View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19054_low_17 (Length: 202)

Name: NF19054_low_17
Description: NF19054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19054_low_17
NF19054_low_17
[»] chr8 (7 HSPs)
chr8 (1-133)||(38613625-38613757)
chr8 (130-183)||(6311097-6311150)
chr8 (132-183)||(7290159-7290211)
chr8 (133-183)||(36979184-36979232)
chr8 (133-167)||(18870815-18870849)
chr8 (133-167)||(30655448-30655482)
chr8 (124-183)||(10689385-10689442)
[»] chr5 (10 HSPs)
chr5 (132-183)||(1457394-1457446)
chr5 (133-183)||(27444771-27444822)
chr5 (133-183)||(27449615-27449666)
chr5 (133-183)||(31180079-31180127)
chr5 (133-183)||(43598525-43598576)
chr5 (133-183)||(43604017-43604068)
chr5 (133-183)||(43609509-43609560)
chr5 (150-183)||(30631227-30631260)
chr5 (133-183)||(38191983-38192030)
chr5 (133-183)||(38219208-38219255)
[»] chr4 (8 HSPs)
chr4 (132-183)||(51520257-51520309)
chr4 (132-183)||(56146944-56146996)
chr4 (133-183)||(29760449-29760497)
chr4 (133-167)||(24741748-24741782)
chr4 (154-183)||(9224639-9224668)
chr4 (154-183)||(9229426-9229455)
chr4 (154-183)||(45348050-45348079)
chr4 (154-183)||(45357529-45357558)
[»] chr7 (7 HSPs)
chr7 (131-183)||(2057763-2057813)
chr7 (133-167)||(20357803-20357837)
chr7 (154-183)||(4866553-4866582)
chr7 (154-183)||(12396735-12396764)
chr7 (154-183)||(12406155-12406184)
chr7 (154-183)||(24024560-24024589)
chr7 (154-183)||(31109815-31109844)
[»] chr3 (2 HSPs)
chr3 (131-183)||(7167049-7167099)
chr3 (154-183)||(22173427-22173456)
[»] chr2 (3 HSPs)
chr2 (131-183)||(11099169-11099219)
chr2 (154-183)||(44312856-44312885)
chr2 (133-183)||(25403443-25403490)
[»] scaffold0135 (1 HSPs)
scaffold0135 (154-183)||(35294-35323)
[»] chr6 (5 HSPs)
chr6 (154-183)||(6438324-6438353)
chr6 (154-183)||(11856795-11856824)
chr6 (154-183)||(14737809-14737838)
chr6 (154-183)||(14742668-14742697)
chr6 (154-183)||(22010929-22010958)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 8e-60; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 38613625 - 38613757
Alignment:
Q  1 ctggtcccaggtttcaaaattatgagtaattttaaacttgatactcattgtaatctccgttttcacctgcagggtcttaaatacattgcacaaacaccgt 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613625 ctggtcccagctttcaaaattatgagtaattttaaacttgatactcattgtaatctccgttttcacctgcagggtcttaaatacattgcacaaacaccgt 38613724  T
Q  101 tgccaaggtttgaatctgctgaattttgcttct 133  Q
    |||||||||||||||| |||  |||||||||||    
T  38613725 tgccaaggtttgaatcagctcgattttgcttct 38613757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 6311097 - 6311150
Alignment:
Q  130 ttctgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6311097 ttctgttgtgaatccggttgaaactcacaccaatgaaataaacaatgatgtgtg 6311150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 7290211 - 7290159
Alignment:
Q  132 ctgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||| |||||||  |||||||||||||||||||||||| |||||||||    
T  7290211 ctgttgtgaatccggttccaaactcacaccaatgaaataaacattgatgtgtg 7290159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 36979184 - 36979232
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  36979184 tgttgtgaatccggttgaaactcacaccaatgaa--aaacaaagatgtgtg 36979232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 18870849 - 18870815
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaa 167  Q
    |||||||| ||||||||||||||||||||||||||    
T  18870849 tgttgtgaatccggttgaaactcacaccaatgaaa 18870815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 30655448 - 30655482
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaa 167  Q
    |||||||| ||||||||||||||||||||||||||    
T  30655448 tgttgtgaatccggttgaaactcacaccaatgaaa 30655482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 10689442 - 10689385
Alignment:
Q  124 ttttgcttctgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||| || ||||||| || |||||||||||||||||||||||  |||||| ||||||||    
T  10689442 ttttgattgtgttgtgttttcggttgaaactcacaccaatgaa--aaacaaagatgtgtg 10689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000004; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 1457446 - 1457394
Alignment:
Q  132 ctgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  1457446 ctgttgtgaatccggttccaaactcacaccaatgaaataaacaatgatgtgtg 1457394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 27444771 - 27444822
Alignment:
Q  133 tgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  27444771 tgttgtgaatccggttccaaactcacaccaatgaaataaacaatgatgtgtg 27444822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 27449615 - 27449666
Alignment:
Q  133 tgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||| ||||    
T  27449615 tgttgtgaatccggttccaaactcacaccaatgaaataaacaatgatatgtg 27449666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 31180079 - 31180127
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||||   ||||||||||||||    
T  31180079 tgttgtgaatccggttgaaactcacaccaatgaa--taacaatgatgtgtg 31180127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 43598525 - 43598576
Alignment:
Q  133 tgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  43598525 tgttgtgaatccggttccaaagtcacaccaatgaaataaacaatgatgtgtg 43598576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 43604017 - 43604068
Alignment:
Q  133 tgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  43604017 tgttgtgaatccggttccaaagtcacaccaatgaaataaacaatgatgtgtg 43604068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 43609509 - 43609560
Alignment:
Q  133 tgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  43609509 tgttgtgaatccggttccaaagtcacaccaatgaaataaacaatgatgtgtg 43609560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 30631227 - 30631260
Alignment:
Q  150 aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||||| |||||||||||||||||||||||    
T  30631227 aaactcacacaaatgaaataaacaatgatgtgtg 30631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 38191983 - 38192030
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||   ||||||| ||||||||    
T  38191983 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtg 38192030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 38219208 - 38219255
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||   ||||||| ||||||||    
T  38219208 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtg 38219255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 51520257 - 51520309
Alignment:
Q  132 ctgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  51520257 ctgttgtgaatccggttccaaactcacaccaatgaaataaacaatgatgtgtg 51520309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 56146996 - 56146944
Alignment:
Q  132 ctgttgtgattccggttg-aaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||| |||||||  ||| ||||||||||||||||||||||||||||||    
T  56146996 ctgttgtgaatccggttccaaattcacaccaatgaaataaacaatgatgtgtg 56146944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 29760449 - 29760497
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  29760449 tgttgtgaatccggttgaaactcacaccaatgaa--aaacaaagatgtgtg 29760497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 24741748 - 24741782
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaa 167  Q
    |||||||| ||||||||||||||||||||||||||    
T  24741748 tgttgtgaatccggttgaaactcacaccaatgaaa 24741782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 9224668 - 9224639
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  9224668 tcacaccaatgaaataaacaatgatgtgtg 9224639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 9229455 - 9229426
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  9229455 tcacaccaatgaaataaacaatgatgtgtg 9229426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 45348079 - 45348050
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  45348079 tcacaccaatgaaataaacaatgatgtgtg 45348050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 45357558 - 45357529
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  45357558 tcacaccaatgaaataaacaatgatgtgtg 45357529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 2057763 - 2057813
Alignment:
Q  131 tctgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  2057763 tctgttgtgaatccggttgaaactcacaccaatgaa--aaacaaagatgtgtg 2057813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 20357837 - 20357803
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaa 167  Q
    |||||||| ||||||||||||||||||||||||||    
T  20357837 tgttgtgaatccggttgaaactcacaccaatgaaa 20357803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 4866553 - 4866582
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  4866553 tcacaccaatgaaataaacaatgatgtgtg 4866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 12396735 - 12396764
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  12396735 tcacaccaatgaaataaacaatgatgtgtg 12396764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 12406155 - 12406184
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  12406155 tcacaccaatgaaataaacaatgatgtgtg 12406184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 24024589 - 24024560
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  24024589 tcacaccaatgaaataaacaatgatgtgtg 24024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 31109844 - 31109815
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  31109844 tcacaccaatgaaataaacaatgatgtgtg 31109815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 7167049 - 7167099
Alignment:
Q  131 tctgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  7167049 tctgttgtgaatccggttgaaactcacaccaatgaa--aaacaaagatgtgtg 7167099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 22173456 - 22173427
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  22173456 tcacaccaatgaaataaacaatgatgtgtg 22173427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 11099219 - 11099169
Alignment:
Q  131 tctgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||    
T  11099219 tctgttgtgaatccggttgaaactcacaccaatgaa--aaacaaagatgtgtg 11099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 44312885 - 44312856
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  44312885 tcacaccaatgaaataaacaatgatgtgtg 44312856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 25403443 - 25403490
Alignment:
Q  133 tgttgtgattccggttgaaactcacaccaatgaaataaacaatgatgtgtg 183  Q
    |||||||| |||||||||||||||||||||||   ||||||| ||||||||    
T  25403443 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtg 25403490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 35323 - 35294
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  35323 tcacaccaatgaaataaacaatgatgtgtg 35294  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000007; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 6438324 - 6438353
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  6438324 tcacaccaatgaaataaacaatgatgtgtg 6438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 11856795 - 11856824
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  11856795 tcacaccaatgaaataaacaatgatgtgtg 11856824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 14737838 - 14737809
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  14737838 tcacaccaatgaaataaacaatgatgtgtg 14737809  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 14742697 - 14742668
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  14742697 tcacaccaatgaaataaacaatgatgtgtg 14742668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 22010958 - 22010929
Alignment:
Q  154 tcacaccaatgaaataaacaatgatgtgtg 183  Q
    ||||||||||||||||||||||||||||||    
T  22010958 tcacaccaatgaaataaacaatgatgtgtg 22010929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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