View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1905_low_22 (Length: 250)
Name: NF1905_low_22
Description: NF1905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1905_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 7685744 - 7685986
Alignment:
| Q |
1 |
tcatgttttcagtttttgattcaataggtaaaaaacagatagggatgtaaataatatatatttacccttttaatatagaaacaaggggtcaacgacctta |
100 |
Q |
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| T |
7685744 |
tcatgttttcagtttttgattcaataggtaaaaaacagatagggatgtaaatagtatatatttacccttttaatatagaaacaaggggtcaacgacctta |
7685843 |
T |
|
| Q |
101 |
aaaccttgagatgttcattcatctgtcttcttctgttcctctcaacagctatgtgagacatgatcggtttggttcttgatatacaactatggttgaatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7685844 |
aaaccttgagatgttcattcatctgtcttcttctgttcctctcaacagctatgtgagacatgatcggtttggttcttgatatacaactatggttgaatat |
7685943 |
T |
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| Q |
201 |
agttttatattctttctccttttggaagctactagtattatct |
243 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7685944 |
agttttatattctttctccttttggaagctactagttttatct |
7685986 |
T |
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