View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19058_high_66 (Length: 263)

Name: NF19058_high_66
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19058_high_66
NF19058_high_66
[»] chr4 (39 HSPs)
chr4 (10-259)||(49242055-49242306)
chr4 (126-259)||(43771129-43771262)
chr4 (129-259)||(24834584-24834714)
chr4 (118-259)||(39471152-39471293)
chr4 (119-260)||(49077245-49077386)
chr4 (136-258)||(47009202-47009324)
chr4 (129-258)||(8108962-8109091)
chr4 (133-258)||(50164405-50164530)
chr4 (134-259)||(722168-722293)
chr4 (134-259)||(754624-754749)
chr4 (129-249)||(20454546-20454664)
chr4 (132-252)||(33995986-33996106)
chr4 (120-252)||(34129451-34129583)
chr4 (120-258)||(33653534-33653672)
chr4 (132-259)||(10169689-10169814)
chr4 (120-259)||(20225385-20225522)
chr4 (133-252)||(46287451-46287570)
chr4 (158-252)||(5044591-5044685)
chr4 (120-196)||(40991696-40991772)
chr4 (174-259)||(45310992-45311077)
chr4 (120-233)||(50571861-50571974)
chr4 (129-252)||(48339391-48339514)
chr4 (164-259)||(50481589-50481684)
chr4 (132-206)||(47237838-47237912)
chr4 (132-247)||(46242000-46242113)
chr4 (129-232)||(39016669-39016772)
chr4 (164-250)||(52671871-52671957)
chr4 (129-234)||(2088734-2088839)
chr4 (164-241)||(2860918-2860995)
chr4 (120-221)||(22592301-22592402)
chr4 (116-168)||(24834715-24834767)
chr4 (165-257)||(26361354-26361446)
chr4 (182-258)||(50652381-50652457)
chr4 (164-259)||(24938459-24938554)
chr4 (174-249)||(31250937-31251012)
chr4 (174-252)||(41153249-41153327)
chr4 (120-170)||(53870996-53871046)
chr4 (147-252)||(49682842-49682947)
chr4 (133-221)||(29699499-29699587)
[»] chr3 (47 HSPs)
chr3 (112-259)||(28529242-28529387)
chr3 (120-259)||(20493489-20493628)
chr3 (118-259)||(37776747-37776888)
chr3 (120-258)||(52124001-52124139)
chr3 (129-250)||(40715915-40716036)
chr3 (129-259)||(41451939-41452069)
chr3 (114-259)||(29755491-29755636)
chr3 (132-259)||(48351445-48351572)
chr3 (129-259)||(24734711-24734841)
chr3 (120-233)||(5452130-5452243)
chr3 (133-250)||(22604570-22604687)
chr3 (120-259)||(46160946-46161083)
chr3 (133-252)||(41707490-41707609)
chr3 (129-231)||(30624639-30624739)
chr3 (118-252)||(55452066-55452198)
chr3 (174-252)||(19345051-19345129)
chr3 (138-252)||(26310497-26310611)
chr3 (118-232)||(46237117-46237231)
chr3 (119-259)||(46450063-46450202)
chr3 (174-259)||(18427194-18427279)
chr3 (129-231)||(27243051-27243153)
chr3 (119-233)||(45515565-45515679)
chr3 (129-258)||(20791302-20791431)
chr3 (130-231)||(50661594-50661695)
chr3 (132-259)||(8825023-8825150)
chr3 (133-252)||(10948611-10948730)
chr3 (187-252)||(24429076-24429142)
chr3 (175-252)||(49072057-49072134)
chr3 (148-252)||(14236044-14236148)
chr3 (132-231)||(46575957-46576056)
chr3 (130-259)||(50156704-50156831)
chr3 (133-186)||(13639412-13639465)
chr3 (129-226)||(13809088-13809184)
chr3 (124-185)||(24748908-24748969)
chr3 (174-259)||(29588777-29588862)
chr3 (154-259)||(38414678-38414783)
chr3 (120-185)||(52951478-52951543)
chr3 (153-249)||(138793-138889)
chr3 (174-249)||(41607462-41607537)
chr3 (114-160)||(27243191-27243237)
chr3 (210-248)||(29388649-29388687)
chr3 (152-259)||(43016440-43016549)
chr3 (132-221)||(37600212-37600301)
chr3 (129-213)||(29389103-29389187)
chr3 (218-250)||(30355183-30355215)
chr3 (129-185)||(44844102-44844158)
chr3 (132-232)||(54140964-54141064)
[»] chr6 (28 HSPs)
chr6 (129-259)||(34905342-34905472)
chr6 (118-259)||(445813-445954)
chr6 (126-252)||(10133209-10133335)
chr6 (133-252)||(5106308-5106427)
chr6 (131-259)||(31116168-31116296)
chr6 (119-232)||(35128794-35128907)
chr6 (132-248)||(32122804-32122920)
chr6 (133-231)||(13001702-13001800)
chr6 (133-259)||(1392640-1392763)
chr6 (166-257)||(12780805-12780896)
chr6 (120-250)||(12753813-12753943)
chr6 (127-252)||(2675899-2676024)
chr6 (178-259)||(16852017-16852098)
chr6 (129-249)||(31443965-31444085)
chr6 (168-259)||(32112761-32112852)
chr6 (132-258)||(21987301-21987427)
chr6 (165-259)||(12784983-12785077)
chr6 (114-232)||(19090286-19090404)
chr6 (146-231)||(4595765-4595850)
chr6 (120-232)||(10060856-10060968)
chr6 (142-206)||(12690271-12690335)
chr6 (201-249)||(32599002-32599050)
chr6 (129-232)||(12794885-12794988)
chr6 (115-185)||(8441955-8442025)
chr6 (115-185)||(8450759-8450829)
chr6 (152-250)||(17144724-17144822)
chr6 (116-186)||(32439469-32439539)
chr6 (129-178)||(10060987-10061036)
[»] chr2 (41 HSPs)
chr2 (129-259)||(34142183-34142313)
chr2 (133-259)||(38464173-38464299)
chr2 (115-252)||(26767812-26767949)
chr2 (129-259)||(9470087-9470217)
chr2 (129-252)||(44274241-44274363)
chr2 (120-252)||(36471889-36472021)
chr2 (136-259)||(10981531-10981654)
chr2 (118-259)||(12989186-12989327)
chr2 (132-252)||(30718378-30718497)
chr2 (118-259)||(32856179-32856324)
chr2 (168-259)||(472207-472298)
chr2 (137-259)||(19639107-19639229)
chr2 (137-259)||(19837700-19837822)
chr2 (119-259)||(11539419-11539562)
chr2 (118-257)||(18511255-18511394)
chr2 (139-252)||(25238328-25238445)
chr2 (129-259)||(6980164-6980294)
chr2 (129-249)||(3804590-3804711)
chr2 (190-259)||(7919314-7919383)
chr2 (132-233)||(24497201-24497302)
chr2 (129-258)||(45554573-45554694)
chr2 (131-222)||(8009521-8009612)
chr2 (192-258)||(15884498-15884564)
chr2 (147-227)||(42579733-42579813)
chr2 (119-234)||(15508910-15509025)
chr2 (129-252)||(37652296-37652419)
chr2 (129-232)||(42182895-42182998)
chr2 (132-252)||(17188076-17188194)
chr2 (140-252)||(25730490-25730602)
chr2 (118-234)||(28898106-28898222)
chr2 (132-252)||(45270607-45270726)
chr2 (129-252)||(16719481-16719604)
chr2 (129-226)||(37228504-37228602)
chr2 (134-191)||(19190641-19190698)
chr2 (120-259)||(12098910-12099050)
chr2 (129-208)||(2122801-2122880)
chr2 (132-199)||(25666697-25666764)
chr2 (118-233)||(41546098-41546212)
chr2 (120-226)||(1110195-1110301)
chr2 (118-176)||(19193495-19193553)
chr2 (136-206)||(43400146-43400216)
[»] chr7 (38 HSPs)
chr7 (120-259)||(31502508-31502647)
chr7 (120-259)||(27888279-27888418)
chr7 (129-259)||(14795137-14795267)
chr7 (129-259)||(15242129-15242259)
chr7 (118-252)||(22189934-22190068)
chr7 (140-252)||(44350853-44350965)
chr7 (132-240)||(44510999-44511107)
chr7 (129-258)||(12263481-12263610)
chr7 (119-252)||(33008100-33008233)
chr7 (132-259)||(27949282-27949409)
chr7 (133-259)||(32212914-32213039)
chr7 (129-259)||(39254089-39254219)
chr7 (129-258)||(11824077-11824206)
chr7 (129-259)||(46517299-46517427)
chr7 (120-259)||(32205076-32205212)
chr7 (129-258)||(36845567-36845695)
chr7 (116-232)||(22786144-22786260)
chr7 (129-252)||(19422885-19423008)
chr7 (119-252)||(6442161-6442294)
chr7 (153-250)||(11692209-11692306)
chr7 (176-249)||(32605384-32605457)
chr7 (142-226)||(7775019-7775103)
chr7 (120-232)||(17354598-17354710)
chr7 (132-259)||(10934009-10934136)
chr7 (120-171)||(42863566-42863617)
chr7 (129-231)||(24539195-24539297)
chr7 (119-259)||(6580046-6580189)
chr7 (178-258)||(25686880-25686960)
chr7 (129-232)||(13919786-13919889)
chr7 (149-221)||(41873460-41873532)
chr7 (133-252)||(7459353-7459472)
chr7 (148-231)||(17749719-17749802)
chr7 (129-207)||(1687990-1688067)
chr7 (124-178)||(46994361-46994415)
chr7 (120-185)||(2520630-2520695)
chr7 (129-178)||(20954807-20954856)
chr7 (132-189)||(31959971-31960028)
chr7 (119-234)||(12270984-12271096)
[»] chr8 (35 HSPs)
chr8 (120-259)||(16983391-16983530)
chr8 (120-252)||(1977224-1977356)
chr8 (120-259)||(8914768-8914907)
chr8 (129-259)||(8903858-8903988)
chr8 (129-259)||(32072103-32072233)
chr8 (147-259)||(17499277-17499389)
chr8 (132-252)||(28413920-28414040)
chr8 (140-258)||(9952802-9952920)
chr8 (136-259)||(7493386-7493514)
chr8 (130-259)||(24055969-24056098)
chr8 (129-248)||(5979886-5980005)
chr8 (129-257)||(23685137-23685265)
chr8 (120-259)||(43506535-43506671)
chr8 (133-231)||(35689490-35689588)
chr8 (147-259)||(6098821-6098931)
chr8 (147-259)||(36804883-36804995)
chr8 (120-226)||(34861264-34861368)
chr8 (129-250)||(35151782-35151903)
chr8 (154-262)||(35797426-35797534)
chr8 (201-248)||(9192079-9192126)
chr8 (167-233)||(13214539-13214605)
chr8 (132-249)||(17716862-17716977)
chr8 (133-259)||(31301125-31301250)
chr8 (130-231)||(13407396-13407497)
chr8 (134-199)||(18413555-18413620)
chr8 (133-259)||(45246442-45246570)
chr8 (132-252)||(41727439-41727559)
chr8 (129-232)||(1205833-1205936)
chr8 (129-252)||(11962733-11962855)
chr8 (151-222)||(28211967-28212038)
chr8 (129-252)||(4674917-4675035)
chr8 (129-233)||(4319803-4319907)
chr8 (120-216)||(7599509-7599605)
chr8 (168-228)||(10868036-10868096)
chr8 (120-160)||(34952458-34952498)
[»] chr1 (52 HSPs)
chr1 (132-259)||(26980306-26980433)
chr1 (116-252)||(49730857-49730993)
chr1 (129-259)||(10659812-10659943)
chr1 (132-259)||(11987635-11987762)
chr1 (129-259)||(8899020-8899150)
chr1 (129-233)||(28218118-28218222)
chr1 (120-259)||(6133669-6133807)
chr1 (120-210)||(25543337-25543427)
chr1 (129-259)||(8741267-8741399)
chr1 (142-259)||(37552993-37553110)
chr1 (120-252)||(931371-931503)
chr1 (139-259)||(33193066-33193186)
chr1 (129-252)||(3872685-3872807)
chr1 (176-259)||(30678955-30679038)
chr1 (129-258)||(19101646-19101775)
chr1 (129-259)||(35336872-35336996)
chr1 (119-259)||(41958081-41958219)
chr1 (129-257)||(22540374-22540502)
chr1 (129-232)||(41095680-41095783)
chr1 (118-232)||(11135734-11135848)
chr1 (147-252)||(29673499-29673604)
chr1 (134-206)||(18157049-18157121)
chr1 (132-246)||(27570234-27570348)
chr1 (118-232)||(32848654-32848768)
chr1 (152-234)||(36566925-36567007)
chr1 (168-246)||(39499349-39499427)
chr1 (182-248)||(39499453-39499519)
chr1 (120-185)||(13388331-13388396)
chr1 (141-206)||(14341018-14341083)
chr1 (132-257)||(15523219-15523344)
chr1 (132-257)||(15531213-15531338)
chr1 (120-249)||(44271915-44272044)
chr1 (147-259)||(32211828-32211940)
chr1 (139-259)||(41948190-41948310)
chr1 (120-258)||(2225223-2225359)
chr1 (141-232)||(14094072-14094163)
chr1 (129-232)||(41918001-41918104)
chr1 (129-231)||(13114742-13114844)
chr1 (191-249)||(15468288-15468346)
chr1 (129-259)||(27794160-27794290)
chr1 (129-259)||(33059937-33060066)
chr1 (129-250)||(743425-743546)
chr1 (147-252)||(15928579-15928684)
chr1 (132-245)||(31074725-31074838)
chr1 (151-228)||(50773186-50773263)
chr1 (120-232)||(44739115-44739227)
chr1 (198-249)||(15906485-15906536)
chr1 (129-252)||(33113977-33114100)
chr1 (124-178)||(50424864-50424918)
chr1 (134-203)||(28274797-28274866)
chr1 (154-259)||(37525560-37525665)
chr1 (129-185)||(39039473-39039529)
[»] chr5 (34 HSPs)
chr5 (165-258)||(41330438-41330531)
chr5 (120-259)||(28490766-28490905)
chr5 (120-259)||(34368357-34368496)
chr5 (138-252)||(4714764-4714878)
chr5 (178-252)||(25919266-25919340)
chr5 (118-259)||(17537146-17537287)
chr5 (147-226)||(32050331-32050410)
chr5 (120-259)||(39246605-39246744)
chr5 (129-258)||(30325919-30326048)
chr5 (164-252)||(5413788-5413876)
chr5 (133-259)||(27592496-27592622)
chr5 (132-249)||(28611832-28611949)
chr5 (120-232)||(4959275-4959387)
chr5 (147-258)||(28434863-28434972)
chr5 (132-249)||(2525583-2525700)
chr5 (119-232)||(42224662-42224775)
chr5 (130-258)||(1923597-1923725)
chr5 (131-247)||(34384747-34384863)
chr5 (129-259)||(10142020-10142148)
chr5 (178-252)||(36337941-36338015)
chr5 (133-259)||(37455359-37455484)
chr5 (179-252)||(28090280-28090353)
chr5 (141-205)||(36494241-36494306)
chr5 (134-194)||(1649561-1649621)
chr5 (112-252)||(25630796-25630936)
chr5 (147-259)||(41105614-41105726)
chr5 (182-226)||(43541910-43541954)
chr5 (164-259)||(43405434-43405529)
chr5 (149-223)||(31542323-31542397)
chr5 (120-178)||(40971447-40971505)
chr5 (116-185)||(6264002-6264071)
chr5 (153-221)||(10253164-10253232)
chr5 (129-252)||(28223827-28223950)
chr5 (212-252)||(31885882-31885922)
[»] scaffold0543 (1 HSPs)
scaffold0543 (147-259)||(9688-9800)
[»] scaffold0492 (1 HSPs)
scaffold0492 (147-259)||(11234-11346)
[»] scaffold0018 (1 HSPs)
scaffold0018 (174-259)||(27863-27948)
[»] scaffold0016 (1 HSPs)
scaffold0016 (159-252)||(204759-204852)
[»] scaffold0204 (1 HSPs)
scaffold0204 (149-252)||(26913-27016)
[»] scaffold0838 (1 HSPs)
scaffold0838 (138-249)||(2237-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (138-249)||(2268-2377)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 49242055 - 49242306
Alignment:
Q  10 attatactcactgaattcttatttataagactctcacacnnnnnnnn-atgtatgttgagaaaaattgatagtgtaattaatgtgtactctcgcacnnnn 108  Q
    |||||||||||| ||||||||||||||||||||||||||         |||||| |||| |||||||||||||||||||||||||||||||| |||        
T  49242055 attatactcactcaattcttatttataagactctcacactttttttttatgtatattgaaaaaaattgatagtgtaattaatgtgtactctcacactttt 49242154  T
Q  109 nnn-atttatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttg 207  Q
        |||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  49242155 ttttatttatatgaggagtgttaggaacactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttg 49242254  T
Q  208 tgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  49242255 tgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagag 49242306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 43771129 - 43771262
Alignment:
Q  126 tggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaa 225  Q
    |||||||||||||||||||| |||||||||||||  | ||||| ||| |||||||||||| ||| |||||| || |||| ||||||||||||||||||||    
T  43771129 tggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaa 43771228  T
Q  226 aatgtagattcacaatgatttaaaccactaagag 259  Q
    | ||||||  ||||||||||||||||| ||||||    
T  43771229 agtgtagacccacaatgatttaaaccaataagag 43771262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 24834584 - 24834714
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||||||||  ||||||||||||||  |||| |||| |||||||| ||| ||| |||||| || || ||||||||||||||||||||||| |    
T  24834584 tagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagt 24834683  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  |||||| |||||||||| ||||||    
T  24834684 gtagacccacaataatttaaaccaataagag 24834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 39471152 - 39471293
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || |||||||||||||||||||| ||||||| |||||   ||| ||| ||| |||||||| ||| |||||| || |||||||||| ||||||    
T  39471152 atgaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttca 39471251  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    || |||||| ||||||  ||||||||||||||||| ||||||    
T  39471252 atcttcaaagtgtagacccacaatgatttaaaccaataagag 39471293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 49077245 - 49077386
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || |||||||||||| |||| |||| ||||| || || ||| | ||| ||| ||| ||||||||||||||| || ||||||||||||||||||    
T  49077245 tgaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaa 49077344  T
Q  219 ttttcaaaatgtagattcacaatgatttaaaccactaagagt 260  Q
    |||| ||| ||||||  ||||||||||||||||| |||||||    
T  49077345 tttttaaagtgtagacccacaatgatttaaaccaataagagt 49077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 47009202 - 47009324
Alignment:
Q  136 actcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagatt 235  Q
    ||||| |||| |||||||| |||| || ||||| ||| ||||||| |||||||| | ||||||| | ||||||||| |||||||||||||| |||||||     
T  47009202 actcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagata 47009301  T
Q  236 cacaatgatttaaaccactaaga 258  Q
    ||||||||||||||||| |||||    
T  47009302 cacaatgatttaaaccaataaga 47009324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 8108962 - 8109091
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||| ||||| |||||| ||| |||||| ||  | |||||||  |||||||||||||| |    
T  8108962 tagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagt 8109061  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    |||||  ||||||||||||||||| |||||    
T  8109062 gtagacccacaatgatttaaaccaataaga 8109091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 50164405 - 50164530
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| ||||||||||||| || |||||  || ||||||| |||| ||| ||| || || || |||||| |||||||||||||||| |||||    
T  50164405 aacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtag 50164504  T
Q  233 attcacaatgatttaaaccactaaga 258  Q
    | |||||||||||||||||| |||||    
T  50164505 actcacaatgatttaaaccaataaga 50164530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 722168 - 722293
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtaga 233  Q
    |||||||  ||| ||||||||||||| || ||||||||| |||||||||||| ||  |||||| || ||||||||||  |||||||||| ||| ||||||    
T  722168 acactcatctttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 722267  T
Q  234 ttcacaatgatttaaaccactaagag 259  Q
      ||||||||||||||||| ||||||    
T  722268 cccacaatgatttaaaccaataagag 722293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 259
Target Start/End: Complemental strand, 754749 - 754624
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtaga 233  Q
    ||||| |||||| |||||| ||||||||| ||||||||| |||||||||| | ||  |||||| || ||||||||||  |||||||||| ||| ||||||    
T  754749 acacttacttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 754650  T
Q  234 ttcacaatgatttaaaccactaagag 259  Q
      ||||||||||||||||| ||||||    
T  754649 cccacaatgatttaaaccaataagag 754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 20454546 - 20454664
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||| |||||| ||||||||||||| || ||||| ||| ||| ||| |||| ||| |||||| || |||||||||| ||||||||||||||| |    
T  20454546 tagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtc-ca-cactttgtgttggttcaattttcaaagt 20454643  T
Q  229 gtagattcacaatgatttaaa 249  Q
    |||||| ||||||||||||||    
T  20454644 gtagatccacaatgatttaaa 20454664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 33996106 - 33995986
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||| ||||| ||||| |||||||||| ||||| ||| |||  || |||| ||| ||||||||| |||||| ||||||||||||||||||||| ||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaattta 33996007  T
Q  232 gattcacaatgatttaaacca 252  Q
     | |||||||| |||||||||    
T  33996006 aactcacaatggtttaaacca 33995986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 34129583 - 34129451
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| ||||||||||| |||||||| || |||||||||| || ||||| ||  ||||||||| || ||| ||| || || ||||||||||| |||||||    
T  34129583 gaggaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaat 34129484  T
Q  220 tttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||| ||| || |||||||| |||||||||    
T  34129483 tttcaaagtgtggactcacaatggtttaaacca 34129451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 33653672 - 33653534
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||||||| |||| |||||||||||||  | |||||  || ||| |||||||| ||| |||||| || || |||||| || ||||||    
T  33653672 gaggaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaat 33653573  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    ||||||||| | ||| ||||||||||||||||| |||||    
T  33653572 tttcaaaatattgatccacaatgatttaaaccaataaga 33653534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 10169814 - 10169689
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| |||||||| ||||||||||  || | ||||| | | |||||||||||| ||||||||||  | ||||||||||| |||||||||||||||  ||    
T  10169814 caacattcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacata 10169717  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
    ||| |||||| |||||||||| ||||||    
T  10169716 gatccacaattatttaaaccaataagag 10169689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 20225522 - 20225385
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| ||||||||||  | || ||||| ||| |||||||| |||  ||  ||||| || |||||| ||||||||| ||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    || |||| |||||| |||||||||||||||||| ||||||    
T  20225424 ttccaaagtgtagactcacaatgatttaaaccaataagag 20225385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 46287451 - 46287570
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| || | | | |||| || | ||| ||| |||||||||||||||||||||||| |  ||||||||||  ||||||||||||| ||| |    
T  46287451 aacactcacttttcaatattttttctagcacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttg 46287550  T
Q  233 attcacaatgatttaaacca 252  Q
    | ||||||||||||||||||    
T  46287551 actcacaatgatttaaacca 46287570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 5044685 - 5044591
Alignment:
Q  158 taacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||| ||||||||| |||||||||||| |||||||||| ||  | |||||||| |||||||||| ||||||||||  ||||| |||||||||||    
T  5044685 taacattcacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaacca 5044591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 40991772 - 40991696
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtc 196  Q
    ||||| || ||||||||||||||||| ||||||||||||| || ||||| ||| |||||||||||| ||||||||||    
T  40991772 gaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtc 40991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 45311077 - 45310992
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||||||| |||||||||| || ||||||||| || ||||||||||||| || ||| | ||||||||||||| || ||||||    
T  45311077 attggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagag 45310992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 50571861 - 50571974
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||| |||||||| ||||||||||||| || | ||| ||| ||| |||||||| ||| |||| | ||||| ||| ||||| ||||||    
T  50571861 gaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaat 50571960  T
Q  220 tttcaaaatgtaga 233  Q
    ||||||| ||||||    
T  50571961 tttcaaagtgtaga 50571974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 48339514 - 48339391
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||||| || | |||||||| ||||| ||||| | | ||||||  |||| ||| |||||  || ||||||||||||||||||||||||||      
T  48339514 tagcaacactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagc 48339415  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||  || |||| |||||||||    
T  48339414 gtagacccataatgctttaaacca 48339391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 50481684 - 50481589
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||| ||| |||||||||||| ||  ||||||||| |||||||| ||| ||| ||||||||| ||||||  |||||| |||||||||| ||||||    
T  50481684 tcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagag 50481589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 47237912 - 47237838
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt 206  Q
    |||||||| ||||| ||||||||||||| || ||||| ||| |||||||||||| |||||||||| || ||||||    
T  47237912 caacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccacttt 47237838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 46242113 - 46242000
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| ||||||||||  |||   |||||||  || ||||||||| | | |||||| || || ||||||| ||||||||||||||||| ||    
T  46242113 caacactcactttttaacactctctagaactcacactttt--atgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatata 46242016  T
Q  232 gattcacaatgattta 247  Q
    ||  ||||||||||||    
T  46242015 gacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 39016669 - 39016772
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| || |||||||||||||||| ||||| | ||| ||| |||||||||||| ||| |||||| || || |||  |||||||| |||| |||| |    
T  39016669 tagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagt 39016768  T
Q  229 gtag 232  Q
    ||||    
T  39016769 gtag 39016772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 52671871 - 52671957
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaac 250  Q
    ||||||||| |||||||||||| ||| |||||| || || ||| |||  |||||||||| ||| |||| |||| |||||||||||||    
T  52671871 tcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaac 52671957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 2088839 - 2088734
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||  |||| |  ||||||||||||| ||||| ||||||||  |||||| ||| |||||| || |||||| ||||| ||| |||| |||| |    
T  2088839 tagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagt 2088740  T
Q  229 gtagat 234  Q
    ||||||    
T  2088739 gtagat 2088734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 2860918 - 2860995
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaat 241  Q
    |||||||||  ||||||||||||||| ||| |  |||| |||| ||||| ||||||||||||| ||||||| ||||||    
T  2860918 tcacttttttgttggatgaaattaatgtattttccatccctttctgtggattcaattttcaaagtgtagatccacaat 2860995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 22592301 - 22592402
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||| ||||||||| |||| |||||||  || ||||| ||| |||||||||||| ||| | |||| || |||||||||| ||||| ||    
T  22592301 gaggattgatagcaacgctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctat 22592400  T
Q  220 tt 221  Q
    ||    
T  22592401 tt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 24834767 - 24834715
Alignment:
Q  116 atatgaggagtggtagcaacactcacttttaaacactctctctaacagtcact 168  Q
    ||||||||| || ||||||||||| ||||||||| |||||||||| |||||||    
T  24834767 atatgaggaatgctagcaacactctcttttaaactctctctctaatagtcact 24834715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 26361446 - 26361354
Alignment:
Q  165 cactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaag 257  Q
    |||| ||| |||||||||| | ||| |||| | || || |||||||||||||||| |||||| ||||||  || |||||||||||||| ||||    
T  26361446 cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataag 26361354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 50652457 - 50652381
Alignment:
Q  182 aaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    |||| ||| ||| ||||| |||||||||| ||||||||||||||||||||||   ||||| ||||||| || |||||    
T  50652457 aaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataaga 50652381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 24938554 - 24938459
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||| ||| |||||||| ||| ||| |||||| || || ||||| ||| ||||||||| ||| ||||||   |||||||||||||||| ||||||    
T  24938554 tcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagag 24938459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 31251012 - 31250937
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    |||||||||||| ||| |||||| || || ||| ||   |||||||||||||||||||||  ||||||||||||||    
T  31251012 attggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaa 31250937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 41153327 - 41153249
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||||||| ||  ||||| || |||||||||| ||||| ||||  ||| |||| ||||||||||||||| ||||    
T  41153327 attggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttagacca 41153249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 53871046 - 53870996
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcacttt 170  Q
    ||||| || ||||||||||||||||  |||||||||||||||| |||||||    
T  53871046 gaggaatgctagcaacactcactttccaacactctctctaacactcacttt 53870996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 49682947 - 49682842
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||| ||| || || ||||||||| || ||||||||| ||| ||| ||||| |||||| | ||  ||||||||||||| ||||||  ||||  |||||    
T  49682947 aacactttctttagcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgattt 49682848  T
Q  247 aaacca 252  Q
    ||||||    
T  49682847 aaacca 49682842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 221
Target Start/End: Original strand, 29699499 - 29699587
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattt 221  Q
    ||||| ||||||| || || || |||| || ||||| ||| |||||||||||| |||| ||||| || |||||||||| ||||| ||||    
T  29699499 aacacccacttttgaataccctttctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctattt 29699587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 28529242 - 28529387
Alignment:
Q  112 atttatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtg 211  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||| || ||||| ||| |||||||||||| ||| |||||| || |||  ||||||    
T  28529242 atttatatgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccac--tgtgtg 28529339  T
Q  212 ggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  28529340 ggttcaattttcaaagtgtagacccacaatgatttaaaccaataagag 28529387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 20493628 - 20493489
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||||||||||||||| |||||  || |||||||||||| ||| ||||||  | ||||||||| |||||||||    
T  20493628 gaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaat 20493529  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
     |||||| ||||||  ||||||||||||||||| ||||||    
T  20493528 attcaaagtgtagacccacaatgatttaaaccaataagag 20493489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 37776888 - 37776747
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||||||||||||||| |||||| |||| | || ||||| ||| ||| |||||||| ||| ||||||  | |||||||||||||||||    
T  37776888 atgaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttca 37776789  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||| ||||||   |||||||||||||||||||||||    
T  37776788 attttcaaagtgtagacctacaatgatttaaaccactaagag 37776747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 52124139 - 52124001
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| ||| ||||||||| || |||||| ||  ||||||||||||||| |||||| ||  | |||||| |||||||||    
T  52124139 gaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaat 52124040  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    ||||||| ||||||  ||||||||||||||||| |||||    
T  52124039 tttcaaagtgtagacccacaatgatttaaaccaataaga 52124001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 40716036 - 40715915
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||| ||  | |||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  40716036 tagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaatttttaaaat 40715937  T
Q  229 gtagattcacaatgatttaaac 250  Q
    || ||   ||||||||||||||    
T  40715936 gttgacatacaatgatttaaac 40715915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 41452069 - 41451939
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||||  ||||||  | ||||| ||| |||||||||||| ||  |||||| || ||||||||||||||||||||||||||      
T  41452069 tagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaaga 41451970  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  ||||||||||||||||| ||||||    
T  41451969 gtagacccacaatgatttaaaccaataagag 41451939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 29755491 - 29755636
Alignment:
Q  114 ttatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtggg 213  Q
    |||| |||||| || ||||||||||||||||| |||| ||||| |||||  |||| ||| || | ||  ||| ||||||||| |||  ||||||||||||    
T  29755491 ttatttgaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtggg 29755590  T
Q  214 ttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||||||| |||||||  |||||||||||||||| ||||||    
T  29755591 ttcaattttcaaagtgtagatcaacaatgatttaaaccaataagag 29755636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 48351445 - 48351572
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||||| |||| |||||||||| ||| |  |||| ||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||||| ||||    
T  48351445 caacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgta 48351544  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
     || || ||||||||||| || ||||||    
T  48351545 tatccataatgatttaaatcaataagag 48351572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 24734711 - 24734841
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||||  ||||||  | ||||| ||| |||||||||||| ||  |||||| || ||||||||||||||||||||||||||      
T  24734711 tagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaaga 24734810  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||||   ||||||||||||||||| ||||||    
T  24734811 gtaggcccacaatgatttaaaccaataagag 24734841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 233
Target Start/End: Complemental strand, 5452243 - 5452130
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||||||||| ||||| ||||| ||| |||||||||||| ||| ||| || || |||||||||||| ||||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  220 tttcaaaatgtaga 233  Q
    |||| || ||||||    
T  5452143 tttctaagtgtaga 5452130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 22604570 - 22604687
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    |||||| |||||| || ||||||| ||||| |||||  || ||||||| |||||||| |||||| || || |||||| | ||||||||||||||||||||    
T  22604570 aacacttactttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtag 22604669  T
Q  233 attcacaatgatttaaac 250  Q
    | ||||||||||||||||    
T  22604670 actcacaatgatttaaac 22604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 46160946 - 46161083
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| ||||||||||  | || ||||| ||| |||||||||||| |||| |||||  | |||||||||| ||||| ||    
T  46160946 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctat 46161043  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    || |||| ||||||| || |||||||||||||| ||||||    
T  46161044 ttccaaagtgtagatccataatgatttaaaccaataagag 46161083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 41707609 - 41707490
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    |||| |||||||| | |||||||||||||| ||||| | | ||||||| |||| ||| ||||| |||||||||||||||||||||||||| ||| | |||    
T  41707609 aacattcacttttgagcactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatag 41707510  T
Q  233 attcacaatgatttaaacca 252  Q
    |  |||||| ||||||||||    
T  41707509 acccacaataatttaaacca 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 30624639 - 30624739
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| | ||||||||  |||| ||||| ||| |||| || |||||||| ||||| ||| ||||||||||| ||||||||||||||||    
T  30624639 tagcaacactcacttttgagcactctct--aacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaattttcaaaat 30624736  T
Q  229 gta 231  Q
    |||    
T  30624737 gta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 55452198 - 55452066
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||||||||||||||| ||||||||||   ||  ||||| ||| |||||||| |||  || |||||| || ||||||||||||||||     
T  55452198 atgaggaatgttagcaacactcacttttgaacactctctggtac--tcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttct 55452101  T
Q  218 attttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||| |||| |||||| ||| ||||||||||||||    
T  55452100 atttccaaagtgtagactcataatgatttaaacca 55452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 19345129 - 19345051
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||||||| ||| |||||| || ||||||||  |||||||||||||||| |||||| ||||||||||||||||||    
T  19345129 attggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaacca 19345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 26310611 - 26310497
Alignment:
Q  138 tcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattca 237  Q
    |||||||| ||||||||||||| || | ||| ||| |||||||||||| ||| |||||| || || ||| ||| ||||||||||||||| ||||||  ||    
T  26310611 tcacttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagaccca 26310512  T
Q  238 caatgatttaaacca 252  Q
     ||||||||||||||    
T  26310511 taatgatttaaacca 26310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 46237231 - 46237117
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||| |||| ||||||||||| ||||| | ||||||||||| || ||||| ||| |||||||||||| ||| |||||| || |||||| |||||||||     
T  46237231 atgagaagtgttagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttcc 46237132  T
Q  218 attttcaaaatgtag 232  Q
    ||||  |||||||||    
T  46237131 atttctaaaatgtag 46237117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 259
Target Start/End: Original strand, 46450063 - 46450202
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt-gtgtgggttca 217  Q
    |||||| || ||||||||||||||||| ||||||||||  | || ||||| ||| ||| |||| ||| ||| |||||| || |||||| ||||||||||     
T  46450063 tgaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttct 46450160  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||| |||| ||||||  ||||||||||||||||| ||||||    
T  46450161 atttgcaaagtgtagacccacaatgatttaaaccaataagag 46450202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 18427279 - 18427194
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||||||| ||| |||||| || || ||||||||||||| ||||||||| ||||||  ||||||||||||||||| ||||||    
T  18427279 attggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagag 18427194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 27243051 - 27243153
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| |||||||||||||||| ||||| ||| ||||||| |||| |||  ||||| || |||||| ||||||||| |||| |||| |    
T  27243051 tagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagt 27243150  T
Q  229 gta 231  Q
    |||    
T  27243151 gta 27243153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 45515679 - 45515565
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || || |||| ||||||||| ||||||||||| |||| ||||| ||| |||||||||||| ||| ||| || ||||||   ||||| ||||||    
T  45515679 tgaggaatgttaacaacgctcactttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatcacagagtgtgagttcaa 45515580  T
Q  219 ttttcaaaatgtaga 233  Q
    |||||||| ||||||    
T  45515579 ttttcaaagtgtaga 45515565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 20791302 - 20791431
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||  ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| |||| |||| |    
T  20791302 tagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagt 20791401  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    |||||| | ||||||||||||||| |||||    
T  20791402 gtagatccgcaatgatttaaaccaataaga 20791431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 50661695 - 50661594
Alignment:
Q  130 agcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatg 229  Q
    |||||||||| |||||||||||||||||||||| | ||| ||| ||| ||| |||| |||  ||||| || |||||| ||||||||| |||| |||||||    
T  50661695 agcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatg 50661596  T
Q  230 ta 231  Q
    ||    
T  50661595 ta 50661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 8825150 - 8825023
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| |||  ||||||||  | ||||  ||| ||| |||||||| |||||||||| || || ||| || |||||||||||||||| | ||    
T  8825150 caacactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtcta 8825051  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
     | ||||||| |||||||||| ||||||    
T  8825050 cactcacaataatttaaaccaataagag 8825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 10948730 - 10948611
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| |||||| |||| | || |||||| || |||||| || |||||| |||||  || ||||||||||  |||||||||| ||| ||||     
T  10948730 aacactcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaa 10948631  T
Q  233 attcacaatgatttaaacca 252  Q
    |  |||||||||||||||||    
T  10948630 acccacaatgatttaaacca 10948611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 24429142 - 24429076
Alignment:
Q  187 aatatatgtctcatcacttt-gtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||||||||||| ||| ||| |||||||||||| ||| ||||||| |||||||||||||||||    
T  24429142 aatatatgtctcatcatttttgtgagggttcaatttttaaagtgtagatccacaatgatttaaacca 24429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 49072057 - 49072134
Alignment:
Q  175 ttggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||||||||| ||||||||| |||||||| || |||  ||||||||| ||||||  |||||| ||||||||||    
T  49072057 ttggatgaaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaacca 49072134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 14236044 - 14236148
Alignment:
Q  148 acactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattta 247  Q
    ||||||||| || || ||||| ||| |||||||||||| |||||||||| || |||||| || | |||| |||| |||| ||||||| |||||| |||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataattta 14236143  T
Q  248 aacca 252  Q
     ||||    
T  14236144 gacca 14236148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 46575957 - 46576056
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||| || || ||||||||||| |||| ||||| | | ||||| |||||  ||| |||||| || |||||| ||||||||| ||||||||||||||    
T  46575957 caacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgta 46576056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 259
Target Start/End: Complemental strand, 50156831 - 50156704
Alignment:
Q  130 agcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatg 229  Q
    |||||||||||||||| ||||| ||||   ||  | |||| || |||| ||||||||||| |||||  ||  |||||| | |||||||||||| ||| ||    
T  50156831 agcaacactcacttttcaacacactctgatac--ttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtg 50156734  T
Q  230 tagattcacaatgatttaaaccactaagag 259  Q
    ||||  ||||||||||||||||| ||||||    
T  50156733 tagacccacaatgatttaaaccaataagag 50156704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 13639412 - 13639465
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaatt 186  Q
    ||||||| ||||  |||||||||||||||||||||| ||| |||||||||||||    
T  13639412 aacactctctttctaacactctctctaacagtcactcttttattggatgaaatt 13639465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 13809088 - 13809184
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    ||||||||||| |||||| ||||||||||||||  ||||| ||| ||||||| |||| ||| |||||| || || ||| ||||||||| |||| ||||    
T  13809088 tagcaacactctcttttacacactctctctaac-ttcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaa 13809184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 24748908 - 24748969
Alignment:
Q  124 agtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||| ||||||||||| ||||| | |||||||||||||| ||||| ||| ||||||||||||    
T  24748908 agtgatagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaat 24748969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 29588862 - 29588777
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| |||| ||| ||||||   ||||||| |||| |||||||||||||| ||||||  |||||||||||||| || ||||||    
T  29588862 attggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagag 29588777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 38414678 - 38414783
Alignment:
Q  154 tctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccac 253  Q
    ||||||||||||||| | | ||| ||| | || ||| |||||| || || |||||||||||| |||||| ||| ||||||| ||| || ||||||||||     
T  38414678 tctctaacagtcactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaa 38414777  T
Q  254 taagag 259  Q
    ||||||    
T  38414778 taagag 38414783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 52951543 - 52951478
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||||||| ||||||||||| ||||| ||||||||||||| || ||||| | | ||||||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaat 52951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 138793 - 138889
Alignment:
Q  153 ctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    ||||||| || ||||| ||| |||| ||||||| ||| ||||||||| || ||||| ||  ||||||||| |||||||| | | |||||||||||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaa 138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 41607462 - 41607537
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    |||||||| ||| |||||||||||||  | |||||||| ||| |||||||||| ||||||| |||| | |||||||    
T  41607462 attggatgtaatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaa 41607537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 27243237 - 27243191
Alignment:
Q  114 ttatatgaggagtggtagcaacactcacttttaaacactctctctaa 160  Q
    |||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  27243237 ttatatgaggagtgctagcaacactctcttttgaacactctttctaa 27243191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 29388687 - 29388649
Alignment:
Q  210 tgggttcaattttcaaaatgtagattcacaatgatttaa 248  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  29388687 tgggttcaattttcaaagtgtagactcacaatgatttaa 29388649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 43016440 - 43016549
Alignment:
Q  152 tctctctaacagtcactttttaattggatgaaattaat--atatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    ||||||||||| ||||||||| |||  ||||||| |||  ||||||| ||  ||| |||||  |||||||||| ||| | |||||||| |||||||||||    
T  43016440 tctctctaacattcacttttttattaaatgaaatcaatgtatatgtcgcactactctgtgttagttcaatttttaaagtatagattcataatgatttaaa 43016539  T
Q  250 ccactaagag 259  Q
     || ||||||    
T  43016540 tcaataagag 43016549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 37600301 - 37600212
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattt 221  Q
    |||||||| ||||| | ||||||||||| ||  |||| ||| ||||| |||||| ||| |||||| || |||||| ||||||||| ||||    
T  37600301 caacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 37600212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 29389187 - 29389103
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtggg 213  Q
    ||||||||||||||||| | ||||| || ||||| ||||| ||| |||| || |||| ||| |||||| || |||||||| ||||    
T  29389187 tagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgtatggg 29389103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 30355215 - 30355183
Alignment:
Q  218 attttcaaaatgtagattcacaatgatttaaac 250  Q
    |||||||||||||| ||||||||||||||||||    
T  30355215 attttcaaaatgtatattcacaatgatttaaac 30355183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 44844158 - 44844102
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||||| |||| |||||  ||||||||||||||| ||||||||| ||||||| ||||    
T  44844158 tagcaagactctctttttgacactctctctaacactcacttttttattggattaaat 44844102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 54141064 - 54140964
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||  ||||| | ||||||||||| || |||||  || ||||| |||||| ||| |||||| || ||||||  |||||||| ||||||||| ||||    
T  54141064 caacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgta 54140965  T
Q  232 g 232  Q
    |    
T  54140964 g 54140964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 34905342 - 34905472
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| |||| |||||||||||||||| ||||| ||| |||||||||||| ||| |||||| || |||||||| ||||||||||||||||| |    
T  34905342 tagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagt 34905441  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  ||||||||||||||||| ||||||    
T  34905442 gtagacccacaatgatttaaaccaataagag 34905472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 445813 - 445954
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || |||||| ||||| |||| |||||| |||||| || ||||||||| |||||||||||| ||| |||||| || |||||||||||||||||    
T  445813 atgaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttca 445912  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||| | |||| |||||||||||||||||| ||||||    
T  445913 attttcaaagtctagagtcacaatgatttaaaccaataagag 445954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 10133335 - 10133209
Alignment:
Q  126 tggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaa 225  Q
    |||||| ||||||||||||| |||||||||||||||| |||||  || |||||||||||||| | |||||| || |||||| || |||||||||||||||    
T  10133335 tggtagaaacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaa 10133236  T
Q  226 aatgtagattcacaatgatttaaacca 252  Q
    | ||||||  |||||||||||||||||    
T  10133235 agtgtagaaccacaatgatttaaacca 10133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 5106308 - 5106427
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| |||||| ||||||||| ||||||||| ||||||| |||| ||| |||||| || ||||||||||||| |||||||||||| ||||     
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtac 5106407  T
Q  233 attcacaatgatttaaacca 252  Q
    |  ||||| |||||||||||    
T  5106408 acccacaaggatttaaacca 5106427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 31116296 - 31116168
Alignment:
Q  131 gcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgt 230  Q
    ||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||| ||| |||||| ||  |||||||||| |||| |||| |||  |||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  231 agattcacaatgatttaaaccactaagag 259  Q
    | |  ||||||||||||||||| ||||||    
T  31116196 aaacccacaatgatttaaaccaataagag 31116168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 35128907 - 35128794
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||| |||| ||||||||||| ||||| ||||||||||||| |||||||| ||| ||||| | |||| ||| |||||| || |||||| ||||||||| |    
T  35128907 tgagaagtgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttcca 35128808  T
Q  219 ttttcaaaatgtag 232  Q
    |||||||| |||||    
T  35128807 ttttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 32122804 - 32122920
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||| ||||| |||||||| || | || |||||| || |||||||||||| |||||||||| || || |||||| | |||||||||||||| ||||    
T  32122804 caacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgta 32122903  T
Q  232 gattcacaatgatttaa 248  Q
    ||  |||||||||||||    
T  32122904 gacccacaatgatttaa 32122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 13001702 - 13001800
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||||||||| | |||||||||||||| ||| ||||| ||||||| |||| ||| |||||| ||||| ||| ||||| |||||||| |||||||||    
T  13001702 aacactcacttttcagcactctctctaacattcattttttcattggataaaataaatgtatgtcacatcattttatgtggattcaatttgcaaaatgta 13001800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 1392640 - 1392763
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| ||||||||||  | || ||  ||||| |||||||||||| ||| |||||||||  ||||||| || |||||||||| |||||||||    
T  1392640 aacactcactttttaacactctct--agcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 1392737  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
       ||||||||||||||||| ||||||    
T  1392738 -cccacaatgatttaaaccaataagag 1392763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 12780896 - 12780805
Alignment:
Q  166 actttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaag 257  Q
    ||||||| ||| | || ||| ||| |||||||||  ||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  12780896 acttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataag 12780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 12753943 - 12753813
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||||||| | || || ||||| ||| ||||||| ||||  ||  ||||| || |||||||||||||||| ||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctat 12753844  T
Q  220 tttcaaaatgtagattcacaatgatttaaac 250  Q
    |||||   |||| | ||||||||||||||||    
T  12753843 tttcagggtgtacactcacaatgatttaaac 12753813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 2675899 - 2676024
Alignment:
Q  127 ggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    |||||||||||||| |||| |||| | | | ||||| ||||| ||| |||| ||||| | ||| |||||| || |||||||| | |||| ||||||||||    
T  2675899 ggtagcaacactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaa 2675998  T
Q  227 atgtagattcacaatgatttaaacca 252  Q
    |||||||  ||||||| |||||||||    
T  2675999 atgtagacccacaatggtttaaacca 2676024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 16852098 - 16852017
Alignment:
Q  178 gatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||| ||| |||||| || ||||||||  |||||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  16852098 gatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagag 16852017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 31443965 - 31444085
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| | | |||| |||||||| | ||||| ||| | ||| |||||||||||||||| |||||  || || ||||||| ||||||||||||||| |    
T  31443965 tagcaacaataatttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagt 31444064  T
Q  229 gtagattcacaatgatttaaa 249  Q
    || || |||||| ||||||||    
T  31444065 gttgactcacaaggatttaaa 31444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 32112852 - 32112761
Alignment:
Q  168 tttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||| |||||||||||| |||  ||||| || || ||||||||||||  ||||||||| ||||||| |||||||||||||| || ||||||    
T  32112852 ttttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagag 32112761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 21987301 - 21987427
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| ||| || || |||||| || | |||| |||| |||| ||||    
T  21987301 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgta 21987400  T
Q  232 gattcacaatgatttaaaccactaaga 258  Q
    ||| | ||||||||||||||| |||||    
T  21987401 gatccgcaatgatttaaaccaataaga 21987427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 12785077 - 12784983
Alignment:
Q  165 cactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||| ||||| || ||| ||| ||||||| |  ||||| |||  |||||||||||||| ||||||| || |||||||||||||| ||||||    
T  12785077 cacttttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagag 12784983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 19090404 - 19090286
Alignment:
Q  114 ttatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtggg 213  Q
    ||||| ||||| || || |||||||| ||||| | ||||||||||| ||  |||| ||| ||||| |||||| ||| |||||| || |||||| ||||||    
T  19090404 ttataagaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggg 19090305  T
Q  214 ttcaattttcaaaatgtag 232  Q
    ||| |||| |||| |||||    
T  19090304 ttccatttccaaagtgtag 19090286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 4595765 - 4595850
Alignment:
Q  146 aaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| || ||||| ||| ||||  |||||| ||| ||||||||| |||||| | ||||||| ||||||||| ||||    
T  4595765 aaacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgta 4595850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 10060856 - 10060968
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||| ||||| |||||||| | ||||| ||||| ||| |||   |||||| ||| |||||| |  |||||| ||||||||| ||    
T  10060856 gaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccat 10060955  T
Q  220 tttcaaaatgtag 232  Q
    ||||||| |||||    
T  10060956 tttcaaagtgtag 10060968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 12690271 - 12690335
Alignment:
Q  142 ttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt 206  Q
    ||||||||||||||||||||| |  || ||| ||||||||||||||||  |||||||| ||||||    
T  12690271 ttttaaacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccacttt 12690335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 32599050 - 32599002
Alignment:
Q  201 cactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    |||||||||||||| | |||| |||| ||||||||||||||||||||||    
T  32599050 cactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaa 32599002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 12794988 - 12794885
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| |||||||||||||||| | | || || |||   |||||||||| ||| || || |||||| |||| |||  |||||||||||    
T  12794988 tagcaacactctcttttgaacactctctctaacatttatttatttatttagtgaaattaatgtatatcccaccactttatgtgagtttcattttcaaaat 12794889  T
Q  229 gtag 232  Q
    ||||    
T  12794888 gtag 12794885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 8442025 - 8441955
Alignment:
Q  115 tatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||| ||||| || ||||| |||||| |||| |||||||||||||||| |||||  || ||||||||||||    
T  8442025 tataagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaat 8441955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 8450829 - 8450759
Alignment:
Q  115 tatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||| ||||| || ||||| |||||| |||| |||||||||||||||| |||||  || ||||||||||||    
T  8450829 tataagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaat 8450759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 17144822 - 17144724
Alignment:
Q  152 tctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaac 250  Q
    |||||||| || | ||| ||| |||| ||||||| |||||||||  || |  ||||||| |||| |||||||||| ||||||  |||||||||||||||    
T  17144822 tctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaac 17144724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 32439469 - 32439539
Alignment:
Q  116 atatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaatt 186  Q
    |||||||||||| ||  ||||||| |||| ||||||||||||||||| ||||| | | ||||| |||||||    
T  32439469 atatgaggagtgctatgaacactctctttcaaacactctctctaacactcactctcttattgggtgaaatt 32439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 10061036 - 10060987
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattgg 178  Q
    ||||||||||| ||||| | |||||||||||||| ||||||||| |||||    
T  10061036 tagcaacactctcttttgagcactctctctaacactcacttttttattgg 10060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 34142313 - 34142183
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||| |||||| |||| |||||| |||| ||||||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| |    
T  34142313 tagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagt 34142214  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||||| |||||||| ||||||||| ||||||    
T  34142213 gtagagtcacaatggtttaaaccaataagag 34142183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 38464173 - 38464299
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    |||| |||||||| |||||||||||| ||| | ||||||| |||| ||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  38464173 aacattcacttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtag 38464272  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
    |  ||||||||||||||||| ||||||    
T  38464273 acccacaatgatttaaaccaataagag 38464299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 252
Target Start/End: Complemental strand, 26767949 - 26767812
Alignment:
Q  115 tatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggt 214  Q
    |||||||||| || ||||||||||||||||| |||| |||||||| || | ||| ||| | |||||||||| ||| |||||| || ||||||||| ||||    
T  26767949 tatatgaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggt 26767850  T
Q  215 tcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  26767849 tcaattttcaaattgtagactcacaatgatttaaacca 26767812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 9470087 - 9470217
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||| ||||| |||| ||| |||||||||||| ||||| ||| |||||||||||| ||| |||||| || |||||||| ||||||||||||||||| |    
T  9470087 tagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagt 9470186  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  ||||||||||||||||| ||||||    
T  9470187 gtagacccacaatgatttaaaccaataagag 9470217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 44274241 - 44274363
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||||||| |  |||||||||||||| ||||| ||| ||||||| |||| ||| |||||| || |||||||||||||||||| ||||||| |    
T  44274241 tagcaacactcactttgag-cactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagt 44274339  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||| |||||||||||||||||    
T  44274340 gtagatccacaatgatttaaacca 44274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 36472021 - 36471889
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||| ||||||||||||| |||||||||||| ||| ||| | | | |||||||||||| ||  ||||||||| |||||| | ||| ||||||    
T  36472021 gaggaatgatagtaacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaat 36471922  T
Q  220 tttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||||||| | ||||||||||||||||||    
T  36471921 tttcaaaatgtaaactcacaatgatttaaacca 36471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 10981531 - 10981654
Alignment:
Q  136 actcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagatt 235  Q
    |||||||||| |||||||||||||||| ||||||||  |||| ||||||  ||| |||||| || |||||||||||||||| |||| |||  ||||||      
T  10981531 actcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacc 10981630  T
Q  236 cacaatgatttaaaccactaagag 259  Q
    ||||||||||||||||| ||||||    
T  10981631 cacaatgatttaaaccaataagag 10981654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 12989186 - 12989327
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||||||||||||||| |||||||||| |  || ||||| ||| |||||||||||| ||| |||||| || |||||||| ||| |||     
T  12989186 atgaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattct 12989285  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||| | || ||||||  ||||||||||||||||| ||||||    
T  12989286 atttccgaagtgtagacccacaatgatttaaaccaataagag 12989327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 30718497 - 30718378
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||||| ||||||||| ||||||||  | ||||| ||| ||||||||||||  ||||||||| ||||| ||||||||| ||  ||||||||| ||||    
T  30718497 caacactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgtc-catcattttgtgtggattgtattttcaaagtgta 30718399  T
Q  232 gattcacaatgatttaaacca 252  Q
    || ||||||||||||||||||    
T  30718398 gactcacaatgatttaaacca 30718378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 32856324 - 32856179
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaa----cagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtggg 213  Q
    ||||||| || || |||||||||||||| ||||||||||| |     || | ||| ||| || ||||||||||||||||||| ||| |||||||||||||    
T  32856324 atgaggaatgctaacaacactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtggg 32856225  T
Q  214 ttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    || |||||||||| ||||||| || | |||||||||||| ||||||    
T  32856224 ttgaattttcaaagtgtagatccatagtgatttaaaccaataagag 32856179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 472298 - 472207
Alignment:
Q  168 tttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||||||| |||| |  ||||||||||| |||||||||| |||||||||||||||| || || ||||||||||||||||| ||||||    
T  472298 tttttaattggatcaaatcagcatatgtctcattactttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagag 472207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 19639107 - 19639229
Alignment:
Q  137 ctcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattc 236  Q
    ||||||||| ||||||||||| | || ||||| ||| ||| |||||||| ||| ||||||||||||| | ||||| |||||||||||||| || |||       
T  19639107 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19639206  T
Q  237 acaatgatttaaaccactaagag 259  Q
    |||||||||||||||| ||||||    
T  19639207 acaatgatttaaaccaataagag 19639229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 19837700 - 19837822
Alignment:
Q  137 ctcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattc 236  Q
    ||||||||| ||||||||||| | || ||||| ||| ||| |||||||| ||| ||||||||||||| | ||||| |||||||||||||| || |||       
T  19837700 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19837799  T
Q  237 acaatgatttaaaccactaagag 259  Q
    |||||||||||||||| ||||||    
T  19837800 acaatgatttaaaccaataagag 19837822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 259
Target Start/End: Original strand, 11539419 - 11539562
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaata--tatgtctcatcactttgtgtgggttc 216  Q
    |||||| || || ||||||||| |||| |||||||| |||| || ||||| ||| |||||||||||| ||||  |||||  |||||||||||||| ||||    
T  11539419 tgaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttc 11539518  T
Q  217 aattttcaaaatgtagattcacaa-tgatttaaaccactaagag 259  Q
     ||||||||| ||||||| || || |||||||||||| ||||||    
T  11539519 tattttcaaagtgtagatccagaattgatttaaaccaataagag 11539562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 18511394 - 18511255
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||||||||||||||| ||||||||| ||| || ||||| ||| ||||||| |||| ||| |||||| ||  | ||| ||||||||||    
T  18511394 atgaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttca 18511295  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaag 257  Q
    ||||||||| || |||   |||||| ||||||||| ||||    
T  18511294 attttcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 25238445 - 25238328
Alignment:
Q  139 cacttttaaacactctctctaaca---gtcactttttaattggatgaaattaatatatgtctcatcactt-tgtgtgggttcaattttcaaaatgtagat 234  Q
    ||||||| ||||||||||||||||   || | ||||| ||| ||| |||| ||| ||||||||||||||| | ||||||||| ||||||||| |||||||    
T  25238445 cacttttgaacactctctctaacatttgttatttttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagat 25238346  T
Q  235 tcacaatgatttaaacca 252  Q
     |||||||||||||||||    
T  25238345 ccacaatgatttaaacca 25238328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 6980294 - 6980164
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| |||||||| ||||||||||||| || ||||| ||| |||||||||||| ||  |||||   | ||||||||||| |||||||||||||| |    
T  6980294 tagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagt 6980195  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
     ||||  ||||||||||| ||| | ||||||    
T  6980194 atagacccacaatgatttcaactaataagag 6980164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 3804590 - 3804711
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgt-ctcatcactttgtgtgggttcaattttcaaaa 227  Q
    |||| |||||||||||| |||||||||| ||||| ||||| ||| |||||||||||| ||| ||||| | ||||||||| ||| |||| ||||||||||     
T  3804590 tagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttcaaag 3804689  T
Q  228 tgtagattcacaatgatttaaa 249  Q
    |||| |  |||||| |||||||    
T  3804690 tgtacacccacaataatttaaa 3804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 7919383 - 7919314
Alignment:
Q  190 atatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| || |||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  7919383 atatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagag 7919314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 24497201 - 24497302
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| | |||||||| |||||||| |||||| ||||||||||| |||| |||||  ||||| ||||||||| ||  ||||||||| ||||    
T  24497201 caacactcacttttgaccactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgta 24497300  T
Q  232 ga 233  Q
    ||    
T  24497301 ga 24497302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 45554573 - 45554694
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||| |||||||||||| ||| |||||| || |||||||        |||||||| || |    
T  45554573 tagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagt 45554664  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    |||||  ||||||||||||||||| |||||    
T  45554665 gtagacccacaatgatttaaaccaataaga 45554694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 8009521 - 8009612
Alignment:
Q  131 gcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaatttt 222  Q
    ||||||||| ||||| |||||||| ||||||| |||||||||  ||||||||||| || |||||||||| |||||| ||||| ||| |||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtttccatttt 8009612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 15884498 - 15884564
Alignment:
Q  192 atgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    ||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||| |||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataaga 15884564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 42579813 - 42579733
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaa 227  Q
    ||||||||||| |||| ||||| ||| |||||||||||| ||||||| ||||||||||||  |||||||  ||||||||||    
T  42579813 aacactctctcaaacactcactcttttattggatgaaatcaatatatatctcatcactttacgtgggtttcattttcaaaa 42579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 15508910 - 15509025
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||| ||||  |||||| ||| |||||| || || ||| ||||||||| |    
T  15508910 tgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttcca 15509009  T
Q  219 ttttcaaaatgtagat 234  Q
    ||| |||| |||||||    
T  15509010 tttccaaagtgtagat 15509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 37652419 - 37652296
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||| ||| |||||| | | || || | ||||||| ||| |||||||| ||| |||||  || | ||||||||  ||||||||| |||  |    
T  37652419 tagcaacactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgt 37652320  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    ||||||||||||||||||||||||    
T  37652319 gtagattcacaatgatttaaacca 37652296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 42182895 - 42182998
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| | ||||||||||| || ||||| ||| ||||| |||||| ||| |||||| || |||||| ||||||||| |||| |||| |    
T  42182895 tagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagt 42182994  T
Q  229 gtag 232  Q
    ||||    
T  42182995 gtag 42182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 17188076 - 17188194
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| |||  |||||||| || ||||| ||| |||||||||||| ||| | | ||||| |||||||||||   |||||||||||| ||||    
T  17188076 caacactcacttttcaac--tctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgta 17188173  T
Q  232 gattcacaatgatttaaacca 252  Q
    |   || ||||||||||||||    
T  17188174 ggcccagaatgatttaaacca 17188194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 25730602 - 25730490
Alignment:
Q  140 acttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcaca 239  Q
    |||||| |||||||| ||||||| ||||||||| |||||||| |||  || ||||||||| ||  || ||||||||| ||||| ||  |||| | |||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcaca 25730503  T
Q  240 atgatttaaacca 252  Q
     ||||||||||||    
T  25730502 gtgatttaaacca 25730490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 28898222 - 28898106
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || |||||||||||  |||| | ||||||||||| || ||||| ||| ||||| |||||| ||| |||||| || |||||| ||||||||      
T  28898222 atgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttc 28898123  T
Q  218 attttcaaaatgtagat 234  Q
    |||| |||| |||||||    
T  28898122 atttccaaagtgtagat 28898106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 45270726 - 45270607
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| |||||||| |||| | ||||||||| | ||||||| ||||||| |||||||| ||||| |||  | ||||||||  ||| ||||| ||| ||||    
T  45270726 caacattcacttttcaacattttctctaacact-acttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgta 45270628  T
Q  232 gattcacaatgatttaaacca 252  Q
     | ||||||||||||||||||    
T  45270627 aactcacaatgatttaaacca 45270607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 16719604 - 16719481
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||||| ||| || ||   ||| ||| ||| |||||||| ||| ||| || || || ||  ||| |||||||||||||||||    
T  16719604 tagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaat 16719505  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||  | |||||||||||||||    
T  16719504 gtagacccgcaatgatttaaacca 16719481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 37228504 - 37228602
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatg-aaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    ||||||||||| ||||| | ||||||||||| || ||||| ||| ||||| || |||||||| |||||| || |||||| |||||||||  ||||||||    
T  37228504 tagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgttttcaaa 37228602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 19190641 - 19190698
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatat 191  Q
    |||||| ||||||| |||||||||||||| ||| ||| | ||||||||||||||||||    
T  19190641 acactctcttttaagcactctctctaacactcattttcttattggatgaaattaatat 19190698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 12099050 - 12098910
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||| ||||| |||  ||||| || || || || ||| ||| |||||||| ||  ||||||||  |||||||| || |||||||    
T  12099050 gaggaatgttagcaacactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaat 12098951  T
Q  220 tttcaaaatgtagattcac-aatgatttaaaccactaagag 259  Q
    ||||||| |||| | |||| |||||||||||| | ||||||    
T  12098950 tttcaaagtgtaaactcacaaatgatttaaactaataagag 12098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 2122801 - 2122880
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgt 208  Q
    ||||||||||||||||| || ||| |||||| || ||||| ||| || ||||||||| ||| ||||| ||| ||||||||    
T  2122801 tagcaacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgt 2122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 25666764 - 25666697
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctca 199  Q
    ||||||||| |||| ||||||||||| |||| ||||| ||| || ||||||||| ||| |||||||||    
T  25666764 caacactcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtctca 25666697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 41546212 - 41546098
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||| ||||| ||||| ||||||||||| |||| ||||| | | |||||||| ||| |||||||||| |  ||||||  ||| ||||     
T  41546212 atgaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccactttacgtgagttcc 41546114  T
Q  218 attttcaaaatgtaga 233  Q
    |||||||||| |||||    
T  41546113 attttcaaaacgtaga 41546098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 1110195 - 1110301
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||| ||||  | || ||||||||||| ||||| ||| ||||  |||||| ||| |||||| || |||||| ||||||||| ||    
T  1110195 gaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccat 1110294  T
Q  220 tttcaaa 226  Q
    || ||||    
T  1110295 ttccaaa 1110301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 19193495 - 19193553
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaatt 176  Q
    ||||||| || ||||||||||| ||||| ||||||||||| |||| ||||||| |||||    
T  19193495 atgaggaatgctagcaacactctcttttcaacactctctccaacactcactttctaatt 19193553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 43400146 - 43400216
Alignment:
Q  136 actcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt 206  Q
    |||| ||||| |||||||||||||||| ||||||| | ||||||||||| || | |||||| || ||||||    
T  43400146 actctcttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccacttt 43400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 8e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 31502647 - 31502508
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||| ||||||||||| ||||| ||| |||||||||||| ||  |||||| || || |||||||| |||||||    
T  31502647 gaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaat 31502548  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| |||||| |||||||||||||||||| ||||||    
T  31502547 tttcaaagtgtagactcacaatgatttaaaccaataagag 31502508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 27888279 - 27888418
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| | |||||||||||||| ||||  | | ||||||| |||| ||| |||||| || |||||||||||||||||||    
T  27888279 gaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaat 27888378  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||| ||| ||||||  ||||||||||||||||| ||||||    
T  27888379 ttttaaagtgtagacccacaatgatttaaaccaataagag 27888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 14795137 - 14795267
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||| |||||| || || ||| ||| ||||||||||| ||| |    
T  14795137 tagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagt 14795236  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||| || || |||||||||||| | ||||||    
T  14795237 gtatatccataatgatttaaactaataagag 14795267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 15242129 - 15242259
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||| |||||| || || ||| ||| ||||||||||| ||| |    
T  15242129 tagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagt 15242228  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||| || || |||||||||||| | ||||||    
T  15242229 gtatatccataatgatttaaactaataagag 15242259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 22189934 - 22190068
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||| |||||||| |||| ||||||||||||| || ||||| ||| |||||||||||| ||| |||| | || |||||||||||||||||    
T  22189934 atgaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttca 22190033  T
Q  218 attttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||| ||||||  | |||||||||||||||    
T  22190034 attttcaaagtgtagacccgcaatgatttaaacca 22190068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 44350965 - 44350853
Alignment:
Q  140 acttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcaca 239  Q
    |||||| |||||| |||||||||  |||||||| ||||||| |||| ||| |||||||| ||||||||| | ||||||||||||||| |||||| |||||    
T  44350965 acttttcaacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcaca 44350866  T
Q  240 atgatttaaacca 252  Q
    |||||||||||||    
T  44350865 atgatttaaacca 44350853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 44511107 - 44510999
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||| |||||| ||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||||||||| || |||||||||||||  ||||    
T  44511107 caacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgta 44511008  T
Q  232 gattcacaa 240  Q
    ||| |||||    
T  44511007 gatccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 12263610 - 12263481
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||| |||||| ||||||||||||| ||  |||| ||| || ||||| ||| ||| |||||| ||||||||||||| || |||||||||||| |    
T  12263610 tagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagt 12263511  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    |||||  ||||||||||||||||| |||||    
T  12263510 gtagacccacaatgatttaaaccaataaga 12263481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 33008100 - 33008233
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || ||||||||||||||||| |||||| |||||| || ||||| ||| |||||||||||| | | |||||| || |||||||||||||||| |    
T  33008100 tgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttcta 33008199  T
Q  219 ttttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||| |||  ||||||  |||||||||||||||||    
T  33008200 tttccaatgtgtagacccacaatgatttaaacca 33008233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 27949282 - 27949409
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| |||||||||||||||| ||||| ||  |||||||||||| ||  ||||||  | || |||||||| |||||| ||||||| ||||    
T  27949282 caacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgta 27949381  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
    ||  ||||||||||||||| | ||||||    
T  27949382 gacccacaatgatttaaactaataagag 27949409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 32213039 - 32212914
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| ||||||||||||| || ||  | ||| |||||||||||| ||| |||||||||  ||||||| || |||||||||| |||||||||    
T  32213039 aacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 32212940  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
       ||||||||||||||||| ||||||    
T  32212939 -cccacaatgatttaaaccaataagag 32212914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 39254089 - 39254219
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| |||||||| |||| ||||| || || ||||| ||| |||| || |||||||| ||||| ||| |||||||||| ||||||||||| |||||    
T  39254089 tagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaat 39254188  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  |||||| ||||||| || ||||||    
T  39254189 gtagacccacaataatttaaatcaataagag 39254219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 11824077 - 11824206
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| |||| ||| ||||||||| || ||||| ||| |||||||||||| ||| |||||| || || ||||||| | ||||||||||||| |    
T  11824077 tagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagt 11824176  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    ||| |  |||||||||||||| || |||||    
T  11824177 gtaaacccacaatgatttaaatcaataaga 11824206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 46517299 - 46517427
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||  | || |||||  || ||||||| |||| ||| ||| || || || | |||| |||||||||||||||| |    
T  46517299 tagcaacactcactttttaacactctct--agcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagt 46517396  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||||| |||||||||||||||||| ||||||    
T  46517397 gtagactcacaatgatttaaaccaataagag 46517427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 32205076 - 32205212
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||||||||||||    ||||| ||| |||||||||||| ||| ||||||  | || ||||||||||||||||    
T  32205076 gaggaatgctagcaacactcacttttgaacactctctctac---tcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaat 32205172  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||| ||| | ||| |  |||||||||||||| | ||||||    
T  32205173 ttttaaagtataggtctacaatgatttaaactaataagag 32205212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 36845695 - 36845567
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||| |||| |||||| ||| || |  ||||| ||| |||| ||||||| ||||||| ||||| || ||||||||||||||||||||||| |    
T  36845695 tagcaacattcatttttcaacactttctttatcgctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagt 36845597  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
     ||||  ||||||||||||||||| |||||    
T  36845596 atagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 22786144 - 22786260
Alignment:
Q  116 atatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggtt 215  Q
    |||| |||| || ||||||||||| ||||| | ||||||||||| || ||||||||| ||| | |||||| ||| ||||||||| |||||| ||||||||    
T  22786144 atataaggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggtt 22786243  T
Q  216 caattttcaaaatgtag 232  Q
    | |||| |||| |||||    
T  22786244 ccatttccaaagtgtag 22786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 19423008 - 19422885
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||| |||||||||||| ||| |||||| || | | |||| | |   | |||||| || |    
T  19423008 tagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaagt 19422909  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||| |||||||||||||||||    
T  19422908 gtagatccacaatgatttaaacca 19422885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 6442161 - 6442294
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || || ||||||||| |||| ||||||||||||| || ||| |  || |||| ||||||| ||| |||||  || || |||||| || |||||    
T  6442161 tgaggaatgttaacaacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaa 6442260  T
Q  219 ttttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||| ||||||  |||||||||||||||||    
T  6442261 ttttcaaagtgtagacccacaatgatttaaacca 6442294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 11692209 - 11692306
Alignment:
Q  153 ctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaac 250  Q
    |||||||| | ||||| ||| |||||||||||| ||| ||||||  | |||||||||| ||||||||||||||| |||| | ||||| ||||||||||    
T  11692209 ctctctaatattcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaac 11692306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 32605384 - 32605457
Alignment:
Q  176 tggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    |||||||||| ||| |||||||||| ||||||||||| ||||||||| ||| |||||  |||||||||||||||    
T  32605384 tggatgaaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaatgatttaaa 32605457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 7775019 - 7775103
Alignment:
Q  142 ttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    |||| |||||||||| || || ||||| ||| |||||||||||| ||| |||||| || ||||||||||| ||||||||||||||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaa 7775103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 17354710 - 17354598
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||||||  |||| | |||||||||||||| ||| | ||| |||||||||||| ||| |||||| || |||||| ||||||||| ||    
T  17354710 gaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctat 17354611  T
Q  220 tttcaaaatgtag 232  Q
    || |||| |||||    
T  17354610 ttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 10934136 - 10934009
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||  ||| |||||||||||||  | ||| | ||| ||||||| |||||||||||||||||| |||||||| ||| ||| |||| |||| | ||    
T  10934136 caacactcatgttttaacactctctctattattcattcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtata 10934037  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
     |  ||||||||||||||| | ||||||    
T  10934036 aacccacaatgatttaaactaataagag 10934009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 42863617 - 42863566
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttt 171  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  42863617 gaggaatgctagcaacactcacttttaaacactctctctaacactcactttt 42863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 24539297 - 24539195
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||| |||||| |||||  ||||||||||||||| ||||| ||| ||||||| |||| |||||||||| || |||||| | ||| ||| |||| ||||||    
T  24539297 tagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaat 24539198  T
Q  229 gta 231  Q
    |||    
T  24539197 gta 24539195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 259
Target Start/End: Complemental strand, 6580189 - 6580046
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattg---gatgaaattaatatatgtctcatcactttgtgtgggtt 215  Q
    |||||| |||||||||||||||||||| |||||||| |||  || |||||||||  ||    | || | | ||| |||||||||  ||||||||| ||||    
T  6580189 tgaggaatggtagcaacactcacttttcaacactctttcttgcactcactttttttttttttggtggattcaatgtatgtctcactactttgtgtaggtt 6580090  T
Q  216 caattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||||||| | ||  |||||| |||||||||| ||||||    
T  6580089 caattttcaaaatatggacccacaataatttaaaccaataagag 6580046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 25686960 - 25686880
Alignment:
Q  178 gatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    |||||||| ||| ||||||  | |||||| | ||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  25686960 gatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataaga 25686880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 13919786 - 13919889
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| | ||||||||||| || || ||  || ||||| |||||| ||| |||||| || |||||| ||||||||| ||||||||| |    
T  13919786 tagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagt 13919885  T
Q  229 gtag 232  Q
    ||||    
T  13919886 gtag 13919889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 41873460 - 41873532
Alignment:
Q  149 cactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattt 221  Q
    |||||||||||||| ||||||||| ||||| ||||| | || |  ||||||||||||| ||||||||| ||||    
T  41873460 cactctctctaacactcacttttttattgggtgaaactcatgtgagtctcatcactttatgtgggttccattt 41873532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 7459353 - 7459472
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| |||| ||||| ||| | ||| | ||| ||| ||| |||| ||| ||| |  || |||||| |||| | |||||||||||||| |||    
T  7459353 aacactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatag 7459452  T
Q  233 attcacaatgatttaaacca 252  Q
    || |||||| ||||||||||    
T  7459453 atccacaataatttaaacca 7459472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 17749719 - 17749802
Alignment:
Q  148 acactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||||||||||| ||||| ||| ||||||| |||| |||||||||| || |||||| | ||| ||  |||| |||||||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgta 17749802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1687990 - 1688067
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttg 207  Q
    |||||||||| | |||| ||||||||||||  || |||||||||  |||||||||||| || ||||||||| |||||||    
T  1687990 tagcaacact-attttttaacactctctctgtcattcactttttctttggatgaaattgatgtatgtctcaccactttg 1688067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 46994361 - 46994415
Alignment:
Q  124 agtggtagcaacactcacttttaaacactctctctaacagtcactttttaattgg 178  Q
    |||| ||||||||||| ||||| ||| |||||||||||| ||||||||| |||||    
T  46994361 agtgatagcaacactctctttttaacgctctctctaacactcacttttttattgg 46994415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 2520630 - 2520695
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||||||| ||| ||||||| ||||| ||||||||||| |||| ||||| ||| ||||| ||||||    
T  2520630 gaggagtgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaat 2520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 20954856 - 20954807
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattgg 178  Q
    ||||||||||| ||||| ||||||||||| |||| ||||||||| |||||    
T  20954856 tagcaacactctcttttcaacactctctcaaacactcacttttttattgg 20954807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 31960028 - 31959971
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaat 189  Q
    |||||||| ||||| | ||||||||||| || |||||| || ||||||||||||||||    
T  31960028 caacactctcttttgagcactctctctagcactcacttatttattggatgaaattaat 31959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 12270984 - 12271096
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || |||||||||  |||||| |||||||||| || ||  |||| ||| ||  |||||||| ||| |||||| || |||||||||| ||||| |    
T  12270984 tgaggaatgctagcaacac--acttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgt-ggttcta 12271080  T
Q  219 ttttcaaaatgtagat 234  Q
    |||||||| |||||||    
T  12271081 ttttcaaagtgtagat 12271096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 16983391 - 16983530
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||||||| |||| || |||||  || ||||||| |||| | | |||||| |||||||||||| |||||||||    
T  16983391 gaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaat 16983490  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| |||||| |||||||||||||||||| ||||||    
T  16983491 tttcaaagtgtagactcacaatgatttaaaccaataagag 16983530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 1977356 - 1977224
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||| |||||||||| ||||||||||||| || ||||| ||   ||||||||||| ||| ||||||  | |||||||||||||||||||    
T  1977356 gaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaat 1977257  T
Q  220 tttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||| ||||||| |||||||||||||||||    
T  1977256 tttcaaagtgtagatccacaatgatttaaacca 1977224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 8914768 - 8914907
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| | | |||||||||||| ||||| ||| ||||||| |||  ||| |||||| || ||||||||||||||||| |    
T  8914768 gaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatt 8914867  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| ||||||  ||||||||||||||||| ||||||    
T  8914868 tttcaaagtgtagacccacaatgatttaaaccaataagag 8914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 8903858 - 8903988
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| |||| |||||||||||||  | |||||| || ||| |||||||| ||| |||||| || |||||||||| ||||||||||||||| |    
T  8903858 tagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagt 8903957  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  ||||||||||||||||| ||||||    
T  8903958 gtagacccacaatgatttaaaccaataagag 8903988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 32072103 - 32072233
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| |||||||| ||||||||||||| || ||||| ||| |||||||||||| ||| |||||| || |||||||||||||||||||||| ||| |    
T  32072103 tagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagt 32072202  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  |||||| ||||||| || ||||||    
T  32072203 gtagacccacaattatttaaatcaataagag 32072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 17499389 - 17499277
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    ||||||||||||| || ||  | ||| |||||||||||| |||||||||| || || ||||||| ||||||||||||||| ||||||| |||||||||||    
T  17499389 aacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgattt 17499290  T
Q  247 aaaccactaagag 259  Q
    |||||| ||||||    
T  17499289 aaaccaataagag 17499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 28414040 - 28413920
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| ||||||||||||| |  ||||||||| ||| |||||||| ||| |||||| || ||||||||||| |||||||||||||| | ||    
T  28414040 caacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtata 28413941  T
Q  232 gattcacaatgatttaaacca 252  Q
    ||  || ||||||||||||||    
T  28413940 gacccataatgatttaaacca 28413920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 9952920 - 9952802
Alignment:
Q  140 acttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcaca 239  Q
    |||||| ||||||||||||| || ||| ||||| |||||||||||| |||  ||||| || ||||||||||| |||||||||||||| |||| |  ||||    
T  9952920 acttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccaca 9952821  T
Q  240 atgatttaaaccactaaga 258  Q
    ||||||||||||| |||||    
T  9952820 atgatttaaaccaataaga 9952802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 7493514 - 7493386
Alignment:
Q  136 actcacttttaaacactctctctaacagtcactttttaattggatgaaat----taatatatgtctcatcactttgtgt-gggttcaattttcaaaatgt 230  Q
    ||||||||||||||||||||||||||| | | ||||| ||||||||||||    || | | ||||| | |||||||||| |||||| ||||||||| |||    
T  7493514 actcacttttaaacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggttctattttcaaagtgt 7493415  T
Q  231 agattcacaatgatttaaaccactaagag 259  Q
    ||| |||||||||||||||||| ||||||    
T  7493414 agactcacaatgatttaaaccaataagag 7493386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 259
Target Start/End: Complemental strand, 24056098 - 24055969
Alignment:
Q  130 agcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatg 229  Q
    |||||||||||||||| ||| |||||| || || || || ||| ||  |||||||||||| |||||| || ||||||||||  |||||||||||||| ||    
T  24056098 agcaacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtg 24055999  T
Q  230 tagattcacaatgatttaaaccactaagag 259  Q
    ||||  |||||| |||||||||| ||||||    
T  24055998 tagacccacaattatttaaaccaataagag 24055969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 5979886 - 5980005
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||| |||||| |||||||||||||  || |||| ||  ||||||||| || ||| |||||| || |||||||||||||||||||||||||| |    
T  5979886 tagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagt 5979985  T
Q  229 gtagattcacaatgatttaa 248  Q
    ||  | |||||||| |||||    
T  5979986 gtgaactcacaatggtttaa 5980005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 23685137 - 23685265
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||||||||  |||||||||  | || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| |||| |||| |    
T  23685137 tagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagt 23685236  T
Q  229 gtagattcacaatgatttaaaccactaag 257  Q
    |||||||| ||||||||||||||| ||||    
T  23685237 gtagattcgcaatgatttaaaccaataag 23685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 43506535 - 43506671
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| ||||||||||  |||| |||||||||| ||||||  ||| ||| |||||  || |||||||||||||||| |     
T  43506535 gaggaatgctagcaacactcacttttgaacactctct--aacactcacttttta-ttggatataatcaatgtatgttccaccactttgtgtgggttctac 43506631  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||  ||||||  ||||||||||||| ||| ||||||    
T  43506632 tttcaatgtgtagacccacaatgatttaagccaataagag 43506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 35689490 - 35689588
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||| ||||| | ||||||||||| || ||||||||| |||||||||||| ||| |||||| || |||||| |||| |||| ||||||||| ||||    
T  35689490 aacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgta 35689588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 6098931 - 6098821
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||||| |||| |||| || ||||||||||| |||||  | || |||||||||   |||||||||||||| ||||||| |||||| ||||    
T  6098931 aacactctctctaacactcacatttttataggatgaaattagtatat--cccaccactttgtgcatgttcaattttcaaagtgtagatccacaataattt 6098834  T
Q  247 aaaccactaagag 259  Q
    ||| || ||||||    
T  6098833 aaatcaataagag 6098821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 36804995 - 36804883
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||| | | ||| | | |||||||| ||| ||| |||||| || || ||||||||||||||||||||||||| || || |||||| ||||    
T  36804995 aacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataattt 36804896  T
Q  247 aaaccactaagag 259  Q
    ||| || ||||||    
T  36804895 aaatcaataagag 36804883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 34861368 - 34861264
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||| | ||||||||| ||||||||||  | || ||||| ||| |||||||||||| ||| |||||| || |||||||||| ||||||||    
T  34861368 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaat 34861271  T
Q  220 tttcaaa 226  Q
    |||||||    
T  34861270 tttcaaa 34861264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 35151903 - 35151782
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||||||| | || || | ||| ||| |||||||||||| ||| |||||| || || |||||| || ||||||||| ||| |    
T  35151903 tagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagt 35151804  T
Q  229 gtagattcacaatgatttaaac 250  Q
    |||||  |||||| ||| ||||    
T  35151803 gtagacccacaataattcaaac 35151782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 35797426 - 35797534
Alignment:
Q  154 tctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccac 253  Q
    |||||| || ||||| ||| ||||||| |||| ||| |||||  || ||||||||| | |||||||||| ||| |||| || |||||||||||||| ||     
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaa 35797525  T
Q  254 taagagtga 262  Q
    |||||||||    
T  35797526 taagagtga 35797534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 9192079 - 9192126
Alignment:
Q  201 cactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaa 248  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  9192079 cactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 13214539 - 13214605
Alignment:
Q  167 ctttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtaga 233  Q
    |||||| |||||||| ||||||| |||||| ||||| ||||||| | ||||||||||||| ||||||    
T  13214539 cttttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtaga 13214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 17716862 - 17716977
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| | |||||| |  |||| ||||  ||| |||||||||||| |||||||||| ||  | ||| |||||||| |||||||||| ||||    
T  17716862 caacactcacttttcatcactcttt--aacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgta 17716959  T
Q  232 gattcacaatgatttaaa 249  Q
    ||  |||||||| |||||    
T  17716960 gacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 31301125 - 31301250
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||||||||| |||||| | ||   || ||||| ||| |||||||||||| ||| |||||  || ||||||||||| |||| ||||||||  |||||    
T  31301125 aacactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtag 31301224  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
    | ||| ||| |||||||||| ||||||    
T  31301225 a-tcataataatttaaaccaataagag 31301250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 13407497 - 13407396
Alignment:
Q  130 agcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatg 229  Q
    ||||||||||  ||||  ||||||||||||||| | ||||||| ||||||| |||| ||| |||||| || || |||  |||||||| ||||||||| ||    
T  13407497 agcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtg 13407398  T
Q  230 ta 231  Q
    ||    
T  13407397 ta 13407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 18413620 - 18413555
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctca 199  Q
    |||||| |||||||||| ||||||||||  ||| | ||| |||| |||||||||||||||||||||    
T  18413620 acactctcttttaaacattctctctaacgttcattcttttattgaatgaaattaatatatgtctca 18413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 45246442 - 45246570
Alignment:
Q  133 aacactcactttt--aaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgt 230  Q
    |||||||||||||  | ||||||||| || || ||||| ||| ||||||| |||| ||| ||||||||| |||||| || | |||| |||| |||| |||    
T  45246442 aacactcacttttgcacacactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgt 45246541  T
Q  231 agattcacaatgatttaaaccactaagag 259  Q
    ||||   |||||||||||| || ||||||    
T  45246542 agatctgcaatgatttaaatcaataagag 45246570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 41727439 - 41727559
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| |||||||||| || || ||||| |||  || ||| |||| ||| |||||| || | |||||||| |||||  |||| ||  ||||    
T  41727439 caacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgta 41727538  T
Q  232 gattcacaatgatttaaacca 252  Q
    || ||| ||||||||||||||    
T  41727539 gactcataatgatttaaacca 41727559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 1205833 - 1205936
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| | |||||||| || || ||||| ||| ||| | | |||||||| ||||||||| |||||| | ||||||| |||| |||| |    
T  1205833 tagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttccaaagt 1205932  T
Q  229 gtag 232  Q
    ||||    
T  1205933 gtag 1205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 11962855 - 11962733
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||| |||||||||||| ||||| |||| ||| | ||||| ||| |||| || |||| ||  ||| || || || ||| ||| ||||||||||||||| |    
T  11962855 tagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagt 11962756  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||| || ||||||||||||||    
T  11962755 gtagatcca-aatgatttaaacca 11962733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 28212038 - 28211967
Alignment:
Q  151 ctctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaatttt 222  Q
    ||||||||| || |||||| || ||||| |||||| ||||||||||||| || ||| ||||||||| |||||    
T  28212038 ctctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttt 28211967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 4674917 - 4675035
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||||||||||  ||||||| ||| | ||||| ||| ||| |||||||| |||    |||  ||||||||||||| ||| |||||||||| |    
T  4674917 tagcaacattcacttttaat-actctctttaaaactcactcttttattagatgaaatcaat----gtcctatcactttgtgtgagtttaattttcaaagt 4675011  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    ||||   |||||||||||||||||    
T  4675012 gtagtcacacaatgatttaaacca 4675035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 4319907 - 4319803
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||| ||||||| || | | ||| || || | ||||||| ||| ||| |||| |||  ||||||||||||||||||||  || |||||||||| |    
T  4319907 tagcaacacccacttttcaatattttctttagcatttacttttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagt 4319808  T
Q  229 gtaga 233  Q
    |||||    
T  4319807 gtaga 4319803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 7599605 - 7599509
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttc 216  Q
    ||||| || |||||||||||  |||| ||||||||||||| ||   ||| ||| |||||||||||| ||| ||| || || |||||| |||||||||    
T  7599605 gaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttc 7599509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 10868036 - 10868096
Alignment:
Q  168 tttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||| |||||||||| | ||| ||||| ||| || ||||||||| |||||||||||||||    
T  10868036 ttttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaattttcaaaat 10868096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 34952458 - 34952498
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaa 160  Q
    ||||| || ||||||||||||||||| ||||||||||||||    
T  34952458 gaggaatgctagcaacactcactttttaacactctctctaa 34952498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 26980433 - 26980306
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| |||||||||||||| | ||||| | | |||||||||||| ||| |||||| || || |||||||| |||||||||||||||| ||    
T  26980433 caacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatata 26980334  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
     || |||||||||||||| || ||||||    
T  26980333 catccacaatgatttaaatcaataagag 26980306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 49730857 - 49730993
Alignment:
Q  116 atatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggtt 215  Q
    ||||||||| ||  |||||| |||| | || |||||||||| ||||| ||||| ||| ||| ||| ||| ||||||||||| ||  ||||||||||||||    
T  49730857 atatgaggaatgacagcaacgctcattcttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggtt 49730956  T
Q  216 caattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||||| ||||||  |||||||||||||||||    
T  49730957 caattttcaaagtgtagacccacaatgatttaaacca 49730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 10659943 - 10659812
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcacttttta-attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaa 227  Q
    ||||||||||||||||| || ||||||||||||| |||||||||  || ||||||||| |||  |||||  | |||||||||| |||||||||||||||     
T  10659943 tagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaag 10659844  T
Q  228 tgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||  ||| ||||||||||||| ||||||    
T  10659843 tgtagacccacgatgatttaaaccaataagag 10659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 11987635 - 11987762
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| ||||||||||| |||| | | |  || |||||||||||||||| |||||  || ||||| ||| |||||||||||||||| ||||    
T  11987635 caacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgta 11987734  T
Q  232 gattcacaatgatttaaaccactaagag 259  Q
    ||  ||||||||||||||||| ||||||    
T  11987735 gacccacaatgatttaaaccattaagag 11987762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 8899020 - 8899150
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||| || |||||||| |  || ||||||| |||||||| ||  |||||| || | |||||||||||||||||||||||| |    
T  8899020 tagcaacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagt 8899119  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||| | |||||| |||||||||| ||||||    
T  8899120 gtaggtccacaataatttaaaccaataagag 8899150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 28218222 - 28218118
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| |||| ||| |||||| || || ||||| ||| |||||||||||| ||| ||||||||| |||||||||||| ||||||||||||| |    
T  28218222 tagcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagt 28218123  T
Q  229 gtaga 233  Q
    |||||    
T  28218122 gtaga 28218118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 6133807 - 6133669
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| |||| |||||||| || ||||  ||| |||||||||||| |||||||||| || ||  |||||||||||||||    
T  6133807 gaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaat 6133708  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| | || |  |||||||| |||||||| ||||||    
T  6133707 tttcaaagtctacacccacaatga-ttaaaccaataagag 6133669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 25543337 - 25543427
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgt 210  Q
    ||||| || |||||||||||||||||||||||||||||||||| | ||| ||| ||| |||||||| |||||||||| || ||||||||||    
T  25543337 gaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgt 25543427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 8741399 - 8741267
Alignment:
Q  129 tagcaacactcacttttaaacactctctct--aacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    ||||||||||||||||| || |||||||||  |   |||||||||| |||||||||||| ||| |||||||||  | |||||||||||||||||||||||    
T  8741399 tagcaacactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaa 8741300  T
Q  227 atgtagattcacaatgatttaaaccactaagag 259  Q
     | || |  ||||||||||||||| | ||||||    
T  8741299 gtataaacacacaatgatttaaactaataagag 8741267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 37553110 - 37552993
Alignment:
Q  142 ttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaat 241  Q
    |||| ||||||||||||| || | ||||| | |||||||||||||||| | |||| |||||||||  |||||||  ||||||||| ||||||| ||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaat 37553011  T
Q  242 gatttaaaccactaagag 259  Q
    |||||||| || ||||||    
T  37553010 gatttaaatcaataagag 37552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 931371 - 931503
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||||||||| ||| || ||||||| | ||||| ||| |||| ||| ||  ||| |||||| ||||| ||| ||||||||||||    
T  931371 gaggaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaat 931470  T
Q  220 tttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||| || |  |||||||||||||||||    
T  931471 tttcaaaatatacacccacaatgatttaaacca 931503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 33193066 - 33193186
Alignment:
Q  139 cacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcac 238  Q
    ||||||| |||| ||||| ||| | |||||| || |||||||||||| ||| |||||  || || |||||| |||||||||||||||| ||||||  |||    
T  33193066 cactttttaacattctctataatactcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccac 33193165  T
Q  239 aatgatttaaaccactaagag 259  Q
    |||||||||||||| ||||||    
T  33193166 aatgatttaaaccaataagag 33193186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 3872807 - 3872685
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||  |||  || |||| |||||||||| || |||||||||| |||||||||| |||| |    
T  3872807 tagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttccaaagt 3872709  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||  |||||||||| ||||||    
T  3872708 gtagacccacaatgattcaaacca 3872685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 30679038 - 30678955
Alignment:
Q  176 tggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||| |||| ||| |||||| || |||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||    
T  30679038 tggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagag 30678955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 19101775 - 19101646
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| ||||||||| |    
T  19101775 tagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagt 19101676  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    ||||||   ||||||||||||||| |||||    
T  19101675 gtagatctgcaatgatttaaaccaataaga 19101646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 35336872 - 35336996
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||||||||| |||| || ||||| || ||| | ||| |||||||||||| |    |||||||| |||||||||||||||||||||||  |||    
T  35336872 tagcaacactcacttttcaaca-tc-ctctagcactcattattttattggatgaaatca----atgtctcaccactttgtgtgggttcaattttcttaat 35336965  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||  ||||||||||||||||| ||||||    
T  35336966 gtagacacacaatgatttaaaccaataagag 35336996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 259
Target Start/End: Original strand, 41958081 - 41958219
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || ||| ||||||||||||| |||||||||   | || |||||  || |||||||||||| ||| |||||| || || |||||| ||||||||    
T  41958081 tgaggaatgctagtaacactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaa 41958178  T
Q  219 ttttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||| ||||||  |||| |||||||||||| ||||||    
T  41958179 ttttcaaagtgtagacccacagtgatttaaaccaataagag 41958219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 22540374 - 22540502
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| |||| |||| |    
T  22540374 tagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagt 22540473  T
Q  229 gtagattcacaatgatttaaaccactaag 257  Q
    |||||| | ||||||||||||||| ||||    
T  22540474 gtagatccgcaatgatttaaaccaataag 22540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 41095783 - 41095680
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| | ||||||||||| || |||||  || ||||| |||||| ||| |||||| ||||||| ||||||||||| ||||||||| |    
T  41095783 tagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagt 41095684  T
Q  229 gtag 232  Q
    ||||    
T  41095683 gtag 41095680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 11135734 - 11135848
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || ||||||||||| ||||| | ||||||||||| || ||||| ||| ||||| |||||| ||| |||||| || |||||| |||||||||     
T  11135734 atgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 11135833  T
Q  218 attttcaaaatgtag 232  Q
    |||| |||| |||||    
T  11135834 atttccaaagtgtag 11135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 29673499 - 29673604
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||||| ||| | ||| ||||||| |||| |||||||||| || || ||||||| | ||||||||||||| ||||||   ||||| ||||    
T  29673499 aacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattattt 29673598  T
Q  247 aaacca 252  Q
    ||||||    
T  29673599 aaacca 29673604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 18157049 - 18157121
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt 206  Q
    |||||| ||||| ||||||||||||||||  |||||||| |||||||||||||||| |||||| || ||||||    
T  18157049 acactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 27570234 - 27570348
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| |||||||| |||||||||||| ||| ||| | ||| ||||| ||||||||| ||||||| || || |||||||| ||| |||||| ||| ||||    
T  27570234 caacagtcactttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgta 27570333  T
Q  232 gattcacaatgattt 246  Q
     |  |||||||||||    
T  27570334 aacccacaatgattt 27570348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 32848768 - 32848654
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || || |||||||| ||||| ||||||||||||| || ||||| ||| ||||| |||||| | | |||||| || |||||| ||||| |||     
T  32848768 atgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattcc 32848669  T
Q  218 attttcaaaatgtag 232  Q
    ||||||||| |||||    
T  32848668 attttcaaagtgtag 32848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 36566925 - 36567007
Alignment:
Q  152 tctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagat 234  Q
    ||||| ||||| | ||| ||| |||||||||||| ||| |||||||||||||||| | ||||||| ||||||||| |||||||    
T  36566925 tctctttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagat 36567007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 39499349 - 39499427
Alignment:
Q  168 tttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    ||||| ||||||| |||||||| ||||| | || | ||| |||||||| |||||| |||||||||||||||||||||||    
T  39499349 ttttttattggataaaattaatgtatgttttataattttttgtgggtttaatttttaaaatgtagattcacaatgattt 39499427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 39499453 - 39499519
Alignment:
Q  182 aaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaa 248  Q
    |||| ||| ||||||  |||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  39499453 aaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaa 39499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 13388331 - 13388396
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    ||||| || ||||||||||| ||||| || ||||||||||||| ||||||||| ||||||||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaat 13388396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 14341083 - 14341018
Alignment:
Q  141 cttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcacttt 206  Q
    ||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||||||| || ||||||    
T  14341083 cttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccacttt 14341018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 15523219 - 15523344
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| ||||  ||| ||||    
T  15523219 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15523318  T
Q  232 gattcacaatgatttaaaccactaag 257  Q
    ||| | ||||||||||||||| ||||    
T  15523319 gatccgcaatgatttaaaccaataag 15523344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 15531213 - 15531338
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| |||||| || |||||| || | |||| ||||  ||| ||||    
T  15531213 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15531312  T
Q  232 gattcacaatgatttaaaccactaag 257  Q
    ||| | ||||||||||||||| ||||    
T  15531313 gatccgcaatgatttaaaccaataag 15531338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 44271915 - 44272044
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||  |||||||||||||||||| || || | ||| ||| |||| ||||||| ||| |||||  || || ||| ||| ||||||||    
T  44271915 gaggaatgctagcaacatccacttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaat 44272014  T
Q  220 tttcaaaatgtagattcacaatgatttaaa 249  Q
    ||||||| ||||||   |||||||||||||    
T  44272015 tttcaaagtgtagaacaacaatgatttaaa 44272044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 32211940 - 32211828
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    ||||||||||| | || ||||| ||| ||| |||||||| ||| ||||||  |  |||||||||| |||||||||| ||  ||||||  |||||||||||    
T  32211940 aacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgattt 32211841  T
Q  247 aaaccactaagag 259  Q
    |||||| ||||||    
T  32211840 aaaccaataagag 32211828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 41948310 - 41948190
Alignment:
Q  139 cacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcac 238  Q
    ||||||| |||||| | ||||| | ||||| ||| ||||||| |||| ||| ||| |   | |||||||||| ||||||||||||||| |||| || |||    
T  41948310 cactttttaacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccac 41948211  T
Q  239 aatgatttaaaccactaagag 259  Q
    ||||||||||| || ||||||    
T  41948210 aatgatttaaatcaataagag 41948190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 2225223 - 2225359
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||| |||||||| |||| ||||||||||  | ||  |||| ||| |||||||||||| ||| |||||| || ||||||||||||||||  |    
T  2225223 gaggaatgctagtaacactcaattttcaacactctct--agcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggt 2225320  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    || |||| ||||||   ||| |||||||||||| |||||    
T  2225321 ttacaaagtgtagaccgacagtgatttaaaccaataaga 2225359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 14094163 - 14094072
Alignment:
Q  141 cttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||| ||||||||||| | || ||||||||| ||||| |||||| ||| |||||| || |||||| ||||||||| |||| |||| |||||    
T  14094163 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 14094072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 41918001 - 41918104
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    ||||||||||| ||||| | ||| ||||||| || ||||| ||| ||||| |||||| ||| |||||| || |||||| ||||| ||| ||||||||| |    
T  41918001 tagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagt 41918100  T
Q  229 gtag 232  Q
    ||||    
T  41918101 gtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 13114844 - 13114742
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||| |||||| |||||  ||||||||||||||| ||||| ||| ||| ||| |||| |||||||||| || |||||| | ||| ||| |||| ||||||    
T  13114844 tagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaat 13114745  T
Q  229 gta 231  Q
    |||    
T  13114744 gta 13114742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 15468288 - 15468346
Alignment:
Q  191 tatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    |||||||||| ||||||||||||||||||||||| | ||||||  |||||| |||||||    
T  15468288 tatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaa 15468346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 27794160 - 27794290
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||||||||||| |   ||| || || |||| |||| |||  || ||||| || ||||| | || |||||| |||||||| |||||||||||    
T  27794160 tagcaacactcacttttaaatataatctttagcactcacatttttattaaataaaattgatgtatgtttgattactttgagtgggttctattttcaaaat 27794259  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
     |||||| ||| |||||||||| | ||||||    
T  27794260 atagattgacagtgatttaaactaataagag 27794290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 33060066 - 33059937
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||| ||||||||||  | ||  ||| ||||||||||| ||| |||||||||||||||   ||||| || |||| | |||||||| |||||| ||| |    
T  33060066 tagcaatactcacttttctatacattctttaacagtcactcttttattggatgaaattaaagcatgtc-caccactctctgtgggtttaatttttaaagt 33059968  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    ||| | |||||||| ||||||||| ||||||    
T  33059967 gtacactcacaatgttttaaaccaataagag 33059937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 743425 - 743546
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||| ||||||| |||| |||||||||| ||| | ||| || || |||||||||||| ||| |||||  ||||||||||||   ||| ||||||||||||    
T  743425 tagccacactcattttttaacactctctttaaaattcaattgtttattggatgaaatcaatgtatgttccatcactttgtggaagtttaattttcaaaat 743524  T
Q  229 gtagattcacaatgatttaaac 250  Q
      |||   ||||||||||||||    
T  743525 agagacctacaatgatttaaac 743546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 15928579 - 15928684
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    ||||||||||||| ||  |||| ||| ||| |||| |||| || ||||||||| || |||||||| |||| ||||||||  |||||| | ||| ||||||    
T  15928579 aacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgattt 15928678  T
Q  247 aaacca 252  Q
    ||||||    
T  15928679 aaacca 15928684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 31074725 - 31074838
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||  ||| ||||||||| |||||| | ||| ||| ||| |||||||| |||| |||||  | |||||| ||| | ||| ||||||||||||||    
T  31074725 caacactcatgtttgaacactctccctaacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaatgta 31074824  T
Q  232 gattcacaatgatt 245  Q
    ||  ||||||||||    
T  31074825 gacccacaatgatt 31074838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 50773263 - 50773186
Alignment:
Q  151 ctctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| ||||| ||| ||||||| |||| |||||||||  || |||||| ||||||||| |||| ||||||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccatttccaaaat 50773186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 44739115 - 44739227
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||| ||||| ||||||||||||| || ||||| |||  |||  |||||||||| |||||| || |||||| |||| |||  ||    
T  44739115 gaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtat 44739214  T
Q  220 tttcaaaatgtag 232  Q
    || |||| |||||    
T  44739215 ttccaaagtgtag 44739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 15906485 - 15906536
Alignment:
Q  198 catcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaa 249  Q
    ||||||||||||||   ||||||| ||||||||||||| |||||||||||||    
T  15906485 catcactttgtgtgaactcaatttacaaaatgtagatttacaatgatttaaa 15906536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 33113977 - 33114100
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||| |||| |||||||| ||| ||| ||| | ||||||| | ||| | | |||| | | |||||| || || ||| ||| ||||||||||||||| |    
T  33113977 tagcaatactctcttttaaatactttctttaatactcactttcttattagtttaaatcattgtatgtcccaccattttatgtaggttcaattttcaaagt 33114076  T
Q  229 gtagattcacaatgatttaaacca 252  Q
    |||||| || ||||||||||||||    
T  33114077 gtagatccagaatgatttaaacca 33114100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 50424864 - 50424918
Alignment:
Q  124 agtggtagcaacactcacttttaaacactctctctaacagtcactttttaattgg 178  Q
    |||| ||||||||||| ||||||  |||||||||||||| ||||||||| |||||    
T  50424864 agtgctagcaacactctcttttaggcactctctctaacattcacttttttattgg 50424918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 28274797 - 28274866
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcac 203  Q
    |||||| ||||| |||||||||||||||| ||||| | | ||||||||||| || | |||||| ||||||    
T  28274797 acactctcttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccatcac 28274866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 37525560 - 37525665
Alignment:
Q  154 tctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccac 253  Q
    ||||||||| ||||| ||| ||||||| |||   || |||||  || || ||| ||||||||||||||||||| | |||||  |||||||||||||| |     
T  37525560 tctctaacattcactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaa 37525659  T
Q  254 taagag 259  Q
    ||||||    
T  37525660 taagag 37525665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 39039529 - 39039473
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    ||||||||||||||||| |||||||| | || || ||||| ||| ||||||||||||    
T  39039529 tagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaat 39039473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 41330531 - 41330438
Alignment:
Q  165 cactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaaga 258  Q
    |||| ||| ||| |||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataaga 41330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 28490905 - 28490766
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||| |||||||| || |||||||||| || ||||||||| |||||||||||| ||  |||||| || ||||||||||  |||||||    
T  28490905 gaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaat 28490806  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||| ||| ||||||  |||||| |||||||||| ||||||    
T  28490805 tttgaaagtgtagacccacaataatttaaaccaataagag 28490766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 34368357 - 34368496
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||||| | |||| |||||| ||||||||| ||||| ||| ||||||| |||  ||| |||||  || ||||||||||||||||| |    
T  34368357 gaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatt 34368456  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| ||||||  ||||||||||||||||| ||||||    
T  34368457 tttcaaagtgtagacccacaatgatttaaaccaataagag 34368496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 4714764 - 4714878
Alignment:
Q  138 tcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattca 237  Q
    |||||||| ||| |||| | ||||| ||||||||| ||||||| |||||| | | |||| ||||| ||||||||||||| ||||||||||||||||| ||    
T  4714764 tcacttttgaaccctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagataca 4714863  T
Q  238 caatgatttaaacca 252  Q
    |||||||||| ||||    
T  4714864 caatgatttatacca 4714878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 25919266 - 25919340
Alignment:
Q  178 gatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||| ||||||||||||| || |||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaacca 25919340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 17537287 - 17537146
Alignment:
Q  118 atgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttca 217  Q
    ||||||| || || ||| |||||||||| ||||||||||||| || ||||| ||| ||| ||| |||| ||| |||||| || || ||| ||| |||| |    
T  17537287 atgaggaatgataacaatactcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggttta 17537188  T
Q  218 attttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||||| ||||||| || |||||||||||||| ||||||    
T  17537187 attttcaaagtgtagatccataatgatttaaaccaataagag 17537146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 32050331 - 32050410
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    ||||||||||||| || ||| | ||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  32050331 aacactctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaa 32050410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 259
Target Start/End: Original strand, 39246605 - 39246744
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || |||||||| |||||||| | ||  |||||||||| ||||||| | ||||||| |||| ||| |||||| || ||||||||||| ||||| |    
T  39246605 gaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagt 39246704  T
Q  220 tttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||||| ||||||  ||||||  ||||||||| ||||||    
T  39246705 tttcaaagtgtagacccacaatactttaaaccaataagag 39246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 30326048 - 30325919
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||| ||||||||  ||||||||| || || ||||| ||| |||||||||||| ||| ||||||||| |||||| || | |||| || | |||| |    
T  30326048 tagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagt 30325949  T
Q  229 gtagattcacaatgatttaaaccactaaga 258  Q
    |||||| | ||||||||||||||| |||||    
T  30325948 gtagatccgcaatgatttaaaccaataaga 30325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 5413876 - 5413788
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||| ||| |||||||||||| ||| |||||| || ||||||||||||||||||||| |||| ||||||  || ||||||||||||||    
T  5413876 tcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaacca 5413788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 27592622 - 27592496
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    ||||||| |||||  ||||||||| || || ||||| ||| |||||||||||| ||| ||||||||| |||||| || | |||| |||| |||| |||||    
T  27592622 aacactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtag 27592523  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
    ||   ||||||||||||||| ||||||    
T  27592522 atctgcaatgatttaaaccaataagag 27592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 28611949 - 28611832
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    |||||||||||||| | |||||||||||||| ||||| ||| |||||||  ||  | | |||||| ||||||||||| || |||| ||||| ||| ||||    
T  28611949 caacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttttaaagtgta 28611850  T
Q  232 gattcacaatgatttaaa 249  Q
    ||  ||||||||||||||    
T  28611849 gacgcacaatgatttaaa 28611832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 4959275 - 4959387
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaat 219  Q
    ||||| || ||||||||||| ||||| | |||||||||||| |  |||| ||| ||||| |||||| ||| |||||||||||| ||| ||||||||  ||    
T  4959275 gaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttacat 4959374  T
Q  220 tttcaaaatgtag 232  Q
    ||||||| |||||    
T  4959375 tttcaaagtgtag 4959387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 28434972 - 28434863
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||||| | | | ||| ||||||| |||| |||||||||| || ||||  |||| ||||||||||||||| | ||||  |||||||||||    
T  28434972 aacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccact--gtgttggttcaattttcaaagtttagacccacaatgattt 28434875  T
Q  247 aaaccactaaga 258  Q
    |||||| |||||    
T  28434874 aaaccaataaga 28434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 2525583 - 2525700
Alignment:
Q  132 caacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgta 231  Q
    ||||||||| |||| |||||||||| ||||| ||  ||||| |||||||||||| ||| ||| | ||| |||||||||||  |||  |||||||| ||||    
T  2525583 caacactcattttttaacactctctttaacactcgtttttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgta 2525682  T
Q  232 gattcacaatgatttaaa 249  Q
     || || |||||||||||    
T  2525683 aatacataatgatttaaa 2525700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 42224775 - 42224662
Alignment:
Q  119 tgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaa 218  Q
    |||||| || ||||||||||| ||||| | ||||||||||| || ||||| ||| ||| | |||||| ||| |||||| || |||||| ||||||||| |    
T  42224775 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttcca 42224676  T
Q  219 ttttcaaaatgtag 232  Q
    ||| |||| |||||    
T  42224675 tttccaaagtgtag 42224662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 1923725 - 1923597
Alignment:
Q  130 agcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatg 229  Q
    ||||||| |||||||| || |||||  ||| || |  |||||| ||| |||| ||  ||| |||||| || ||||||||||| |||||||||| ||| ||    
T  1923725 agcaacattcacttttcaatactctacctaccactttcttttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaatttttaaagtg 1923626  T
Q  230 tagattcacaatgatttaaaccactaaga 258  Q
    ||| || |||||||||||||||| |||||    
T  1923625 tagttttacaatgatttaaaccaataaga 1923597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 34384863 - 34384747
Alignment:
Q  131 gcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgt 230  Q
    ||||| ||||||||| || ||| ||| ||||| ||| | ||| ||||| |||||| ||| |||||| ||  | |||||||| |||||||||||||| | |    
T  34384863 gcaacgctcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattat 34384764  T
Q  231 agattcacaatgattta 247  Q
    ||| |||||||||||||    
T  34384763 agactcacaatgattta 34384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 259
Target Start/End: Complemental strand, 10142148 - 10142020
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaat 228  Q
    |||||||||||| |||| ||||  |||| || || ||||| ||| ||||||| |||| ||| |||||| || |||||||||| ||||| ||||||||| |    
T  10142148 tagcaacactcatttttcaaca--ctctatagcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagt 10142051  T
Q  229 gtagattcacaatgatttaaaccactaagag 259  Q
    |||||   ||||| ||||||| || ||||||    
T  10142050 gtagaccaacaattatttaaatcaataagag 10142020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 36338015 - 36337941
Alignment:
Q  178 gatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||||||||||| |||||| ||| | |||||||  ||||||||| |||| ||||||  |||||||||||||||||    
T  36338015 gatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatttaaacca 36337941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 37455359 - 37455484
Alignment:
Q  133 aacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtag 232  Q
    |||||||| |||| ||||||||||||| ||  ||||  || ||| ||| |||| ||| |||||  || || |||||| |||||||||||||||| |||||    
T  37455359 aacactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtag 37455458  T
Q  233 attcacaatgatttaaaccactaagag 259  Q
    | ||||||| | |||||||| ||||||    
T  37455459 actcacaat-aattaaaccaataagag 37455484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28090353 - 28090280
Alignment:
Q  179 atgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||| |||  ||||| || ||||||||||| |||||||||||||| | |||||  ||||||||||||||||    
T  28090353 atgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaacca 28090280  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 36494241 - 36494306
Alignment:
Q  141 cttttaaacactctctctaacagtcact-ttttaattggatgaaattaatatatgtctcatcactt 205  Q
    |||||||||| ||||||||||| | ||| ||||||||||||||||||||| || |||||| |||||    
T  36494241 cttttaaacattctctctaacacttactcttttaattggatgaaattaatgtacgtctcaccactt 36494306  T

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Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 1649561 - 1649621
Alignment:
Q  134 acactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatg 194  Q
    |||||| ||||| |||||||||||||||| ||||| | | |||||||||||||||| ||||    
T  1649561 acactctcttttcaacactctctctaacactcactatcttattggatgaaattaatgtatg 1649621  T

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Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 252
Target Start/End: Original strand, 25630796 - 25630936
Alignment:
Q  112 atttatatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtg 211  Q
    ||||| ||||| | || |||||| ||| |||||| |||||||||| ||||| | ||| ||| |||  || |||||||| ||| || ||  | ||||| |     
T  25630796 atttacatgagaaatgctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtata 25630895  T
Q  212 ggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||||||||| ||||||  ||| |||||||||||||    
T  25630896 ggttcaattttcaaagtgtagacccacgatgatttaaacca 25630936  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 41105726 - 41105614
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||| ||| | | ||| ||| |||||||||||| ||   ||||| ||  ||||||||||||||||||||||||| || | |  |||| ||||||    
T  41105726 aacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgattt 41105627  T
Q  247 aaaccactaagag 259  Q
    |||||| ||||||    
T  41105626 aaaccaataagag 41105614  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 43541910 - 43541954
Alignment:
Q  182 aaattaatatatgtctcatcactttgtgtgggttcaattttcaaa 226  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  43541910 aaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaa 43541954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 43405434 - 43405529
Alignment:
Q  164 tcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    ||||| ||| |||| ||||||| ||| ||||||||| |||||||| |  |||| |||| |||| ||||||  |||||||||||||| || ||||||    
T  43405434 tcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagag 43405529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 31542397 - 31542323
Alignment:
Q  149 cactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttc 223  Q
    |||||||||||||| ||| || || ||||| |||||||||| || ||| ||||||||| ||||| ||| ||||||    
T  31542397 cactctctctaacactcatttatttattgggtgaaattaatgtacgtcccatcactttatgtggattccattttc 31542323  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 40971447 - 40971505
Alignment:
Q  120 gaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattgg 178  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||| ||||| ||| |||||    
T  40971447 gaggagtgctagcaacactctcttttgaacactctatctaacactcactattttattgg 40971505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 6264071 - 6264002
Alignment:
Q  116 atatgaggagtggtagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaat 185  Q
    |||||||||||| ||||||||||| ||||||| |||||| |||| || ||||| ||| | ||| ||||||    
T  6264071 atatgaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaat 6264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 10253232 - 10253164
Alignment:
Q  153 ctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattt 221  Q
    |||||||||| ||||| ||  |||||||||||||||| |||||| || |||||| |||| |||| ||||    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctattt 10253164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 28223950 - 28223827
Alignment:
Q  129 tagcaacactcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatc-actttgtgtgggttcaattttcaaaa 227  Q
    ||||||||||||||||| ||||||  || ||||| | | | ||| |||| ||||||||| | ||||| ||| | | |||||||||| ||||||||||||     
T  28223950 tagcaacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgt-tcaccaattttgtgtgggctcaattttcaaag 28223852  T
Q  228 tgtagattcacaatgatttaaacca 252  Q
    | ||||  || ||||||||||||||    
T  28223851 tatagacccataatgatttaaacca 28223827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 31885922 - 31885882
Alignment:
Q  212 ggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    ||||||||||||||| |||||||  ||||||||||||||||    
T  31885922 ggttcaattttcaaagtgtagatctacaatgatttaaacca 31885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 9688 - 9800
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| ||| || || || ||||||||||||||||||| ||| |||||| ||||||| ||||    
T  9688 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataattt 9787  T
Q  247 aaaccactaagag 259  Q
    |||| | ||||||    
T  9788 aaacgaataagag 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 11234 - 11346
Alignment:
Q  147 aacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgattt 246  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| ||| || || || ||||||||||||||||||| ||| |||||| ||||||| ||||    
T  11234 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataattt 11333  T
Q  247 aaaccactaagag 259  Q
    |||| | ||||||    
T  11334 aaacgaataagag 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 27863 - 27948
Alignment:
Q  174 attggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaaccactaagag 259  Q
    |||||||| ||| ||| |||||| || |||||||||||||||| |||| |||| ||||||  ||||||||||||||||| ||||||    
T  27863 attggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagag 27948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 204852 - 204759
Alignment:
Q  159 aacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaaacca 252  Q
    |||| |||| |||||||||||||||| |||  ||||||||||||||||||||  | |||||||| ||| |||||| | ||||| || |||||||    
T  204852 aacactcacattttaattggatgaaagtaaattatgtctcatcactttgtgtctgatcaatttttaaattgtagacttacaattatataaacca 204759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 27016 - 26913
Alignment:
Q  149 cactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattcacaatgatttaa 248  Q
    |||||||| ||||| ||||| | | ||||||  |||| ||| |||||  || ||||||||||||||||||||||||||  |||||  || |||| |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 26917  T
Q  249 acca 252  Q
    ||||    
T  26916 acca 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 2237 - 2346
Alignment:
Q  138 tcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattca 237  Q
    |||||||| || | |||||||| || ||||| ||| ||  |||||||| ||| |||||| ||  |||||||||||  |  ||||| ||||||||||| ||    
T  2237 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg--tgcatttttaaaatgtagatcca 2334  T
Q  238 caatgatttaaa 249  Q
    ||||||||||||    
T  2335 caatgatttaaa 2346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 2268 - 2377
Alignment:
Q  138 tcacttttaaacactctctctaacagtcactttttaattggatgaaattaatatatgtctcatcactttgtgtgggttcaattttcaaaatgtagattca 237  Q
    |||||||| || | |||||||| || ||||| ||| ||  |||||||| ||| |||||| ||  |||||||||||  |  ||||| ||||||||||| ||    
T  2268 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg--tgcatttttaaaatgtagatcca 2365  T
Q  238 caatgatttaaa 249  Q
    ||||||||||||    
T  2366 caatgatttaaa 2377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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