View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1905_low_6 (Length: 362)

Name: NF1905_low_6
Description: NF1905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1905_low_6
NF1905_low_6
[»] scaffold0193 (2 HSPs)
scaffold0193 (4-288)||(24785-25069)
scaffold0193 (308-362)||(25098-25152)
[»] chr1 (31 HSPs)
chr1 (1-86)||(25130812-25130896)
chr1 (1-75)||(26501404-26501478)
chr1 (1-76)||(6829672-6829747)
chr1 (1-68)||(9011754-9011821)
chr1 (1-76)||(13813667-13813742)
chr1 (1-68)||(29489254-29489321)
chr1 (1-76)||(25995569-25995646)
chr1 (1-75)||(50035426-50035500)
chr1 (1-78)||(27578291-27578368)
chr1 (1-66)||(36669267-36669332)
chr1 (4-68)||(50777318-50777382)
chr1 (1-68)||(42843239-42843306)
chr1 (1-83)||(3291305-3291387)
chr1 (5-77)||(5383872-5383944)
chr1 (1-68)||(50797889-50797956)
chr1 (1-78)||(7371833-7371910)
chr1 (1-76)||(19920871-19920946)
chr1 (1-68)||(49189106-49189173)
chr1 (1-75)||(32966376-32966450)
chr1 (1-67)||(43195985-43196051)
chr1 (4-68)||(46902714-46902779)
chr1 (1-58)||(19651517-19651570)
chr1 (11-75)||(22171403-22171466)
chr1 (7-67)||(45190681-45190741)
chr1 (1-36)||(7203771-7203806)
chr1 (1-76)||(10385523-10385598)
chr1 (4-75)||(27895649-27895720)
chr1 (17-68)||(48871850-48871901)
chr1 (5-68)||(51193028-51193091)
chr1 (1-35)||(36930684-36930718)
chr1 (1-79)||(37669507-37669585)
[»] chr8 (48 HSPs)
chr8 (1-68)||(33817266-33817333)
chr8 (1-75)||(30927819-30927893)
chr8 (1-77)||(19723092-19723168)
chr8 (7-78)||(36593671-36593742)
chr8 (1-76)||(41273624-41273699)
chr8 (1-68)||(34765745-34765812)
chr8 (1-75)||(6656227-6656301)
chr8 (1-75)||(6736629-6736703)
chr8 (4-89)||(11089689-11089773)
chr8 (1-76)||(1065526-1065601)
chr8 (6-76)||(6745929-6746000)
chr8 (1-76)||(14228802-14228877)
chr8 (1-68)||(41293617-41293683)
chr8 (1-75)||(38504279-38504353)
chr8 (1-75)||(39258943-39259017)
chr8 (1-75)||(43602311-43602385)
chr8 (1-62)||(10291145-10291206)
chr8 (4-68)||(36497773-36497837)
chr8 (4-76)||(43587753-43587825)
chr8 (1-68)||(2597055-2597122)
chr8 (1-68)||(10344437-10344504)
chr8 (1-68)||(11139005-11139072)
chr8 (1-68)||(23952602-23952669)
chr8 (1-68)||(37562036-37562103)
chr8 (1-76)||(37568499-37568574)
chr8 (1-75)||(20288642-20288716)
chr8 (1-75)||(21075271-21075345)
chr8 (1-75)||(34972174-34972248)
chr8 (6-67)||(14531735-14531796)
chr8 (1-68)||(5924919-5924986)
chr8 (4-67)||(6825173-6825236)
chr8 (1-60)||(13884425-13884484)
chr8 (1-68)||(30129518-30129585)
chr8 (1-75)||(6105323-6105397)
chr8 (4-76)||(13565405-13565477)
chr8 (4-68)||(35595322-35595386)
chr8 (1-68)||(41519967-41520035)
chr8 (1-68)||(5925164-5925231)
chr8 (1-68)||(7129642-7129708)
chr8 (1-68)||(36064139-36064206)
chr8 (6-68)||(20284821-20284883)
chr8 (6-68)||(21071450-21071512)
chr8 (1-67)||(33301853-33301919)
chr8 (4-78)||(34970317-34970391)
chr8 (4-48)||(22999466-22999510)
chr8 (1-45)||(36178181-36178225)
chr8 (23-67)||(41746909-41746953)
chr8 (1-68)||(43186405-43186470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-78)||(147141-147218)
[»] chr6 (19 HSPs)
chr6 (1-74)||(3339388-3339461)
chr6 (1-68)||(3660248-3660315)
chr6 (1-68)||(27334973-27335040)
chr6 (1-68)||(27395713-27395780)
chr6 (1-76)||(2056892-2056967)
chr6 (1-74)||(17902581-17902654)
chr6 (1-77)||(11017491-11017567)
chr6 (1-80)||(237281-237360)
chr6 (1-68)||(1803978-1804045)
chr6 (1-76)||(34413200-34413275)
chr6 (4-66)||(6435148-6435210)
chr6 (1-75)||(15328598-15328672)
chr6 (1-77)||(2881442-2881518)
chr6 (4-75)||(15364771-15364842)
chr6 (1-76)||(25924751-25924826)
chr6 (1-76)||(32784847-32784922)
chr6 (8-68)||(12441643-12441703)
chr6 (4-68)||(29376611-29376675)
chr6 (1-73)||(2862181-2862253)
[»] chr4 (52 HSPs)
chr4 (1-86)||(9032889-9032974)
chr4 (1-76)||(5208214-5208289)
chr4 (1-75)||(27001297-27001371)
chr4 (1-75)||(31221522-31221596)
chr4 (1-75)||(47106020-47106094)
chr4 (1-78)||(8026649-8026726)
chr4 (1-76)||(44368089-44368164)
chr4 (1-76)||(51377180-51377255)
chr4 (1-75)||(24019859-24019933)
chr4 (2-74)||(52669498-52669570)
chr4 (1-77)||(55267887-55267963)
chr4 (1-76)||(3223098-3223173)
chr4 (1-76)||(7037371-7037446)
chr4 (4-77)||(45548670-45548743)
chr4 (1-68)||(32901438-32901505)
chr4 (1-68)||(37022370-37022437)
chr4 (1-75)||(1796474-1796547)
chr4 (1-75)||(24235429-24235503)
chr4 (5-68)||(15638243-15638306)
chr4 (1-68)||(32079218-32079285)
chr4 (1-68)||(41495122-41495189)
chr4 (1-76)||(51224725-51224800)
chr4 (1-76)||(56025365-56025440)
chr4 (1-75)||(53662330-53662404)
chr4 (4-68)||(46844136-46844200)
chr4 (1-68)||(2193704-2193771)
chr4 (1-68)||(18568710-18568777)
chr4 (1-68)||(20056491-20056558)
chr4 (1-76)||(53384229-53384303)
chr4 (29-78)||(24154747-24154796)
chr4 (1-33)||(4100684-4100716)
chr4 (1-77)||(33483992-33484068)
chr4 (1-77)||(34259935-34260011)
chr4 (4-48)||(40258313-40258357)
chr4 (4-68)||(55642500-55642564)
chr4 (1-36)||(8456012-8456047)
chr4 (1-68)||(15515893-15515960)
chr4 (1-68)||(20632543-20632610)
chr4 (1-68)||(32365562-32365629)
chr4 (1-68)||(41609567-41609634)
chr4 (4-78)||(13182443-13182517)
chr4 (1-74)||(34460629-34460703)
chr4 (38-76)||(45779190-45779228)
chr4 (7-68)||(46282376-46282437)
chr4 (1-66)||(46480403-46480468)
chr4 (3-75)||(12694316-12694388)
chr4 (42-78)||(20956479-20956515)
chr4 (1-45)||(29577354-29577398)
chr4 (1-45)||(31413704-31413748)
chr4 (1-45)||(33777003-33777047)
chr4 (4-48)||(36728537-36728581)
chr4 (1-33)||(45678372-45678404)
[»] chr3 (45 HSPs)
chr3 (1-78)||(13159770-13159847)
chr3 (1-76)||(11327217-11327292)
chr3 (1-76)||(34021350-34021425)
chr3 (1-68)||(36819065-36819132)
chr3 (1-76)||(50279974-50280049)
chr3 (1-75)||(52453980-52454054)
chr3 (1-78)||(32931803-32931880)
chr3 (1-73)||(53102792-53102864)
chr3 (1-76)||(30400043-30400118)
chr3 (4-67)||(35756092-35756155)
chr3 (8-78)||(8254143-8254213)
chr3 (1-75)||(40478175-40478249)
chr3 (4-74)||(44855363-44855433)
chr3 (1-74)||(30633703-30633776)
chr3 (1-77)||(46344523-46344599)
chr3 (1-68)||(20714352-20714419)
chr3 (1-76)||(28263654-28263729)
chr3 (1-68)||(50879704-50879771)
chr3 (1-68)||(54233396-54233463)
chr3 (1-75)||(3957906-3957980)
chr3 (1-75)||(41877797-41877871)
chr3 (1-77)||(3069461-3069537)
chr3 (4-76)||(9582046-9582118)
chr3 (1-74)||(7039123-7039193)
chr3 (1-76)||(23163032-23163107)
chr3 (1-68)||(23906882-23906949)
chr3 (1-76)||(45295626-45295701)
chr3 (1-67)||(2009763-2009828)
chr3 (5-74)||(38944037-38944107)
chr3 (1-75)||(40558889-40558963)
chr3 (4-76)||(43900884-43900956)
chr3 (1-68)||(25542866-25542933)
chr3 (1-68)||(27937073-27937140)
chr3 (1-68)||(41348888-41348955)
chr3 (1-68)||(47056420-47056487)
chr3 (1-78)||(14992184-14992261)
chr3 (4-68)||(51717553-51717617)
chr3 (1-76)||(38957403-38957478)
chr3 (1-68)||(50652497-50652564)
chr3 (1-68)||(53932286-53932353)
chr3 (1-74)||(42718230-42718301)
chr3 (1-46)||(26021976-26022021)
chr3 (4-68)||(31206762-31206826)
chr3 (1-45)||(35987350-35987394)
chr3 (1-77)||(47683899-47683975)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-77)||(1382-1458)
[»] chr5 (45 HSPs)
chr5 (1-76)||(11464010-11464085)
chr5 (1-76)||(30574264-30574339)
chr5 (1-75)||(3263396-3263470)
chr5 (1-75)||(15622153-15622227)
chr5 (1-76)||(12512902-12512977)
chr5 (1-76)||(19271968-19272043)
chr5 (1-68)||(22920387-22920454)
chr5 (1-68)||(33823589-33823656)
chr5 (1-76)||(38010981-38011056)
chr5 (76-220)||(33749034-33749176)
chr5 (1-65)||(12401301-12401365)
chr5 (4-76)||(30776731-30776803)
chr5 (1-76)||(9594587-9594662)
chr5 (1-75)||(7077227-7077301)
chr5 (1-75)||(9596702-9596776)
chr5 (1-75)||(25345447-25345521)
chr5 (96-205)||(33867075-33867182)
chr5 (1-68)||(8959269-8959336)
chr5 (4-76)||(12417738-12417810)
chr5 (1-68)||(8726281-8726348)
chr5 (1-76)||(15917913-15917988)
chr5 (1-68)||(17489457-17489524)
chr5 (1-75)||(4954575-4954649)
chr5 (1-75)||(10522884-10522958)
chr5 (1-47)||(28501726-28501772)
chr5 (4-78)||(32634820-32634894)
chr5 (6-76)||(36548267-36548337)
chr5 (7-68)||(3154538-3154599)
chr5 (1-68)||(372615-372682)
chr5 (1-76)||(1760470-1760545)
chr5 (1-79)||(4292892-4292970)
chr5 (29-75)||(28501766-28501812)
chr5 (1-77)||(26685382-26685458)
chr5 (1-77)||(26955112-26955188)
chr5 (101-220)||(33904621-33904738)
chr5 (1-35)||(7144684-7144718)
chr5 (1-67)||(22203816-22203882)
chr5 (42-76)||(32379823-32379857)
chr5 (109-178)||(33698764-33698831)
chr5 (6-76)||(35972685-35972754)
chr5 (1-53)||(11432734-11432786)
chr5 (1-73)||(16143606-16143678)
chr5 (11-75)||(26685810-26685874)
chr5 (11-75)||(26955541-26955605)
chr5 (1-45)||(35924379-35924423)
[»] chr2 (39 HSPs)
chr2 (1-68)||(37966465-37966532)
chr2 (1-75)||(23047971-23048045)
chr2 (1-77)||(38246637-38246713)
chr2 (1-76)||(3195974-3196049)
chr2 (1-75)||(44484544-44484618)
chr2 (1-76)||(6885019-6885094)
chr2 (1-76)||(27307132-27307207)
chr2 (1-75)||(30413620-30413694)
chr2 (1-75)||(34144440-34144514)
chr2 (1-63)||(36383571-36383633)
chr2 (1-78)||(4097053-4097130)
chr2 (4-77)||(33029988-33030061)
chr2 (1-76)||(36582365-36582440)
chr2 (1-81)||(10550341-10550421)
chr2 (4-68)||(29871250-29871314)
chr2 (1-68)||(5962747-5962814)
chr2 (1-68)||(12358422-12358489)
chr2 (1-74)||(12175217-12175290)
chr2 (3-68)||(22353070-22353135)
chr2 (1-68)||(23391171-23391238)
chr2 (1-68)||(36909739-36909805)
chr2 (1-68)||(38572048-38572115)
chr2 (1-76)||(43936348-43936422)
chr2 (1-67)||(18949115-18949180)
chr2 (7-68)||(17826162-17826223)
chr2 (1-75)||(30487336-30487414)
chr2 (1-78)||(38021465-38021541)
chr2 (1-77)||(4432436-4432511)
chr2 (1-77)||(36763406-36763482)
chr2 (4-75)||(3298993-3299064)
chr2 (1-68)||(10688050-10688117)
chr2 (1-68)||(12192056-12192123)
chr2 (6-77)||(33003937-33004008)
chr2 (1-68)||(42141505-42141572)
chr2 (1-67)||(9694957-9695023)
chr2 (1-75)||(29893719-29893793)
chr2 (1-75)||(33857326-33857400)
chr2 (1-68)||(42678655-42678720)
chr2 (4-68)||(45372574-45372638)
[»] chr7 (42 HSPs)
chr7 (1-75)||(27164725-27164799)
chr7 (1-75)||(33050292-33050366)
chr7 (1-68)||(42431832-42431899)
chr7 (1-75)||(116740-116814)
chr7 (1-75)||(26041419-26041493)
chr7 (1-75)||(30864305-30864379)
chr7 (4-68)||(25614716-25614780)
chr7 (1-77)||(29162165-29162241)
chr7 (1-76)||(38978601-38978675)
chr7 (1-76)||(44511248-44511323)
chr7 (5-68)||(47530186-47530249)
chr7 (1-68)||(48057392-48057459)
chr7 (1-75)||(2346947-2347021)
chr7 (1-77)||(29609763-29609839)
chr7 (4-75)||(30402081-30402150)
chr7 (1-68)||(10014850-10014917)
chr7 (1-76)||(30201368-30201443)
chr7 (1-68)||(42060766-42060833)
chr7 (1-68)||(42476463-42476530)
chr7 (1-76)||(44175654-44175729)
chr7 (107-220)||(5470132-5470243)
chr7 (6-68)||(8742497-8742559)
chr7 (1-75)||(17157242-17157316)
chr7 (19-76)||(35004130-35004187)
chr7 (4-53)||(37325729-37325778)
chr7 (1-49)||(3040507-3040555)
chr7 (7-75)||(5901001-5901069)
chr7 (1-76)||(19880118-19880194)
chr7 (4-68)||(37149370-37149434)
chr7 (1-68)||(1838354-1838421)
chr7 (1-68)||(8326234-8326301)
chr7 (1-68)||(32315935-32316002)
chr7 (4-75)||(33881593-33881664)
chr7 (1-68)||(37385128-37385195)
chr7 (1-78)||(20406650-20406727)
chr7 (11-74)||(3344981-3345044)
chr7 (4-75)||(39369414-39369485)
chr7 (1-68)||(43255462-43255529)
chr7 (1-35)||(38990210-38990244)
chr7 (6-68)||(42942274-42942336)
chr7 (1-42)||(37172899-37172940)
chr7 (1-34)||(45335972-45336005)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-76)||(249029-249104)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-75)||(31188-31262)
[»] scaffold0121 (1 HSPs)
scaffold0121 (6-68)||(29897-29959)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-77)||(3470-3546)
[»] scaffold0247 (1 HSPs)
scaffold0247 (78-220)||(21848-21988)
[»] scaffold0522 (1 HSPs)
scaffold0522 (1-75)||(2392-2466)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-82)||(88917-88998)
[»] scaffold0576 (1 HSPs)
scaffold0576 (4-75)||(9542-9613)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-75)||(17084-17158)
[»] scaffold0023 (1 HSPs)
scaffold0023 (83-220)||(90050-90185)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-74)||(35382-35455)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-75)||(18704-18777)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-68)||(72066-72130)
[»] scaffold0027 (1 HSPs)
scaffold0027 (4-68)||(5191-5255)


Alignment Details
Target: scaffold0193 (Bit Score: 265; Significance: 1e-148; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 24785 - 25069
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaaatatttggtaaacgtacttga 103  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24785 accaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctctatcaaaatatttggtaaacgtacttga 24884  T
Q  104 catgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagagagaccttttctcaaaatgaagttgat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24885 catgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacggagagaccttttctcaaaatgaagttgat 24984  T
Q  204 ataatccaaaggttacatgtcctacaaataaagtaaaattaaaattgtacgtgtatgccagcttctgatcttgtgatgcaatcag 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24985 ataatccaaaggttacatgtcctacaaataaagtaaaattaaaattgtatgtgtatgccagcttctgatcttgtgatgcaatcag 25069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 25098 - 25152
Alignment:
Q  308 aaaatgatgcattcagtctatagttagaataattatattcatatattagctatat 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25098 aaaatgatgcattcagtctatagttagaataattatattcatatattagctatat 25152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25130812 - 25130896
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaaatat 86  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  25130812 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaatatcactgctct-tcaaaatat 25130896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26501404 - 26501478
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||    
T  26501404 ttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatagatgtacaaatatcattgctc 26501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6829747 - 6829672
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  6829747 ttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 6829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9011754 - 9011821
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  9011754 ttgaccaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatggatgtacaaatatc 9011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13813667 - 13813742
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||| |||||||    
T  13813667 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 13813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29489321 - 29489254
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  29489321 ttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatatatgtacaaatatc 29489254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25995569 - 25995646
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaa--atagatgtacaaatatcgttgctct 76  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||||||||||| |||||||    
T  25995569 ttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatatagatgtacaaatatcattgctct 25995646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50035500 - 50035426
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| || ||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  50035500 ttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatagatgtacaaatatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27578291 - 27578368
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||| |||  ||||||||||||| |||||||||    
T  27578291 ttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatgaatgtacaaatatcattgctctat 27578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36669332 - 36669267
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaata 66  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||    
T  36669332 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatttacaaata 36669267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 50777382 - 50777318
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || | ||||||||||||||    
T  50777382 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatatc 50777318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42843306 - 42843239
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||| || | ||||||||||||||    
T  42843306 ttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatc 42843239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3291387 - 3291305
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaaa 83  Q
    |||||||| || |||||||| |||||||||| ||| ||||||||||||| ||| |||||||||||||| || |||| ||||||    
T  3291387 ttgaccaaaaagaagagagagaaacaaggttatcattaaaattgtcatggaatggatgtacaaatatcattactctttcaaaa 3291305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 5383872 - 5383944
Alignment:
Q  5 ccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||| ||||||||||||||||| |||||||| ||| |||| || |||| |||||||||||||| ||||||||    
T  5383872 ccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatggatgtacaaatatcattgctcta 5383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50797889 - 50797956
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||| ||||||||| ||||||| ||| || |||| || ||||||||||||||||    
T  50797889 ttgaccaataaaaagagataaaaacaagtttgtcaccaaagttatcatcaattagatgtacaaatatc 50797956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7371910 - 7371833
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| ||||||||||||||| ||| ||| |||| |||||||| ||| |||||||| ||||| | |||||||    
T  7371910 ttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatggaatggatgtacatatatcatcgctctat 7371833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19920871 - 19920946
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||| |||||||| ||| ||||| | |||| |||||  ||||||| |||||||    
T  19920871 ttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctct 19920946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 49189173 - 49189106
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||| ||||||||| |||||||  ||||||| ||| ||||||| |||| ||||||||||||||    
T  49189173 ttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatc 49189106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32966376 - 32966450
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||||||||||||||||  |||||||||| ||| |||| |  |||||| ||| |||||||| ||||||    
T  32966376 ttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatcattgctc 32966450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43196051 - 43195985
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||||||| ||||||||||| | ||| ||| |||| ||| ||||||| ||||||||||||||||||    
T  43196051 ttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaatagatgtacaaatat 43195985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 46902714 - 46902779
Alignment:
Q  4 accaataaaaagagag-aaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||| || | ||||||||||||||    
T  46902714 accaataagaagagaggaaaaaaaaagttgtcactaaaattgtcatcaattggatgtacaaatatc 46902779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19651517 - 19651570
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatg 58  Q
    ||||||||||||||||||||||||    |||||||||||||||||||| |||| ||||    
T  19651517 ttgaccaataaaaagagagaaaaa----gttgtcactaaaattgtcataaaatggatg 19651570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22171466 - 22171403
Alignment:
Q  11 aaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||  ||||||||||||| ||||||    
T  22171466 aaaagaga-aaaaacaaggttgtcattaaaattatcatggaatgaatgtacaaatatcattgctc 22171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 45190681 - 45190741
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||| |||||||||||| |||||||| || ||||||||||| |||||| |||| ||||||    
T  45190681 aataagaagagagaaaaagaaggttgttacaaaaattgtcattaaatagttgtataaatat 45190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 7203806 - 7203771
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcac 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  7203806 ttgaccaatagaaagagagaaaaacaaggttgtcac 7203771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10385523 - 10385598
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| |||| |||||||| |||  ||||||| ||| || |||| |||| |||||||||||||| |||||||    
T  10385523 ttgaccaatcaaaaaagagaaaagcaaaattgtcaccaaagttatcattaaatggatgtacaaatatcattgctct 10385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 27895720 - 27895649
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||||| ||||||||||||||| |||||||||||| ||||| | ||||  ||||  ||||||| ||||||    
T  27895720 accaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcattgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 48871901 - 48871850
Alignment:
Q  17 gagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||  ||| ||||| ||||||||||||||| |||||    
T  48871901 gagaaaaacaaggttgtcatgaaagttgtcttgaaatagatgtacatatatc 48871850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 51193091 - 51193028
Alignment:
Q  5 ccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||| ||||||||||||||| |||||||  ||| ||||||| |||| |||||||| |||||    
T  51193091 ccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatatc 51193028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36930718 - 36930684
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  36930718 ttgaccaataaaaagagagaaaaagaaggttgtca 36930684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37669507 - 37669585
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatc 79  Q
    ||||||||| |||| |||| | ||||| ||||||||  ||||| |||| ||||  ||||||||||||| ||||||||||    
T  37669507 ttgaccaatcaaaaaagaggagaacaaagttgtcaccgaaattatcattaaatgaatgtacaaatatcattgctctatc 37669585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33817266 - 33817333
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33817266 ttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatc 33817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30927893 - 30927819
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  30927893 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19723168 - 19723092
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  19723168 ttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatagatgtacaaatatcattgctcta 19723092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 36593742 - 36593671
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  36593742 aataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctat 36593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41273624 - 41273699
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||| ||| |||||||||||||| |||||||    
T  41273624 ttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctct 41273699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34765812 - 34765745
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| || ||||||||||||||||    
T  34765812 ttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgtcatcaattagatgtacaaatatc 34765745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6656301 - 6656227
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| | ||||||    
T  6656301 ttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctc 6656227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6736703 - 6736629
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| | ||||||    
T  6736703 ttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctc 6736629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 11089689 - 11089773
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaaatatttg 89  Q
    |||||| |||| |||||||||||| |||||||| ||||||||||| |||| |||||||||||||| ||||||| | ||||||||||    
T  11089689 accaatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct-ttaaaatatttg 11089773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1065526 - 1065601
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||| || |||| |||||||||||||| |||||||| |||||||| ||| |||||||||||||| |||||||    
T  1065526 ttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatggatgtacaaatatcattgctct 1065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 6746000 - 6745929
Alignment:
Q  6 caataaaaagagagaaaaac-aaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  6746000 caataagaagagagaaaaactaaggttgtcactaaaattgtcatggaatggatgtacaaataccattgctct 6745929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14228802 - 14228877
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||| |||||||| ||||| |||||||    
T  14228802 ttgaccaataaaaaaagagaaaaataaaattgtcactaaaattatcatgaaatggatgtacatatatcattgctct 14228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41293683 - 41293617
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||    
T  41293683 ttgaccaataagaagagagaaaaacaag-ttgtcactaaagttgtcatggaatggatgtacaaatatc 41293617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38504279 - 38504353
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||||||||||||||||  ||||||| |||||||| || |||| |||||||||||||| ||||||    
T  38504279 ttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39259017 - 39258943
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| ||||| |||||||||||||||| || ||| ||||||||||||| ||| |||||||||||||| ||||||    
T  39259017 ttgactaataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaatatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43602385 - 43602311
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||||||||| |||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  43602385 ttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10291206 - 10291145
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtaca 62  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||||||||||||    
T  10291206 ttgatcaataaaaagggagaaaaacatgattgtcactaaagttgtcatgaaatagatgtaca 10291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36497773 - 36497837
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||||| |  ||| ||||||| || ||||||||||||||||    
T  36497773 accaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaatatc 36497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43587753 - 43587825
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||| ||||||||||||||||| |||||||| ||| ||||||| |||| ||| |||||||||| |||||||    
T  43587753 accaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatcattgctct 43587825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2597122 - 2597055
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||| || |  |||||||||||||    
T  2597122 ttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatatc 2597055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10344437 - 10344504
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||| ||||||||||||||||||  ||| |||| || ||||||||||||| |||||    
T  10344437 ttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatc 10344504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11139005 - 11139072
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||| |||||||||| |||||||| ||| ||||||| || | ||||||||||||||    
T  11139005 ttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatatc 11139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23952602 - 23952669
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||| ||||||||||||  || |||||||| ||||||| ||||||| |||||||||||    
T  23952602 ttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgtcataaaatagacgtacaaatatc 23952669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37562103 - 37562036
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||||||| || | ||||||||||||||    
T  37562103 ttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatc 37562036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37568574 - 37568499
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| || | |||||||||| |||||||||||| || | ||||||| |||||||||||||| |||||||    
T  37568574 ttgaccaataagaaaaaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctct 37568499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20288642 - 20288716
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||| |||||| |||||||||||| | || ||| ||| |||||||||||||| ||||||    
T  20288642 ttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaatatcattgctc 20288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21075271 - 21075345
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||| |||||| |||||||||||| | || ||| ||| |||||||||||||| ||||||    
T  21075271 ttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaatatcattgctc 21075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34972174 - 34972248
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||| |||| ||||||||||||  ||||||| ||| ||||||| ||||||||||||||||||| ||||||    
T  34972174 ttgatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgtcattaaatagatgtacaaatatcattgctc 34972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 14531735 - 14531796
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    |||||| |||||||||||| |||||||||| |||  ||||||||| ||||||||||||||||    
T  14531735 caataagaagagagaaaaataaggttgtcattaatgttgtcatgagatagatgtacaaatat 14531796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5924919 - 5924986
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||| ||||||||||  ||| ||||||| |||| |||||||| |||||    
T  5924919 ttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatatc 5924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 6825236 - 6825173
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    |||||||| |||||||||||| ||||||| ||| ||| ||||||  ||||||||||||||||||    
T  6825236 accaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatat 6825173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13884425 - 13884484
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgta 60  Q
    |||| |||||| |||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13884425 ttgatcaataagaagagagaaaaacaaaattgtcactaaagttgtcatgtaatagatgta 13884484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30129518 - 30129585
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||| ||| |||||||| ||| ||||||| || | ||||||||||||||    
T  30129518 ttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatatc 30129585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6105397 - 6105323
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||| |||| || |||||||||||| ||||| | |||| ||||||||| |||| ||||||    
T  6105397 ttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaatggatgtacaagtatcattgctc 6105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 13565477 - 13565405
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||| || | |||||| ||||||||||| |||| |||| || |||| |||||||||||||| |||||||    
T  13565477 accaataagaataaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatcattgctct 13565405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 35595322 - 35595386
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| ||||||||||| |||||||||||| ||| || |||| | | |||||||||||||||    
T  35595322 accaataagaagagagaaaagcaaggttgtcaccaaacttatcattagacagatgtacaaatatc 35595386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41519967 - 41520035
Alignment:
Q  1 ttgaccaataaaaagagag-aaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||||||||| |||||||||||| |||| |||||| || | || || |||||||||||||    
T  41519967 ttgaccaataaaaagagaggaaaaacaaggttatcaccaaaattatcgtcaattaaatgtacaaatatc 41520035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5925164 - 5925231
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| || ||||||||| ||||||||||  ||| ||||||| |||| |||||||| |||||    
T  5925164 ttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatatc 5925231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7129642 - 7129708
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||||||| |||||||  ||| |||| |||||||  |||||||||||||    
T  7129642 ttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatgaatgtacaaatatc 7129708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36064139 - 36064206
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||| |||| |||| ||||||| ||| || |||| || | ||||||||||||||    
T  36064139 ttgaccaataaaaagagataaaagcaagtttgtcaccaaagttatcatcaattggatgtacaaatatc 36064206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 20284821 - 20284883
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||| |||||||||||| ||||||||||| ||| ||||||| |||| | ||| ||||||||    
T  20284821 caataagaagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatc 20284883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 21071450 - 21071512
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||| |||||||||||| ||||||||||| ||| ||||||| |||| | ||| ||||||||    
T  21071450 caataagaagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatc 21071512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33301919 - 33301853
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||||||||| |||||| | ||||| ||||| ||||||| |||||||| |||  ||||||||||||    
T  33301919 ttgaccaataagaagagatagaaacatggttgccactaaagttgtcatggaatgaatgtacaaatat 33301853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 34970317 - 34970391
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||||||| ||||||||||||||| ||||| |||||| ||||| | ||||  ||||  ||||||| |||||||||    
T  34970317 accaataagaagagagaaaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctctat 34970391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 22999510 - 22999466
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcat 48  Q
    ||||||| ||||||||||||| ||||||||||| ||| |||||||    
T  22999510 accaatacaaagagagaaaaagaaggttgtcacaaaagttgtcat 22999466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36178225 - 36178181
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||    
T  36178225 ttgaccaataagaagagagaaaaacaagattatcactaaagttgt 36178181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 41746909 - 41746953
Alignment:
Q  23 aacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||||||||||| |||| |||||||| ||| |||||||||||||    
T  41746909 aacaaggttgtcattaaagttgtcatggaatggatgtacaaatat 41746953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43186405 - 43186470
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||| ||||||| | ||  |||||||||||||||| ||| |||  |||||||||||||    
T  43186405 ttgaccaataaaaatagagaaacaaaa--ttgtcactaaaattgttatggaatgaatgtacaaatatc 43186470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 147218 - 147141
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  147218 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctat 147141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3339461 - 3339388
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||    
T  3339461 ttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3660315 - 3660248
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  3660315 ttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatc 3660248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27334973 - 27335040
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  27334973 ttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatc 27335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27395713 - 27395780
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  27395713 ttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatc 27395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2056892 - 2056967
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||| |||  ||||||||||||| |||||||    
T  2056892 ttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatgaatgtacaaatatcattgctct 2056967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17902654 - 17902581
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||||| |||||||||||||||  || |||||||| |||||||| |||||||||||||||||| |||||    
T  17902654 ttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatggaatagatgtacaaatatcattgct 17902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11017491 - 11017567
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||| ||| ||| ||||||||||||||  |||||||    
T  11017491 ttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcactgctcta 11017567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 237360 - 237281
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatca 80  Q
    ||||||||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||| |||||||| |||||| ||||    
T  237360 ttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaatagatgtccaaatatcattgctcaatca 237281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1803978 - 1804045
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  1803978 ttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 1804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34413200 - 34413275
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| |||||||| |||| ||| |||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  34413200 ttgaccaatcaaaagagaaaaaatcaaagttgtcaccaaaattgtcattaaattgatgtacaaatatcattgctct 34413275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6435148 - 6435210
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaata 66  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || | ||||||||||||    
T  6435148 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaata 6435210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15328598 - 15328672
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||| ||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  15328598 ttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 15328672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2881442 - 2881518
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||| |||||| |||||||| ||| ||||||| |||| ||||| |||||||| ||||||||    
T  2881442 ttgaccaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctcta 2881518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 15364771 - 15364842
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||| ||||||||| ||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  15364771 accaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 15364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25924826 - 25924751
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| ||||||||| ||||||| |||||||| ||| ||||||| ||||  ||||||||||||| |||||||    
T  25924826 ttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatgaatgtacaaatatcattgctct 25924751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32784847 - 32784922
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| ||| |||||||||||||||||  ||||||| ||||||||||| ||||| ||||| ||||||| |||||||    
T  32784847 ttgactaatcaaaagagagaaaaacaaaattgtcaccaaaattgtcattaaataaatgtagaaatatcattgctct 32784922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 12441643 - 12441703
Alignment:
Q  8 ataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| ||||||||||| |||||||||||| ||| ||||||| || ||||||||||||||||    
T  12441643 ataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaatatc 12441703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29376675 - 29376611
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| ||||||| |||||| ||||||||  ||||||||||  |||||||||||||||||||    
T  29376675 accaataagaagagagcaaaacatggttgtcatcaaaattgtcactaaatagatgtacaaatatc 29376611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2862181 - 2862253
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgc 73  Q
    ||||||||||| || ||||| ||||||  ||||||| ||| ||||||| |||| ||||| |||||||| ||||    
T  2862181 ttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9032889 - 9032974
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaaatat 86  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||| || |||||||    
T  9032889 ttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctcgatgaaaatat 9032974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5208289 - 5208214
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  5208289 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 5208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27001371 - 27001297
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  27001371 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31221522 - 31221596
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||    
T  31221522 ttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaatatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47106020 - 47106094
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  47106020 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8026726 - 8026649
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  8026726 ttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctat 8026649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44368164 - 44368089
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| ||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  44368164 ttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 44368089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51377255 - 51377180
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| | ||| |||||||||||||| |||||||    
T  51377255 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatcattgctct 51377180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24019933 - 24019859
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||    
T  24019933 ttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgtacaaatatcattgctc 24019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 52669570 - 52669498
Alignment:
Q  2 tgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||| |||| |||||||||||||| |||||    
T  52669570 tgaccaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatggatgtacaaatatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 55267963 - 55267887
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||| ||||||||    
T  55267963 ttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatggaataggtgtacaaatatcattgctcta 55267887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3223098 - 3223173
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||| ||||||||||||||| || ||||| ||| |||||||||||||| |||||||    
T  3223098 ttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcattgctct 3223173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7037446 - 7037371
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||  |||||||    
T  7037446 ttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaatataattgctct 7037371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 45548743 - 45548670
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||||| | ||||||||||||||||| ||||||||    
T  45548743 accaataaaaatagaaaaaaacaaggtcgtcactaaagttgtcattagatagatgtacaaatatcattgctcta 45548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32901438 - 32901505
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||| || | ||||||||||||||    
T  32901438 ttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatc 32901505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37022370 - 37022437
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||| | ||||||||||| || |||||||| |||||||||||| ||||||||||||||    
T  37022370 ttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatggatgtacaaatatc 37022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1796474 - 1796547
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||||| ||| |||||||||||||| ||||||    
T  1796474 ttgaccaataagaagagagaaaaacaaagt-gtcactaaagttgtcatggaatggatgtacaaatatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24235429 - 24235503
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||  ||  ||||||||||| |||||||||||| |||||||||||||| ||||||    
T  24235429 ttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 15638243 - 15638306
Alignment:
Q  5 ccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  15638243 ccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 15638306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32079218 - 32079285
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| |||||| || ||||||||||||||||||||||||| |||| |||||||  |||||||||||||    
T  32079218 ttgatcaataagaaaagagaaaaacaaggttgtcactaaagttgttatgaaatgtatgtacaaatatc 32079285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41495122 - 41495189
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| |||| || ||||| ||||||||||    
T  41495122 ttgaccaataagaagagagaaaaacaaagttgtcaccaaaattatcatcaattagatatacaaatatc 41495189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51224800 - 51224725
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| ||||||||| |||||||  ||||||| ||| ||||||| |||| |||||||||||||| |||||||    
T  51224800 ttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatcattgctct 51224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 56025365 - 56025440
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| ||||||||||||| ||| |||||||| ||| ||||||| ||||  ||||||||||||| |||||||    
T  56025365 ttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaatgaatgtacaaatatcattgctct 56025440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 53662404 - 53662330
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| ||||| |||||||||||||||  || |||||||| |||||||||||| |||||||| ||||| ||||||    
T  53662404 ttgactaataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 46844200 - 46844136
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||| |||||||| ||| ||||| | ||||||||||  |||||||    
T  46844200 accaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgtcaaaatatc 46844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2193771 - 2193704
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||| ||||||  ||| ||||||| || | ||||||||||||||    
T  2193771 ttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatatc 2193704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18568777 - 18568710
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||| |||||| |||||||||||| ||| ||||||| || | ||||||||||||||    
T  18568777 ttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 18568710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20056491 - 20056558
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||| |||| ||||||| ||| ||||||| || | ||||||||||||||    
T  20056491 ttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatatc 20056558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53384303 - 53384229
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||  ||||||||||| || |||| |||| |||||||||||||  |||||||    
T  53384303 ttgaccaataagaagagagaaaaacaaa-ttgtcactaaagttatcataaaatggatgtacaaatattattgctct 53384229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 24154747 - 24154796
Alignment:
Q  29 gttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||||||  |||||| |||| |||||||||||||||||||||||||||||    
T  24154747 gttgtcatcaaaattatcattaaatagatgtacaaatatcgttgctctat 24154796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4100716 - 4100684
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgt 33  Q
    |||||||||||||||||||||||||||||||||    
T  4100716 ttgaccaataaaaagagagaaaaacaaggttgt 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33484068 - 33483992
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    |||| |||||| |||||||||||  ||||||||||| ||| ||||||| || | |||||||||||||| || |||||    
T  33484068 ttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactcta 33483992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34259935 - 34260011
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||||||| ||| ||||||| ||| ||||||  |||| | |||||||||||| || |||||    
T  34259935 ttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactcta 34260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 40258313 - 40258357
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcat 48  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||    
T  40258313 accaataaaaagagagaaaaacaagattgtcaccaaagttgtcat 40258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 55642564 - 55642500
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||||| |||| |||||||||||| ||| || |||| || | ||||||||||||||    
T  55642564 accaataaaaagagataaaagcaaggttgtcaccaaagttatcattaattggatgtacaaatatc 55642500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 8456012 - 8456047
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  8456012 ttgaccaataaaaagagagaaaaagaaggttgtcac 8456047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15515893 - 15515960
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||||| |||||||||||||||||||  ||| ||||  | |||||||||| || |||||    
T  15515893 ttgaccaataaaaagtgagaaaaacaaggttgtcatcaaagttgttttcaaatagatgttcatatatc 15515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20632610 - 20632543
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||  |||||| ||||| || |||||||| ||||||||||| || | ||||||||||||||    
T  20632610 ttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatatc 20632543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32365629 - 32365562
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||| || ||| |||  ||| || |||| ||||||||||||| |||||    
T  32365629 ttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatatc 32365562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41609634 - 41609567
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||| ||||||||||||||  || ||||||| ||||||||||| |||| | ||| ||||||||    
T  41609634 ttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatc 41609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 13182443 - 13182517
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| ||||||||||||| || |||  ||| ||||||| || | |||||||||||||| || ||||||    
T  13182443 accaataaaaaaagagaaaaacaagattatcatcaaagttgtcatcaatttgatgtacaaatatcattactctat 13182517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34460703 - 34460629
Alignment:
Q  1 ttgaccaataaaaagagaga-aaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    |||| ||||||||||||||  |||| || ||||||| ||||||||| || |||||||||||| |||||| |||||    
T  34460703 ttgatcaataaaaagagagggaaaataaagttgtcattaaaattgttattaaatagatgtacgaatatcattgct 34460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 45779228 - 45779190
Alignment:
Q  38 aaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  45779228 aaaattgtcattaaatagatgtacaaatatcattgctct 45779190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 46282376 - 46282437
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||| || |||||||| |||||| |||| ||||   ||||||||||||    
T  46282376 aataaaaagagagaaaaataaagttgtcacaaaaattatcatcaaatgagtgtacaaatatc 46282437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46480468 - 46480403
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaata 66  Q
    |||||||||||||| ||||||||| ||  |||||| |||| |||||||  |||||||||| |||||    
T  46480468 ttgaccaataaaaaaagagaaaaataaaattgtcattaaagttgtcatagaatagatgtagaaata 46480403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 12694388 - 12694316
Alignment:
Q  3 gaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||| |||||||||| ||| | || |||| ||||||||||| | |||||| |||||||||| ||||||    
T  12694388 gaccgataagaagagagaaacacatgattatcaccaaaattgtcattagatagatatacaaatatcattgctc 12694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 20956515 - 20956479
Alignment:
Q  42 ttgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  20956515 ttgtcattaaatagatgtacaaatatcattgctctat 20956479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29577398 - 29577354
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    ||||||||| ||||||||||| |||||||||||| | ||||||||    
T  29577398 ttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgt 29577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31413748 - 31413704
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    ||||||||||||||||||| | |||||||||||||| ||| ||||    
T  31413748 ttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgt 31413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33777003 - 33777047
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||    
T  33777003 ttgaccaataaaaagagagaacaacaaggttatcccaaaaattgt 33777047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 36728581 - 36728537
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcat 48  Q
    |||||||| ||||||||||||||| |||||||| ||| |||||||    
T  36728581 accaataagaagagagaaaaacaaagttgtcaccaaagttgtcat 36728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45678372 - 45678404
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  45678372 ttgaccaataaaaagagagaacaacaaggttgt 45678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13159770 - 13159847
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  13159770 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctat 13159847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11327217 - 11327292
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  11327217 ttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 11327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34021425 - 34021350
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  34021425 ttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 34021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36819065 - 36819132
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  36819065 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatc 36819132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50280049 - 50279974
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| |||||||    
T  50280049 ttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctct 50279974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 52454054 - 52453980
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||| |||||||||||||| ||||||    
T  52454054 ttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32931880 - 32931803
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  |||||| |||||||||||||| ||| |||||    
T  32931880 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattgttctat 32931803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53102864 - 53102792
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgc 73  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||    
T  53102864 ttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgc 53102792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30400118 - 30400043
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||  |||||||    
T  30400118 ttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatataattgctct 30400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 35756092 - 35756155
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    |||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  35756092 accaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaatat 35756155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 8254143 - 8254213
Alignment:
Q  8 ataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||| |||||||| ||| || ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  8254143 ataagaagagagagaaataatgttgtcactaaaattgtcatgaaatggatgtacaaatatcattgctctat 8254213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40478249 - 40478175
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||| |||||||||||||| ||||||    
T  40478249 ttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 40478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 44855363 - 44855433
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    |||||||| |||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||| |||||    
T  44855363 accaataagaagagagaaaaataagattgtcactaaagttgtcatgaaattgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30633776 - 30633703
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||||| |||||||||||| |||||||||| |||| || |||| ||||||||||||||||||| |||||    
T  30633776 ttgaccaataagaagagagaaaaataaggttgtcattaaagttatcataaaatagatgtacaaatatcattgct 30633703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 46344523 - 46344599
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||    
T  46344523 ttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctcta 46344599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20714352 - 20714419
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||| ||||||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  20714352 ttgaccaataagaagatagaaaaataaggttgtcactaaaattatcatggaatggatgtacaaatatc 20714419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28263654 - 28263729
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||| ||||||| || |||||||||||| |||||||||||| |||| ||||||||| |||||||    
T  28263654 ttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatggatgaacaaatatcattgctct 28263729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50879704 - 50879771
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||| ||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  50879704 ttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatc 50879771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54233463 - 54233396
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  54233463 ttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 54233396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3957980 - 3957906
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||| || ||| |||||||||||||| ||||||    
T  3957980 ttgacaaataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatggatgtacaaatatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41877797 - 41877871
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||| |||||||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  41877797 ttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3069537 - 3069461
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||||||||||| ||  ||||||| |||||||| ||| ||||| |||||||| ||||||||    
T  3069537 ttgaccaataagaagagagaaaaacaagattcccactaaagttgtcatggaatggatgtgcaaatatcattgctcta 3069461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 9582118 - 9582046
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||| ||||| |||||| ||||||||||  ||||||||||||||||| ||||||| ||||| |||||||    
T  9582118 accaataagaagagtgaaaaataaggttgtcatcaaaattgtcatgaaatatatgtacacatatcattgctct 9582046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7039193 - 7039123
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||||| |||||||||   ||||||| ||||||||||||||||||||| || ||||||||||| |||||    
T  7039193 ttgaccaataagaagagagaa---caaggttatcactaaaattgtcatgaaatggaagtacaaatatcattgct 7039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23163107 - 23163032
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| || ||||||||||||  |||||||||||||||||||| ||| |||||  ||||||| |||||||    
T  23163107 ttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatggaattgatgtctaaatatcattgctct 23163032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23906949 - 23906882
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||| |||||||||||| ||| ||||||| || | ||||||||||||||    
T  23906949 ttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 23906882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45295701 - 45295626
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| ||||||||| ||||||| |||||||| |||  |||||| |||| |||||||||||||| |||||||    
T  45295701 ttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagctgtcattaaatggatgtacaaatatcattgctct 45295626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2009763 - 2009828
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||||||||| ||||||||||| |||||||||||| ||| ||||||| |||| |||||||||||||    
T  2009763 ttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcat-aaattgatgtacaaatat 2009828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 38944107 - 38944037
Alignment:
Q  5 ccaataaaaagagagaaaaacaaggttgtcactaaaattgtcat-gaaatagatgtacaaatatcgttgct 74  Q
    ||||||| ||| |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  38944107 ccaataagaagggagaaaaataagattgtcactaaagttgtcatggaaatagatgtacaaatatcattgct 38944037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40558963 - 40558889
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||| ||| |||  ||||||||||||| ||||||    
T  40558963 ttgatcaataagaagagagaaaaataaggttgtcactaaagttgttatggaatgaatgtacaaatatcattgctc 40558889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43900884 - 43900956
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||| ||||||||||||||| |||||||||||| ||||| | |||| |||||  ||||||| |||||||    
T  43900884 accaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctct 43900956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25542933 - 25542866
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||| ||||||||| ||| ||| |||||||||||| || |||| |||| ||||||||||||||    
T  25542933 ttgaccaatcaaaagagaggaaaccaaagttgtcactaaagttatcattaaatggatgtacaaatatc 25542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27937073 - 27937140
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||| | |||| |||||||||||  ||| ||||||| || ||||||||||||||||    
T  27937073 ttgaccaataaaaagataaaaaagcaaggttgtcatcaaagttgtcatcaattagatgtacaaatatc 27937140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41348955 - 41348888
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| ||||||||| ||||||||| ||||||||||| |||||||| || || ||||||| ||||||||    
T  41348955 ttgatcaataaaaaaagagaaaaataaggttgtcaccaaaattgtgatcaattagatgtgcaaatatc 41348888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47056487 - 47056420
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||| ||||||||||||  ||||||||||  ||||||||||| || | ||||||||||||||    
T  47056487 ttgaccaatagaaagagagaaaagtaaggttgtcatcaaaattgtcatcaactggatgtacaaatatc 47056420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14992184 - 14992261
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||| |||| |||  ||||||| |||||||| ||| ||||||| |||| |||||||||||||| || ||||||    
T  14992184 ttgaccaatcaaaaaagaataaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcatttctctat 14992261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 51717553 - 51717617
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| || ||||||||||| |||||||||||| ||| ||||||| || | ||||||||||||||    
T  51717553 accaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 51717617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38957478 - 38957403
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||||||||||| ||||| | | || || ||||| || |||| |||||||| |||||||||| |||||||    
T  38957478 ttgaccaataaaaagagaaaaaaatatgattatcgctaaagttatcattaaatagatatacaaatatcattgctct 38957403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50652497 - 50652564
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||| |||  ||||||  ||||||||||| || || |||||||||||||    
T  50652497 ttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtcatcaattaaatgtacaaatatc 50652564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 53932353 - 53932286
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| ||||| |||| |||||| |||||||||||| ||| ||||||| || | ||||||||||||||    
T  53932353 ttgactaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 53932286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42718230 - 42718301
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||| ||||||||||||  ||| |||||||| ||||||||||| ||||  ||||||| ||||| |||||    
T  42718230 ttgaccaatcaaaagagagaaa--caaagttgtcaccaaaattgtcattaaatgaatgtacatatatcattgct 42718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26022021 - 26021976
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtc 46  Q
    ||||||||||||||||| |||||| ||||||||||| ||| |||||    
T  26022021 ttgaccaataaaaagagtgaaaaagaaggttgtcacaaaagttgtc 26021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 31206826 - 31206762
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||| |||||||| |  ||| ||||||| |||| |||||||| |||||    
T  31206826 accaataaaaaaagagaaaaataaggttgtaatcaaagttgtcataaaattgatgtacatatatc 31206762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35987350 - 35987394
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||    
T  35987350 ttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgt 35987394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47683899 - 47683975
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||||| | ||||||||| | ||| ||||||  |||| | |||||||||||| || |||||    
T  47683899 ttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactcta 47683975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1458 - 1382
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  1458 ttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctcta 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11464085 - 11464010
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||| |||||||    
T  11464085 ttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 11464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30574339 - 30574264
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  30574339 ttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctct 30574264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3263470 - 3263396
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  3263470 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15622153 - 15622227
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  15622153 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12512902 - 12512977
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  12512902 ttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 12512977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19271968 - 19272043
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||| |||||||    
T  19271968 ttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcatataatagatgtacaaatatcattgctct 19272043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22920454 - 22920387
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  22920454 ttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatagatgtacaaatatc 22920387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33823656 - 33823589
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  33823656 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatc 33823589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38010981 - 38011056
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||| ||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||    
T  38010981 ttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatagatgtacaaatatcattgctct 38011056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 33749176 - 33749034
Alignment:
Q  76 tatcaaaatatttggtaaacgtacttgacatgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacag 175  Q
    ||||||||||||||| |||| |||||| || || ||||||||||  || ||| ||||||| |||| ||  |||||||||||||||||| |||||||||||    
T  33749176 tatcaaaatatttggcaaacatacttggcaggactgaataggtgcagaaaaagttgtagattgagatg--gttaaattatttaaacccaaccatcaacag 33749079  T
Q  176 agagaccttttctcaaaatgaagttgatataatccaaaggttaca 220  Q
    ||| | ||||||| |  |||||| |||||| ||||  ||||||||    
T  33749078 agaaatcttttctgaggatgaagctgatatgatccttaggttaca 33749034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12401301 - 12401365
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaat 65  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  12401301 ttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaat 12401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 30776731 - 30776803
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  30776731 accaataaaaagagagagaaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatcattgctct 30776803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9594587 - 9594662
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||| ||| ||||||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  9594587 ttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 9594662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7077301 - 7077227
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||||||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  7077301 ttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9596776 - 9596702
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| |||  ||||||||||||| ||||||    
T  9596776 ttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatcattgctc 9596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25345447 - 25345521
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||| ||| ||| |||||||||||||| ||||||    
T  25345447 ttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatggatgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 33867182 - 33867075
Alignment:
Q  96 gtacttgacatgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagagagaccttttctcaaaatg 195  Q
    ||||||| || ||||||||||||| ||  ||| ||||||| |||||||  ||||||||||||||||||||||||||| |||||||  |||||| |  |||    
T  33867182 gtacttggcaggattgaataggtgccggaaaagttgtagattgaggtg--gttaaattatttaaaccccaccatcaatagagagagtttttctgaggatg 33867085  T
Q  196 aagttgatat 205  Q
    ||||||||||    
T  33867084 aagttgatat 33867075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8959269 - 8959336
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||| || | ||||||||||||||    
T  8959269 ttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatc 8959336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12417738 - 12417810
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| || |||||||||| |||| |||||||| ||| ||||| ||||||||||||||||||||| |||||||    
T  12417738 accaaaaagaagagagaaacacaaagttgtcaccaaagttgtcgtgaaatagatgtacaaatatcattgctct 12417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8726348 - 8726281
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||| |||||||||||| ||||| |||||| ||| ||||||| || ||||||||||||||||    
T  8726348 ttgaccaatagaaagagagaaaagcaaggctgtcaccaaagttgtcatcaattagatgtacaaatatc 8726281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15917988 - 15917913
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||| ||| || |||||| ||||| |||||||| ||| |||||||||||||| |||||||    
T  15917988 ttgaccaataagaagagagagaaataaagttgtcgctaaagttgtcatggaatggatgtacaaatatcattgctct 15917913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17489457 - 17489524
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||| ||||||| ||| ||||||| || | ||||||||||||||    
T  17489457 ttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatc 17489524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4954575 - 4954649
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||| |||| |||||||||||||||||||||||||||| |||| ||  ||| |||||| ||||||| ||||||    
T  4954575 ttgacccataagaagagagaaaaacaaggttgtcactaaagttgttatagaatggatgtagaaatatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10522884 - 10522958
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| || | ||| |||  || |||||||||| ||||||    
T  10522884 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttattatggaatgaatatacaaatatcattgctc 10522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28501726 - 28501772
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtca 47  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  28501726 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtca 28501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 32634820 - 32634894
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||||||| || ||||||||||||  || ||||||||||||||||| ||| |||||||||||||| ||| |||||    
T  32634820 accaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatggatgtacaaatatcattgatctat 32634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 36548337 - 36548267
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| ||||||||||||||||||||  ||| ||||||| | || |||||||||||||| |||||||    
T  36548337 caataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatggatgtacaaatatcattgctct 36548267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 3154599 - 3154538
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||| || |||||||| ||||||||||| || || |||||||||||||    
T  3154599 aataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaatatc 3154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 372682 - 372615
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| |||||||||| |||||| |||||||||||| |||||| |||| || | ||||||||||||||    
T  372682 ttgactaataaaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatatc 372615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1760470 - 1760545
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||| || ||||| ||||||| ||||||  ||||| || |||||||||| |||||||    
T  1760470 ttgaccaataagaagagagaaaagcatggttgacactaaagttgtcaataaatacatatacaaatatcattgctct 1760545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4292892 - 4292970
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatc 79  Q
    ||||||||||| || |||||||||||| |||||||  ||||||||||| ||||  |||| |||||||| || |||||||    
T  4292892 ttgaccaataagaatagagaaaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactctatc 4292970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 28501766 - 28501812
Alignment:
Q  29 gttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  28501766 gttgtcactaaaattgtcatgaaattgatgtataaatatcattgctc 28501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26685458 - 26685382
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||| | || ||||| |||||||||| || |||||    
T  26685458 ttgaccaataaaaagagaaaaaagtatggttgtcaccaaaattgtcttcaattagatatacaaatatcattactcta 26685382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26955188 - 26955112
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||| | || ||||| |||||||||| || |||||    
T  26955188 ttgaccaataaaaagagaaaaaagtatggttgtcaccaaaattgtcttcaattagatatacaaatatcattactcta 26955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 33904738 - 33904621
Alignment:
Q  101 tgacatgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagagagaccttttctcaaaatgaagtt 200  Q
    ||||| ||||||||||||| ||| |||  |||||| |||||||  |||||||||||||| ||||| |||||| || || | |||| || |  ||||||||    
T  33904738 tgacaggattgaataggtgccgaaaaagctgtagattgaggtg--gttaaattatttaacccccaacatcaaaagggaaagctttgctgaggatgaagtt 33904641  T
Q  201 gatataatccaaaggttaca 220  Q
    ||||| || | |||||||||    
T  33904640 gatatgatgctaaggttaca 33904621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7144684 - 7144718
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7144684 ttgaccaataaaaagagagaaaaagaaggttgtca 7144718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22203816 - 22203882
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||  ||| |||| | |||||||||||    
T  22203816 ttgaccaataagaagagagaaaaggaaggttgtcacaaaaattaccatcaaatggttgtacaaatat 22203882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 32379857 - 32379823
Alignment:
Q  42 ttgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||||||||||||||||||| |||||||    
T  32379857 ttgtcatgaaatagatgtacaaatatcattgctct 32379823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 33698831 - 33698764
Alignment:
Q  109 ttgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagaga 178  Q
    ||||||||||||||  ||| ||||||| |||||||  ||| ||||||||||||||| | |||||||||||    
T  33698831 ttgaataggtgtcggaaaagttgtagattgaggtg--gttgaattatttaaaccccgcaatcaacagaga 33698764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 35972685 - 35972754
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||||||||||  ||||||||||| |||||| |||  |||| |||||||||||||  |||||||    
T  35972685 caataaaaagagagaaaat-aaggttgtcaccaaaattatcaataaattgatgtacaaatatgattgctct 35972754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11432734 - 11432786
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaat 53  Q
    ||||||||||| ||||||||| |||||||||||| |  || ||||||||||||    
T  11432734 ttgaccaataacaagagagaacaacaaggttgtcccagaagttgtcatgaaat 11432786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16143606 - 16143678
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgc 73  Q
    ||||||||||| | |||||||| ||| | ||||||  ||| ||||||| ||||||||||||| ||||| ||||    
T  16143606 ttgaccaataagatgagagaaacacatgattgtcatcaaagttgtcattaaatagatgtacatatatcattgc 16143678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26685810 - 26685874
Alignment:
Q  11 aaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||||||  |||| || ||| || |||| ||||||||||||||||||| ||||||    
T  26685810 aaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaaatatcattgctc 26685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26955541 - 26955605
Alignment:
Q  11 aaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| |||||||  |||| || ||| || |||| ||||||||||||||||||| ||||||    
T  26955541 aaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaaatatcattgctc 26955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35924379 - 35924423
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgt 45  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||    
T  35924379 ttgacaaataaaaagagagaacaacaaggttgtctcaaaaattgt 35924423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37966465 - 37966532
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37966465 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatc 37966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23048045 - 23047971
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  23048045 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38246713 - 38246637
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||    
T  38246713 ttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattgatgtacaaatatcattgctcta 38246637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3196049 - 3195974
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||| ||| |||||||||||||| |||||||    
T  3196049 ttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctct 3195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44484618 - 44484544
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||| ||||||    
T  44484618 ttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6885019 - 6885094
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||    
T  6885019 ttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatgaatgtacaaatatcattgctct 6885094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27307207 - 27307132
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||| ||| |||||| ||||||| |||||||    
T  27307207 ttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatcattgctct 27307132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30413694 - 30413620
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||||| ||||||    
T  30413694 ttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 30413620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34144514 - 34144440
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||| || ||||||||||| ||||||    
T  34144514 ttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaattgaggtacaaatatcattgctc 34144440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36383571 - 36383633
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaa 63  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  36383571 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgaaattgatgtacaa 36383633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4097053 - 4097130
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| || |||| |||| ||||||||| |||||||||    
T  4097053 ttgaccaataatcagagagaaaaacaaggttgtcaccaaaattgttattaaatggatggacaaatatcattgctctat 4097130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 33030061 - 33029988
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| ||||||||||||||||||||  ||| ||||||| | ||||||||||||||||| ||||||||    
T  33030061 accaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtacaaatatcattgctcta 33029988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36582365 - 36582440
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||| | || ||||||||||||||||||||| ||| ||||||| |||| |||||||||||||| |||||||    
T  36582365 ttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctct 36582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10550421 - 10550341
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaa 81  Q
    |||||||||||||| |||||||||||| |||||||  ||| ||||||| |||| ||||| |||||||| || |||||||||    
T  10550421 ttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactctatcaa 10550341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29871314 - 29871250
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||||    
T  29871314 accaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaatagatggacaaatatc 29871250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5962747 - 5962814
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||||||| ||| |||| |||||| |||| || ||||||||||||||||    
T  5962747 ttgaccaataagaagagagaaaaacaaagttatcaccaaaattatcatcaattagatgtacaaatatc 5962814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12358422 - 12358489
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||| |||||| |||||||||||| ||| ||||||| || | ||||||||||||||    
T  12358422 ttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 12358489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12175290 - 12175217
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||| ||||||||| ||||||| |||||||| ||| || |||| ||||| ||||||||||||| |||||    
T  12175290 ttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataaatgtacaaatatcattgct 12175217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 22353135 - 22353070
Alignment:
Q  3 gaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||| |||||||||| |||||||| |||| |||||| |||| |||| ||||||||||||||    
T  22353135 gaccaataagaagagagaaatacaaggttatcaccaaaattatcattaaatggatgtacaaatatc 22353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23391171 - 23391238
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| |||||| ||||||||||||||| |||||| ||||| || ||||| ||| ||||||||||||||    
T  23391171 ttgatcaataagaagagagaaaaacaaagttgtcgctaaagttatcatggaatggatgtacaaatatc 23391238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36909805 - 36909739
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||||||| |||||||  ||| |||| ||||||| ||||||||||||||    
T  36909805 ttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatatc 36909739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38572048 - 38572115
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||| || || |  |||||||||||||    
T  38572048 ttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgttatcaattgaatgtacaaatatc 38572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43936422 - 43936348
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||||||| ||||||||||||  || |||| |||||||| || |||| |||||||||||||| |||||||    
T  43936422 ttgaccaataaaaaaagagaaaaacaaaattatcaccaaaattgtgattaaat-gatgtacaaatatcattgctct 43936348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18949115 - 18949180
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    |||||||||||||||| ||||||| ||| ||||||| ||| |||| ||||||||| |||||||||||    
T  18949115 ttgaccaataaaaagaaagaaaaagaag-ttgtcacaaaagttgttatgaaatagttgtacaaatat 18949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 17826162 - 17826223
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| |||||||||||||||||||||||  ||| ||||| | ||||||||||||| |||||    
T  17826162 aataagaagagagaaaaacaaggttgtcatgaaagttgtcttaaaatagatgtacatatatc 17826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30487414 - 30487336
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttg----tcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||||||||    | | ||||||||||||  ||| |||||||||||||| ||||||    
T  30487414 ttgaccaataagaagagagaaaaacaaggttgccattaattaaaattgtcatagaatggatgtacaaatatcattgctc 30487336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38021465 - 38021541
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    ||||||||| |||||||||| ||||||  ||||||| ||| || |||| |||| |||||||||||||| |||||||||    
T  38021465 ttgaccaatcaaaagagagagaaacaaaattgtcaccaaagttatcattaaat-gatgtacaaatatcattgctctat 38021541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4432436 - 4432511
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| ||||||||||||||| |||| |||| || ||||||| |||| |||||  ||||||| ||||||||    
T  4432436 ttgaccaataagaagagagaaaaacaaagttgacactgaagttgtcattaaat-gatgtcaaaatatcattgctcta 4432511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36763482 - 36763406
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||| |||||||||||||| ||||||||||  |||||||| |  |||| | ||| |||||||| ||||||||    
T  36763482 ttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctcta 36763406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 3299064 - 3298993
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||||| |||||||| ||| ||| ||||||| |||||| |||| ||||||||||| || |||| ||||||    
T  3299064 accaataagaagagagagaaataagattgtcaccaaaattatcattaaatagatgtataattatcattgctc 3298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10688050 - 10688117
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| ||| |||||||| |||||    
T  10688050 ttgactaataagaagagagaaaaacaaggttttcattaaagttgccatggaatggatgtacacatatc 10688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12192056 - 12192123
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||| |||||||| |||||||||||| ||| || | || || | ||||||||||||||    
T  12192056 ttgaccaataaaaatagagaaaagcaaggttgtcaccaaagttattatcaattggatgtacaaatatc 12192123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 33003937 - 33004008
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||| |||| |||| |||||| |||| ||| ||||||| |||  |||||||||||||| ||||||||    
T  33003937 caataaaaacagaggaaaaaaaggttatcaccaaagttgtcattaaaaggatgtacaaatatcattgctcta 33004008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42141572 - 42141505
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| |||||| || ||||||||||||||||||||  ||| || |||| |||||||||| ||||||||    
T  42141572 ttgatcaataagaatagagaaaaacaaggttgtcaacaaagttatcatcaaatagatgtccaaatatc 42141505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9695023 - 9694957
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatat 67  Q
    |||||| ||||||| |||||||| |||||||||||| ||| ||||||| || | ||| |||||||||    
T  9695023 ttgaccgataaaaatagagaaaagcaaggttgtcaccaaagttgtcatcaattggatttacaaatat 9694957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29893719 - 29893793
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||| |||||| |||||||||||||||  ||||||||||| || ||||  ||| ||| |||||||||| ||||||    
T  29893719 ttgatcaataagaagagagaaaaacaaaattgtcactaaacttatcatagaatggatatacaaatatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33857326 - 33857400
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||| ||||||| || |||||||| ||| ||||| | ||||||||||  ||||||| ||||||    
T  33857326 ttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42678655 - 42678720
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||  |||||||||| ||   ||| |||||||||||| |||||||| |||||    
T  42678655 ttgaccaataaaaagagag--aaacaaggttctcgtcaaagttgtcatgaaatggatgtacatatatc 42678720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 45372574 - 45372638
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||||| | ||||||||| | ||||| ||| ||||||| ||||  |||||||||||||    
T  45372574 accaataaaaagatataaaaacaagatcgtcaccaaagttgtcattaaatgaatgtacaaatatc 45372638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27164799 - 27164725
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  27164799 ttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33050292 - 33050366
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  33050292 ttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42431832 - 42431899
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  42431832 ttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatc 42431899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 116740 - 116814
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||    
T  116740 ttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26041419 - 26041493
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||| ||||||    
T  26041419 ttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30864379 - 30864305
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| || ||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  30864379 ttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 25614780 - 25614716
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  25614780 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatatc 25614716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29162241 - 29162165
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||||||||| ||||||||    
T  29162241 ttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatcattgctcta 29162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38978601 - 38978675
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||    
T  38978601 ttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaatatcattgctct 38978675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44511248 - 44511323
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| || ||||||||||||  ||||||||||| ||||||| |||| |||||||||||||| |||||||    
T  44511248 ttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatggatgtacaaatatcattgctct 44511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 47530249 - 47530186
Alignment:
Q  5 ccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||| |||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  47530249 ccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatatc 47530186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48057459 - 48057392
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| |||||||||||||||  |||||||||||  |||||| |||||||||||||||||||    
T  48057459 ttgaccaataagaagagagaaaaacaaaattgtcactaaagatgtcatcaaatagatgtacaaatatc 48057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2347021 - 2346947
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| |||| ||||||| ||||||||||||||| ||||||| ||||  ||||||||||||| ||||||    
T  2347021 ttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaatatcattgctc 2346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29609839 - 29609763
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||| ||| ||||||||| ||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||||    
T  29609839 ttgacaaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaattgatgtacaaatatcattgctcta 29609763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 30402150 - 30402081
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||||| |||||  ||| |||||||| |||||| |||||||||||||||||||||||| ||||||    
T  30402150 accaataaaaagaaagaaa--caaagttgtcaccaaaattatcatgaaatagatgtacaaatatcattgctc 30402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10014917 - 10014850
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||  ||||||| ||| ||||||| || | ||||||||||||||    
T  10014917 ttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatc 10014850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30201368 - 30201443
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||||||||||||||||| ||| |||||| |||| |||||||  |||  ||||||||||||| |||||||    
T  30201368 ttgaccaataaaaagagagaaaaataagattgtcattaaagttgtcatagaatgtatgtacaaatatcattgctct 30201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42060766 - 42060833
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||| ||||||||||||  ||| |||||||| ||| ||||||| |||||||||||||||||||    
T  42060766 ttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaatagatgtacaaatatc 42060833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42476530 - 42476463
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||| ||||||||||||||| | ||| ||||||| || | ||||||||||||||    
T  42476530 ttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatc 42476463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44175654 - 44175729
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    ||||||||||| |||| ||||||| ||| ||||||||||| ||||| || |||||||||| ||||||| |||||||    
T  44175654 ttgaccaataagaagaaagaaaaagaagattgtcactaaagttgtcgtggaatagatgtataaatatcattgctct 44175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 5470132 - 5470243
Alignment:
Q  107 gattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagagagaccttttctcaaaatgaagttgatata 206  Q
    |||||||||| |||||| ||| ||||||| |||||||  | ||||||||||||| |||| |||||| ||| | | ||||||| |  |||||||||||||     
T  5470132 gattgaatagatgtcgaaaaagttgtagattgaggtg--gataaattatttaaagcccaacatcaatagaaaaagcttttctgaggatgaagttgatatg 5470229  T
Q  207 atccaaaggttaca 220  Q
    |||| |||||||||    
T  5470230 atcctaaggttaca 5470243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 8742497 - 8742559
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||| |||||||||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  8742497 caataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 8742559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17157242 - 17157316
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| ||||||||||||| ||| ||| |||| ||| ||||||| |||| |||||||||||||| ||||||    
T  17157242 ttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaattgatgtacaaatatcattgctc 17157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35004187 - 35004130
Alignment:
Q  19 gaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||||||||| ||||||||||| ||||||| |||| |||||||||||||| |||||||    
T  35004187 gaaaaacaagattgtcactaaagttgtcataaaatggatgtacaaatatcattgctct 35004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 37325778 - 37325729
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaat 53  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  37325778 accaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaat 37325729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3040507 - 3040555
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatg 49  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  3040507 ttgaccaataaaaagggagaaaaacaagattgtcactaaagttgtcatg 3040555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 5901001 - 5901069
Alignment:
Q  7 aataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| || ||||||||| ||| || |||||||| |||||||||||| |||||||||||||| ||||||    
T  5901001 aataacaaaagagaaaaataagattatcactaaagttgtcatgaaattgatgtacaaatatcattgctc 5901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19880194 - 19880118
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatg-aaatagatgtacaaatatcgttgctct 76  Q
    |||||| |||| |||||||||||| ||| ||||||||||| |||||||| |||| |||||||||||||  |||||||    
T  19880194 ttgacccataagaagagagaaaaataagattgtcactaaagttgtcatgcaaatggatgtacaaatattattgctct 19880118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 37149434 - 37149370
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| |||| ||||||||||||||||||  ||| ||||| ||||||||||||||| |||||    
T  37149434 accaataagaagaaagaaaaacaaggttgtcataaaagttgtcttgaaatagatgtacatatatc 37149370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1838421 - 1838354
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| |||||| |||||| ||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  1838421 ttgatcaataagaagagaaaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 1838354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8326234 - 8326301
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||| |||||| |||||||||||| | | ||||||||||| |||| ||||||| ||||||||||||||    
T  8326234 ttgatcaataagaagagagaaaaatacgattgtcactaaagttgttatgaaatggatgtacaaatatc 8326301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32315935 - 32316002
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| ||||||||||||||| |||||||| ||| ||||| | |||||| ||| ||||||||    
T  32315935 ttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatc 32316002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 33881664 - 33881593
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||| ||||||||| ||||||| |||||||| |||||| |||| ||||  ||||||||||||| ||||||    
T  33881664 accaatcaaaagagaggaaaacaaagttgtcaccaaaattatcattaaatgaatgtacaaatatcattgctc 33881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37385195 - 37385128
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||||||||| || |||||| |||||||||||||| ||| ||||||| || | ||||||||||||||    
T  37385195 ttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatc 37385128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20406650 - 20406727
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctat 78  Q
    |||||||||||||||||| |||||||| |||||| |  || |||| || |||| ||||| |||||||| |||||||||    
T  20406650 ttgaccaataaaaagagaaaaaaacaaagttgtcgccgaagttgttattaaatggatgtccaaatatcattgctctat 20406727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 3344981 - 3345044
Alignment:
Q  11 aaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    |||||||| |||||||||||||||   ||||||||||| ||||  ||||||||||||| |||||    
T  3344981 aaaagagataaaaacaaggttgtcttcaaaattgtcattaaatgaatgtacaaatatcattgct 3345044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 39369414 - 39369485
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||||| || |||||||||||| |||||||||||| ||||| | |||| |||||  ||||||| ||||||    
T  39369414 accaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43255529 - 43255462
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    ||||| ||||| |||||||||||  ||| ||||||| |||||| |||| || ||||||||||||||||    
T  43255529 ttgactaataagaagagagaaaagtaagattgtcaccaaaattatcatcaattagatgtacaaatatc 43255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38990210 - 38990244
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtca 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  38990210 ttgaccaataaaaatagagaaaaacaaggttgtca 38990244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 42942336 - 42942274
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||| || ||||||||||||||||||||| |||||| |||| || ||||| || |||||||    
T  42942336 caataagaatagagaaaaacaaggttgtcaccaaaattatcatcaattagatatataaatatc 42942274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37172940 - 37172899
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaat 42  Q
    |||| ||||||||||||||||||||||  |||||||||||||    
T  37172940 ttgatcaataaaaagagagaaaaacaaaattgtcactaaaat 37172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 45335972 - 45336005
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtc 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  45335972 ttgaccaataaaaagagagaacaacaaggttgtc 45336005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 249104 - 249029
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctct 76  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||    
T  249104 ttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 249029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31262 - 31188
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||| || |||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  31262 ttgaccaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatagatgtacaaatatcattgctc 31188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 29897 - 29959
Alignment:
Q  6 caataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  29897 caataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgtacaaatatc 29959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3470 - 3546
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctcta 77  Q
    ||||||||||| |||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||||||| ||||||||    
T  3470 ttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctcta 3546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 21848 - 21988
Alignment:
Q  78 tcaaaatatttggtaaacgtacttgacatgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagag 177  Q
    |||||||||||| || | |||||||||| |||||||||| |||||| ||| ||||||| ||||  |||| ||||||||||||| |||  ||||||||| |    
T  21848 tcaaaatatttgttacatgtacttgacaggattgaatagatgtcgaaaaagttgtagattgag--gtgggtaaattatttaaatccctacatcaacaggg 21945  T
Q  178 agaccttttctcaaaatgaagttgatataatccaaaggttaca 220  Q
    |||  |||||| |  ||||||||||| | || | |||||||||    
T  21946 agaatttttctaaggatgaagttgatttgattctaaggttaca 21988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2466 - 2392
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||||||||||||||||| |||| ||||||| |||||| |||| || | |||||||||||||| ||||||    
T  2466 ttgaccaataaaaagagagaaaatcaagattgtcaccaaaattatcatcaattggatgtacaaatatcattgctc 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 88917 - 88998
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctctatcaaa 82  Q
    ||||||||||| || ||| ||||| ||||||||||||||| || |||||| || |||||||||||||| ||||||| |||||    
T  88917 ttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatcattgctctttcaaa 88998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 9542 - 9613
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    |||||| ||||||||| ||||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  9542 accaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 9613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17084 - 17158
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||||||| | |||||||| |||||| |||||||| ||| ||||||| |||| |||||||||||||| ||||||    
T  17084 ttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 90050 - 90185
Alignment:
Q  83 atatttggtaaacgtacttgacatgattgaataggtgtcgataaaattgtagactgaggtgtggttaaattatttaaaccccaccatcaacagagagacc 182  Q
    ||||||| || | ||| |||||| |||| |||||||||||| ||| ||||||| | |||||  ||| || ||||||||||| |||||||||| ||| |      
T  90050 atatttgttatatgtatttgacaggattaaataggtgtcgaaaaagttgtagattaaggtg--gtttaactatttaaacccaaccatcaacaaagaaaga 90147  T
Q  183 ttttctcaaaatgaagttgatataatccaaaggttaca 220  Q
    |||||| |  ||||||||||||| |||| |||||||||    
T  90148 ttttctgaggatgaagttgatatgatcctaaggttaca 90185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35455 - 35382
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgct 74  Q
    ||||||||| ||||||||| |||||||  || || | ||||||||||| ||||||||||||||||||| |||||    
T  35455 ttgaccaatcaaaagagaggaaaacaaaattttctccaaaattgtcattaaatagatgtacaaatatcattgct 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18704 - 18777
Alignment:
Q  1 ttgaccaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatcgttgctc 75  Q
    ||||| ||||| || ||||||||| |||||| |||||||| ||||| || ||| |||||||||||||| ||||||    
T  18704 ttgactaataagaatagagaaaaataaggttatcactaaagttgtc-tggaatggatgtacaaatatcattgctc 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 72130 - 72066
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||| ||  ||||||| |||||||||||| ||| ||||||  | |||||||||||||||||    
T  72130 accaataagaattgagaaaaccaaggttgtcaccaaagttgtcaccatatagatgtacaaatatc 72066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 5191 - 5255
Alignment:
Q  4 accaataaaaagagagaaaaacaaggttgtcactaaaattgtcatgaaatagatgtacaaatatc 68  Q
    |||||||||||| || |||| ||| |||||||| ||||||||||  | |||||| ||||||||||    
T  5191 accaataaaaagtgaaaaaatcaaagttgtcaccaaaattgtcactatatagatatacaaatatc 5255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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