View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19055_low_24 (Length: 241)
Name: NF19055_low_24
Description: NF19055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19055_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 42120554 - 42120762
Alignment:
| Q |
18 |
aaacgaagctccctaaattttaactgatgttgaagttgttaggccacattgatctgacactaaatgttaaccagagtccataaacttgaagtgttgcatt |
117 |
Q |
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| T |
42120554 |
aaacgaagctccctaaattttaactgatgttgaagtcgttaggccacattgatctgacactaaatgttaaccagagtccataaacttgaagtgttgcatt |
42120653 |
T |
|
| Q |
118 |
ctctttaggaactcaacatttacataacttgtaataccttggcaacacaagtgtctctgcaccactgtgcaatgccatcaggtgtttccagaagttcctc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42120654 |
ctctttaggaactcaacatttacataacttgtaataccttggcaacacaagtgtctctgcaccactgtgcaatgccatcaggtgtttccagaagttcctc |
42120753 |
T |
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| Q |
218 |
cattctgtg |
226 |
Q |
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|||| |||| |
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| T |
42120754 |
cattttgtg |
42120762 |
T |
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