T  37320579 cgtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttcgaacc 37320518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 39555426 - 39555490
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||||| ||| |||| ||||||| ||||  ||  |||||||||||||||||||||||    
T  39555426 ttaactcaattgataaggagaatg-ataatatatgtatggtatgaggttcgaaccccgaccaccac 39555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 7302208 - 7302168
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataa 215  Q
    |||||||||| |||| |||| ||||||||||||||||||||    
T  7302208 gttctcgtgaacttagctcagttgatagggacaatgcataa 7302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22301867 - 22301903
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacct 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  22301867 tggttaagatttggtgtcaacgaattcgttgacacct 22301903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 22560566 - 22560622
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||| ||||||||||||||||||  | ||||||||| |||| |||| ||||||||||    
T  22560566 ggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactc 22560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 27244654 - 27244694
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  27244654 ctcgtgagcttagctcagttgatagggacaatgcataatat 27244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 19908692 - 19908763
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||||||| ||| || |||||||||||||||| || || || ||||||||||||||||||||||||    
T  19908692 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 36479013 - 36479057
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaaccccgacc 247  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  36479013 ggacaatgcataatatatgtaaggttcgaggttcgaaccccgacc 36479057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 610 - 661
Target Start/End: Complemental strand, 19109703 - 19109652
Alignment:
Q  610 tttctggttttcttccaaactcaaatgatattatcctagctaaactttctgt 661  Q
    |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  19109703 tttctgattttcttccaaactccaatgatattatgctagctgaactttctgt 19109652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 37930903 - 37930837
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||| |||| |||||||||||||| || || ||  ||||||| |||||||||||||||    
T  37930903 cttaactcaattggtaggtacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccac 37930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 39842076 - 39842018
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttc 236  Q
    ||||||| ||||||||| |||||| |||||||||||||||| ||||| ||| |||||||    
T  39842076 ctcgtgatcttaactcagttgataaggacaatgcataatatatgtaaggtttgaggttc 39842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 42344682 - 42344608
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||||||||||| |||| |||||| ||||||| || || || |||||||| |||  ||||||||||    
T  42344682 ctcgtgaccttaactcaattggtaggaacaatgtataatatatgcaaggtccgaggttcaaacatcgaccaccac 42344608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 6459990 - 6459925
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacc 241  Q
    ||||||||| ||||||||| |||||| |||||||||||||||| ||||| || ||  |||||||||    
T  6459990 ttctcgtgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttcgaacc 6459925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1866398 - 1866346
Alignment:
Q  1 tggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcct 53  Q
    ||||| |||||||||||||||||| ||||||||||||| ||| |||| |||||    
T  1866398 tggttgagatttggtgtcaacgaattcattgacacctagtgtcaacggatcct 1866346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 13276126 - 13276166
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  13276126 ctcgtgagcttaactcaattggtagggacaatgcataatat 13276166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 41536928 - 41536984
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    ||||||||||||||| ||||||| |||||||| || || |||||| |||||||||||    
T  41536928 ttaactcaattgataaggacaatacataatatatgcaaggttcgaagttcgaacccc 41536984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 51436670 - 51436602
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgac 246  Q
    ||||||| ||||||||| |||||| | |||||||||||||| || || |||||  ||||||||||||||    
T  51436670 ctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggttcggagttcgaaccccgac 51436602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 56309364 - 56309324
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  56309364 ctcgtgagcttaactcaattgatatggacaatgcataatat 56309324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 874453 - 874516
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcga 238  Q
    |||||||||| ||||||| | |||||| |||||||||||||||| | ||| ||||| |||||||    
T  874453 gttctcgtgaacttaacttagttgatatggacaatgcataatatatataaggttcgtggttcga 874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 14202543 - 14202472
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccac 249  Q
    ||||||| ||||||||| |||||  ||| |||||||||||| ||||| || || ||||| ||||||||||||    
T  14202543 ctcgtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaaaccccgaccac 14202472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 17134119 - 17134162
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||    
T  17134119 gttctcgtgagcttaactcaattggtagagacaatgcataatat 17134162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 30135140 - 30135211
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||||||| |||||| ||| |||||||||||| ||| |  | |||||||| |||||||||||||||    
T  30135140 gtgagcttaactcagttgataaggataatgcataatatatgtcagatccgaggttcaaaccccgaccaccac 30135211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 34960194 - 34960147
Alignment:
Q  205 acaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||||||| | |||  ||||||||||||||||||||||||||    
T  34960194 acaatgcataatatatataagattcgaggttcgaaccccgaccaccac 34960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 35021531 - 35021460
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccac 249  Q
    ||||||| |||| |||| |||||| ||||||| ||||| || || || ||||| ||||||||||||||||||    
T  35021531 ctcgtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggttcgaaccccgaccac 35021460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 43034406 - 43034331
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| ||||||||| ||| || |||||||||||||||| || || ||  ||||||| ||||||| ||||||||    
T  43034406 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccacc 43034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 24665055 - 24664981
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||| |||| ||| || ||| |||||||||||| || || || || |||||||||||||||||||||    
T  24665055 ctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 29910460 - 29910498
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  29910460 cgtgagcttaactcaattgataaggacaatgcataatat 29910498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 48171886 - 48171952
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||| ||| ||| ||||||| ||||||| || || |||| |||||| |||||||||||||||    
T  48171886 cttaactcagttggtagagacaatgtataatatatgcaaggttctaggttcaaaccccgaccaccac 48171952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 56096209 - 56096259
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttc 236  Q
    ||||||||| |||||| |||||||||||||||| ||||| ||||| |||||    
T  56096209 cttaactcagttgataaggacaatgcataatatatgtaaggttcgtggttc 56096259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 35823374 - 35823446
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| |||||||||||||||| |||||| ||||||||| || || |||  |||||| ||| |||||||||||    
T  35823374 tcgtgaacttaactcaattgatatggacaaggcataatatatgcaaggtttaaggttc-aacaccgaccaccac 35823446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 41520959 - 41521024
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||||| ||| ||| ||||||||||||||| || || |||| |||||| ||| ||||||||||    
T  41520959 cttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaactccgaccacca 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 46434811 - 46434750
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| |||||| |||||||||||||||| ||||| ||| ||||||| ||| |||| ||||||    
T  46434811 ctcagttgataaggacaatgcataatatatgtaaggtttgaggttcaaactccgatcaccac 46434750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 49952632 - 49952587
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||    
T  49952632 tcgtgagcttaactcaattgatttggacaatgcataatatatgtaa 49952587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 54500563 - 54500640
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| |||| |||| ||| ||| ||||||||||||||| ||||| || || ||||| ||| | |||||||||    
T  54500563 gttctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaacactgaccaccac 54500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 54677239 - 54677296
Alignment:
Q  195 attgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| |||||||||||||||| ||||| ||||||| ||| ||| ||| |||||||    
T  54677239 attgatatggacaatgcataatatatgtaaggttcgagattcaaactccggccaccac 54677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 7371610 - 7371546
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccg 244  Q
    ||||| ||||||||| |||||| ||||||| |||||||| || || || || |||||||||||||    
T  7371610 cgtgagcttaactcagttgataaggacaatacataatatatgcaaggtccggggttcgaaccccg 7371546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 9946419 - 9946499
Alignment:
Q  173 aggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||||| |||| |||| ||| || ||||||||||||| || || || || || ||||| ||||||||||||||||    
T  9946419 aggtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccacc 9946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 12712082 - 12712042
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||||||||| ||||||| |||||||||||||||    
T  12712082 ctcgtgaacttaactcatttgatagagacaatgcataatat 12712042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 14197497 - 14197449
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    ||||||| | ||||||||| ||| ||||||||||||||||||| |||||    
T  14197497 ttctcgtaagcttaactcagttggtagggacaatgcataatatatgtaa 14197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 29568608 - 29568648
Alignment:
Q  203 ggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    |||||||||||||||| ||||| || |||||||||||||||    
T  29568608 ggacaatgcataatatatgtaaggtccgaggttcgaacccc 29568648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 34595991 - 34595935
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    |||||||| ||| || |||||||||||||||| ||||| ||||| |||| |||||||    
T  34595991 ttaactcagttggtaaggacaatgcataatatatgtaaagttcggggtttgaacccc 34595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 56262532 - 56262480
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctg 54  Q
    |||| |||||||||||||||||| ||||||||||||  ||| |||| ||||||    
T  56262532 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 56262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 33153941 - 33153870
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  33153941 gtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 37705122 - 37705193
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccac 249  Q
    ||||||| |||||||||| || || |||||||||||||||| || |||||| ||||||||||||| ||||||    
T  37705122 ctcgtgaacttaactcaactggtatggacaatgcataatatatgcaatgtttgaggttcgaaccctgaccac 37705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 10292935 - 10293007
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||| |  || ||||  |||||||||||||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatatatgtaagggacggggtttaaaccccgaccaccac 10293007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 2613719 - 2613790
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccac 249  Q
    ||||||| |||| |||| ||| || ||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  2613719 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaaccccgaccac 2613790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 27533240 - 27533315
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| ||||  ||| ||| ||||||||||||||||||| || || ||||| ||||| ||||||||||||||||    
T  27533240 ctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccacc 27533315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 3777712 - 3777790
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||||||| ||||||||| |||||| ||| |||| ||||||| |  || ||||||||||| |||| |||||||||||    
T  3777712 gttctcgtgagcttaactcagttgatatggataatgtataatatatacaaggttcgaggttcaaacctcgaccaccacc 3777790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 13401612 - 13401666
Alignment:
Q  196 ttgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacc 250  Q
    ||||||| ||||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  13401612 ttgatagagacaatgcataatatatgtaaggttcggggttcaaaccccgaccacc 13401666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 14768800 - 14768878
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatg-ttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| ||| ||||| ||| ||||||||||| ||||||| ||||| | |||| ||||| |||||||||||||||    
T  14768800 gttctcgtgagcttgactcagttggtagggacaatgtataatatatgtaaagtttcggggttcaaaccccgaccaccac 14768878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 41973260 - 41973326
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||| ||||||||||||||||||| || || || || ||||||||||||| |||||||    
T  41973260 cttaacttaattggtagggacaatgcataatatatgcaaggtccggggttcgaaccccggccaccac 41973326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 3431327 - 3431400
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    |||||||  |||||||| ||| |||| | |||||||||||| || ||||| |||||||| ||||||||||||||    
T  3431327 ctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccacca 3431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 22388230 - 22388165
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| | ||||||||||||||||||||||| ||||| ||||||| ||| ||| || ||||||||    
T  22388230 ttaacttagttgatagggacaatgcataatatatgtaacgttcgagattcaaactccaaccaccac 22388165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 2884512 - 2884472
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  2884512 ctcgtgaccttaactcagttgatatggacaatgcataatat 2884472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 18056772 - 18056712
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgac 246  Q
    ||||||||| ||| || |||||||||||||||| || |||||  |||||||||||||||||    
T  18056772 cttaactcagttggtaaggacaatgcataatatatgcaatgtgtgaggttcgaaccccgac 18056712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 12212293 - 12212364
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacc 250  Q
    |||||| ||||||||| ||| |||||| |||||||||||| || || || || ||||| |||||||||||||    
T  12212293 tcgtgagcttaactcatttggtagggataatgcataatatatgcaacgtccggggttcaaaccccgaccacc 12212364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 17139581 - 17139506
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| |||| |||| ||| ||||||||||||||||||| |  || || || ||||| ||||||||||||||||    
T  17139581 ctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccacc 17139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 30678877 - 30678826
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttc 229  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| ||||| ||||    
T  30678877 ctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttc 30678826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 50271783 - 50271838
Alignment:
Q  3 gttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||||||||||||||||||||| ||||||| ||||  ||| |||| ||||||||||    
T  50271783 gttaagatttggtgtcaacgaattcattgatacctggtgtcaacggatcctgactc 50271838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 21041338 - 21041416
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||||||  ||| |||| ||| || ||||||||||||| || || |||||| ||||||||||||||  ||||||||    
T  21041338 gttctcgtgagtttacctcagttggtatggacaatgcataaaatatgaaatgtttgaggttcgaaccccagccaccacc 21041416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 28341187 - 28341217
Alignment:
Q  187 ttaactcaattgatagggacaatgcataata 217  Q
    |||||||||||||||||||||||||||||||    
T  28341187 ttaactcaattgatagggacaatgcataata 28341217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 29042542 - 29042608
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||| |||||| |||||||||||| |||||  | || ||||| || ||||||||||||    
T  29042542 cttaactcaattggtagggataatgcataatatatgtaagatccggggttcaaatcccgaccaccac 29042608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 15382886 - 15382809
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| |||| ||||||||| |||||| | |||||| ||||||| || || || ||||||||||| |||| |||||||    
T  15382886 gttcttgtgagcttaactcagttgatatgaacaatgtataatatatgcaaggtccgaggttcgaaacccggccaccac 15382809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 16967257 - 16967184
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| |||| || | |||||| |||||||||||||||| || || ||||||||||| ||| ||| |||||||    
T  16967257 tcgtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16967184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 17917189 - 17917128
Alignment:
Q  191 ctcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| |||||| ||||||||||||| || ||||| ||||| | ||| |||||||||||||||    
T  17917189 ctcagttgatatggacaatgcataaaatatgtaaggttcgggattcaaaccccgaccaccac 17917128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 18091200 - 18091237
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataa 215  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  18091200 ctcgtgagcttaactcagttgatagggacaatgcataa 18091237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13263515 - 13263571
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||| ||||||||||||||||||  |||||||||||  ||| |||| ||||||||||    
T  13263515 ggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgactc 13263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 16033514 - 16033474
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||| ||||| |||||||||||||||||||||||    
T  16033514 ctcgtgagcttgactcagttgatagggacaatgcataatat 16033474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 18521244 - 18521284
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||||||||||||| || ||||||||||||||||    
T  18521244 ctcgtgaacttaactcaattggtaaggacaatgcataatat 18521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 25469085 - 25469141
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||||||||||||||||||||||  | |||||||||  ||| |||| ||||||||||    
T  25469085 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 25469141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 32433157 - 32433085
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| ||||||||| | |||| | | ||||||||| || | ||| ||||| |||||||||||||||||||||    
T  32433157 cgtgagcttaactcagtcgatatgaaaaatgcataaaatatataaggttcggggttcgaaccccgaccaccac 32433085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 36467086 - 36467014
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||| |||||||||| |||||||||||||||| || || ||   |||||| || |||||||||||||    
T  36467086 gtgagcttaattcaattgatatggacaatgcataatatatgcaaggtataaggttcaaatcccgaccaccacc 36467014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 41974776 - 41974832
Alignment:
Q  196 ttgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||||| |||||||||||| || || ||| ||||||| ||||||| |||||||    
T  41974776 ttgatagggataatgcataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 49130300 - 49130217
Alignment:
Q  169 aattaggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||| || ||||||| ||||||||||||| || ||  ||||||||| || || ||  |||||| ||||||||||||||||||||    
T  49130300 aattatgtcctcgtgagcttaactcaattggtaaggctaatgcataaaatatgcaagattcgag-ttcgaaccccgaccaccacc 49130217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 49222813 - 49222853
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| |||||||||||||||||| |||||||| |||||    
T  49222813 ctcgtgagcttaactcaattgataggaacaatgcacaatat 49222853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21557430 - 21557503
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| ||||||||| ||  || |||||||||||||||| ||||| || ||||||||||| |||||||||||    
T  21557430 ctcgtgagcttaactcagttagtatggacaatgcataatatatgtaaggtccgaggttcgaatcccgaccacca 21557503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 23159441 - 23159511
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    |||| |||||||||||| ||| |||||||||||||||| || ||  |||| ||||| ||||||||||||||    
T  23159441 gtgaacttaactcaattcatatggacaatgcataatatatgcaagattcggggttcaaaccccgaccacca 23159511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 11708983 - 11709056
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||| |||| |||| ||| ||||||||||||||||||| || || || ||| |||| ||||||||||||||    
T  11708983 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 6471503 - 6471583
Alignment:
Q  173 aggttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| |||||||  ||||||||   |||||| |||||||||||||| || |||||||| ||||| ||||||| ||||||||    
T  6471503 aggtcctcgtgagtttaactcagccgataggaacaatgcataatatatgcaatgttcggggttcaaaccccggccaccacc 6471583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 12938993 - 12938917
Alignment:
Q  176 ttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| | |||||||||| |||||||||||||||||||||| |  || ||||||  ||  |||||||||||||||    
T  12938993 ttctcgtaaacttaactcaactgatagggacaatgcataatatatacaaggttcgaaatttaaaccccgaccaccac 12938917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 13272585 - 13272537
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgt 227  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||    
T  13272585 tcgtgaacttaactcagttgatatggacaatgcataatatatgtaatgt 13272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 18959154 - 18959210
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccc 242  Q
    ||||||||||||| |||||| |||||||||||| || || ||||||||||| |||||    
T  18959154 cttaactcaattgttagggataatgcataatatatgcaaggttcgaggttcaaaccc 18959210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 34420924 - 34420852
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||| ||||||||||||| || ||||||||||||| || || || ||| ||||||| |||| ||||||||||    
T  34420924 cgtgagcttaactcaattggtatggacaatgcataaaatatgcaaggtttgaggttcaaacctcgaccaccac 34420852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 3456884 - 3456833
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcg 230  Q
    |||||| |||||||||||||||| | |||||||||||||| ||||| |||||    
T  3456884 tcgtgaacttaactcaattgatatgaacaatgcataatatatgtaaggttcg 3456833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 13357505 - 13357430
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    ||||||| ||||||||| ||| || |||||||||||||||| || || || |||||||| |||| || ||||||||    
T  13357505 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacctcggccaccacc 13357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 9241012 - 9241086
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||| ||||| ||||||| || | |||||||||||||| ||||| || ||| |||| ||||||| |||||||    
T  9241012 ctcgtgagcttaaatcaattggtaagtacaatgcataatatatgtaaggtccgatgttcaaaccccggccaccac 9241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 16843585 - 16843523
Alignment:
Q  180 cgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccc 242  Q
    ||||| |||||||| ||||||| |||||||| ||||||| || || ||||| |||||||||||    
T  16843585 cgtgagcttaactcgattgataaggacaatgtataatatatgcaaggttcgtggttcgaaccc 16843523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 26654376 - 26654434
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactcaa 60  Q
    |||||||||||||||||||||||  |||||||||||  ||| |||| ||| ||||||||    
T  26654376 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatcttgactcaa 26654434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 30071579 - 30071505
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||||| ||||||| | |||||| | |||||||||||||| |  || ||| ||||||| ||||||||||||||||    
T  30071579 tcgtgaacttaacttagttgataagaacaatgcataatatatacaaggtttgaggttctaaccccgaccaccacc 30071505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 3650518 - 3650591
Alignment:
Q  179 tcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||| ||||||||| ||| |||  | |||||||||||| ||||| ||||| ||||| ||||||| |||||||    
T  3650518 tcgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 10732839 - 10732774
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaacccc 243  Q
    ||||||| ||||||||||||| || | |||||||||||||| |  || |||| |||||||||||||    
T  10732839 ctcgtgagcttaactcaattggtatgaacaatgcataatatatacaaggttcaaggttcgaacccc 10732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 12133604 - 12133527
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||| ||||| ||||||| |||||||| | ||||||||| |||| ||||| ||||| |  |||||| |||||||||||    
T  12133604 gttcacgtgaacttaactgaattgatatgaacaatgcattatatatgtaaggttcgggaatcgaactccgaccaccac 12133527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 18422520 - 18422443
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||| | ||||| ||| |||||||  |||||||||||||| ||||| ||||| | ||| |||||| ||||||||    
T  18422520 gttctcgtaagcttaattcagttgatagaaacaatgcataatatatgtaaggttcgggattcaaaccccaaccaccac 18422443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 26799189 - 26799254
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccacca 251  Q
    ||||||||| ||| |||||||||||||||| || || || ||||| ||||  ||||||||||||||    
T  26799189 cttaactcagttggtagggacaatgcataaaatatgcaaggttcggggttaaaaccccgaccacca 26799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 3165125 - 3165177
Alignment:
Q  7 agatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactca 59  Q
    ||||||||||||||||||  | ||||||||| |||| |||| |||||||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactca 3165177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 8837917 - 8837957
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||||||||  |||||||||||||||||||||||    
T  8837917 ctcgtgaacttaactcggttgatagggacaatgcataatat 8837957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 24429804 - 24429864
Alignment:
Q  186 cttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgac 246  Q
    |||| |||| |||||| ||||||||||||| || ||||| ||||| |||||||||| ||||    
T  24429804 cttagctcacttgatatggacaatgcataaaatatgtaaggttcggggttcgaaccacgac 24429864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31641565 - 31641509
Alignment:
Q  2 ggttaagatttggtgtcaacgaactcattgacacctaatgtaaacgaatcctgactc 58  Q
    |||||||||||||||||||||||  |||||||||||  ||| || | ||||||||||    
T  31641565 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactc 31641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 44632223 - 44632175
Alignment:
Q  204 gacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    ||||||||||||||| | ||| ||||| ||||| |||||||||||||||    
T  44632223 gacaatgcataatatatataaggttcggggttcaaaccccgaccaccac 44632175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 16151 - 16209
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaa 239  Q
    |||| ||||||||| || ||| |||||||||||||||| ||||| ||||||||||||||    
T  16151 gtgaacttaactcatttaataaggacaatgcataatatatgtaaagttcgaggttcgaa 16209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 161141 - 161213
Alignment:
Q  181 gtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccacc 253  Q
    |||| ||||||||| ||| || ||||||||||||| || || || ||||| ||||| ||||||||||||||||    
T  161141 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccaccacc 161213  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 119566 - 119639
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccc-cgaccacca 251  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| || ||||| ||| ||| |||||| |||||||||    
T  119566 ctcgtgagcttaactcagttgatagggacaatgtataatatttgcaatgtccgatgtt-gaaccctcgaccacca 119639  T

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Target: scaffold1160 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 1767 - 1702
Alignment:
Q  187 ttaactcaattgatagggacaatgcataatatctgtaatgttcgaggttcgaaccccgaccaccac 252  Q
    |||||||| ||| |||||||||||||||| || || || |||||||||| |||||||  |||||||    
T  1767 ttaactcagttggtagggacaatgcataaaatatgcaaggttcgaggtttgaaccccagccaccac 1702  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 35995 - 35946
Alignment:
Q  175 gttctcgtgaccttaactcaattgatagggacaatgcataatatctgtaa 224  Q
    |||||||||| |||| |||| ||||||||||||||||| ||||| |||||    
T  35995 gttctcgtgagcttagctcagttgatagggacaatgcacaatatatgtaa 35946  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 99034 - 99074
Alignment:
Q  178 ctcgtgaccttaactcaattgatagggacaatgcataatat 218  Q
    ||||||| ||| ||||| |||||||||||||||||||||||    
T  99034 ctcgtgagcttgactcagttgatagggacaatgcataatat 99074  T

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