View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19063_high_26 (Length: 242)

Name: NF19063_high_26
Description: NF19063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19063_high_26
NF19063_high_26
[»] chr6 (11 HSPs)
chr6 (1-241)||(30955204-30955444)
chr6 (1-241)||(30944944-30945184)
chr6 (1-241)||(31145397-31145637)
chr6 (1-241)||(31171710-31171950)
chr6 (1-219)||(31189455-31189673)
chr6 (2-219)||(31224476-31224693)
chr6 (1-219)||(30992453-30992671)
chr6 (1-241)||(30960949-30961189)
chr6 (1-241)||(31201262-31201502)
chr6 (1-241)||(31214185-31214425)
chr6 (1-216)||(31229759-31229974)
[»] chr7 (9 HSPs)
chr7 (143-221)||(31618457-31618535)
chr7 (146-219)||(31438982-31439055)
chr7 (143-219)||(31541209-31541285)
chr7 (137-209)||(31585591-31585663)
chr7 (140-215)||(31608444-31608519)
chr7 (143-221)||(31572804-31572881)
chr7 (8-96)||(31576052-31576140)
chr7 (8-48)||(31585462-31585502)
chr7 (8-96)||(31604718-31604806)
[»] chr1 (5 HSPs)
chr1 (134-215)||(9233930-9234011)
chr1 (137-219)||(49725148-49725230)
chr1 (137-219)||(49728570-49728652)
chr1 (134-215)||(9384383-9384464)
chr1 (143-215)||(11011057-11011129)
[»] chr4 (1 HSPs)
chr4 (140-219)||(15063329-15063408)
[»] chr8 (1 HSPs)
chr8 (140-221)||(44035640-44035721)


Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 30955444 - 30955204
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30955444 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 30955345  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30955344 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 30955245  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30955244 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 30955204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 30945184 - 30944944
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30945184 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 30945085  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30945084 gacatgaaaatagtgctctctttcttgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgcggtt 30944985  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||| |||||||||||||||||| ||||||| |||||||||    
T  30944984 ttatgtcaaaatgtaaaatccggatattacaccccctatgc 30944944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31145397 - 31145637
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| ||||||  || |    
T  31145397 catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct 31145496  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | ||| |||||||||  |   ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31145497 gacattgaaataatgctctcttgttttggacagagttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggtt 31145596  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||| |||||||||||||| || ||  ||||||| ||||||    
T  31145597 ttatgtcaaaatgtaaaattcgagtggtacatcctctatgc 31145637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31171710 - 31171950
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| ||||||  || |    
T  31171710 catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct 31171809  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | ||| |||||||||  |   ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31171810 gacattgaaataatgctctcttgttttggacagagttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggtt 31171909  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||| |||||||||||||| || ||  ||||||| ||||||    
T  31171910 ttatgtcaaaatgtaaaattcgagtggtacatcctctatgc 31171950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31189455 - 31189673
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| ||||||  || |    
T  31189455 catcattccataactataaacatcagatttgtgtgaaactcctccaaaatgtctattccacacttctggagctacatatcccattgtccctctttgatct 31189554  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    | |||  | ||| |||||||||| |   ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  31189555 gtcatcgaaataatgctctctttttttggacagagttttgcaagtccaaaatctgaaatttttggacataaattctcatctaaaagaatgttatgtggtt 31189654  T
Q  201 ttatatcaaaatgtaaaat 219  Q
    |||| || |||||||||||    
T  31189655 ttatgtcgaaatgtaaaat 31189673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 31224693 - 31224476
Alignment:
Q  2 atcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcatttg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | ||||||||||  || ||    
T  31224693 atcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttctggagctacataccccattgttcctctttgatctg 31224594  T
Q  102 acatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttt 201  Q
    ||||  | | | |||| ||||||  |||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||    
T  31224593 acattgaaacaatgctttctttcctgagacatagttttgcaagtccaaaatctgaaatcttcggacataaattatcatctaaaaggatgttgtgtggttt 31224494  T
Q  202 tatatcaaaatgtaaaat 219  Q
    ||| ||||||||||||||    
T  31224493 tatgtcaaaatgtaaaat 31224476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 30992671 - 30992453
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | ||| ||||||  ||      
T  30992671 catcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttctggagctacataccccattgtccctctttgatcc 30992572  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | | | |||| |||||||  || || |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  30992571 gacatcgaaacaatgctgtctttcttcaggcaaagctttgccagtccaaaatctgagatctttggacaaaaattctcatctaaaagaatgttatgtggtt 30992472  T
Q  201 ttatatcaaaatgtaaaat 219  Q
    |||| ||||||||||||||    
T  30992471 ttatgtcaaaatgtaaaat 30992453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 30961189 - 30960949
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || | ||| ||||||  ||      
T  30961189 catcattccataactataaacatcagacttgtgtgaaactcctccaaaatgtctattccacacttcaggagctacataccccattgtccctctttgatcc 30961090  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | | | |||| |||||||  || || |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  30961089 gacatcgaaacaatgctgtctttcttcaggcaaagctttgccagtccaaaatctgagatctttggacaaaaattctcatctaaaagaatgttatgtggtt 30960990  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||| |||||||||||||| || |||  |||||| ||||||    
T  30960989 ttatgtcaaaatgtaaaattcgagtagcacatcctctatgc 30960949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31201262 - 31201502
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||| |  || ||||||  || |    
T  31201262 catcattccataactataaacatcggacttgtatgaaactcctccaaaatgtctattccacatttctggagctacatatcccatagtccctctttgatct 31201361  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | ||| ||||||| |||    |||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  31201362 gacatcgaaataatgctctcgttccttggacaaagttttgcaagtccaaaatctgaaatctttggacaaaaattctcatctaaaagaatattatgtggtt 31201461  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    |||| || ||||||||||| || ||  ||||||| ||||||    
T  31201462 ttatgtcgaaatgtaaaattcgagtggtacatcctctatgc 31201502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 31214425 - 31214185
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||| ||||||||||||||||||||||  ||||| |||||||| | ||||||||| |  || |||||||||||||| |  |||||||| |||  |    
T  31214425 catcattccgtaactataaacatcagacttgtacgaaacgcctccaaagtttctattccacaactcaggagctacatatcccatcgttcctctagcacct 31214326  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | ||| |||| ||||||| |||||| ||  ||||||||||||||||||| ||||||||||| |||||||||||||| | ||| ||||||||||    
T  31214325 gacatcgaaataatgctttctttcttgagacaaagtcttgcaagtccaaaatctgatatctttggacaaaaattttcatctaataaaatattatgtggtt 31214226  T
Q  201 ttatatcaaaatgtaaaatccgggtattacatcccctatgc 241  Q
    ||||||||||||||||||| || ||| | ||||| ||||||    
T  31214225 ttatatcaaaatgtaaaattcgagtactgcatcctctatgc 31214185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31229974 - 31229759
Alignment:
Q  1 catcattccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgcattt 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||| | | |||||||||  || ||||||||||| || | ||| ||||| || | |    
T  31229974 catcattccataactataaacgtcagacttgtgcgaaactcatccaaaatttatattccataactcaggagctacataccccattgtccctctagcgtct 31229875  T
Q  101 gacatgaatatagtgctctctttctcgagacagagctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggtt 200  Q
    |||||  | ||| ||||||||||||   | || ||  ||| ||||||||||||||| ||||||||||| ||||| |||| ||| || |||||||||||||    
T  31229874 gacatagaaataatgctctctttcttatggcaaagtcttgaaagtccaaaatctgatatctttggacaaaaattctcatataagaggatgttatgtggtt 31229775  T
Q  201 ttatatcaaaatgtaa 216  Q
    | || |||||||||||    
T  31229774 tgatgtcaaaatgtaa 31229759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 31618457 - 31618535
Alignment:
Q  143 agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatcc 221  Q
    |||||||||||||| || |||||||| |||| |||||| ||||||||||| || ||||||||||||| ||||| |||||    
T  31618457 agtccaaaatctgagatttttggacaaaaatcttcatccaaaagaatgttttgaggttttatatcaagatgtagaatcc 31618535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 31439055 - 31438982
Alignment:
Q  146 ccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat 219  Q
    |||||||| || || |||||||| |||| |||||||||||||||||| || ||||| ||||||| ||| |||||    
T  31439055 ccaaaatcagatatttttggacaaaaatcttcatctaaaagaatgttttgaggtttgatatcaagatgcaaaat 31438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 31541209 - 31541285
Alignment:
Q  143 agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat 219  Q
    ||||||||||| || || || || || ||||||||||| ||||||||||| |||||||| ||||||| ||| |||||    
T  31541209 agtccaaaatcagagattttggggcaaaaattttcatccaaaagaatgttttgtggtttgatatcaagatgcaaaat 31541285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 31585591 - 31585663
Alignment:
Q  137 tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaa 209  Q
    ||||| ||||||||||| || || |||||||| |||| |||||| ||||||||||| || ||||| |||||||    
T  31585591 tttgctagtccaaaatcagatatttttggacaaaaatcttcatccaaaagaatgttttggggtttgatatcaa 31585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 31608444 - 31608519
Alignment:
Q  140 gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta 215  Q
    |||||||||||||| || || |||||||| || | |||||| ||||||||||| || ||||| ||||||| |||||    
T  31608444 gcaagtccaaaatcagatatttttggacaaaagtcttcatccaaaagaatgttttgaggtttgatatcaagatgta 31608519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 31572881 - 31572804
Alignment:
Q  143 agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatcc 221  Q
    ||||||||||| || || ||||| || |||| |||||| ||||||||||| || ||||||||||||| ||| |||||||    
T  31572881 agtccaaaatcagagatttttgggcaaaaatcttcatccaaaagaatgttttg-ggttttatatcaagatgcaaaatcc 31572804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31576052 - 31576140
Alignment:
Q  8 ccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgc 96  Q
    ||||||||||| |||||||| ||||  |||||||| ||||||  ||||||  || ||||||| || | |||||| | ||||||||||||    
T  31576052 ccataactatatacatcagatttgtaagaaactccaccaaatgatctattaaatgcttctggtgccatatatcctattgttcctcttgc 31576140  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 31585462 - 31585502
Alignment:
Q  8 ccataactataaacatcagacttgtgtgaaactcctccaaa 48  Q
    ||||||||||| |||||||||||||| |||||||| |||||    
T  31585462 ccataactatacacatcagacttgtgagaaactccaccaaa 31585502  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31604718 - 31604806
Alignment:
Q  8 ccataactataaacatcagacttgtgtgaaactcctccaaattgtctattccatacttctggagctacatatccgactgttcctcttgc 96  Q
    ||||||||||| |||||||| ||||  |||||||| ||||||  ||||||  || ||||||| || | |||||| | ||||||||||||    
T  31604718 ccataactatatacatcagatttgtaagaaactccaccaaatgatctattaaatgcttctggtgccatatatcctattgttcctcttgc 31604806  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 9234011 - 9233930
Alignment:
Q  134 agctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta 215  Q
    |||||||||||||||||||| |||| |||||||   |||| ||| |||| |||||| ||||| || || |||||||||||||    
T  9234011 agctttgcaagtccaaaatccgaaacctttggaacgaaatcttcgtctagaagaatattatgaggcttgatatcaaaatgta 9233930  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 49725230 - 49725148
Alignment:
Q  137 tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat 219  Q
    ||||||||||||||||| |||||  | ||    ||||| ||||| |||||||||||||| |||||||| |||||||| |||||    
T  49725230 tttgcaagtccaaaatccgaaattctggggttgaaattctcatccaaaagaatgttatgaggttttatgtcaaaatgcaaaat 49725148  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 49728652 - 49728570
Alignment:
Q  137 tttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat 219  Q
    ||||||||||||||||| |||| ||| ||||| ||||  || ||||  |  || ||||| |||||||||||||||||||||||    
T  49728652 tttgcaagtccaaaatccgaaaccttaggacaaaaatcatcgtctagcaatatattatgaggttttatatcaaaatgtaaaat 49728570  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 9384383 - 9384464
Alignment:
Q  134 agctttgcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta 215  Q
    |||||||||||||||||||| |||| |||||||   || | ||| |||| |||||| ||||| || || |||||||||||||    
T  9384383 agctttgcaagtccaaaatccgaaacctttggaacaaactcttcgtctagaagaatattatgaggcttgatatcaaaatgta 9384464  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 11011057 - 11011129
Alignment:
Q  143 agtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgta 215  Q
    ||||||||||| ||||  ||||||   ||||||||||| | |||||||||||| || ||||||||||| ||||    
T  11011057 agtccaaaatcagaaacttttggattgaaattttcatcaagaagaatgttatgaggctttatatcaaagtgta 11011129  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 15063408 - 15063329
Alignment:
Q  140 gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaat 219  Q
    ||||| |||||||| || || ||||| || |||| |||||||||||||||||| || ||||| ||||||| ||| |||||    
T  15063408 gcaagaccaaaatcagatatttttgggcaaaaatcttcatctaaaagaatgttttgaggtttgatatcaagatgcaaaat 15063329  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 44035721 - 44035640
Alignment:
Q  140 gcaagtccaaaatctgaaatctttggacataaattttcatctaaaagaatgttatgtggttttatatcaaaatgtaaaatcc 221  Q
    |||||||||||||| || ||||| ||||   || |||| || |||||||||||||||||||| || || ||||| |||||||    
T  44035721 gcaagtccaaaatcagatatcttgggacggtaagtttcgtccaaaagaatgttatgtggtttaatgtcgaaatgaaaaatcc 44035640  T

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