View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19061_low_10 (Length: 207)
Name: NF19061_low_10
Description: NF19061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19061_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 1294617 - 1294786
Alignment:
| Q |
18 |
tagggttattcttccaaccgagttattccaataattttcatattcaaccgagttagaataattaaaatatcgaaactattgggtccgacattgtgaccaa |
117 |
Q |
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| T |
1294617 |
tagggttattcttccaaacgagttattccaataattttcatattccac----ttagaataattaaaatatcgaaactattaggtccgacattgtgaccaa |
1294712 |
T |
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| Q |
118 |
gttcaaacttcaactctttctctttatctatctaaaaaataagaccaaactaatataatagctaaagaaatgat |
191 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1294713 |
gttcaaacttcaactctttctctttatatatctaaaaaataagaccaaactaatataatagctaaagaaatgat |
1294786 |
T |
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