View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19057_high_6 (Length: 256)
Name: NF19057_high_6
Description: NF19057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19057_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 35043491 - 35043729
Alignment:
| Q |
1 |
ctcaccagcaaaactagcttttttgttattgcttccttttgaaggcgtctttgaaccattgactaggccattcagaagactttttgttttgccaccacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35043491 |
ctcaccagcaaaactagcttttttgttattgcttccttttgaaggcgtctttgaaccattgactaggccattcagaagactttttgttttgccaccacca |
35043590 |
T |
|
| Q |
101 |
tgtgttacagtgtctggtaacgccggtttttcagagatgatcttctctgactgtgaactagattcttcatttgagacggtgatgtgacttaaaaccacaa |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
35043591 |
tgtgttacagtgtctggtaacgccagtttttcagagatgatcttctctgactgtgaactagattcttcatttgagacggtgacgtgacttaaaaccacaa |
35043690 |
T |
|
| Q |
201 |
catcgtcatttttgcaaattgcatggctgcttgtttcat |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
35043691 |
catcgtcatttttgcaaattgcatggctgcttgtttcat |
35043729 |
T |
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