View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19058_low_41 (Length: 341)
Name: NF19058_low_41
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19058_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 9 - 325
Target Start/End: Complemental strand, 49087655 - 49087339
Alignment:
| Q |
9 |
agcagagacacgcttgtttgggttcttaatgaggatgttgaactgcaaggtggcggaaaggagcggtggtgaggttgtgttgaagccatagatggcagca |
108 |
Q |
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| T |
49087655 |
agcagagacacgcttgtttgggttcttaatgaggatgttgaactgcaaggtggcggaaaggagcggtggtgaggttgtgttgaagccatagatggcagca |
49087556 |
T |
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| Q |
109 |
ccgacaaccgtgaagtggggtttgtgtggacggtagacaagccagagaacaagtagagtgacaccgattagtaggagaaagatggtgaggaatgtggcaa |
208 |
Q |
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| T |
49087555 |
ccgacaaccgtgaagtggggtttgtgtggacggtagacaagccagagaacaagtagagtgacaccgattagtaggagaaagatggtgaggaatgtggcaa |
49087456 |
T |
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| Q |
209 |
aagcacgtccggaagaacttgtgccgtaggaagaagaaggtggtggaccagcaggtttgttcatttgtagtttgtcaggggggagatggtgttgttggtt |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49087455 |
aagcacgtccggaagaacttgtgccgtaggaagaagaaggtggtggaccagcaggtttgttcatttgtagtttgtcaggggggagatggtgttgttggtt |
49087356 |
T |
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| Q |
309 |
tggaggttgagactgag |
325 |
Q |
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||||||||||||||||| |
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| T |
49087355 |
tggaggttgagactgag |
49087339 |
T |
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