View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19053_low_12 (Length: 297)
Name: NF19053_low_12
Description: NF19053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19053_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 1699413 - 1699696
Alignment:
| Q |
1 |
ctagttatagaatgtcagaatctagtcctacatagaatagcttcagatgaaaatcgacacagtaaatcacagcatgctgcattcactttaagtatcttta |
100 |
Q |
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| T |
1699413 |
ctagttatagaatgtcagaatctagtcctacataaaatagcttcagatgaaaatccacacagtaaatcacagcatgctgcatacactttaagtatcttta |
1699512 |
T |
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| Q |
101 |
ttgtgttatgatttgtgattccacttcttttcttaatccttcttaaacgcgtgtgctcaatgcgtgacaatagttaaagcgtagcaaaataagttaggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1699513 |
ttgtgttatgatttgtgattccacttcttttcttaatccttcttaaacgcgtgtgctcaatgcgtgacaatagttaaagcgtagcaaaataagttaggtt |
1699612 |
T |
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| Q |
201 |
caaaatctttggactcatgcaaatggacaatgcaattcagataaatacaagtaaatcaaaggcttgaggataaaacaatgagaa |
284 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1699613 |
caaaatctttggactcgtgcaaatggacaatgcaattcagataaatacaagtaaatcaaaggcttgaggataaaacaatgagaa |
1699696 |
T |
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