View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19062_low_10 (Length: 445)
Name: NF19062_low_10
Description: NF19062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19062_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 14 - 434
Target Start/End: Complemental strand, 6125911 - 6125494
Alignment:
| Q |
14 |
caacaactactaccaaaaacaatatctgtttcatccatcttcttaaatctcaatcacccaaaccgaaggatgcctcatcctgagttgattccctttgaaa |
113 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
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| T |
6125911 |
caacaactactaccaaaaacaatatctgtttcatccatcttcttaaatctcaatcacccaaaccgaacgatgcctcatcctgagttgattcccttagaaa |
6125812 |
T |
|
| Q |
114 |
gcctcattcataaattgactatgcagatagcttcccacaattttggacgtgttcatggattgtatgcaaaattggaaaggcttcgtgctcgagttgaagt |
213 |
Q |
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| T |
6125811 |
gcctcattcataaattgactatg---atagctttccacaattttggacgtgttcatggattgtatgcaaaattggaaaggcttcgtgctggagttgaaga |
6125715 |
T |
|
| Q |
214 |
aatcaaagcaatttttgaggatgatcacaacaaaattgacaaggattggataagagagataaaagatcaggtttatgctgctgatgacttcttcgatgaa |
313 |
Q |
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||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6125714 |
aatcaaagcaatttttgaggatgatcagagaaaaattgacaaggattggataagagagataaaagatcaggtttatgctgctgatgacttcttcgatgaa |
6125615 |
T |
|
| Q |
314 |
attgctaccgaaattttgcgtcttgatggtgggaaggtacgcagtttattttcttgcattaatgcatttgtgtttcggttacaaattgctcgtgatatag |
413 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| |
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| T |
6125614 |
attgctaccgaaattttgcgtcttgatggtgggaaggtacgcagtttattttcttgcattaatgcatttgtttttcagttacaaattgctcgtgaaatag |
6125515 |
T |
|
| Q |
414 |
atgagataggaaagagtttag |
434 |
Q |
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| T |
6125514 |
atgagataggaaagaatttag |
6125494 |
T |
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