View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19058_low_51 (Length: 305)
Name: NF19058_low_51
Description: NF19058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19058_low_51 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 264
Target Start/End: Complemental strand, 2539662 - 2539415
Alignment:
| Q |
17 |
gtttaataattagagtaaaggtataaactgaacctcgagaaaacagaatatgaaactatattttggtctctgaaaatttcataaaaactatgcattatgg |
116 |
Q |
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| T |
2539662 |
gtttaacaattagagtaaaggtctaaactaaaccttgataaaacagaatatgaaactatattttggtctctgaaaatttcataaaaactatgcattatgg |
2539563 |
T |
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| Q |
117 |
atcaaaccttgagaggctataatcttaataaaatttcgaacaatttttaatactatgcattatggatccaaatataaaagtgattcaaagtagaataaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
2539562 |
atcaaaccttgagaggctataatcttaataaaatttcgaacaatttttaatactatgcattatggatcaaaatataaaagtgattcaaagtagaataaaa |
2539463 |
T |
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| Q |
217 |
ggcctgtttgttatagctttctttgaaaacgatttttcaaatgtttca |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2539462 |
ggcctgtttgttatagctttctttgaaaacgatttttcaaatgtttca |
2539415 |
T |
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