View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19060_high_4 (Length: 581)

Name: NF19060_high_4
Description: NF19060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19060_high_4
NF19060_high_4
[»] chr7 (11 HSPs)
chr7 (164-581)||(11251241-11251658)
chr7 (164-500)||(11253826-11254162)
chr7 (164-500)||(11256331-11256667)
chr7 (164-500)||(11258837-11259173)
chr7 (164-581)||(11294262-11294685)
chr7 (15-143)||(11251655-11251783)
chr7 (15-143)||(11254159-11254287)
chr7 (15-143)||(11256664-11256792)
chr7 (15-143)||(11259170-11259298)
chr7 (31-143)||(11294682-11294794)
chr7 (29-119)||(10650937-10651028)
[»] chr4 (1 HSPs)
chr4 (44-342)||(9438371-9438660)
[»] chr5 (5 HSPs)
chr5 (237-335)||(28752662-28752757)
chr5 (285-375)||(36320015-36320105)
chr5 (285-329)||(36326442-36326486)
chr5 (42-106)||(16999568-16999633)
chr5 (455-553)||(19935064-19935164)
[»] chr6 (1 HSPs)
chr6 (50-106)||(11762765-11762822)
[»] chr3 (2 HSPs)
chr3 (42-106)||(36015400-36015465)
chr3 (230-266)||(36870337-36870373)
[»] scaffold0063 (1 HSPs)
scaffold0063 (283-324)||(65118-65159)


Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 164 - 581
Target Start/End: Complemental strand, 11251658 - 11251241
Alignment:
Q  164 gagttatgtttcttttaaannnnnnnatattgtttgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctgaa 263  Q
    |||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11251658 gagttatgtttcttttaaatttttttatattgtatgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaaccgctgaa 11251559  T
Q  264 atgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 363  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251558 ttgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 11251459  T
Q  364 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 463  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251458 ggatttccctgcgaataataatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 11251359  T
Q  464 tactgacctaatatttcctgcagattttttctcttttcttacggatcctaaaatcctaggaaacaattagcctcaaggtattatctgggagtgcttattc 563  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11251358 tactgaccgaatatttcctgcagattttttctcttttcttacggatcctgaaatcctaggaaacaattagcctcaaggtattacctgggagtgcttattc 11251259  T
Q  564 ttggcaaaatccgtagga 581  Q
    ||||||||||||||||||    
T  11251258 ttggcaaaatccgtagga 11251241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 164 - 500
Target Start/End: Complemental strand, 11254162 - 11253826
Alignment:
Q  164 gagttatgtttcttttaaannnnnnnatattgtttgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctgaa 263  Q
    |||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11254162 gagttatgtttcttttaaatttttttatattgtatgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaaccgctgaa 11254063  T
Q  264 atgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 363  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11254062 ttgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 11253963  T
Q  364 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11253962 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 11253863  T
Q  464 tactgacctaatatttcctgcagattttttctctttt 500  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11253862 tactgaccgaatatttcctgcagattttttctctttt 11253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 164 - 500
Target Start/End: Complemental strand, 11256667 - 11256331
Alignment:
Q  164 gagttatgtttcttttaaannnnnnnatattgtttgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctgaa 263  Q
    |||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11256667 gagttatgtttcttttaaatttttttatattgtatgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaaccgctgaa 11256568  T
Q  264 atgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 363  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11256567 ttgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 11256468  T
Q  364 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11256467 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 11256368  T
Q  464 tactgacctaatatttcctgcagattttttctctttt 500  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11256367 tactgaccgaatatttcctgcagattttttctctttt 11256331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 164 - 500
Target Start/End: Complemental strand, 11259173 - 11258837
Alignment:
Q  164 gagttatgtttcttttaaannnnnnnatattgtttgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctgaa 263  Q
    |||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11259173 gagttatgtttcttttaaatttttttatattgtatgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaaccgctgaa 11259074  T
Q  264 atgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 363  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11259073 ttgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgc 11258974  T
Q  364 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11258973 ggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcctcaaa 11258874  T
Q  464 tactgacctaatatttcctgcagattttttctctttt 500  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11258873 tactgaccgaatatttcctgcagattttttctctttt 11258837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 164 - 581
Target Start/End: Complemental strand, 11294685 - 11294262
Alignment:
Q  164 gagttatgtttcttttaaannnnnnnatatt-gtttgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctga 262  Q
    |||||||||||||||||||       ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11294685 gagttatgtttcttttaaatttttttatatttgtatgatcatgatgatgcaattgttcaacactttctgttcttcacatctaatttgttctaatcgctaa 11294586  T
Q  263 aatgtttat----aactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgactt 358  Q
    |||||||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||    
T  11294585 aatgtttatttataactagtatcttcttctgtaatctatatttttatcgttttggaatgcattgaaaagcaatattacttttgaatatattagtcgattt 11294486  T
Q  359 cctgcggatttccctgcgaataattatcatatgcataacctttcctgcggaatcacctccgaatatttcgaagaaaaggtgctagcaggcaaaaatctcc 458  Q
    ||||||||||| || ||||||||||||| | | | |||||||| |||||||||||||| ||||||||||| ||| |||||  ||||||||||||||||||    
T  11294485 cctgcggatttaccagcgaataattatcctttacgtaacctttgctgcggaatcacctgcgaatatttcgcagagaaggttgtagcaggcaaaaatctcc 11294386  T
Q  459 tcaaatactgacctaatatttcctgcagattttttctcttttcttacggatcctaaaatccta-ggaaacaattagcctcaaggtattatctgggagtgc 557  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||| |||||||| |    
T  11294385 tcaaatactgaccgaatatttcctgcagattgtttctcttttcttgcggatcctaagatcctagggaaacaattaccctcaaggtattacctgggagtac 11294286  T
Q  558 ttattcttggcaaaatccgtagga 581  Q
    ||||||||||| ||||||||||||    
T  11294285 ttattcttggcgaaatccgtagga 11294262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11251783 - 11251655
Alignment:
Q  15 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgcattgaattgtaagccactaaggtggtgttagtgtaatagacttg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11251783 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgctttgaattgtaagccactaaggtggtgttagtgtcatagacttg 11251684  T
Q  115 gagaggtgtgagaatttaggcaattgagt 143  Q
    |||||||||||||||||||||||||||||    
T  11251683 gagaggtgtgagaatttaggcaattgagt 11251655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11254287 - 11254159
Alignment:
Q  15 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgcattgaattgtaagccactaaggtggtgttagtgtaatagacttg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11254287 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgctttgaattgtaagccactaaggtggtgttagtgtcatagacttg 11254188  T
Q  115 gagaggtgtgagaatttaggcaattgagt 143  Q
    |||||||||||||||||||||||||||||    
T  11254187 gagaggtgtgagaatttaggcaattgagt 11254159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11256792 - 11256664
Alignment:
Q  15 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgcattgaattgtaagccactaaggtggtgttagtgtaatagacttg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11256792 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgctttgaattgtaagccactaaggtggtgttagtgtcatagacttg 11256693  T
Q  115 gagaggtgtgagaatttaggcaattgagt 143  Q
    |||||||||||||||||||||||||||||    
T  11256692 gagaggtgtgagaatttaggcaattgagt 11256664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11259298 - 11259170
Alignment:
Q  15 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgcattgaattgtaagccactaaggtggtgttagtgtaatagacttg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11259298 caaagggatggatgaggttgttaactctgaacagttttaatggtaagttgagctgctttgaattgtaagccactaaggtggtgttagtgtcatagacttg 11259199  T
Q  115 gagaggtgtgagaatttaggcaattgagt 143  Q
    |||||||||||||||||||||||||||||    
T  11259198 gagaggtgtgagaatttaggcaattgagt 11259170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 11294794 - 11294682
Alignment:
Q  31 gttgttaactctgaacagttttaatggtaagttgagctgcattgaattgtaagccactaaggtggtgttagtgtaatagacttggagaggtgtgagaatt 130  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11294794 gttgttaactctgaacagttttaatggtaagttgagctgctttgaattgtaagtcactaaggtggtgttagtgtaatagacttggagaggtgtgagaatt 11294695  T
Q  131 taggcaattgagt 143  Q
    |||||||||||||    
T  11294694 taggcaattgagt 11294682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 10651028 - 10650937
Alignment:
Q  29 aggttgttaactctgaacagttttaatggtaagttgagctgcattgaat-tgtaagccactaaggtggtgttagtgtaatagacttggagag 119  Q
    |||| |||||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  10651028 aggtggttaactctgaacacttttattggtaagttgagctgctttgaatctgtaagccactaaggtggtgttagtgtaataaacttggagag 10650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 44 - 342
Target Start/End: Complemental strand, 9438660 - 9438371
Alignment:
Q  44 aacagttttaatggtaagttgagctgcattgaat-tgtaagccactaaggtggtgttagtgtaatagacttggagaggtgtgagaatttaggcaattgag 142  Q
    ||||||||||||| |||||| |||||| |||||| ||||| || ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||||    
T  9438660 aacagttttaatgttaagttcagctgctttgaatctgtaacccgctaaggtggtgttagtgtaatagacatggagcggcaggagactttaggcaattgag 9438561  T
Q  143 tattcgaggttcaactatgaagagttatgtttcttttaaannnnnnnatattgtttgatcatgatgatgcaattgttcaacactttctgttcttcacatc 242  Q
    |||| ||||||||||||||||||||  ||||||||||||        || |||||  || ||||   |||||||||| ||||| || |||||| ||||||    
T  9438560 tattggaggttcaactatgaagagtcgtgtttcttttaa----ttttattttgttgtatgatga--gtgcaattgttaaacac-ttatgttctacacatc 9438468  T
Q  243 taatttgttctaatcgctgaaatgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaa 342  Q
    |||||||||||||||  |||||||||||||| | |||   || |||||||| ||||||| ||| |||| |||| ||||||||||||| ||||| ||||||    
T  9438467 taatttgttctaatcattgaaatgtttataatttgta---tcgtctataatttatatttctattgtttcggaaggcattgaaaagcattattttttttaa 9438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 28752757 - 28752662
Alignment:
Q  237 cacatctaatttgttctaatcgctgaaatgtttataactagtatcttcttctataatctatatttttatcgttttggaatgcattgaaaagcaatattt 335  Q
    ||||||||||||||| ||||| || |||||||||||| | ||||||| |   || || ||||||||||||||||||||||||||||||  |||||||||    
T  28752757 cacatctaatttgttttaatcacttaaatgtttataaattgtatctttt---atgatttatatttttatcgttttggaatgcattgaagtgcaatattt 28752662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 285 - 375
Target Start/End: Original strand, 36320015 - 36320105
Alignment:
Q  285 ttctataatctatatttttatcgttttggaatgcattgaaaagcaatatttcttttaaatatattaatcgacttcctgcggatttccctgc 375  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||| ||||  ||||||||  || |||| | |||| |||||||| |||||    
T  36320015 ttctataatttatatttttatcgttttggaatgcaatgaagagcattattaattttaaatcaatcaatcaatttcccgcggatttacctgc 36320105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 36326442 - 36326486
Alignment:
Q  285 ttctataatctatatttttatcgttttggaatgcattgaaaagca 329  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  36326442 ttctataatttatatttttatcgttttggaatgcaatgaagagca 36326486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 16999633 - 16999568
Alignment:
Q  42 tgaacagttttaatggtaagttgagctgcattgaat-tgtaagccactaaggtggtgttagtgtaa 106  Q
    |||||| |||||||||||||||||  ||| |||||| ||||||| |||||| ||| ||||||||||    
T  16999633 tgaacatttttaatggtaagttgaattgctttgaatctgtaagctactaagttggggttagtgtaa 16999568  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 553
Target Start/End: Original strand, 19935064 - 19935164
Alignment:
Q  455 ctcctcaaatactgacctaatatttcctgcagattttttctcttttcttacggatcctaaaatcct-aggaaacaattagcc-tcaaggtattatctggg 552  Q
    ||||||||| ||||||| ||| |||||||| ||| |||   | |||| | |||||||||||||||| |||||||||||| || | ||||||||| |||||    
T  19935064 ctcctcaaacactgaccgaatgtttcctgcggatatttgtacctttcctgcggatcctaaaatcctaaggaaacaattacccatgaaggtattacctggg 19935163  T
Q  553 a 553  Q
    |    
T  19935164 a 19935164  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 11762765 - 11762822
Alignment:
Q  50 tttaatggtaagttgagctgcattgaat-tgtaagccactaaggtggtgttagtgtaa 106  Q
    ||||||| ||||||||| ||  |||||| |||||||||||||||||||||||||||||    
T  11762765 tttaatgataagttgagttgttttgaatatgtaagccactaaggtggtgttagtgtaa 11762822  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 36015400 - 36015465
Alignment:
Q  42 tgaacagttttaatggtaagttgagctgcattgaat-tgtaagccactaaggtggtgttagtgtaa 106  Q
    ||||||||| ||||| | ||||||| |||||||| | | |||||||||||||||||||||||||||    
T  36015400 tgaacagttctaatgattagttgagttgcattgattctctaagccactaaggtggtgttagtgtaa 36015465  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 36870373 - 36870337
Alignment:
Q  230 tgttcttcacatctaatttgttctaatcgctgaaatg 266  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  36870373 tgttctacacatctaatttgttttaatcgctgaaatg 36870337  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 65159 - 65118
Alignment:
Q  283 tcttctataatctatatttttatcgttttggaatgcattgaa 324  Q
    ||||||||||| |||||||||||| |||||||||||| ||||    
T  65159 tcttctataatttatatttttatcattttggaatgcaatgaa 65118  T

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