View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19058_low_50 (Length: 305)
Name: NF19058_low_50
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19058_low_50 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 42682741 - 42682467
Alignment:
| Q |
13 |
aatatgtagaagctttcaatccatttttcaccacagtttcccatatgggttcacctaaccaccattttggatcatggctacccataaaaaattgatcacc |
112 |
Q |
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| T |
42682741 |
aatatgtagaagctttcaatccatttttcaccacagtttcccatatgggttcacctaaccaccattttggatcatggctacccataaaaaattgatcacc |
42682642 |
T |
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| Q |
113 |
agaaataggatctaaaaaatggttattgattataccatgataagcagggtaaagaccagtagcaatagagtaatgatttggaaaagttaaggatggaaaa |
212 |
Q |
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| T |
42682641 |
agaaataggatctaaaaaatggttattgattataccatgataagcagggtaaagaccagtagcaatagagtaatgatttggaaaagttaaggatggaaaa |
42682542 |
T |
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| Q |
213 |
acaggaatcaaccctgtttcagcttctgttccatttgaaatcaaacgagtaatacttggagtaaaggttttgaat |
287 |
Q |
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| T |
42682541 |
acaggaatcaaccctgtttcagcttctgttccatttgaaatcaaacgagtgatagaaggagtaaaggttttgaat |
42682467 |
T |
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