View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19062_low_35 (Length: 208)
Name: NF19062_low_35
Description: NF19062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19062_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 43050959 - 43051150
Alignment:
| Q |
9 |
gatgtcgaagaatattcagatatatctagtatgacgaatgaccaaaaatatatatcttagcaaaaatagatttctttcaagtatgcaagagttagaaa-- |
106 |
Q |
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| T |
43050959 |
gatgttgaataatattcagatatatctagtatgacgaatgaccaaaaatatacatcttagcaaaaatagatttctttcaagtatgcaagagttagaaaga |
43051058 |
T |
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| Q |
107 |
-----gaatggtgcacatcattcttcattttaggtaacaagcaaaatacatatatttttct-ttattattgagtaatagtcatgttgatgat |
192 |
Q |
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| T |
43051059 |
atggtgaatggtgcgcatcattcttcattttaggtaacaagcaaaatacacatatttttttattattattgagtaatagtcatgttgatgat |
43051150 |
T |
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