View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1905_low_14 (Length: 291)
Name: NF1905_low_14
Description: NF1905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1905_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 26368869 - 26368610
Alignment:
| Q |
16 |
ataatatagttttgatgaaggaaattttgtacaaatactatactatctaattattgaaacaaaatttccatttccaattgagtattttcatttatcttca |
115 |
Q |
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| T |
26368869 |
ataatatagttttgatgaaggaaattttgtacaaatactatactatctaattattgaaacaaaatttccatttccaattgagtattttcatttatcttca |
26368770 |
T |
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| Q |
116 |
ctcttgtttctaaattttcggttaaattcatttttcactcaatttagtgccaatgtaatctaatttagatttgtcattaaatcgatctaatttaattcta |
215 |
Q |
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| T |
26368769 |
ctcttgtttctaaattttcggttaaattcatttttcactcaatttagtgtcaatgtaatctaatttagatttttcattaaatcgatctaatttaattcta |
26368670 |
T |
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| Q |
216 |
taaatctgaccccttctttttatcttttgtactccttttagggatagtttgttgcaaattt |
276 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26368669 |
taaatc-gaccccttctttttatcttttgtactccttttagggatagtttgttgcaaattt |
26368610 |
T |
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