View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19058_high_33 (Length: 376)

Name: NF19058_high_33
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19058_high_33
NF19058_high_33
[»] chr5 (28 HSPs)
chr5 (42-360)||(5005216-5005534)
chr5 (42-103)||(3518286-3518347)
chr5 (45-103)||(8761753-8761811)
chr5 (42-103)||(12612924-12612985)
chr5 (42-103)||(35358842-35358903)
chr5 (42-101)||(10469856-10469915)
chr5 (45-103)||(31625983-31626041)
chr5 (42-100)||(43152970-43153028)
chr5 (42-103)||(1108101-1108166)
chr5 (42-100)||(9940157-9940215)
chr5 (42-100)||(17574134-17574192)
chr5 (42-100)||(29765934-29765992)
chr5 (45-99)||(38919952-38920006)
chr5 (41-89)||(5043027-5043075)
chr5 (118-165)||(5017230-5017277)
chr5 (42-100)||(35616711-35616769)
chr5 (42-100)||(37821051-37821109)
chr5 (42-99)||(18729188-18729245)
chr5 (42-98)||(125195-125251)
chr5 (42-98)||(11306799-11306855)
chr5 (41-101)||(34698878-34698937)
chr5 (42-98)||(39595377-39595433)
chr5 (42-100)||(8442262-8442320)
chr5 (45-94)||(2863655-2863704)
chr5 (46-99)||(12203252-12203305)
chr5 (42-87)||(34381115-34381160)
chr5 (42-99)||(40201031-40201088)
chr5 (42-98)||(33567151-33567207)
[»] chr3 (48 HSPs)
chr3 (42-101)||(29533864-29533923)
chr3 (42-103)||(50025592-50025653)
chr3 (42-100)||(16295567-16295625)
chr3 (42-103)||(2280280-2280341)
chr3 (42-100)||(9557842-9557900)
chr3 (42-103)||(47140582-47140643)
chr3 (42-100)||(33971986-33972044)
chr3 (42-100)||(38471745-38471803)
chr3 (42-103)||(14847425-14847486)
chr3 (42-100)||(9027716-9027774)
chr3 (42-100)||(43149253-43149311)
chr3 (42-100)||(51385350-51385408)
chr3 (42-99)||(9158947-9159004)
chr3 (43-100)||(33074977-33075034)
chr3 (42-103)||(42643340-42643401)
chr3 (42-99)||(48117439-48117496)
chr3 (42-93)||(21481867-21481918)
chr3 (42-101)||(25559807-25559866)
chr3 (42-103)||(1261282-1261343)
chr3 (42-103)||(10565155-10565215)
chr3 (42-87)||(43894908-43894953)
chr3 (42-99)||(49361748-49361805)
chr3 (42-98)||(5188339-5188395)
chr3 (42-98)||(11173553-11173609)
chr3 (42-86)||(36301132-36301176)
chr3 (42-101)||(25806433-25806492)
chr3 (42-93)||(34208370-34208421)
chr3 (42-92)||(34021381-34021431)
chr3 (42-92)||(37215149-37215199)
chr3 (42-92)||(47484382-47484432)
chr3 (42-92)||(50879698-50879748)
chr3 (42-99)||(2935422-2935479)
chr3 (42-99)||(14838956-14839013)
chr3 (46-99)||(29057755-29057808)
chr3 (42-99)||(29555752-29555809)
chr3 (42-99)||(29846802-29846859)
chr3 (42-99)||(30664604-30664661)
chr3 (46-99)||(43220053-43220106)
chr3 (42-99)||(44689906-44689963)
chr3 (42-87)||(50745652-50745697)
chr3 (42-98)||(1031339-1031395)
chr3 (42-98)||(7231918-7231974)
chr3 (42-98)||(29706006-29706062)
chr3 (60-100)||(31763928-31763968)
chr3 (42-98)||(35368714-35368770)
chr3 (42-98)||(46473231-46473287)
chr3 (43-103)||(47683894-47683954)
chr3 (42-98)||(50294036-50294092)
[»] chr7 (20 HSPs)
chr7 (42-103)||(2600441-2600502)
chr7 (42-103)||(37970036-37970097)
chr7 (42-100)||(47379663-47379721)
chr7 (42-101)||(640495-640554)
chr7 (46-101)||(41458809-41458864)
chr7 (42-101)||(11070331-11070390)
chr7 (42-99)||(44185279-44185336)
chr7 (45-101)||(384657-384713)
chr7 (45-99)||(45335969-45336023)
chr7 (42-99)||(23034224-23034281)
chr7 (42-99)||(27704538-27704595)
chr7 (42-98)||(12141987-12142043)
chr7 (42-92)||(7295570-7295620)
chr7 (42-92)||(26041413-26041463)
chr7 (45-103)||(28548142-28548200)
chr7 (42-92)||(32315929-32315979)
chr7 (42-99)||(24380632-24380689)
chr7 (42-99)||(37848531-37848588)
chr7 (42-99)||(38197764-38197821)
chr7 (42-99)||(41910096-41910153)
[»] chr1 (34 HSPs)
chr1 (42-103)||(27787592-27787653)
chr1 (42-103)||(46903573-46903634)
chr1 (42-101)||(6396430-6396489)
chr1 (42-103)||(644799-644860)
chr1 (42-103)||(2827617-2827678)
chr1 (42-103)||(21446125-21446186)
chr1 (42-103)||(28457254-28457315)
chr1 (46-103)||(31666113-31666170)
chr1 (42-103)||(37741859-37741920)
chr1 (45-100)||(40053012-40053067)
chr1 (42-100)||(37947130-37947188)
chr1 (42-100)||(43757689-43757747)
chr1 (42-100)||(51436342-51436399)
chr1 (44-100)||(30596819-30596875)
chr1 (42-100)||(8577412-8577470)
chr1 (42-100)||(31244645-31244703)
chr1 (42-101)||(44714344-44714405)
chr1 (45-103)||(49615182-49615240)
chr1 (45-100)||(43105211-43105266)
chr1 (42-80)||(27954331-27954369)
chr1 (42-103)||(24158753-24158814)
chr1 (42-99)||(26760665-26760722)
chr1 (42-99)||(40240022-40240079)
chr1 (45-99)||(4618750-4618804)
chr1 (42-92)||(19920865-19920915)
chr1 (42-92)||(39010917-39010967)
chr1 (42-80)||(48028629-48028667)
chr1 (42-99)||(1100320-1100377)
chr1 (42-99)||(23399900-23399957)
chr1 (42-99)||(29638818-29638875)
chr1 (42-99)||(30414967-30415024)
chr1 (42-99)||(41564791-41564848)
chr1 (42-99)||(48962089-48962146)
chr1 (42-98)||(5477075-5477131)
[»] scaffold0592 (1 HSPs)
scaffold0592 (41-100)||(1012-1071)
[»] chr4 (36 HSPs)
chr4 (42-101)||(1987622-1987681)
chr4 (42-103)||(4949141-4949202)
chr4 (42-103)||(46309030-46309091)
chr4 (42-101)||(30250207-30250266)
chr4 (42-101)||(9827894-9827953)
chr4 (42-100)||(34538033-34538091)
chr4 (42-100)||(45678366-45678424)
chr4 (42-99)||(4878070-4878127)
chr4 (42-103)||(43983000-43983061)
chr4 (42-94)||(29577352-29577404)
chr4 (45-85)||(54803255-54803295)
chr4 (48-99)||(37775338-37775389)
chr4 (46-101)||(46799862-46799917)
chr4 (45-99)||(8487741-8487795)
chr4 (42-100)||(33776997-33777055)
chr4 (42-103)||(37732052-37732113)
chr4 (42-99)||(50291385-50291442)
chr4 (64-100)||(26442298-26442334)
chr4 (42-82)||(33593288-33593328)
chr4 (42-111)||(45418164-45418234)
chr4 (45-100)||(29863657-29863712)
chr4 (42-93)||(53781754-53781805)
chr4 (48-87)||(54801410-54801449)
chr4 (45-99)||(4577670-4577724)
chr4 (42-100)||(6093515-6093573)
chr4 (42-92)||(8026682-8026732)
chr4 (42-99)||(22893971-22894028)
chr4 (42-99)||(22945639-22945696)
chr4 (42-103)||(36946999-36947060)
chr4 (42-99)||(46355202-46355259)
chr4 (42-99)||(46791902-46791959)
chr4 (42-98)||(5234383-5234439)
chr4 (42-98)||(9162169-9162225)
chr4 (43-99)||(18944389-18944445)
chr4 (42-98)||(31275249-31275305)
chr4 (42-98)||(42915131-42915187)
[»] chr8 (31 HSPs)
chr8 (42-103)||(5742564-5742625)
chr8 (42-103)||(45405742-45405803)
chr8 (42-100)||(42651023-42651081)
chr8 (43-100)||(28156307-28156364)
chr8 (42-100)||(14233554-14233612)
chr8 (46-103)||(38939099-38939156)
chr8 (42-92)||(34247877-34247927)
chr8 (42-99)||(6243137-6243194)
chr8 (42-103)||(32674139-32674200)
chr8 (42-99)||(41776278-41776335)
chr8 (42-100)||(8233406-8233464)
chr8 (42-100)||(34578247-34578305)
chr8 (42-99)||(22203126-22203183)
chr8 (42-99)||(23265264-23265321)
chr8 (42-99)||(25430749-25430806)
chr8 (42-99)||(37471746-37471803)
chr8 (42-100)||(1422612-1422670)
chr8 (42-92)||(9305915-9305965)
chr8 (42-100)||(18550082-18550140)
chr8 (45-99)||(21649081-21649135)
chr8 (42-92)||(22767233-22767283)
chr8 (45-87)||(33692827-33692869)
chr8 (46-99)||(13924116-13924169)
chr8 (42-99)||(22836050-22836107)
chr8 (46-103)||(33635682-33635739)
chr8 (42-99)||(34838181-34838238)
chr8 (42-87)||(43590797-43590842)
chr8 (42-98)||(6005047-6005103)
chr8 (41-81)||(7129635-7129675)
chr8 (60-100)||(34883285-34883325)
chr8 (46-86)||(40459688-40459728)
[»] chr2 (42 HSPs)
chr2 (42-103)||(34373111-34373172)
chr2 (42-103)||(38724224-38724285)
chr2 (42-103)||(40721874-40721935)
chr2 (42-101)||(4858216-4858275)
chr2 (42-101)||(43026039-43026098)
chr2 (42-100)||(1151632-1151690)
chr2 (42-103)||(304899-304960)
chr2 (45-100)||(13850094-13850149)
chr2 (45-100)||(27329019-27329074)
chr2 (45-103)||(9377665-9377723)
chr2 (45-99)||(23141460-23141514)
chr2 (45-99)||(23553250-23553304)
chr2 (45-99)||(30340100-30340154)
chr2 (42-100)||(35518378-35518436)
chr2 (42-103)||(25094455-25094516)
chr2 (42-99)||(43205196-43205253)
chr2 (42-101)||(11728030-11728089)
chr2 (45-100)||(37827695-37827750)
chr2 (42-100)||(8757647-8757705)
chr2 (42-99)||(13881198-13881255)
chr2 (42-99)||(14021323-14021380)
chr2 (42-99)||(38533109-38533166)
chr2 (60-103)||(24727523-24727566)
chr2 (61-99)||(33569690-33569728)
chr2 (45-99)||(37064164-37064218)
chr2 (42-99)||(11828731-11828788)
chr2 (42-99)||(34141546-34141603)
chr2 (42-99)||(35705828-35705885)
chr2 (46-99)||(41156914-41156967)
chr2 (42-99)||(45202043-45202100)
chr2 (42-98)||(3091844-3091900)
chr2 (42-93)||(35008018-35008069)
chr2 (42-96)||(16463395-16463449)
chr2 (42-100)||(19523311-19523369)
chr2 (42-92)||(44484574-44484624)
chr2 (42-99)||(24491588-24491645)
chr2 (42-99)||(27538843-27538900)
chr2 (42-103)||(32755781-32755842)
chr2 (42-99)||(35203660-35203717)
chr2 (42-98)||(11164288-11164344)
chr2 (42-94)||(13711164-13711216)
chr2 (42-98)||(27529630-27529686)
[»] chr6 (13 HSPs)
chr6 (46-103)||(34976723-34976780)
chr6 (42-100)||(608571-608629)
chr6 (42-100)||(22422253-22422311)
chr6 (45-102)||(3335366-3335423)
chr6 (42-99)||(7304016-7304073)
chr6 (42-99)||(9395248-9395305)
chr6 (44-99)||(6997461-6997516)
chr6 (42-99)||(2165211-2165268)
chr6 (42-99)||(2176844-2176901)
chr6 (42-80)||(12151787-12151825)
chr6 (42-99)||(10557512-10557569)
chr6 (42-99)||(32135348-32135405)
chr6 (45-81)||(16865635-16865671)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-100)||(54572-54630)
[»] scaffold0058 (1 HSPs)
scaffold0058 (42-99)||(3046-3103)
[»] scaffold0286 (1 HSPs)
scaffold0286 (42-99)||(17141-17198)
[»] scaffold0014 (1 HSPs)
scaffold0014 (42-99)||(145150-145207)


Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-165; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 42 - 360
Target Start/End: Original strand, 5005216 - 5005534
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggtcgtaaaaaaccactttttcatttgattaagatgaatat 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5005216 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggtcgtaaaaaaccactttttcatttgattaagatgaatat 5005315  T
Q  142 gattagcagaacacgcaagacaaaactgagacaaatatgactatgagccatattaccagcagcgacagtaatagtccttcatatgacaatatgcctaact 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5005316 gattagcagaacacgcaggacaaaactgagacaaatatgactatgagccatattaccagcagcggcagtaatagtccttcatatgacaatatgcctaact 5005415  T
Q  242 taaatcagcaccaccaacaaccatcaatgtttcaatggccttataaccctcaatataccacacaaacaccatggacacagttaccgcatccacagcaagg 341  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5005416 caaatcagcaccaccaataaccatcaatgtttcaatggccttataaccctcaatatgccacacaaacatcatggacacagttaccgcatccacagcaagg 5005515  T
Q  342 acacccaacattgcccttt 360  Q
    |||||||||||||||||||    
T  5005516 acacccaacattgcccttt 5005534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 3518286 - 3518347
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  3518286 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 3518347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 8761753 - 8761811
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  8761753 tttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 8761811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 12612985 - 12612924
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  12612985 ttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggt 12612924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 35358903 - 35358842
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  35358903 ttgtttttgtccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 35358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 10469915 - 10469856
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  10469915 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatg 10469856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 31626041 - 31625983
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||    
T  31626041 tttttgaccaatgagaagagagaacaataaagttgtcttaaaagttgtactaaaatggt 31625983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 43153028 - 43152970
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||    
T  43153028 ttgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaat 43152970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 1108101 - 1108166
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaag----ttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| |||||||||||||||||    |||||||||| ||||||||||||||||    
T  1108101 ttgtttttgaccaatgagaagagagaacaacaaagttgtttgtctcaaaggttgtaccaaaatggt 1108166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 9940157 - 9940215
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||| ||||| ||||||    
T  9940157 ttgtttttgaccaatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaat 9940215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 17574192 - 17574134
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||| ||| |||| |||||||||| |||||| ||||||||||||||||||    
T  17574192 ttgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaat 17574134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 29765934 - 29765992
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||||||  | |||||||||||||||| ||||||| |||||||||||||    
T  29765934 ttgtttttgaccaatgaataaagagaacaacaaagttatctcaaaggttgtaccaaaat 29765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 38919952 - 38920006
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  38919952 tttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaa 38920006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 5043027 - 5043075
Alignment:
Q  41 gttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagt 89  Q
    |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  5043027 gttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagt 5043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 5017230 - 5017277
Alignment:
Q  118 ttttcatttgattaagatgaatatgattagcagaacacgcaagacaaa 165  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  5017230 ttttcattttattaagatgaatatgattaacagaacaagcaagacaaa 5017277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 35616769 - 35616711
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||| ||||| || |||||||||    
T  35616769 ttgtttttgaccaataagaagagagaacaacaaggttgtcccaaaatttataccaaaat 35616711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 37821109 - 37821051
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||  ||||||| |||||| ||||||||||||||||||    
T  37821109 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaat 37821051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 18729245 - 18729188
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| |||||||||||||||||    
T  18729245 ttgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgtaccaaaa 18729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 125195 - 125251
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  125195 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaa 125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 11306799 - 11306855
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||||| ||  |||||||||||||||||||| ||||    
T  11306799 ttgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaa 11306855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 34698878 - 34698937
Alignment:
Q  41 gttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||| | |||||| |||||| |||||||||||||| || |||||||||||||||||    
T  34698878 gttgttttttatcaatgagaagagaaaacaacaaagttgtttc-aaagttgtaccaaaatg 34698937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 39595377 - 39595433
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  39595377 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 39595433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 8442262 - 8442320
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||| |||||||||| |||||||||||||||| ||||  ||||| || |||||||||    
T  8442262 ttgtttctgaccaatgagaagagagaacaacaaaattgttccaaaaattataccaaaat 8442320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 2863655 - 2863704
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtac 94  Q
    |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  2863655 tttttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgtac 2863704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 12203252 - 12203305
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||| |||||||| ||||||| |||||||  ||||| |||||||||||||||||    
T  12203252 ttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaa 12203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 34381115 - 34381160
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    ||||||||||||||||| ||||||||| ||| |||||||| |||||    
T  34381115 ttgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaa 34381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 40201088 - 40201031
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||| ||||    
T  40201088 ttgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtacaaaaa 40201031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 33567207 - 33567151
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  || ||||| ||||||||||| ||||    
T  33567207 ttgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaa 33567151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 29533864 - 29533923
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29533864 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 29533923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 50025653 - 50025592
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  50025653 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 50025592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 16295567 - 16295625
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  16295567 ttgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaat 16295625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 2280280 - 2280341
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  2280280 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggt 2280341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 9557900 - 9557842
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9557900 ttgtttttaaccaatgagaagagagaacaacaaaattgtctcaaaagttgtaccaaaat 9557842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 47140643 - 47140582
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  47140643 ttgtttttgataaatgaaaatagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 47140582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 33971986 - 33972044
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  33971986 ttgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaat 33972044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 38471745 - 38471803
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  38471745 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaat 38471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 14847486 - 14847425
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| |||| |||||||||||||||||| ||| ||||||||||||||||    
T  14847486 ttgtttttaaccaatgagaagatagaacaacaaagttgtctaaaaggttgtaccaaaatggt 14847425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 9027716 - 9027774
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||    
T  9027716 ttgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaat 9027774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 43149311 - 43149253
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||    
T  43149311 ttgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaat 43149253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 51385408 - 51385350
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||  |||||| |||||||||||| |||||    
T  51385408 ttgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaat 51385350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 9159004 - 9158947
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  9159004 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 9158947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 33074977 - 33075034
Alignment:
Q  43 tgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||| | || |||||||||||||||||||||||| ||||||| |||||    
T  33074977 tgtttttgaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaat 33075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 42643340 - 42643401
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||| || || |||||||||    
T  42643340 ttgtttttgacaaatgagaagagagaacaacaaaattgtctcaaaaattatatcaaaatggt 42643401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 48117439 - 48117496
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  48117439 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 48117496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 21481867 - 21481918
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgta 93  Q
    ||||||||||||||||| ||||||||||||  | ||||||||||||||||||    
T  21481867 ttgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgta 21481918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 25559807 - 25559866
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    |||||||||| |||||| |||||||||||| ||| |||||||||| |||||| |||||||    
T  25559807 ttgtttttgatcaatgagaagagagaacaataaaattgtctcaaaggttgtatcaaaatg 25559866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 1261343 - 1261282
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| |||||| |||||||||||||||| |||| ||||| ||| |||||    
T  1261343 ttgtttttaaccaatgagaagagaaaacaacaaagttgtctaaaaaattgtatcaacatggt 1261282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 10565155 - 10565215
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||| | || ||||||||| ||||||||||| |||| ||||||||||||||    
T  10565155 ttgtttttgaccaataaaaatagagaacaataaagttgtctc-aaaggtgtaccaaaatggt 10565215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 43894953 - 43894908
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||    
T  43894953 ttgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaa 43894908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 49361805 - 49361748
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| ||||||||||| |||| |||| |||||||||||| |||||||||||| ||||    
T  49361805 ttgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaa 49361748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 5188339 - 5188395
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||||| ||  |||||||| ||||||||||||||||    
T  5188339 ttgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtaccaaa 5188395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 11173553 - 11173609
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  11173553 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 11173609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 36301176 - 36301132
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaa 86  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||    
T  36301176 ttgtttttaaccaatgagaagagagaacaacaaagttatctcaaa 36301132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 25806492 - 25806433
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||| | || ||||||||||||| |||| | ||| ||||||||||||||    
T  25806492 ttgtttttgaccaataaaaaaagagaacaacaaaattgtttaaaaggttgtaccaaaatg 25806433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 34208370 - 34208421
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgta 93  Q
    |||||||| | |||||| ||||||||| |||||||||||||||||| |||||    
T  34208370 ttgtttttaatcaatgagaagagagaaaaacaaagttgtctcaaaaattgta 34208421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 34021431 - 34021381
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| |||||||||||| | ||||||||    
T  34021431 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 34021381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 37215199 - 37215149
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  37215199 ttgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 47484382 - 47484432
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||| ||||||||||| || ||||| ||||    
T  47484382 ttgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 50879698 - 50879748
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    |||| |||||||||| | |||||||||||||||||||||| | ||||||||    
T  50879698 ttgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgt 50879748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 2935479 - 2935422
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||| ||||    
T  2935479 ttgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaa 2935422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 14839013 - 14838956
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| ||||| |||||||||||    
T  14839013 ttgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaaattgtaccaaaa 14838956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 29057755 - 29057808
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||| |||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  29057755 ttttaaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 29057808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 29555809 - 29555752
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||| ||| | ||||||  ||||||| |||||| |||||||||||||||||    
T  29555809 ttgtttttgactaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaa 29555752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 29846859 - 29846802
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||| ||||| || ||||||| ||||||| |||||| ||||||||||| |||||    
T  29846859 ttgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 29846802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 30664604 - 30664661
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  |||||||| ||||  |||||||||||||||||    
T  30664604 ttgtttttgaccaataaaaagagaacacaacaaaattgttccaaaagttgtaccaaaa 30664661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 43220106 - 43220053
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||| || ||||||||||||| ||||| |||||||| ||| ||||    
T  43220106 ttttgaccaatgagaatagagaacaacaaaattgtcccaaaagttatactaaaa 43220053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 44689906 - 44689963
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| |||||||||| ||||||    
T  44689906 ttgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgttccaaaa 44689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 50745652 - 50745697
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    ||||||||||||||||| ||||||| ||||||| |||||| |||||    
T  50745652 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaa 50745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 1031395 - 1031339
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||| | |||| |||| || |||||||||  |||||||||||||||    
T  1031395 ttgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgtaccaaa 1031339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 7231974 - 7231918
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  || ||||| ||||||||||| ||||    
T  7231974 ttgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaa 7231918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 29706006 - 29706062
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  29706006 ttgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 29706062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 31763928 - 31763968
Alignment:
Q  60 aagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  31763928 aagagagaacaacaaaattgtcccaaaaattgtaccaaaat 31763968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 35368714 - 35368770
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||| |||||||  ||||| ||||||||||| ||||    
T  35368714 ttgttttttaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaa 35368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 46473231 - 46473287
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  ||||||||  |||||||||| ||||    
T  46473231 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaa 46473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 47683894 - 47683954
Alignment:
Q  43 tgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||||| | |||||||||  | || |||||||||||||||||  |||||||||    
T  47683894 tgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggt 47683954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 50294092 - 50294036
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||||| |||||| ||||||||| || |||||||||  | |||||||||||||    
T  50294092 ttgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttgtaccaaa 50294036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 2600502 - 2600441
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2600502 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 2600441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 37970036 - 37970097
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  37970036 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggt 37970097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 47379663 - 47379721
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  47379663 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagttgcaccaaaat 47379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 640495 - 640554
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||    
T  640495 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattataccaaaatg 640554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 41458864 - 41458809
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||||||||    
T  41458864 ttttgatcaatgaaaaaagagaacaacaaagttgtctcaaaagttgtaccaaaatg 41458809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 11070331 - 11070390
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||  || ||||||||||    
T  11070331 ttgtttttgaccaatgaaaagagagaagaacaaagttgtctcaaagattctaccaaaatg 11070390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 44185279 - 44185336
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||||| |||||    
T  44185279 ttgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaa 44185336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 384657 - 384713
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||| |||||||| ||||||||| ||||||||||||||||| |||||| |||||||    
T  384657 tttttaaccaatgagaagagagaataacaaagttgtctcaaaggttgtatcaaaatg 384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 45335969 - 45336023
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||    
T  45335969 tttttgaccaataaaaagagagaacaacaaggttgtcccaaaatttgtaccaaaa 45336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 23034281 - 23034224
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | || |||| ||||||| |||||| |||||||||||||||||    
T  23034281 ttgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaa 23034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 27704538 - 27704595
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  |||||||||||||| ||||||||||| |||||    
T  27704538 ttgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgtaacaaaa 27704595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 12141987 - 12142043
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| |||| |||| || ||||||||| ||||||||||| ||||    
T  12141987 ttgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaa 12142043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 7295570 - 7295620
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||||| ||||| |||||  ||||||||||    
T  7295570 ttgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgt 7295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 26041413 - 26041463
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| |||||||||||| | ||||||||    
T  26041413 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 26041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 28548200 - 28548142
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||| |||||| | |||||||||||| ||||||||||||||  |||||| ||||||||    
T  28548200 tttttaaccaataagaagagagaacaataaagttgtctcaaagattgtactaaaatggt 28548142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 32315929 - 32315979
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| ||||| |||||| ||||||||||    
T  32315929 ttgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgt 32315979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 24380689 - 24380632
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||  |||||||||||||||||    
T  24380689 ttgtttttgaccaataagaagagaacacaacaaggttgttccaaaagttgtaccaaaa 24380632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 37848588 - 37848531
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||  |||||||||| |||||    
T  37848588 ttgtttttgaccaatgaaaagagagcacaacaaggttatcctaaaagttgtagcaaaa 37848531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 38197764 - 38197821
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| |||| || |||||||  ||||| ||||||||||| |||||    
T  38197764 ttgtttttgaccaatgaaaagatagcacaacaagattgtcccaaaagttgtagcaaaa 38197821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 41910153 - 41910096
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| ||||||  ||||||||||||||||    
T  41910153 ttgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaa 41910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 27787592 - 27787653
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27787592 ttgtttttgacaaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 27787653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 46903573 - 46903634
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  46903573 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 46903634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 6396430 - 6396489
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  6396430 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatg 6396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 644799 - 644860
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  644799 ttgtttttgactaatgagaagagagaacaataaagttgtctcaaatgttgtaccaaaatggt 644860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 2827678 - 2827617
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||    
T  2827678 ttgtttttgaccaataagaagagagaacaacaaaattgtctcaaaggttgtaccaaaatggt 2827617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 21446186 - 21446125
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  21446186 ttgtttttaaccaatgagaagagagatcaacaaagttgtctcaaaggttgtaccaaaatggt 21446125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 28457315 - 28457254
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||    
T  28457315 ttgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggt 28457254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 31666170 - 31666113
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  31666170 ttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggt 31666113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 37741920 - 37741859
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  37741920 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaaattgtatcaaaatggt 37741859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 40053012 - 40053067
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  40053012 tttttgaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaat 40053067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 37947188 - 37947130
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||||    
T  37947188 ttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaat 37947130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 43757689 - 43757747
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||    
T  43757689 ttgtttttaaccaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaat 43757747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 51436399 - 51436342
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  51436399 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaag-tgtaccaaaat 51436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 30596819 - 30596875
Alignment:
Q  44 gtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||    
T  30596819 gtttttgaccaatgaaaagaaagaacaataaagttgtctcaaaggttgtaccaaaat 30596875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 8577470 - 8577412
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| || |||||||||||| |||||| |||||||| |||||||||    
T  8577470 ttgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaat 8577412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 31244703 - 31244645
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||  |||||| |||| |||||||||||||    
T  31244703 ttgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaat 31244645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 44714344 - 44714405
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaa--caaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||| | ||||||||||||  ||||||||||||||| ||||||||||||||    
T  44714344 ttgtttttgaccaataaaaagagagaacaaaacaaagttgtctcaaaggttgtaccaaaatg 44714405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 49615240 - 49615182
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||||| || ||||||||| ||||||||||||||  |||||||||||||||    
T  49615240 tttttgaccaatgagaaaagagaacaataaagttgtctcaaagattgtaccaaaatggt 49615182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 43105211 - 43105266
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||| | |||||||||||| ||||||||| ||||| ||||||||||||    
T  43105211 tttttgaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaat 43105266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 27954331 - 27954369
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgt 80  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  27954331 ttgtttttgaccaatgagaagagagaacaacaaagttgt 27954369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 24158753 - 24158814
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||| | |||| |||||||||||||||||||||| ||||| || |||||||    
T  24158753 ttgttttttaccaataagaagacagaacaacaaagttgtctcaaaggttgttcctaaatggt 24158814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 26760665 - 26760722
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||||||||| || |||||    
T  26760665 ttgtttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttataacaaaa 26760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 40240079 - 40240022
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| |||| || ||||||| |||||| ||||||||||| |||||    
T  40240079 ttgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaa 40240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 4618750 - 4618804
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| || |||||||||||| ||| || |||||||| ||||||||    
T  4618750 tttttgaccaatgaaaaaagagaacaacaaggttatcccaaaagttataccaaaa 4618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 19920865 - 19920915
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| |||||||||||| | ||||||||    
T  19920865 ttgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 19920915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 39010917 - 39010967
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  39010917 ttgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 39010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 48028629 - 48028667
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgt 80  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  48028629 ttgtttttaaccaatgagaagagagaacaacaaagttgt 48028667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 1100320 - 1100377
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||| ||||    
T  1100320 ttgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaa 1100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 23399957 - 23399900
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| ||||| |||||||||||    
T  23399957 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaa 23399900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 29638818 - 29638875
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  |||||||| ||||| ||||| |||||||||||    
T  29638818 ttgtttttgaccaataagaagagaacacaacaaaattgtcccaaaaattgtaccaaaa 29638875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 30414967 - 30415024
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  |||||||  ||||| |||||||||||||||||    
T  30414967 ttgtttttgaccaataagaagagaacacaacaagattgtcccaaaagttgtaccaaaa 30415024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 41564848 - 41564791
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| ||||| |||||||||||    
T  41564848 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaa 41564791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 48962089 - 48962146
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| ||||| |||||||||||    
T  48962089 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaa 48962146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 5477131 - 5477075
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||| | ||||||||| ||  |||||||| ||||||||||| ||||    
T  5477131 ttgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 5477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 1012 - 1071
Alignment:
Q  41 gttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  1012 gttgtttttgaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaat 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 1987681 - 1987622
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1987681 ttgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatg 1987622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 4949202 - 4949141
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  4949202 ttgtttttaaccaatgagaagaaagaacaacaaagttgtctcaaaagttgtaccaaaatggt 4949141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 46309091 - 46309030
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  46309091 ttgtttttgaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggt 46309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 30250266 - 30250207
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  30250266 ttgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatg 30250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 9827953 - 9827894
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||    
T  9827953 ttgtttttgaccaatgagaagagataacaacaaagttgtctcaaaggttataccaaaatg 9827894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 34538033 - 34538091
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||| |||||||| ||| |||| |||||||||||||||||||||| |||||||||||||    
T  34538033 ttgtgtttgaccattgaaaagatagaacaacaaagttgtctcaaaggttgtaccaaaat 34538091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 45678366 - 45678424
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||    
T  45678366 ttgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaat 45678424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 4878070 - 4878127
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  4878070 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 4878127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 43983000 - 43983061
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||| |  |||||  ||||||||||||||||||||    
T  43983000 ttgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggt 43983061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 29577404 - 29577352
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtac 94  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||    
T  29577404 ttgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgtac 29577352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 54803295 - 54803255
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaa 85  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  54803295 tttttgaccaatgaaaagagagaacaacaaagttgtctcaa 54803255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 37775389 - 37775338
Alignment:
Q  48 ttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  37775389 ttgaccaatgataatagagaataacaaggttgtctcaaaagttgtacgaaaa 37775338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 46799862 - 46799917
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||| || |||||||||||| |||||| ||||| |||||||||||||    
T  46799862 ttttgaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatg 46799917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 8487741 - 8487795
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||| | ||||||| ||||||| |||||||||||||||||| |||||    
T  8487741 tttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttgtagcaaaa 8487795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 33776997 - 33777055
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| ||| || ||||| ||||||||||||    
T  33776997 ttgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaat 33777055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 37732052 - 37732113
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||| | |||||||||||| |||||||| |||||  ||||||| |||||||    
T  37732052 ttgtttttgaccaataaaaagagagaacaataaagttgtttcaaagattgtaccgaaatggt 37732113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 50291385 - 50291442
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| |||||||||||||||||    
T  50291385 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaa 50291442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 26442334 - 26442298
Alignment:
Q  64 gagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26442334 gagaacaacaaagttgtctcaaaggttgtaccaaaat 26442298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 33593328 - 33593288
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtct 82  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  33593328 ttgtttttgaccaataaaaagagagaacaacaaagttgtct 33593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 45418164 - 45418234
Alignment:
Q  42 ttgtttttgaccaatgataagagagaaca--acaaagttgtctcaaaagttgtaccaaaatggtcgtaaaaa 111  Q
    ||||||||||||||||| || ||||||||  | ||||||||||| |||| ||||||||||||||||| ||||    
T  45418164 ttgtttttgaccaatgaaaatagagaacaatataaagttgtctc-aaaggtgtaccaaaatggtcgttaaaa 45418234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 29863657 - 29863712
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||| |||||| | ||| |||| |||||| |||||||||||||||||||||||||    
T  29863657 tttttaaccaataagaagggagagcaacaatgttgtctcaaaagttgtaccaaaat 29863712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 53781805 - 53781754
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgta 93  Q
    ||||||||||||||||| ||||||| | ||||| |||||| |||||||||||    
T  53781805 ttgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgta 53781754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 54801449 - 54801410
Alignment:
Q  48 ttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  54801449 ttgaccaatgagaagagagaataacaaagttgtctcaaaa 54801410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 4577670 - 4577724
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| |||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  4577670 ttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 4577724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 6093573 - 6093515
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||| || | |||||||||||||||| ||||||||||  || |||||||||    
T  6093573 ttgtttttgaccgataaaaagagagaacaacaaaattgtctcaaagattataccaaaat 6093515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 8026732 - 8026682
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| |||||||||||| | ||||||||    
T  8026732 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 8026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 22893971 - 22894028
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||| |||||||  ||||| ||||||||||| |||||    
T  22893971 ttgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaa 22894028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 22945639 - 22945696
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||| |||||||  ||||| ||||||||||| |||||    
T  22945639 ttgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaa 22945696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 36947060 - 36946999
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||| |||| | |||||||||||||||| || |||||||| || || |||||||||    
T  36947060 ttgtttttgatcaataaaaagagagaacaacaaaattatctcaaaaattatatcaaaatggt 36946999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 46355259 - 46355202
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||| ||||||||||| || |||||| | |||||||||| |||||||||||| ||||    
T  46355259 ttgttattgaccaatgagaaaagagaataccaaagttgtcccaaaagttgtacaaaaa 46355202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 46791959 - 46791902
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||| ||||||  |||||||||||  | |||||||||||||||||| |||||    
T  46791959 ttgtttttgatcaatgagtagagagaacaatgaggttgtctcaaaagttgtatcaaaa 46791902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 5234439 - 5234383
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||| | ||||||||| || ||| ||||| ||||||||||| ||||    
T  5234439 ttgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaa 5234383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 9162169 - 9162225
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||| ||||| ||||    
T  9162169 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaa 9162225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 18944389 - 18944445
Alignment:
Q  43 tgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| | ||||||  |||| || |||||| |||||||||||||||||    
T  18944389 tgtttttgaccaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaa 18944445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 31275249 - 31275305
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  || ||||| ||||||||||| ||||    
T  31275249 ttgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaa 31275305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 42915187 - 42915131
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  42915187 ttgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 42915131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 5742625 - 5742564
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  5742625 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggatgtaccaaaatggt 5742564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 45405803 - 45405742
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  45405803 ttgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggt 45405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 42651023 - 42651081
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  42651023 ttgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaat 42651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 28156307 - 28156364
Alignment:
Q  43 tgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  28156307 tgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaat 28156364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 14233612 - 14233554
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  14233612 ttgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagttataccaaaat 14233554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 38939156 - 38939099
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||| |||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  38939156 ttttaaccaatgagaagagagaacaacaaagttatctcaaaaattgtaccaaaatggt 38939099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 34247877 - 34247927
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  34247877 ttgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgt 34247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 6243137 - 6243194
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| |||||    
T  6243137 ttgtttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaa 6243194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 32674200 - 32674139
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| ||| || |||||||||||||||||||| ||||||| ||||||||    
T  32674200 ttgtttttaaccaatgagaagggataacaacaaagttgtctcaaaggttgtactaaaatggt 32674139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 41776278 - 41776335
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  41776278 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 41776335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 8233464 - 8233406
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||| ||| ||  ||||||||||| |||||    
T  8233464 ttgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaat 8233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34578305 - 34578247
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||| |||| | |||||||||||||||||||||| ||||| || |||||||||    
T  34578305 ttgtttttgatcaataagaagagagaacaacaaagttgtcccaaaaattataccaaaat 34578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 22203183 - 22203126
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||| ||||||| |||||| ||||||||||| |||||    
T  22203183 ttgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 22203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 23265321 - 23265264
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||| |||||||| ||||| ||||||||||| |||||    
T  23265321 ttgtttttgaccaataaaaagagagcacaacaaaattgtcgcaaaagttgtaacaaaa 23265264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 25430749 - 25430806
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| |||||||||||||||||    
T  25430749 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaa 25430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 37471746 - 37471803
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||  ||||| ||||||||||| |||||    
T  37471746 ttgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaa 37471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 1422670 - 1422612
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| || | |||| ||||| |||||| ||||||||||| ||||||    
T  1422670 ttgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaat 1422612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9305965 - 9305915
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    |||||||||| |||||| ||||||||| | ||| |||||||||||||||||    
T  9305965 ttgtttttgatcaatgaaaagagagaatatcaaggttgtctcaaaagttgt 9305915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 18550082 - 18550140
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||| |||| | ||||||  ||||||| |||||| ||||||||||||||||||    
T  18550082 ttgtttttgatcaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaat 18550140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 21649135 - 21649081
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||| | ||||||| ||||||| |||||| ||||||||||| |||||    
T  21649135 tttttgaccaataaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 21649081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 22767233 - 22767283
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  22767233 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 33692827 - 33692869
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    |||||||||||||| ||||||| |||||||||||||| |||||    
T  33692827 tttttgaccaatgaaaagagagcacaacaaagttgtcccaaaa 33692869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 13924116 - 13924169
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||| |||||||| ||||||| |||||||  ||||| |||||||||||||||||    
T  13924116 ttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaa 13924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 22836107 - 22836050
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| ||| || ||||| ||||| |||||    
T  22836107 ttgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaa 22836050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 33635682 - 33635739
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||| |||||||||||| |||||| |||||||  |||||  ||||||||    
T  33635682 ttttgaccaatgagaagagagaacaataaagttatctcaaagattgtattaaaatggt 33635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 34838238 - 34838181
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| ||||||  ||||||||||||||||    
T  34838238 ttgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaa 34838181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 43590797 - 43590842
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaa 87  Q
    ||||||||||||||||| ||||||| |||| ||| |||||||||||    
T  43590797 ttgtttttgaccaatgaaaagagagcacaataaaattgtctcaaaa 43590842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 6005047 - 6005103
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| |  |||||||||  | |||||||||||||    
T  6005047 ttgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtaccaaa 6005103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 7129635 - 7129675
Alignment:
Q  41 gttgtttttgaccaatgataagagagaacaacaaagttgtc 81  Q
    |||||||||||||||| | ||||||||| ||||||||||||    
T  7129635 gttgtttttgaccaataagaagagagaaaaacaaagttgtc 7129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 34883285 - 34883325
Alignment:
Q  60 aagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| ||||| ||||||||||||| |||||    
T  34883285 aagagagaacaacaaggttgtatcaaaagttgtactaaaat 34883325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 40459728 - 40459688
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaa 86  Q
    ||||||||||||  ||| |||||||||||||||||||||||    
T  40459728 ttttgaccaatggaaagggagaacaacaaagttgtctcaaa 40459688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 34373111 - 34373172
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  34373111 ttgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttataccaaaatggt 34373172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 38724285 - 38724224
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  38724285 ttgtttttgaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 38724224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 40721874 - 40721935
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  40721874 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 40721935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 4858216 - 4858275
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  4858216 ttgtttttgaccaatgaaaagagagaacaacaaaattgtctcaaaggttgtaccaaaatg 4858275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 43026039 - 43026098
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  43026039 ttgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatg 43026098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 1151632 - 1151690
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  1151632 ttgtttttgaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaat 1151690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 304960 - 304899
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  304960 ttgtttttgaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggt 304899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 13850149 - 13850094
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  13850149 tttttgaccaatgaaaagagagaacaacaaaattgtctcaaaagttataccaaaat 13850094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 27329074 - 27329019
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  27329074 tttttgaccaatgagaaaagagaacaacaaagttgtctcaaaagatgtaccaaaat 27329019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 9377723 - 9377665
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  9377723 tttttgaccaataagaagagagaacaacaaagttgtctcaaaggttataccaaaatggt 9377665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 23141460 - 23141514
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  23141460 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaa 23141514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 23553250 - 23553304
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  23553250 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaa 23553304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 30340100 - 30340154
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  30340100 tttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaa 30340154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 35518378 - 35518436
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||    
T  35518378 ttgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaat 35518436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 25094455 - 25094516
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||| | |||||||||||||||||||||||||||  |||||| ||||||||    
T  25094455 ttgtttttgaccaattagaagagagaacaacaaagttgtctcaaagattgtactaaaatggt 25094516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 43205196 - 43205253
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||||    
T  43205196 ttgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaa 43205253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 11728089 - 11728030
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatg 101  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||  |||||||||||||    
T  11728089 ttgtttttgaccaatgaaaagagaaaacaacaaagttgtcttaaagattgtaccaaaatg 11728030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 37827750 - 37827695
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||    
T  37827750 tttttgaccaatgaaaagagagaacaacaaagttgtcttaaagattgtaccaaaat 37827695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 8757647 - 8757705
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||    
T  8757647 ttgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaat 8757705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 13881198 - 13881255
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||||    
T  13881198 ttgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaa 13881255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 14021323 - 14021380
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||||    
T  14021323 ttgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaa 14021380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 38533166 - 38533109
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| || |||||||||||| |||||| ||||| |||||||||||    
T  38533166 ttgtttttgaccaatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaa 38533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 24727523 - 24727566
Alignment:
Q  60 aagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  24727523 aagagagaacaataaagttgtctcaaaggttgtaccaaaatggt 24727566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 33569690 - 33569728
Alignment:
Q  61 agagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  33569690 agagagaataacaaagttgtctcaaaagttgtaccaaaa 33569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 37064164 - 37064218
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||||||| |||||| |||||||| ||| || |||||||||||||||||    
T  37064164 tttttgaccaatgagaagagaaaacaacaaggttatcccaaaagttgtaccaaaa 37064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 11828788 - 11828731
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||||||| ||||||  |||||||||| |||||    
T  11828788 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaa 11828731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 34141546 - 34141603
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  |||||||||||||  |||||||||||||||||    
T  34141546 ttgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgtaccaaaa 34141603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 35705885 - 35705828
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||  ||||| ||||||||||| |||||    
T  35705885 ttgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaa 35705828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 41156967 - 41156914
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||| ||||||| |||||||| ||||| ||||||||||| |||||    
T  41156967 ttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaa 41156914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 45202100 - 45202043
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||||| |||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  45202100 ttgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 45202043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 3091844 - 3091900
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  3091844 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 3091900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 35008069 - 35008018
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgta 93  Q
    |||| |||||||||||| ||||||| ||||||| |||||| |||||||||||    
T  35008069 ttgtgtttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgta 35008018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 16463395 - 16463449
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtacca 96  Q
    ||||||||||||||| | ||||||| |||||||  ||||| ||||||||||||||    
T  16463395 ttgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgtacca 16463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 19523369 - 19523311
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | |||||||||||| ||| ||||  ||||| ||||||||||||    
T  19523369 ttgtttttgaccaataaaaagagagaacaataaaattgtaccaaaaattgtaccaaaat 19523311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 44484624 - 44484574
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 92  Q
    ||||||||||||||| | ||||||||| |||||||||||| | ||||||||    
T  44484624 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 44484574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 24491645 - 24491588
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    |||||||| |||||| | |||||||||||| ||  ||||||||||||||||| |||||    
T  24491645 ttgtttttaaccaataagaagagagaacaataagattgtctcaaaagttgtatcaaaa 24491588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 27538900 - 27538843
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| |||| || ||||||| |||||| | ||||||||| |||||    
T  27538900 ttgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaaa 27538843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 32755781 - 32755842
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||||| | ||||||||| || || | |||||||||||||||  |||||||||    
T  32755781 ttgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaatggt 32755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 35203717 - 35203660
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| |||| || ||||||| |||||| ||||| ||||| |||||    
T  35203717 ttgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaa 35203660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 11164344 - 11164288
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    |||||||| |||||||| ||||||||| ||  |||||||| ||||||||||| ||||    
T  11164344 ttgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 11164288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 13711164 - 13711216
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtac 94  Q
    |||||||| |||||||| ||||||||| ||  |||||||| ||||||||||||    
T  13711164 ttgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtac 13711216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 27529630 - 27529686
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 98  Q
    ||||||||||||||||| |||| || ||||||| |||||| | ||||||||| ||||    
T  27529630 ttgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaa 27529686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 34976723 - 34976780
Alignment:
Q  46 ttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 103  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  34976723 ttttgaccaatgagaagagagaacaacaaagttatctcaaaggttgtaccaaaatggt 34976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 608629 - 608571
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  608629 ttgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaat 608571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 22422253 - 22422311
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  22422253 ttgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaat 22422311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 3335423 - 3335366
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatgg 102  Q
    ||||| |||||||| |||||||||||||||||||||||||||  ||||| ||||||||    
T  3335423 ttttttaccaatgaaaagagagaacaacaaagttgtctcaaatattgtatcaaaatgg 3335366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 7304073 - 7304016
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||||| |||||    
T  7304073 ttgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaa 7304016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 9395305 - 9395248
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||||||||||| |||||    
T  9395305 ttgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgtagcaaaa 9395248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 6997516 - 6997461
Alignment:
Q  44 gtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  6997516 gtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 6997461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 2165268 - 2165211
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||| ||| |||||| ||||||||||| |||||    
T  2165268 ttgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 2165211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 2176901 - 2176844
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||| ||| |||||| ||||||||||| |||||    
T  2176901 ttgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 2176844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 12151825 - 12151787
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgt 80  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  12151825 ttgtttttgaccaataagaagagagaacaacaaagttgt 12151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 10557512 - 10557569
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||  ||||  ||||||||||| |||||    
T  10557512 ttgtttttgaccaatgaaaagagagtacaacaagattgttccaaaagttgtagcaaaa 10557569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 32135405 - 32135348
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||||||  |||||  |||||||||| |||||    
T  32135405 ttgtttttgaccaatgaaaagagagcacaacaagattgtcctaaaagttgtagcaaaa 32135348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 16865635 - 16865671
Alignment:
Q  45 tttttgaccaatgataagagagaacaacaaagttgtc 81  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  16865635 tttttgaccaatgaaaagagagcacaacaaagttgtc 16865671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 54630 - 54572
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaat 100  Q
    ||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||||    
T  54630 ttgtttttgaccaataaaaagagagaacaacaaagttgtctcaaagattgtaccaaaat 54572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 3046 - 3103
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||||    
T  3046 ttgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaa 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 17141 - 17198
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||||| ||||||| ||| ||| |||||| ||||||||||| |||||    
T  17141 ttgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 17198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 145150 - 145207
Alignment:
Q  42 ttgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 99  Q
    ||||||||||||||| | ||||||  ||||||| |||||| |||||||||||||||||    
T  145150 ttgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaa 145207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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