View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19053_high_11 (Length: 266)
Name: NF19053_high_11
Description: NF19053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19053_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 23917023 - 23917277
Alignment:
| Q |
10 |
gagcacagaatgaaatcgagggaatttgagtccattggaaaaattcagttagataaatcacttcnnnnnnnnnnnngatgtgattacgaggatgaagcta |
109 |
Q |
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| T |
23917023 |
gagcacagaatgaaatcaagggaatttgagtccattggaaaaattcagttagataaatcacttcaaaaagaaaaaaggcgcgactatgtggatgaagcta |
23917122 |
T |
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| Q |
110 |
taagcatgcagggtttgcaacatcttagccttaagaaaaaagagagaaatcttcattccggttttgaaaatcgacttccaccgttggaacgaaaagataa |
209 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
23917123 |
taagcatgcagggtttgcaacatcatagccttaagaaaaaagaaagaagtcttcattccggttttgaaaatcgacttccaccgttagaacgaaaagataa |
23917222 |
T |
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| Q |
210 |
aggtgtgtcagttggttgcgagaagaaagtgagttccagaagcaatgaaaccaag |
264 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
23917223 |
aggtgtgtcagttggttccgagaagaaagtgagttccagaagcaatgaaaccaag |
23917277 |
T |
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