View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19053_low_16 (Length: 251)
Name: NF19053_low_16
Description: NF19053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19053_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 37213975 - 37213757
Alignment:
| Q |
16 |
atcagctagcagcatacaaatgaagattacctgtaacgcgttaccggatccaaccggaagctcaataggactatttggcagaaagaaagnnnnnnnnntt |
115 |
Q |
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| T |
37213975 |
atcagctagcagcatacaaatgaagattacctgtaacgcgttaccggatccaaccggaagctcaataggactatttggcagaaagaaagaaaaaaaaatt |
37213876 |
T |
|
| Q |
116 |
atattatgtacaataataattacattacaataagatttctggaaaagaaatgcatgcatgcagaaggaggaagaggagagagagtttaatttggtgtagt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37213875 |
atattatgtacaataataattacattacaataagatttctggaaaagaaatgcatgcatgcagaaggaggaagaggagagagagtttaatttggtgtagt |
37213776 |
T |
|
| Q |
216 |
ataatgaaggtccgttttg |
234 |
Q |
| |
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||||||||||||||||||| |
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| T |
37213775 |
ataatgaaggtccgttttg |
37213757 |
T |
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