View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19058_high_71 (Length: 252)
Name: NF19058_high_71
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19058_high_71 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 48633260 - 48633045
Alignment:
| Q |
1 |
tttttaaacctctcaaatacacaatagttttccaagcatcgatcattgtagtttaagtgaccgtggtttccacatatatggttgtcaactgcaatctaca |
100 |
Q |
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| T |
48633260 |
tttttaaacctctcaaatacacaatagttttccaagcaacgatcattgtagtttaagtgactgtggtttccgcatatatggttttaaactgcaatctaca |
48633161 |
T |
|
| Q |
101 |
actgtacatgagtttgtgacgtcaatgttttacaaccaaatatatgtaacaagattcacatccgtaagtgtgatttaaaaccttaatcacataatggatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48633160 |
actgtacatgagtttgtgacgtcaatgttttacaaccaaatatatgtaacacgattcacatccgtaagtgtgatttaaaaccttaatcacataatggatg |
48633061 |
T |
|
| Q |
201 |
acatctactatatatg |
216 |
Q |
| |
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|||||||||||||||| |
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| T |
48633060 |
acatctactatatatg |
48633045 |
T |
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