View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19058_low_49 (Length: 313)
Name: NF19058_low_49
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19058_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 9 - 297
Target Start/End: Original strand, 42069455 - 42069743
Alignment:
| Q |
9 |
gaagaaaatgatgtttacaaacacaaagaaaatgttgattaattcaatacttcacaactacaatattgacatgacacatcaatgaaatactataatacaa |
108 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42069455 |
gaagaatatgatgtttacaaacacaaagaaaatgttgattaattcaatacttcacaactacaatattgacatgacacatcaatgaaatactataatacaa |
42069554 |
T |
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| Q |
109 |
actccaggatatgattggaaagaaataaaaagcttacaataagtttgttcagcaagaattgctggatcttcatgccgaaattgcggtttggtgcaagcac |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42069555 |
actccaggatatgattggaaagaaataaaaagcttacaataagtttgttcagcaagaattgctggatcttcatgccgaaattgcggtttggtgcaagcac |
42069654 |
T |
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| Q |
209 |
accccatcaaaaagacttgcttatgtttcccagactttggggatgaattaaccgtatatatatgtgcacttgcgatttgactagaacat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42069655 |
accccatcaaaaagacttgcttatgtttcccagactttggggatgaattaaccgtatatatatgtgcacttgcgatttgactagaacat |
42069743 |
T |
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