View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19063_low_5 (Length: 500)

Name: NF19063_low_5
Description: NF19063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19063_low_5
NF19063_low_5
[»] chr2 (37 HSPs)
chr2 (155-485)||(7297906-7298230)
chr2 (5-150)||(37354095-37354240)
chr2 (6-157)||(33947414-33947565)
chr2 (6-144)||(838068-838206)
chr2 (22-149)||(36173182-36173309)
chr2 (30-157)||(42263339-42263466)
chr2 (6-156)||(42089001-42089143)
chr2 (6-146)||(7529700-7529841)
chr2 (30-150)||(31011710-31011829)
chr2 (15-146)||(13000907-13001038)
chr2 (6-81)||(18903981-18904056)
chr2 (15-156)||(37077286-37077427)
chr2 (155-384)||(7291202-7291428)
chr2 (102-150)||(3376269-3376317)
chr2 (102-157)||(25787530-25787585)
chr2 (15-150)||(44360549-44360684)
chr2 (68-150)||(11222308-11222390)
chr2 (100-150)||(15182993-15183043)
chr2 (102-150)||(10263959-10264007)
chr2 (102-150)||(10812402-10812450)
chr2 (70-150)||(13215564-13215644)
chr2 (102-150)||(36375776-36375824)
chr2 (70-149)||(25186823-25186902)
chr2 (15-150)||(36404833-36404968)
chr2 (102-157)||(37093652-37093707)
chr2 (30-157)||(37660868-37660995)
chr2 (100-150)||(34357379-34357429)
chr2 (31-148)||(928028-928144)
chr2 (15-84)||(25787453-25787522)
chr2 (102-150)||(1259621-1259669)
chr2 (102-150)||(3363787-3363835)
chr2 (102-150)||(13965810-13965858)
chr2 (102-150)||(15893572-15893620)
chr2 (102-150)||(26342783-26342831)
chr2 (102-150)||(30264594-30264642)
chr2 (102-150)||(41885828-41885876)
chr2 (102-150)||(43077495-43077543)
[»] chr8 (44 HSPs)
chr8 (5-157)||(45317758-45317910)
chr8 (18-157)||(40608157-40608296)
chr8 (6-156)||(13132101-13132249)
chr8 (15-146)||(40602750-40602881)
chr8 (6-145)||(6661060-6661199)
chr8 (6-145)||(6741462-6741601)
chr8 (23-157)||(30205580-30205713)
chr8 (6-157)||(31760008-31760160)
chr8 (30-150)||(18842660-18842780)
chr8 (15-150)||(18291579-18291714)
chr8 (15-149)||(9301533-9301667)
chr8 (15-150)||(15596460-15596595)
chr8 (7-150)||(17074571-17074714)
chr8 (7-150)||(17573556-17573699)
chr8 (33-147)||(8554008-8554122)
chr8 (15-149)||(10180486-10180620)
chr8 (30-150)||(2888457-2888577)
chr8 (6-150)||(14061138-14061282)
chr8 (70-150)||(27911661-27911741)
chr8 (70-150)||(27958080-27958160)
chr8 (102-149)||(11994084-11994131)
chr8 (15-150)||(12248759-12248894)
chr8 (15-146)||(12342607-12342738)
chr8 (100-150)||(26062908-26062958)
chr8 (69-150)||(35029716-35029797)
chr8 (6-119)||(38074383-38074496)
chr8 (62-150)||(8453225-8453313)
chr8 (108-156)||(13328179-13328227)
chr8 (102-150)||(35052256-35052304)
chr8 (102-150)||(38128536-38128584)
chr8 (6-157)||(29126009-29126159)
chr8 (15-86)||(43553155-43553226)
chr8 (100-150)||(25703567-25703617)
chr8 (100-150)||(25812738-25812788)
chr8 (63-157)||(41643472-41643566)
chr8 (102-147)||(33935052-33935097)
chr8 (102-150)||(39303504-39303553)
chr8 (102-146)||(4057491-4057535)
chr8 (102-150)||(14228311-14228359)
chr8 (102-150)||(14263747-14263795)
chr8 (30-150)||(23855688-23855808)
chr8 (68-156)||(36058401-36058489)
chr8 (102-150)||(38482781-38482829)
chr8 (58-142)||(39663937-39664021)
[»] chr4 (52 HSPs)
chr4 (5-150)||(38009756-38009901)
chr4 (6-156)||(8456895-8457045)
chr4 (6-156)||(34603734-34603884)
chr4 (6-157)||(1391154-1391305)
chr4 (6-146)||(48087808-48087948)
chr4 (6-157)||(14949067-14949218)
chr4 (6-156)||(14090350-14090500)
chr4 (6-156)||(18091352-18091502)
chr4 (18-159)||(26916046-26916188)
chr4 (34-153)||(30151537-30151656)
chr4 (7-150)||(52061669-52061812)
chr4 (5-142)||(56499610-56499747)
chr4 (6-157)||(1180884-1181035)
chr4 (15-150)||(23719774-23719909)
chr4 (15-145)||(48509865-48509994)
chr4 (30-144)||(38866037-38866149)
chr4 (6-145)||(39309041-39309179)
chr4 (49-150)||(54231692-54231793)
chr4 (102-150)||(30939361-30939409)
chr4 (108-156)||(33751327-33751375)
chr4 (7-150)||(19093143-19093286)
chr4 (15-86)||(37502141-37502212)
chr4 (30-149)||(47596604-47596723)
chr4 (100-150)||(56576094-56576144)
chr4 (100-157)||(19527203-19527260)
chr4 (108-157)||(31861969-31862018)
chr4 (102-150)||(5374340-5374388)
chr4 (102-150)||(9834486-9834534)
chr4 (102-150)||(12252298-12252346)
chr4 (102-150)||(22828391-22828439)
chr4 (102-150)||(35231896-35231944)
chr4 (102-150)||(36659417-36659465)
chr4 (15-146)||(43086522-43086653)
chr4 (102-150)||(44013903-44013951)
chr4 (102-150)||(44217912-44217960)
chr4 (15-150)||(354085-354220)
chr4 (100-147)||(17698666-17698713)
chr4 (63-150)||(45725703-45725790)
chr4 (31-146)||(51654867-51654981)
chr4 (112-151)||(55703136-55703175)
chr4 (105-150)||(3036592-3036637)
chr4 (108-149)||(23237842-23237883)
chr4 (113-150)||(36408969-36409006)
chr4 (113-150)||(36423135-36423172)
chr4 (100-149)||(47428723-47428772)
chr4 (100-149)||(48782403-48782452)
chr4 (100-145)||(55430302-55430347)
chr4 (102-150)||(8735595-8735643)
chr4 (102-146)||(13629187-13629231)
chr4 (6-86)||(26933826-26933905)
chr4 (102-150)||(44069237-44069285)
chr4 (102-150)||(53599776-53599824)
[»] chr5 (41 HSPs)
chr5 (22-159)||(36481180-36481317)
chr5 (6-146)||(13957150-13957290)
chr5 (15-146)||(4440187-4440318)
chr5 (31-156)||(8849118-8849242)
chr5 (15-156)||(36239556-36239697)
chr5 (15-150)||(4985161-4985296)
chr5 (5-150)||(18676400-18676544)
chr5 (7-147)||(7408421-7408561)
chr5 (103-150)||(3892997-3893044)
chr5 (15-150)||(4175466-4175601)
chr5 (68-147)||(9958872-9958951)
chr5 (15-150)||(16124246-16124381)
chr5 (100-150)||(38910456-38910506)
chr5 (6-156)||(40927242-40927391)
chr5 (104-149)||(6689786-6689831)
chr5 (15-76)||(21606318-21606379)
chr5 (49-150)||(28024245-28024346)
chr5 (102-150)||(2673964-2674012)
chr5 (7-147)||(3243886-3244026)
chr5 (102-150)||(8825242-8825290)
chr5 (30-157)||(11413509-11413636)
chr5 (102-150)||(12665043-12665091)
chr5 (17-156)||(21157733-21157872)
chr5 (102-150)||(25344145-25344193)
chr5 (49-157)||(28446964-28447072)
chr5 (70-150)||(31803477-31803557)
chr5 (102-149)||(6754166-6754213)
chr5 (6-149)||(25785996-25786139)
chr5 (100-147)||(26854084-26854131)
chr5 (102-156)||(4098516-4098570)
chr5 (102-156)||(13703282-13703336)
chr5 (108-150)||(18000523-18000565)
chr5 (100-145)||(4017597-4017642)
chr5 (102-147)||(9076256-9076301)
chr5 (17-86)||(25027625-25027694)
chr5 (102-150)||(425309-425356)
chr5 (102-150)||(1795103-1795151)
chr5 (102-150)||(18794968-18795016)
chr5 (17-156)||(21150592-21150731)
chr5 (102-146)||(34261497-34261541)
chr5 (102-150)||(39073229-39073277)
[»] chr3 (34 HSPs)
chr3 (6-156)||(35077494-35077644)
chr3 (5-150)||(35458499-35458644)
chr3 (18-156)||(47843832-47843970)
chr3 (6-159)||(53290747-53290900)
chr3 (15-149)||(28226541-28226666)
chr3 (6-156)||(24569657-24569810)
chr3 (31-164)||(26748485-26748617)
chr3 (15-150)||(33491134-33491269)
chr3 (6-145)||(34750762-34750900)
chr3 (102-150)||(13158434-13158482)
chr3 (102-150)||(35315335-35315383)
chr3 (30-150)||(40318923-40319043)
chr3 (30-150)||(41425760-41425880)
chr3 (15-150)||(41351189-41351324)
chr3 (100-150)||(49123723-49123773)
chr3 (16-156)||(2642819-2642959)
chr3 (104-149)||(45513314-45513359)
chr3 (100-149)||(53745278-53745327)
chr3 (30-159)||(7678140-7678270)
chr3 (70-150)||(20848719-20848799)
chr3 (102-150)||(29698194-29698242)
chr3 (70-150)||(33874541-33874621)
chr3 (102-150)||(45101353-45101401)
chr3 (102-150)||(54106466-54106514)
chr3 (15-150)||(43775385-43775520)
chr3 (15-145)||(24064-24194)
chr3 (102-160)||(43554592-43554650)
chr3 (100-149)||(44543727-44543776)
chr3 (108-148)||(19550455-19550495)
chr3 (6-86)||(23771394-23771474)
chr3 (102-146)||(32980843-32980887)
chr3 (102-150)||(34266435-34266483)
chr3 (102-150)||(51219088-51219136)
chr3 (102-150)||(52663645-52663693)
[»] chr7 (28 HSPs)
chr7 (6-149)||(9601886-9602029)
chr7 (6-149)||(9829457-9829600)
chr7 (16-142)||(33072162-33072288)
chr7 (15-153)||(35860081-35860219)
chr7 (31-146)||(9142260-9142374)
chr7 (15-150)||(47408229-47408364)
chr7 (30-146)||(28608725-28608841)
chr7 (15-161)||(26724040-26724186)
chr7 (69-150)||(33258051-33258132)
chr7 (102-150)||(17896483-17896531)
chr7 (102-146)||(22950814-22950858)
chr7 (70-150)||(31815061-31815140)
chr7 (102-146)||(46715308-46715352)
chr7 (102-150)||(47459841-47459889)
chr7 (15-91)||(48981430-48981506)
chr7 (15-150)||(33921766-33921901)
chr7 (68-150)||(5732065-5732147)
chr7 (15-149)||(7477191-7477325)
chr7 (68-150)||(33173976-33174058)
chr7 (6-157)||(8965885-8966036)
chr7 (102-150)||(32528320-32528368)
chr7 (102-150)||(3310408-3310456)
chr7 (102-150)||(8382029-8382077)
chr7 (102-150)||(10227459-10227507)
chr7 (102-150)||(30866728-30866776)
chr7 (102-146)||(31430762-31430806)
chr7 (102-150)||(32966041-32966089)
chr7 (102-150)||(36922443-36922491)
[»] chr1 (41 HSPs)
chr1 (6-156)||(52759135-52759285)
chr1 (25-141)||(52825396-52825512)
chr1 (5-147)||(6931219-6931361)
chr1 (15-146)||(2572087-2572217)
chr1 (18-161)||(41155394-41155536)
chr1 (15-156)||(10630527-10630667)
chr1 (30-150)||(31487765-31487885)
chr1 (15-157)||(13699290-13699432)
chr1 (5-146)||(9127775-9127916)
chr1 (15-146)||(8973442-8973572)
chr1 (15-150)||(51974157-51974292)
chr1 (80-147)||(22154626-22154694)
chr1 (7-150)||(2059798-2059941)
chr1 (102-149)||(5598248-5598295)
chr1 (15-150)||(35700361-35700496)
chr1 (68-150)||(36318521-36318603)
chr1 (102-156)||(37609284-37609338)
chr1 (33-146)||(45230652-45230764)
chr1 (102-150)||(1677401-1677449)
chr1 (102-150)||(13566882-13566930)
chr1 (102-150)||(29830956-29831004)
chr1 (102-150)||(35531281-35531329)
chr1 (63-147)||(36850801-36850885)
chr1 (102-146)||(37437043-37437087)
chr1 (102-150)||(38648660-38648708)
chr1 (102-150)||(43500709-43500757)
chr1 (15-150)||(9362089-9362224)
chr1 (100-147)||(12124845-12124892)
chr1 (102-141)||(38569616-38569655)
chr1 (102-149)||(52749218-52749265)
chr1 (108-150)||(35483767-35483809)
chr1 (68-150)||(52649715-52649797)
chr1 (15-147)||(10506927-10507059)
chr1 (30-146)||(10676033-10676149)
chr1 (102-150)||(12231057-12231105)
chr1 (102-150)||(13507973-13508021)
chr1 (102-150)||(13515161-13515209)
chr1 (102-150)||(19929452-19929500)
chr1 (102-150)||(20605610-20605658)
chr1 (101-149)||(33720719-33720767)
chr1 (102-150)||(42787139-42787187)
[»] scaffold0002 (3 HSPs)
scaffold0002 (30-157)||(492174-492301)
scaffold0002 (102-150)||(148506-148554)
scaffold0002 (15-121)||(369519-369625)
[»] chr6 (20 HSPs)
chr6 (15-157)||(15432787-15432928)
chr6 (15-147)||(23777412-23777544)
chr6 (15-146)||(26485679-26485810)
chr6 (15-150)||(30416065-30416200)
chr6 (71-150)||(34607270-34607349)
chr6 (7-149)||(22784659-22784801)
chr6 (15-150)||(22050164-22050299)
chr6 (100-150)||(1751421-1751471)
chr6 (15-141)||(11000809-11000934)
chr6 (70-146)||(11129002-11129078)
chr6 (70-150)||(24949278-24949358)
chr6 (15-150)||(7056130-7056265)
chr6 (15-146)||(9838116-9838247)
chr6 (17-149)||(19645713-19645847)
chr6 (102-149)||(24663582-24663629)
chr6 (102-149)||(31244740-31244787)
chr6 (43-150)||(34730704-34730810)
chr6 (102-146)||(3621793-3621837)
chr6 (102-150)||(30388969-30389017)
chr6 (102-150)||(32359430-32359478)
[»] scaffold0236 (1 HSPs)
scaffold0236 (30-150)||(14240-14360)
[»] scaffold0280 (1 HSPs)
scaffold0280 (102-150)||(8357-8405)
[»] scaffold0036 (1 HSPs)
scaffold0036 (7-156)||(23244-23394)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-150)||(147117-147197)
[»] scaffold0886 (1 HSPs)
scaffold0886 (15-86)||(4631-4702)
[»] scaffold0274 (1 HSPs)
scaffold0274 (43-150)||(230-336)
[»] scaffold0343 (1 HSPs)
scaffold0343 (70-147)||(7595-7672)
[»] scaffold0024 (1 HSPs)
scaffold0024 (102-147)||(89373-89418)
[»] scaffold0014 (1 HSPs)
scaffold0014 (100-149)||(195578-195627)
[»] scaffold0040 (1 HSPs)
scaffold0040 (102-150)||(69302-69350)
[»] scaffold0007 (1 HSPs)
scaffold0007 (102-150)||(77291-77339)


Alignment Details
Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 155 - 485
Target Start/End: Complemental strand, 7298230 - 7297906
Alignment:
Q  155 tatgaaagagaacttcgaaactatcagagatattatgcatactgttgaggataaagtaaagtgtctcaaaggcattatacggatttctctctagtaaaaa 254  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  7298230 tatgaaagagaacttcgaaactatcagagatattatgcaaactgttgaggataaagtgaagtgtctcaaaggctttatacggatttctctcaagtaaaaa 7298131  T
Q  255 acatcttcatcctcttagttctgcttattgtctttgtcttttattcccttctgaattgttgcaacttctgctttatttgattatatcattttatatggtt 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7298130 acatcttcatcctcttagttctgcttattgtctttgtcttttattcccttctgaattgttgcaacttctgctttatttgattatatcattttatatggtt 7298031  T
Q  355 gctt-ttttgcttcaatctaaaattaatgaatggattaattatgcttctggcacctacactaaaagaaaataaaagattatgtttctgacccctttatta 453  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  7298030 gctttttttgcttcaatctaaaattaatgaatggattaattatgcttctggcacctacactaaaagaaaataaaagattatgtttctgaccccttta--- 7297934  T
Q  454 atagttaatacagtggaatatatggtagaatt 485  Q
        ||||||||||||||||||||||||||||    
T  7297933 ----ttaatacagtggaatatatggtagaatt 7297906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 37354095 - 37354240
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| ||||||| |||||| |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| | ||  | |||    
T  37354095 gagagagaaaaatatataaaatatgatattaaataattaaagatattataggcaaaacataagttattgtatcaaaagtagtgaaatataattggtgtct 37354194  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||| | ||||| | |||||||||| |||||||||    
T  37354195 tgatttgtgtaaaaaattaaaatgtgacaattaaaatggaacggag 37354240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 33947565 - 33947414
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||| |||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||| ||    
T  33947565 agagagagaaatatataaaatatgatattaaataattaaggatattataggcaaaacataaattattgtatcaaaaatagtgaaatacatttagtatttt 33947466  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | |||||||| ||| ||||||| | |||||||||||| ||| ||| ||||||    
T  33947465 ggtttgtgtagaaaatcaaaatgtgacaattaaaaagaaactgagggagtat 33947414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 838206 - 838068
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||    
T  838206 agagagagaaatatatgaaatatgatattaaataattaaagatattataggcaaaacataagttattgcatcaaaagtagtgaaatgcatttagtgtctt 838107  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaagga 144  Q
    | |||||||||||| |||||||   ||||||||||||||    
T  838106 ggtttgtgtaaaaaatcaaaatgcgacaattaaaaagga 838068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36173182 - 36173309
Alignment:
Q  22 gaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagt 121  Q
    ||||||| |||||||||||| |||||||||||||| |||  |||| ||||||||||||||||||||||||||||||| | | ||| ||||||||||||||    
T  36173182 gaaatatgatattaaataattaaggatattataggtaaaccataaattattgtatcaaaagtagtgaaatacatttagtgttttggtttgtgtaaaaagt 36173281  T
Q  122 caaaatataacaattaaaaaggaacgga 149  Q
    |||||| | ||||||||||| |||||||    
T  36173282 caaaatgtgacaattaaaaaagaacgga 36173309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 42263466 - 42263339
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||| ||||||||||| | ||||  ||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||| ||||| |    
T  42263466 atattaaataattaaggatattattgacaaaccataagttattgtatcaaaaatagtgaaatacatttaatgtcttgatttatgcaaaaagttaaaatgt 42263367  T
Q  130 aacaattaaaaaggaacggagagagtat 157  Q
     ||||||||||| ||||||| |||||||    
T  42263366 gacaattaaaaaagaacggaaagagtat 42263339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 42089001 - 42089143
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| ||||||||||||       ||  |||||| |||||||||||||||||||||||||| | ||||    
T  42089001 agagagagaaatataagaaatatgatattaaataattaaggatattata-------tactagttatcgtatcaaaagtagtgaaatacatttagtgtctt 42089093  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | |||||||||||||| |||||   |||||| ||||||||||||| |||||    
T  42089094 ggtttgtgtaaaaagttaaaatgagacaatt-aaaaggaacggagggagta 42089143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 7529841 - 7529700
Alignment:
Q  6 agagagaagaatatatgaaat-ataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    |||||||  |||||||||||| | |||||||||| || |||| ||||||||| |||  |||| || |||||||||||||||| ||||  |||   | |||    
T  7529841 agagagagaaatatatgaaatgaaaatattaaatgatgaaggctattataggaaaatgataaattgttgtatcaaaagtagtaaaatttattagttgtct 7529742  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    | |||||||||||||| ||||| || ||||||||||||||||    
T  7529741 tcatttgtgtaaaaagacaaaaaatgacaattaaaaaggaac 7529700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 31011829 - 31011710
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    ||||||||||| ||||| ||||||||  |||||| || ||||||||||||||||||  | ||  ||| | | ||||| ||||| ||||| |||||||| |    
T  31011829 atattaaataaacaaggttattatagtaaaaatagaa-ttattgtatcaaaagtagcaacatttattgattgtcttggtttgtataaaatgtcaaaatgt 31011731  T
Q  130 aacaattaaaaaggaacggag 150  Q
    |||||||||||||||||||||    
T  31011730 aacaattaaaaaggaacggag 31011710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 13001038 - 13000907
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   |||||||||||  |||| ||||||||  ||||||| | ||||||||||||||||||| | ||  ||| | | |||| ||||||||    
T  13001038 aatatatgaaatgagatattaaataaataaggctattatagcaaaaatattaattattgtatcaaaagtagtaacatttattgattgtcttaatttgtgt 13000939  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    |||| |||| ||  ||||||||||||| ||||    
T  13000938 aaaatgtcacaaagtaacaattaaaaaagaac 13000907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 18904056 - 18903981
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaa 81  Q
    |||||||  ||||||| |||||| |||||||||||| ||||||||||| | ||||| |||||||||||||| ||||    
T  18904056 agagagagaaatatataaaatatgatattaaataattaaggatattatggacaaaacataagttattgtataaaaa 18903981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 37077286 - 37077427
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| || |||| ||||||||  |||| |||| ||||||||| ||||||||| ||||  ||||  ||||||| |||||||    
T  37077286 aatatatgaaatgagatattaaattatgaaggttattatagaaaaaagataaattattgtataaaaagtagtaaaatgtatttgttatcttggtttgtgt 37077385  T
Q  115 aaaa-agtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||| | ||||||  | ||||||||||||||| |||| |||||    
T  37077386 aaaagactcaaaa-gtgacaattaaaaaggaatggagggagta 37077427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 384
Target Start/End: Complemental strand, 7291428 - 7291202
Alignment:
Q  155 tatgaaagagaacttcgaaactatcagagatattatgcatactgttgaggataaagtaaagtgtc-tcaaaggcattatacggatttctctctagtaaaa 253  Q
    ||||| |||||||||| ||||||| ||||||||||| || ||| | ||||||| ||| ||||||| || ||  |  ||| |  |||| |||| | | |||    
T  7291428 tatgatagagaacttcaaaactatgagagatattatacaaactatggaggatagagtgaagtgtcgtcgaa-actgtatgcaaatttatctcaactcaaa 7291330  T
Q  254 aacatcttcatcctcttagttctgcttattgtctttgtcttttattcccttctgaattgttgcaacttctgctttatttgattatatcattttatatggt 353  Q
    |||||||||||||||||||||||   | |  |  ||||||||||     || |||| |||||||||||||| |||||||||||||||||| ||||||| |    
T  7291329 aacatcttcatcctcttagttctcaatctcattattgtctttta-----ttttgaaatgttgcaacttctggtttatttgattatatcatcttatatgat 7291235  T
Q  354 tgct--tttttgcttcaatctaaaattaatgaa 384  Q
     |||  ||||| ||||||| |||||| ||||||    
T  7291234 cgcttctttttacttcaatttaaaatgaatgaa 7291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 3376317 - 3376269
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  3376317 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 3376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 25787530 - 25787585
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    ||||| |||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  25787530 tcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacagagggagtat 25787585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 44360549 - 44360684
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  ||||  ||||||   ||| ||||| |||||| |||||||||||| | |   ||| | | ||||| |||||||    
T  44360549 aatatatgaaataagatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgt 44360648  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  44360649 aaaatgtcaaaatgtgacaattaaaaaggaacggag 44360684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 11222390 - 11222308
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||| |||||||||||| | |  |||| | ||||||| ||| ||||||| |||||||| | ||||||||||||||||||||    
T  11222390 ttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 11222308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 15183043 - 15182993
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  15183043 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 15182993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10263959 - 10264007
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||||| |||||| |||||||||||||    
T  10263959 tcttggtttgtgtaaaatgtcaaaatatgacaatttaaaaggaacggag 10264007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10812402 - 10812450
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  10812402 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 10812450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 13215564 - 13215644
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | | ||| ||||||||||| |||||||  ||||||||||||||||||||||    
T  13215564 attgtatcaaaagtagtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtaacaattaaaaaggaacggag 13215644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 36375776 - 36375824
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  36375776 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 36375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 25186902 - 25186823
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||||||||| | ||| ||| | ||||||| ||||||||||| |||||||  | ||  |||||||||||||||    
T  25186902 attgtatcaaaagtagtaacatatattgattatcttggtttgtgtaaaatgtcaaaaagtgacggttaaaaaggaacgga 25186823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 36404968 - 36404833
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  |||| ||||||||  ||||||||| |||||| |||||||||||| | |  |||| | ||||||| ||  |||    
T  36404968 aatatatgaaatgagatattaaatgaataaggttattatagtaaaaatataacttattgcatcaaaagtagtaacaatcattgactatcttggttcatgt 36404869  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||  ||||||| | ||||||||||| ||| ||||    
T  36404868 aaaatatcaaaatgtgacaattaaaaatgaatggag 36404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 37093652 - 37093707
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    ||||| ||||||||||| |||||||| | ||||||||||||| |||||| ||||||    
T  37093652 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggtacggagggagtat 37093707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 37660868 - 37660995
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    ||||||||| |  |||| ||||||||| |||| | || || |||||| ||||||||| |||| |||||  | ||||| ||||||||||||    ||| ||    
T  37660868 atattaaatgaggaaggttattataggaaaaagaaaaattgttgtattaaaagtagtaaaatgcatttgttgtcttggtttgtgtaaaaaacttaaaaat 37660967  T
Q  130 aacaattaaaaaggaacggagagagtat 157  Q
    || ||||||||||||| |||| ||||||    
T  37660968 aaaaattaaaaaggaatggagggagtat 37660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 34357379 - 34357429
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| ||| |||| | ||||||||||||||||||||    
T  34357379 tatcttggtttgtgtaaaatgtcgaaatgtgacaattaaaaaggaacggag 34357429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 928144 - 928028
Alignment:
Q  31 tattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatata 130  Q
    |||||||| || |||| ||||||||| |||| |||| || ||  ||||||| |||| |||   ||||  ||||||  ||| ||||||||||||||||||     
T  928144 tattaaatgattaaggttattataggaaaaagataaattgttacatcaaaaatagtaaaagt-atttgttatcttagtttatgtaaaaagtcaaaatatg 928046  T
Q  131 acaattaaaaaggaacgg 148  Q
    ||||||||||| ||||||    
T  928045 acaattaaaaaagaacgg 928028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 25787453 - 25787522
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagta 84  Q
    ||||||||||||  | |||||||| || |||||||||||||| |||  |||| || ||||||||||||||    
T  25787453 aatatatgaaatgaagtattaaatgattaaggatattataggaaaaggataaattgttgtatcaaaagta 25787522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 1259669 - 1259621
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||  ||||||| |||||||||||||| |||||||    
T  1259669 tcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggag 1259621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 3363787 - 3363835
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| ||||||||   ||||||||||||||||||||    
T  3363787 tcttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaggaacggag 3363835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13965810 - 13965858
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||  | ||||||||||||||||||||    
T  13965810 tcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 13965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 15893620 - 15893572
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||  ||||||| | ||||||||||||||||||||    
T  15893620 tcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 15893572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 26342783 - 26342831
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||  | ||||||||||||||||||||    
T  26342783 tcttggtttgtgtaaaatgtcaaaacgtgacaattaaaaaggaacggag 26342831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 30264642 - 30264594
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||| | ||||||||||||||||||||    
T  30264642 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 30264594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 41885828 - 41885876
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||| ||||||||||||||    
T  41885828 tcttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaaggaacggag 41885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 43077495 - 43077543
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| || |||| || ||||||||||||||||||||    
T  43077495 tcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggag 43077543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 45317758 - 45317910
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  45317758 gagagagaaaaatatatgaaatatgataataaataatcaaggatattataggcaaaacataagttattgtatcaaaagtagtgaaatacatttagtgtct 45317857  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    || |||||||||||||||||||| | |||||||||||||||||| | ||||||    
T  45317858 tggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggcgggagtat 45317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 40608157 - 40608296
Alignment:
Q  18 atatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaa 117  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||| |||||||| |    
T  40608157 atatgaaatatgatattaaataattaaggatattataggcaaaacataagttattgtatcaaaaatagtgaaatacatttagtatattggtttgtgtaga 40608256  T
Q  118 aagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    |||||||||| | |||||||||||| ||||| ||||||||    
T  40608257 aagtcaaaatgtgacaattaaaaagcaacggtgagagtat 40608296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 13132249 - 13132101
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||    
T  13132249 agagagagaaatataggaaatatgatattaaataattaaggatattataggcaaaacataagttattgcatcaaaagtagtgaaatacatttagtgtctt 13132150  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | ||||||||||||||||||  || |||||||||||||||| ||| |||||    
T  13132149 ggtttgtgtaaaaagtcaaa--atgacaattaaaaaggaacagagggagta 13132101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 40602881 - 40602750
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||| ||||| | | | |    
T  40602881 aatatatgaaatataatattaaataattaaggatattataggtaaaatataaattattatataaaaagtagtgaaatacatttaatgtcttggtatatat 40602782  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    | ||||||||||||||||||||||||| ||||    
T  40602781 agaaagtcaaaatataacaattaaaaaagaac 40602750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 6661060 - 6661199
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||| |||| | ||||||| |||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||| ||||| | | ||    
T  6661060 agagagaaaaataaaagaaatatgatattaaataattaaagatattataggcaaaccataagttattgtatcaaaagtagtgaaatatatttagtgtgtt 6661159  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
    | |||||||||||||||||||| | |||||||||||||||    
T  6661160 ggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaa 6661199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 6741462 - 6741601
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||| |||| | ||||||| |||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||| ||||| | | ||    
T  6741462 agagagaaaaataaaagaaatatgatattaaataattaaagatattataggcaaaccataagttattgtatcaaaagtagtgaaatatatttagtgtgtt 6741561  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
    | |||||||||||||||||||| | |||||||||||||||    
T  6741562 ggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaa 6741601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 30205580 - 30205713
Alignment:
Q  23 aaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtc 122  Q
    |||||| |||||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||    
T  30205580 aaatatgatattaaataattaaggatattatagacaaaccataaattattgtatcaaaagtagtgaaatacatttagtgtcttggtttgtgtaaaaaatc 30205679  T
Q  123 aaaatataacaattaaaaaggaacggagagagtat 157  Q
    ||||| | |||||| ||||||||||||| ||||||    
T  30205680 aaaatgtgacaatt-aaaaggaacggagggagtat 30205713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 31760160 - 31760008
Alignment:
Q  6 agagagaagaatatatgaaata---taatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatat 102  Q
    |||||||| ||||||| |||||   | |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||   |    
T  31760160 agagagaaaaatatataaaatagtatgatattaaataattaaggatattatagtcaaaacataagttattgtatcaaaaatagtgaaatacattta--gt 31760063  T
Q  103 cttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    |||  ||| |||| ||||||||| ||| |||||||||||||||||||| ||||||    
T  31760062 cttagtttatgtagaaagtcaaagtatgacaattaaaaaggaacggagggagtat 31760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 18842660 - 18842780
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||||||  |||||| || ||||||||||||||||||| | ||  ||| | ||||||||||||||||||| |||||||| |    
T  18842660 atattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagtaacatttattgattatcttgatttgtgtaaaatgtcaaaatgt 18842759  T
Q  130 aacaattaaaaaggaacggag 150  Q
     ||||||||||||||||||||    
T  18842760 gacaattaaaaaggaacggag 18842780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 18291579 - 18291714
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  ||||  |||||||  ||| ||||| |||||| |||||||||||| | |  |||| | ||||||||||| |||    
T  18291579 aatatatgaaatgaaatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttgatttttgt 18291678  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  18291679 aaaatgtcaaaatgtgacaattaaaaaggaacggag 18291714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 9301667 - 9301533
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| || |||| ||||||||| ||||||| | || ||| |||||||||||| ||| | |||| |||||||| |||||||    
T  9301667 aatatatgaaatgagatattaaatgatgaaggttattataggaaaaatatgaattgttgcatcaaaagtagtaaaaaatatttgatatcttggtttgtgt 9301568  T
Q  115 aaaaag-tcaaaatataacaattaaaaaggaacgga 149  Q
    |||||  ||||||  | |||||||||||||||||||    
T  9301567 aaaaaactcaaaag-tgacaattaaaaaggaacgga 9301533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 15596460 - 15596595
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  |||| ||||||||  ||| ||||| |||||| || ||||||| | | |   ||| | ||||||| |||||||    
T  15596460 aatatatgaaataagatattaaatgaataaggttattatagtaaaagtataacttattgcataaaaagtaataacaattattgattatcttggtttgtgt 15596559  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  15596560 aaaatgtcaaaatgtgacaattaaaaaggaacggag 15596595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 17074714 - 17074571
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| |||||||| |||   |||||||||||  |||| ||||||||  |||||| || |||||| |||||||||||  | ||  ||| | | |||||    
T  17074714 gagagaaaaatatatgtaatgagatattaaataaataaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttg 17074615  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
     ||||||||||| || ||||| | ||||||||||||||||||||    
T  17074614 gtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 17074571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 17573556 - 17573699
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| |||||||| |||   |||||||||||  |||| ||||||||  |||||| || |||||| |||||||||||  | ||  ||| | | |||||    
T  17573556 gagagaaaaatatatgtaatgagatattaaataaataaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttg 17573655  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
     ||||||||||| || ||||| | ||||||||||||||||||||    
T  17573656 gtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 17573699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 8554122 - 8554008
Alignment:
Q  33 ttaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataac 132  Q
    ||||||||  |||| ||||||||  |||||| || ||||||||||||||||||  | ||  ||| | | ||||||||||||||||| |||||||| | ||    
T  8554122 ttaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatgtcaaaatgtgac 8554023  T
Q  133 aattaaaaaggaacg 147  Q
    |||| ||||||||||    
T  8554022 aattgaaaaggaacg 8554008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 10180486 - 10180620
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| || || |||||| |||||||||||| | |  |||| | ||||||||||| |||    
T  10180486 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttgatttatgt 10180585  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||| |||||||||| |||||||||||| ||||||    
T  10180586 aaaatgtcaaaatatgacaattaaaaagaaacgga 10180620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 2888577 - 2888457
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||| ||  |||||| || ||||||||||||||||||  | ||  ||| | | ||||| ||||||||||| || ||||| |    
T  2888577 atattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgt 2888478  T
Q  130 aacaattaaaaaggaacggag 150  Q
     ||||||||||||||||||||    
T  2888477 gacaattaaaaaggaacggag 2888457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 14061282 - 14061138
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||| || |||| ||||||||||| |  || | ||||||||  ||| ||||| ||||||||||||||||||| | ||  ||| | | ||||    
T  14061282 agagagagaaataaataaaatgtaatattaaatgactaaagctattatagtaaaagtataaattattgtatcaaaagtagtaatatttattgattgtctt 14061183  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    | ||||||||||| || ||||  | ||||||||||||||||||||    
T  14061182 ggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 14061138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 27911741 - 27911661
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | ||||||||||||||||| ||||||| |||||| ||||||||| ||||||    
T  27911741 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggag 27911661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 27958160 - 27958080
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | ||||||||||||||||| ||||||| |||||| ||||||||| ||||||    
T  27958160 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggag 27958080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 11994084 - 11994131
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||    
T  11994084 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 11994131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 12248894 - 12248759
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||| ||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| ||||| || ||||    
T  12248894 aatatataaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcgtgt 12248795  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||  |  |||||||||||||||||||    
T  12248794 aaaatgtcaaaaactgtcaattaaaaaggaacggag 12248759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 12342738 - 12342607
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| || || |||||| |||||||||||| | |  |||| | ||||||| ||| |||    
T  12342738 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgt 12342639  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    |||| |||||||||| ||||||||||||||||    
T  12342638 aaaatgtcaaaatatgacaattaaaaaggaac 12342607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 26062908 - 26062958
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||| ||||    
T  26062908 tatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggag 26062958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 35029716 - 35029797
Alignment:
Q  69 tattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||||||| ||  ||  | ||| ||||||||| ||||| || |||| || ||||||||||||||||||||    
T  35029716 tattgtatcaaaagtagtgatatttatggattatattgatttgtataaaatgttaaaaaatgacaattaaaaaggaacggag 35029797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 38074383 - 38074496
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||   ||||||||| | ||||  ||||||||| |||| | || || |||||||||||||||| ||||| ||||  | ||||    
T  38074383 agagagataaatatatgaaatgagatattaaatgagcaagattattataggaaaaagaaaaattgttgtatcaaaagtagtaaaatatatttgttgtctt 38074482  T
Q  106 gatttgtgtaaaaa 119  Q
    ||||||| ||||||    
T  38074483 gatttgtataaaaa 38074496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 8453313 - 8453225
Alignment:
Q  62 tataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||| |||||||||||| | |   ||| | ||||||  ||||||||||| |||||||| | ||||||||||||||||||||    
T  8453313 tataatttattgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 8453225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 13328179 - 13328227
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    ||||||||||| |||||||| | ||||||||||||||||||||| ||||    
T  13328179 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 13328227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 35052256 - 35052304
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  35052256 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 35052304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 38128584 - 38128536
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||||||||    
T  38128584 tcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggag 38128536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 29126009 - 29126159
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||  | |||||||| || |||| ||| ||||| |||| |||| || |||||||||||||||| |||   ||||  | ||||    
T  29126009 agagagagaaatatatgaaatgaagtattaaatgattaaggttatcataggaaaaagataaattgttgtatcaaaagtagt-aaaagtatttgttgtctt 29126107  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | |||||||||||||  ||||| | ||| | |||||||||| ||| ||||||    
T  29126108 ggtttgtgtaaaaagctaaaatgtgacagtgaaaaaggaacagagggagtat 29126159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 43553155 - 43553226
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    ||||||||||||  |||||||||| |  |||||||||||||  ||| ||| | |||||||||||||||||||    
T  43553155 aatatatgaaatgaaatattaaatgaataaggatattatagtaaaagtatcaattattgtatcaaaagtagt 43553226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 25703617 - 25703567
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| |||||||| | |||||||||||| |||||||    
T  25703617 tatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggag 25703567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 25812788 - 25812738
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| |||||||| | |||||||||||| |||||||    
T  25812788 tatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggag 25812738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 41643566 - 41643472
Alignment:
Q  63 ataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    |||| ||||| ||||||||||||| | ||  ||| | | | ||| ||||||||||| ||||||| || ||||||||||| ||||||||| |||||    
T  41643566 ataatttattatatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaattacaattaaaaatgaacggagatagtat 41643472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 33935097 - 33935052
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||| ||||||||||| |||||||| | |||||||||||||||||    
T  33935097 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacg 33935052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 39303553 - 39303504
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataac-aattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | || ||||||||||||||||||    
T  39303553 tcttgatttgtgtaaaatgtcaaaatgtgacaaattaaaaaggaacggag 39303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 4057491 - 4057535
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  4057491 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 4057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 14228359 - 14228311
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||| ||||||||    
T  14228359 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggag 14228311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 14263747 - 14263795
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||| ||||||||    
T  14263747 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggag 14263795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 23855688 - 23855808
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||||||  ||| ||| |  |||||||||||||||||| | ||  ||| | | | ||| ||| ||||||| ||||||| ||    
T  23855688 atattaaataaataaggttattatagtaaaagtatgacgtattgtatcaaaagtagtaatatttattgattgtattggtttatgtaaaatgtcaaaaaat 23855787  T
Q  130 aacaattaaaaaggaacggag 150  Q
     || |||||||||||||||||    
T  23855788 gacgattaaaaaggaacggag 23855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 36058401 - 36058489
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||||| |||||||||||| | |  |||| | ||| || |||| ||||||| ||||||||   ||||||||||||||||||||| ||||    
T  36058401 ttattgcatcaaaagtagtaacaatcattgactattttaatttatgtaaaatgtcaaaatgcgacaattaaaaaggaacggagatagta 36058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 38482829 - 38482781
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||  ||||||| | ||||||||||||||||||||    
T  38482829 tcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 38482781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 39663937 - 39664021
Alignment:
Q  58 aaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaag 142  Q
    |||| |||| ||||| ||||||||||| | | ||  ||||| | || ||||||||||||| ||||||||  ||||||||||||||    
T  39663937 aaaagataaattattctatcaaaagtaataatatttatttattgtcatgatttgtgtaaagagtcaaaaagtaacaattaaaaag 39664021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 8e-53; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 38009901 - 38009756
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| | |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  38009901 gagagagaaaagtatatgaaatatgatattaaataatcaatgatattataggcaaaacataagttattgtatcaaaagtagtgaaatacatttagtgtct 38009802  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    || |||||||||||||||||||| | ||||||||||||||||||||    
T  38009801 tggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggag 38009756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 8457045 - 8456895
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  8457045 agagagagaaatatatgaaatatgatattaaataattaaggatattataggcaaaacataagttattgtatcaaaagtagtgaaatacatttagtgtctt 8456946  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | |||||||| ||||||||||| | |||||||||||||||||||| |||||    
T  8456945 ggtttgtgtagaaagtcaaaatgtgacaattaaaaaggaacggagggagta 8456895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 34603734 - 34603884
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||    
T  34603734 agagagagaaatatatgaaatatgatattaaataattaaggatattataggcaaaacacaagttattgtatcaaatgtagtgaaatacatttagtgtctt 34603833  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||||||||||||| ||||||| | |||||||||||||||| ||| |||||    
T  34603834 gatttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacagagggagta 34603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 1391305 - 1391154
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||| ||||| || |||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1391305 agagagagaaatatgtgaaaaatgatattaaataattaaggatattatacgtaaaacataagttattgtatcaaaagtagtgaaatacatttagtatctt 1391206  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | |||||||||||||||||||  | |||| ||||||||||||||||||||||    
T  1391205 ggtttgtgtaaaaagtcaaaaagtgacaaataaaaaggaacggagagagtat 1391154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 48087808 - 48087948
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||| |||||||||||||| |||||||||||| || |||||| ||||||||| | |||||||||||||||| ||||||||||||||||| | ||||    
T  48087808 agagagaaaaatatatgaaatatgatattaaataattaaagatattgtaggcaaaacacaagttattgtatcaaatgtagtgaaatacatttagtgtctt 48087907  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    | |||||||||||| ||||||| | ||||||||||||||||    
T  48087908 ggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaac 48087948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 14949218 - 14949067
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | | ||    
T  14949218 agagagagaaatataagaaatatgatattaaataattaaggatattataggcaaaccataagttattgtatcaaaagtagtgaaatacatttagtgtatt 14949119  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | ||||||||||| |||||||| |  |||||||||||||||| || ||||||    
T  14949118 ggtttgtgtaaaacgtcaaaatgtggcaattaaaaaggaacgaagtgagtat 14949067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 14090350 - 14090500
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||    
T  14090350 agagagagaaatatatgaaatatgatattaaataattaaggatattataggcaaaacacaagttattgtatcaaatgtagtgaaatacatttagtgtctt 14090449  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
      |||||||||||| ||||||| | ||||||||||| |||| ||| |||||    
T  14090450 agtttgtgtaaaaaatcaaaatgtgacaattaaaaaagaacagagggagta 14090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 18091352 - 18091502
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| ||||||||||||   |||| ||||||||||| |||||||||||||||||||||||| | ||||    
T  18091352 agagagagaaatatatgaaatatgatattaaataattaaggatattataattaaaacataagttattgcatcaaaagtagtgaaatacatttagtgtctt 18091451  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | |||||||| ||||||||||| | ||||||||||| |||||||| |||||    
T  18091452 ggtttgtgtataaagtcaaaatgtgacaattaaaaaagaacggagggagta 18091502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 26916046 - 26916188
Alignment:
Q  18 atatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaa 117  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| | ||||| |||||||| |    
T  26916046 atatgaaatatgatattaaataattaaggatattatagacaaaacataagttattgtatcaaaagtagtgaaatatatttagtgtcttggtttgtgtaga 26916145  T
Q  118 aagtcaaaatataacaatt-aaaaaggaacggagagagtatga 159  Q
    |||| ||||| |||| ||| |||||||||||||| ||||||||    
T  26916146 aagttaaaatgtaacgattaaaaaaggaacggagggagtatga 26916188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 30151656 - 30151537
Alignment:
Q  34 taaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataaca 133  Q
    |||||||| ||||||||||| || |||| |||||||||| ||||||||||| ||||||||||||| |||||| |||| |||| ||||||||||| | | |    
T  30151656 taaataattaaggatattattggtaaaacataagttattatatcaaaagtaatgaaatacatttagtatcttaatttatgtagaaagtcaaaatgtgata 30151557  T
Q  134 attaaaaaggaacggagaga 153  Q
    ||||||||||||||||||||    
T  30151556 attaaaaaggaacggagaga 30151537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 52061669 - 52061812
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| |||||||||||||  ||||||||| |  || |  |||||||  ||| ||||| |||||| |||||||||||| | |   ||| | | |||||    
T  52061669 gagagaaaaatatatgaaataagatattaaatgaataaagtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatgattgattgtcttg 52061768  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  52061769 atttgtgtaaaatgtcaaaatatgacaattaaaaaggaacggag 52061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 56499747 - 56499610
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| ||||||||||||   ||||||||| || | || ||||||||| |||| |||| || ||||||||||| |||| ||||  ||||  | |||    
T  56499747 gagagagaaaaatatatgaaatgagatattaaatgattagggctattataggaaaaagataaattgttgtatcaaaaatagtaaaatgtatttgttgtct 56499648  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaag 142  Q
    || |||||||||||||||||||  | ||||||||||||    
T  56499647 tggtttgtgtaaaaagtcaaaaggtgacaattaaaaag 56499610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 1181035 - 1180884
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||   ||||||||| |  |||| ||||||||| |||| | || || |||||||||||||||| |||| |||||  | ||||    
T  1181035 agagagagaaatatatgaaatgagatattaaatgagaaaggttattataggaaaaagaaaaattgttgtatcaaaagtagtaaaatgcatttgttgtctt 1180936  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | ||||||||||||  | |||  | |||||||||||||||||||| ||||||    
T  1180935 ggtttgtgtaaaaaacctaaaagtgacaattaaaaaggaacggagggagtat 1180884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 23719909 - 23719774
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||   |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| ||||  ||| |||    
T  23719909 aatatatgaaaagaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttagtttatgt 23719810  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| ||||||| |||||||||||||||||||||||    
T  23719809 aaaatgtcaaaaaataacaattaaaaaggaacggag 23719774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 48509994 - 48509865
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  | |||||||| || ||| |||||||||  |||  |||| || |||||||||||||||| ||| | ||||  | ||||||||| |||    
T  48509994 aatatatgaaatgaagtattaaatgattaagaatattatagaaaaatgataaatttttgtatcaaaagtagtaaaa-atatttgttgtcttgatttatgt 48509896  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaa 145  Q
    ||||||||||||| | |||||||||||||||    
T  48509895 aaaaagtcaaaatgtgacaattaaaaaggaa 48509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 38866037 - 38866149
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    ||||||||| || |||| ||||||||  |||| |||| || ||| |||||||||||| |||||  |||  | |||| |||| ||||||||||||||||||    
T  38866037 atattaaatgattaaggttattatagaaaaaagataaattgttgcatcaaaagtagtaaaata--tttgttgtcttaatttatgtaaaaagtcaaaatat 38866134  T
Q  130 aacaattaaaaagga 144  Q
     ||||||||||||||    
T  38866135 gacaattaaaaagga 38866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 39309041 - 39309179
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||  | |||||||| || |||| ||||||||| |||| |||| ||||| ||| |||||| || |||   ||||  ||||||    
T  39309041 agagagagaaatatatgaaatgaagtattaaattattaaggttattataggaaaaagataaattattatattaaaagtggtaaaagt-atttgttatctt 39309139  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
      ||| |||||||||||||||||| |||||||||||||||    
T  39309140 agtttatgtaaaaagtcaaaatatgacaattaaaaaggaa 39309179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 54231692 - 54231793
Alignment:
Q  49 attataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgg 148  Q
    |||||||  ||| ||||| |||||| |||||||||||| | |   ||| | | ||||||||||||||||| ||||||| || ||||||||||||||||||    
T  54231692 attatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacgg 54231791  T
Q  149 ag 150  Q
    ||    
T  54231792 ag 54231793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 30939361 - 30939409
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  30939361 tcttggtttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggag 30939409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 33751375 - 33751327
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  33751375 tttgtgtaaaatgtcaaaatgtaacaattaaaaaggaacggagatagta 33751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 19093286 - 19093143
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    |||||| |||||||||||||   ||||||||| |  ||||  |||||||  ||| || || |||||| |||||||||||| | |   ||| | |||||||    
T  19093286 gagagaggaatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaattattgactatcttg 19093187  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
     ||| ||||||| |||||||| | ||||||||||||||||||||    
T  19093186 gtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 19093143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 37502141 - 37502212
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    |||||||||||| ||||||||||| |  |||| ||||||||  ||| ||||| |||||||||||||||||||    
T  37502141 aatatatgaaatgtaatattaaatgaataaggttattatagtaaaagtataaattattgtatcaaaagtagt 37502212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 47596723 - 47596604
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    ||||||||| |  |||| |||||| || |||  |||| ||||||||||||||||||| | ||  ||| | | | ||| ||||||||||| ||||||| ||    
T  47596723 atattaaatgaataaggttattattggaaaaggataatttattgtatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaat 47596624  T
Q  130 aacaattaaaaaggaacgga 149  Q
     |||||||||||||||||||    
T  47596623 gacaattaaaaaggaacgga 47596604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 56576144 - 56576094
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  56576144 tatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaacggag 56576094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 19527260 - 19527203
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||| |||| ||||||    
T  19527260 tatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaaaggagggagtat 19527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 31862018 - 31861969
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    |||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  31862018 tttgtgtaaaatttcaaaaaataacaattaaaaaggaacggagatagtat 31861969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 5374388 - 5374340
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||||    
T  5374388 tcttgatttgtataaaatgtcaaaatatgacaattaaaaagaaacggag 5374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 9834486 - 9834534
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  9834486 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 9834534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 12252298 - 12252346
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||||||    
T  12252298 tcttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaacggag 12252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 22828439 - 22828391
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  22828439 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 22828391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 35231896 - 35231944
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  35231896 tcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 35231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 36659465 - 36659417
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||||||    
T  36659465 tcttgatttgtgtaaaatgtcaaaaaatgacaattaagaaggaacggag 36659417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 43086522 - 43086653
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||   |||||||||| || |||| ||||||||| |||| |||| || |||||||||||||| | ||||  | ||  |||||| ||||||||    
T  43086522 aatatatgaaaagaaatattaaatgatgaaggttattataggaaaaagataaattgttgtatcaaaagtaataaaatgtaatttttatcttaatttgtgt 43086621  T
Q  115 aaaaag-tcaaaatataacaattaaaaaggaac 146  Q
    |||||  ||||||  | ||||||||||||||||    
T  43086622 aaaaaactcaaaag-tgacaattaaaaaggaac 43086653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 44013951 - 44013903
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  44013951 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 44013903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 44217912 - 44217960
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  44217912 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 44217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 354085 - 354220
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| || || |||||| ||||||| |||| | |  |||| | ||||||| ||| |||    
T  354085 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaaatagtaacaatcattgactatcttggtttatgt 354184  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  354185 aaaatgtcaaaatgtgacaattaaaaaggaacggag 354220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 17698666 - 17698713
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||| ||| ||||||| |||||||||| |||||||||||||||||    
T  17698666 tatcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacg 17698713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 45725703 - 45725790
Alignment:
Q  63 ataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| ||||||||||||||||||| | ||  ||| | | | ||  ||||||||||| ||||||| || ||||||||||||||||||||    
T  45725703 ataatttattgtatcaaaagtagtaacatttattgactttatttgtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 45725790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 51654981 - 51654867
Alignment:
Q  31 tattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatata 130  Q
    |||||||| || |||| ||||| ||  |||| |||| || |||||||||||||||  |||   ||||| ||| ||| |||||||||||||||||||| |     
T  51654981 tattaaattattaaggttattacagtaaaaagataaattgttgtatcaaaagtagaaaaagt-atttattattttggtttgtgtaaaaagtcaaaatgtg 51654883  T
Q  131 acaattaaaaaggaac 146  Q
    || |||||||||||||    
T  51654882 acgattaaaaaggaac 51654867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 55703136 - 55703175
Alignment:
Q  112 tgtaaaaagtcaaaatataacaattaaaaaggaacggaga 151  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  55703136 tgtaaaatgtcaaaatatgacaattaaaaaggaacggaga 55703175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 3036592 - 3036637
Alignment:
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||| ||||||| || ||||||| ||||||||||||||||||||    
T  3036592 tgatttatgtaaaatgtaaaaatatgacaattaaaaaggaacggag 3036637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 23237842 - 23237883
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||| || ||||| |||||||||||||||||||||    
T  23237842 tttgtgtaaaatgttaaaatgtaacaattaaaaaggaacgga 23237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 36408969 - 36409006
Alignment:
Q  113 gtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  36408969 gtaaaatgtcaaaatatgacaattaaaaaggaacggag 36409006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 36423135 - 36423172
Alignment:
Q  113 gtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  36423135 gtaaaatgtcaaaatatgacaattaaaaaggaacggag 36423172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 47428723 - 47428772
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||| |||||||  ||||||| | |||||||||||||||||||    
T  47428723 tatcttgatttatgtaaaatatcaaaatgtgacaattaaaaaggaacgga 47428772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 48782403 - 48782452
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||| ||||||||||| |||||||| | ||||||||||| |||||||    
T  48782403 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacgga 48782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 55430347 - 55430302
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
    ||||||| |||||||||||||| ||||| | |||||||||||||||    
T  55430347 tatcttggtttgtgtaaaaagtaaaaatgtgacaattaaaaaggaa 55430302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 8735595 - 8735643
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||  ||||||| | ||||||||||||||||||||    
T  8735595 tcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 8735643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 13629231 - 13629187
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  13629231 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 13629187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 26933905 - 26933826
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    |||||||  ||||||||||||  ||||||||| ||| |||||||||||||  ||| ||| | ||||||| |||||||||||    
T  26933905 agagagagaaatatatgaaatgaaatattaaagaat-aaggatattatagtaaaagtatcaattattgtgtcaaaagtagt 26933826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 44069237 - 44069285
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | |||||||||||| |||||||    
T  44069237 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggag 44069285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 53599824 - 53599776
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| || ||||| | ||||||||||||||||||||    
T  53599824 tcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 53599776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 36481180 - 36481317
Alignment:
Q  22 gaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagt 121  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  36481180 gaaatataatattaaataattaaggatattataggcaaaccataagttattgtatcaaaagtagtgaaatacatttaatgttttggtttgtgtaaaaagt 36481279  T
Q  122 caaaatataacaattaaaaaggaacggagagagtatga 159  Q
    |||||||| | |||||||||||||||||| ||||||||    
T  36481280 caaaatatgataattaaaaaggaacggagggagtatga 36481317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 13957290 - 13957150
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  13957290 agagagaagagtatatgaaatatgatattaaataatcaaggatattataggcaaaacataagttattgtatcaaaagtagtgaaatacatttagtgtctt 13957191  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    | ||| |||||||||||||||| | ||||||||||| ||||    
T  13957190 ggtttatgtaaaaagtcaaaatgtgacaattaaaaaagaac 13957150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 4440187 - 4440318
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||| |||||| |||||||||||| || |||||||||||||||| |||| ||||||||||||||||||| ||||||||||| | ||||| |||||||    
T  4440187 aatatataaaatatgatattaaataattaaagatattataggcaaaacataaattattgtatcaaaagtagtaaaatacatttagtgtcttggtttgtgt 4440286  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||||| ||||||| ||||||||||||||||    
T  4440287 aaaaagttaaaatatgacaattaaaaaggaac 4440318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 8849242 - 8849118
Alignment:
Q  31 tattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatata 130  Q
    |||||||| || |||| ||||||||  |||| |||| || |||||||||||||||| |||   ||||  | || |||||||||||||||||||||||       
T  8849242 tattaaatgattaaggttattatagaaaaaagataattttttgtatcaaaagtagtaaaagt-atttgttgtcatgatttgtgtaaaaagtcaaaatgag 8849144  T
Q  131 acaattaaaaaggaacggagagagta 156  Q
    |||||||||||||||| |||||||||    
T  8849143 acaattaaaaaggaacagagagagta 8849118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 36239556 - 36239697
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  ||||  |||||||  ||||||||| |||||| |||||||||||| | |   ||| | | ||||||| |||||    
T  36239556 aatatatgaaataagatattaaattaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttgatatgtgt 36239655  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||| |||||||| | ||||||||||| ||||||||| ||||    
T  36239656 aaaatgtcaaaatgtgacaattaaaaatgaacggagatagta 36239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 4985296 - 4985161
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  ||||  |||||||  ||||||||| |||||| |||||||||||| | |   ||| | | ||||| | |||||    
T  4985296 aatatatgaaataagatattaaatgaataaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttggtatgtgt 4985197  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  4985196 aaaatgtcaaaatgtgacaattaaaaaggaacggag 4985161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 18676544 - 18676400
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||||  |||||||||||  ||||||||| || |||| ||||||||| |||| || | || |||||||||||||||| |||   ||||  | |||    
T  18676544 gagagagaag--tatatgaaataggatattaaatgatgaaggttattataggaaaaagatgaattgttgtatcaaaagtagtaaaaagtatttgttgtct 18676447  T
Q  105 tgatttgtgtaaaaag--tcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||   ||||||  | ||||||||||||||||||||    
T  18676446 tgatttgtgtaaaaaaattcaaaag-tgacaattaaaaaggaacggag 18676400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 7408421 - 7408561
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| ||||||||||||   ||||||||| |  |||| ||||||||  ||| ||||| ||||||||||||||||| | |  |  ||| | | | |||    
T  7408421 gagagaaaaatatatgaaatgagatattaaatgaataaggttattatagtaaaagtataaattattgtatcaaaagtattaatgtttattgattgttttg 7408520  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
     ||||||||||| ||||||| || |||||||||||||||||    
T  7408521 gtttgtgtaaaatgtcaaaagatgacaattaaaaaggaacg 7408561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 3892997 - 3893044
Alignment:
Q  103 cttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  3892997 cttgatttgtgtaaaatgtcaaaaaataacaattaaaaagaaacggag 3893044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 4175601 - 4175466
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  |||| ||||||||  ||| ||||  |||||||||||||||||||   |    |||| | ||||| |||||||    
T  4175601 aatatatgaaatgagatattaaatgaataaggttattatagtaaaagtatagcttattgtatcaaaagtagtatcaattgtttattgtcttgctttgtgt 4175502  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  4175501 aaaatgtcaaaatgtgacaattaaaaaggaacggag 4175466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 9958951 - 9958872
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||||||||||||||||| ||  ||| ||| | ||||||||||||||  ||||||| || ||||||||||| |||||    
T  9958951 ttattgtatcaaaagtagtgacatttattgaatgtattgatttgtgtaaattgtcaaaaaatgacaattaaaaatgaacg 9958872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 16124381 - 16124246
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  |||||| || |||||| |||||||||||| | |  |||| | ||| ||| ||| |||    
T  16124381 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaaatacaacttattgcatcaaaagtagtaacaatcattgactatattggtttatgt 16124282  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  16124281 aaaatgtcaaaatgtgacaattaaaaaggaacggag 16124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 38910456 - 38910506
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  38910456 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 38910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 40927242 - 40927391
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||| ||||  | |||||||| || |||  ||||||||| |||| |||| || ||| |||||||||||| |||   ||||  | ||||    
T  40927242 agagagagcaatatataaaatgaagtattaaatgattaagattattataggaaaaagataaattgttgcatcaaaagtagtaaaagt-atttgttgtctt 40927340  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
     ||||||||||||| ||||||  | |||||||||||||||| |||||||||    
T  40927341 aatttgtgtaaaaaatcaaaacgtgacaattaaaaaggaacagagagagta 40927391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 6689786 - 6689831
Alignment:
Q  104 ttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||||||| || |||| ||||||||||||||||||||||    
T  6689786 ttgatttgtgtaaaatgtaaaaaaataacaattaaaaaggaacgga 6689831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 21606379 - 21606318
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtat 76  Q
    ||||||||||||| |||||||||| |  |||||||||||||  ||||||||| |||||||||    
T  21606379 aatatatgaaataaaatattaaatgaataaggatattatagtaaaaatataaattattgtat 21606318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 28024346 - 28024245
Alignment:
Q  49 attataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgg 148  Q
    |||||||  ||| ||||| |||||| |||||||||||| | |   ||| | | ||||| || |||||||| |||||||||| ||||||||||||||||||    
T  28024346 attatagtaaaagtataacttattgcatcaaaagtagtaataattattgattgtcttggttggtgtaaaatgtcaaaatatgacaattaaaaaggaacgg 28024247  T
Q  149 ag 150  Q
    ||    
T  28024246 ag 28024245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 2674012 - 2673964
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  2674012 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 2673964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 3243886 - 3244026
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| ||||||| ||||   ||||||||| |  |||| ||||||||| |||| | || ||||||||| |||| |||| | ||  ||| | | |||||    
T  3243886 gagagaaaaatatataaaatgagatattaaatgaataaggctattataggaaaaacaaaaattattgtataaaaaatagtaacatttattaattgtcttg 3243985  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    |||| ||||||| ||||||| || ||||||||||| |||||    
T  3243986 atttatgtaaaatgtcaaaaaatgacaattaaaaatgaacg 3244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 8825242 - 8825290
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | | ||||||||||||||||||    
T  8825242 tcttgatttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggag 8825290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 11413636 - 11413509
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt-aaaaagtcaaaata 128  Q
    ||||||||| || |||| ||||||||| |||| || | || |||||||||||||||| |||   ||||  | ||||| ||||||| ||||| |||||| |    
T  11413636 atattaaatgatgaaggttattataggaaaaagatgaattgttgtatcaaaagtagtaaaaagtatttgttgtcttggtttgtgtaaaaaactcaaaa-a 11413538  T
Q  129 taacaattaaaaaggaacggagagagtat 157  Q
    | | ||||||||||||||||||| |||||    
T  11413537 tgataattaaaaaggaacggagaaagtat 11413509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 12665043 - 12665091
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||||| ||||||||||||||||||||    
T  12665043 tcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacggag 12665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 21157733 - 21157872
Alignment:
Q  17 tatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaa 116  Q
    |||||||||||  ||||||||| || |||| | ||||||  |||| || | || |||||||||||||||| ||||  ||||  | ||||| |||||||||    
T  21157733 tatatgaaataagatattaaatgatgaaggtttttatagaaaaaagatgaattgttgtatcaaaagtagtaaaatgtatttgttgtcttggtttgtgtaa 21157832  T
Q  117 aaag-tcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||  ||||||  | |||||||||||||||||||| |||||    
T  21157833 aaaactcaaaag-tgacaattaaaaaggaacggagggagta 21157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 25344145 - 25344193
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | |||||| | ||||||||||||||||||||    
T  25344145 tcttgatttgtgtaaaatgacaaaatgtgacaattaaaaaggaacggag 25344193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 28447072 - 28446964
Alignment:
Q  49 attataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgg 148  Q
    |||||||  ||| ||||| |||||||||||||| |||| | |   ||| | ||||||| ||||||||||| |||||||  | |||||||||||| |||||    
T  28447072 attatagtaaaagtataacttattgtatcaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaacgg 28446973  T
Q  149 agagagtat 157  Q
    ||| |||||    
T  28446972 agatagtat 28446964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 31803477 - 31803557
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | ||||||||||||||||| |||||||  | ||||||||||| ||||||||    
T  31803477 attgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggag 31803557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 6754213 - 6754166
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||| ||||||||||| |||||||| | |||||||||||||||||||    
T  6754213 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 6754166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 25785996 - 25786139
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||   ||||||||| |  |||| ||||||| | |||| | || || |||||||||||||||| |||| |||||  | ||||    
T  25785996 agagagagaaatatatgaaatgagatattaaatgaggaaggttattataagaaaaagaaaaattgttgtatcaaaagtagtaaaatgcatttggtgtctt 25786095  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    | ||||| |||||| || |||    |||||||||||||||||||    
T  25786096 ggtttgtataaaaaatctaaaagcgacaattaaaaaggaacgga 25786139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 26854131 - 26854084
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||| ||||||||||| |||||||| | |||||||||||||||||    
T  26854131 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacg 26854084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 4098516 - 4098570
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    ||||| ||||||||||| |||||||| | |||||||||||| |||||||| ||||    
T  4098516 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggagatagta 4098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 13703282 - 13703336
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||||||||||||||||  ||||||  | ||||||||||||||||||||| ||||    
T  13703282 tcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggagatagta 13703336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 18000523 - 18000565
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||| |||||||  ||||||||||||||||||||||    
T  18000523 tttgtgtaaaatgtcaaaaggtaacaattaaaaaggaacggag 18000565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 4017597 - 4017642
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
    ||||||||||||||||||| |||||||  | |||||||||||||||    
T  4017597 tatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 4017642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 9076256 - 9076301
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||| ||||||||||| |||||| ||| |||||||||||||||||    
T  9076256 tcttggtttgtgtaaaatgtcaaattatgacaattaaaaaggaacg 9076301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 25027694 - 25027625
Alignment:
Q  17 tatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    ||||||||||  |||||||||| |  |||||||||||||  ||| ||| | |||||||||||||||||||    
T  25027694 tatatgaaatgaaatattaaatgaataaggatattatagtaaaagtatcaattattgtatcaaaagtagt 25027625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 425309 - 425356
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||||||    
T  425309 tcttgatttgtgtaaaatgtcaaaa-atgacagttaaaaaggaacggag 425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 1795151 - 1795103
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||  ||||  ||||||||||||||||    
T  1795151 tcttgatttgtgtaaaatgtcaaaaagtaaccgttaaaaaggaacggag 1795103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 18794968 - 18795016
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||| | | | ||||||||||||||||||    
T  18794968 tcttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaaggaacggag 18795016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 21150592 - 21150731
Alignment:
Q  17 tatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaa 116  Q
    |||||||||||  ||||||||| || |||| | ||||||  |||| || | || |||||||||||||||| ||||  ||||  | ||||| |||||||||    
T  21150592 tatatgaaataagatattaaatgatgaaggtttttatagaaaaaagatgaattgttgtatcaaaagtagtaaaatgtatttgttgtcttggtttgtgtaa 21150691  T
Q  117 aaag-tcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||  ||||||  | ||| |||||||||||||||| |||||    
T  21150692 aaaactcaaaag-tgacagttaaaaaggaacggagggagta 21150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 34261497 - 34261541
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||||    
T  34261497 tcttggtttgtctaaaatgtcaaaatatgacaattaaaaaggaac 34261541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 39073229 - 39073277
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||||||||||  ||||||| | ||||||||||||||||||||    
T  39073229 tcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 39073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 35077494 - 35077644
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||    
T  35077494 agagagagaaatataggaaatatgatattaaataattaaggatattataggcaaaacataagttattgcatcaaaagtagtgaaatacatttagtgtctt 35077593  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | |||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  35077594 ggtttgtgtaaaaagtcaaaatatgacaattaaaaaggaacagagggagta 35077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 35458644 - 35458499
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||    
T  35458644 gagagagaaaaatatatgaaatatgatattaaataattaaggatattataggcaaaacataagttattgtatcaaaagtagtgaaatacaattagtgtct 35458545  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    || |||||||||||||| ||||| | |||||||||||| |||||||    
T  35458544 tggtttgtgtaaaaagttaaaatgtgacaattaaaaagaaacggag 35458499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 47843970 - 47843832
Alignment:
Q  18 atatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaa 117  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||| ||||||    
T  47843970 atatgaaatatgatattaaataattaaggatattataggcaaaacacaagttattgtatcaaatgtagtgaaatacatttagtgtcttgatttatgtaaa 47843871  T
Q  118 aagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    || ||||||| | |||||||||||||||| ||| |||||    
T  47843870 aaatcaaaatgtgacaattaaaaaggaacagagggagta 47843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 53290900 - 53290747
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| ||||||||||||| | ||  |||||||||||||||||||||||||||||||||||| | || |    
T  53290900 agagagagaaatataagaaatatgatattaaataattaaggatattatagacgaaccataagttattgtatcaaaagtagtgaaatacatttagtgtcat 53290801  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtatga 159  Q
    | |||||||||||| ||||||||| ||||||||||||||||||||  |||||||    
T  53290800 ggtttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggaggaagtatga 53290747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 28226541 - 28226666
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||         |||| |||| |||||||    
T  28226541 aatatatgaaatatgatattaaataattaaggatattataggcaaaacataagttattgtatcaaaagcagtga---------aataacttggtttgtgt 28226631  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||||||||| | |||||||||||||||||||    
T  28226632 aaaaagtcaaaatgtgacaattaaaaaggaacgga 28226666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 24569657 - 24569810
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaata----catttaata 101  Q
    ||||| || |||||||||||||| |||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||| |||||||     ||||| ||    
T  24569657 agagacaaaaatatatgaaatatgatattaaataattaagaatattataggcaaaacataacttattgtatcaaaagtaatgaaatatatttatttagta 24569756  T
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    || || ||| |||||||||||||||| ||||||||||||| |||| || ||||||    
T  24569757 tc-tggtttatgtaaaaagtcaaaatgtaacaattaaaaatgaacagatagagta 24569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 26748485 - 26748617
Alignment:
Q  31 tattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatata 130  Q
    |||||||| || |||| ||||||||  |||| |||| || |||||||||||||||| |||  |||||  | |||||||||||||||||||||||||| |     
T  26748485 tattaaattattaaggttattatagaaaaaagataaattgttgtatcaaaagtagtaaaag-catttgttgtcttgatttgtgtaaaaagtcaaaatgtg 26748583  T
Q  131 acaattaaaaaggaacggagagagtatgaaagag 164  Q
    ||||||||||||| || ||| |||||||| ||||    
T  26748584 acaattaaaaagggacagagggagtatgagagag 26748617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 33491269 - 33491134
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   |||||||||||  |||| ||||||||  ||| ||||| |||||| |||||||||||| | |  |||| | ||||||  ||| |||    
T  33491269 aatatatgaaatgagatattaaataaataaggttattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgt 33491170  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  33491169 aaaatgtcaaaatgtgacaattaaaaaggaacggag 33491134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 34750762 - 34750900
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  ||||||||||||  |  |||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| |||   ||||  | ||||    
T  34750762 agagagagaaatatatgaaatgaagcattaaataattaaggttattataggaaaaagataatttgttgtatcaaaagtagt-aaaagtatttgttgtctt 34750860  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaa 145  Q
    ||||||||||||||| ||||||   |||||||||||||||    
T  34750861 gatttgtgtaaaaagacaaaatgagacaattaaaaaggaa 34750900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 13158482 - 13158434
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  13158482 tcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggag 13158434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 35315335 - 35315383
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  35315335 tcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 35315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 40319043 - 40318923
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||| ||  |||||| || ||||||||||||||||||  | ||  ||| | ||||||| ||||||||||| || ||||| |    
T  40319043 atattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattatcttggtttgtgtaaaatgttaaaatgt 40318944  T
Q  130 aacaattaaaaaggaacggag 150  Q
     ||||||||||| ||||||||    
T  40318943 gacaattaaaaatgaacggag 40318923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 41425760 - 41425880
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||| ||  |||||| || ||||||||||||||||||  | ||  ||| | | ||||| ||||||||||| || ||||| |    
T  41425760 atattaaataaataaggttattaaagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgt 41425859  T
Q  130 aacaattaaaaaggaacggag 150  Q
     ||||||||||||||||||||    
T  41425860 gacaattaaaaaggaacggag 41425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 41351324 - 41351189
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||| ||||||||||||| | ||  ||| ||| ||||||||| |||    
T  41351324 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattatatcaaaagtagtaacattaattgaatgtcttgatttatgt 41351225  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||  ||| ||  | ||||||||||||||||||||    
T  41351224 aaaatatcagaaagtgacaattaaaaaggaacggag 41351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 49123723 - 49123773
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||||||    
T  49123723 tatcttgatttgtgtaaaatgtcaaaatgtgactattaaaaaggaacggag 49123773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 2642819 - 2642959
Alignment:
Q  16 atatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgta 115  Q
    ||||||||||||  ||||||||| || |||| |||||| || |||| || | || |||||||||||||||| |||   ||||  | ||||| ||||||||    
T  2642819 atatatgaaataagatattaaatgatgaaggttattattggaaaaagatgaattgttgtatcaaaagtagtaaaaagtatttgttgtcttggtttgtgta 2642918  T
Q  116 aaaag-tcaaaatataacaattaaaaaggaacggagagagta 156  Q
    ||||  ||||||  | |||||||||||||||||||| |||||    
T  2642919 aaaaactcaaaag-tgacaattaaaaaggaacggagggagta 2642959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 45513359 - 45513314
Alignment:
Q  104 ttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||    
T  45513359 ttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacgga 45513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 53745327 - 53745278
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||| ||||||||||| |||||||| | |||||||||||||||||||    
T  53745327 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 53745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 7678140 - 7678270
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaag--tcaaaat 127  Q
    ||||||||| || || | ||||||||| | || |||| || |||||| ||||||||| ||||  ||||  | ||||| ||||| ||||||   ||||||     
T  7678140 atattaaatgatgaaagttattataggaagaagataaattgttgtattaaaagtagtaaaatgtatttgttgtcttggtttgtataaaaaaactcaaaa- 7678238  T
Q  128 ataacaattaaaaaggaacggagagagtatga 159  Q
    |||||||||||||||||||||| |||||||||    
T  7678239 ataacaattaaaaaggaacggatagagtatga 7678270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 20848799 - 20848719
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | ||| ||| ||||||||||| |||||||| | ||| ||||||||||||||||    
T  20848799 attgtatcaaaagtagtaacatttattgattattttggtttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggag 20848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 29698194 - 29698242
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  29698194 tcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 29698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 33874621 - 33874541
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | | ||| ||||||||||| ||||||| || ||||||||||||||||||||    
T  33874621 attgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 33874541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 45101401 - 45101353
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  45101401 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 45101353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 54106466 - 54106514
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||| ||||||||||||||||||||||    
T  54106466 tcttggtttatgtaaaatgtcaaaatgtaacaattaaaaaggaacggag 54106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 43775520 - 43775385
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| || || |||||| |||||||||||| | |  |||| | ||||||| ||| |||    
T  43775520 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgt 43775421  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | | ||||||||||||||||||    
T  43775420 aaaatgtcaaaatgtgaaaattaaaaaggaacggag 43775385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 24194 - 24064
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| ||||| ||| |||    
T  24194 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattaaatgtcttggtttatgt 24095  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaa 145  Q
    |||| |||| ||  | ||| |||||||||||    
T  24094 aaaatgtcacaaagtgacacttaaaaaggaa 24064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 43554592 - 43554650
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagtatgaa 160  Q
    ||||| ||||||||||| |||||||| | |||||||||||| |||||||  ||||||||    
T  43554592 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagtatgaa 43554650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 44543776 - 44543727
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||| ||||||||||| ||||||| || |||||||||||| ||||||    
T  44543776 tatcttggtttgtgtaaaatgtcaaaaaatgacaattaaaaagtaacgga 44543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 19550455 - 19550495
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacgg 148  Q
    ||||||||||| |||||||| | ||||||||||||||||||    
T  19550455 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgg 19550495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 23771394 - 23771474
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    |||||||  |||| ||||||||  ||||||||| || |||| ||||||||  |||| |||| || ||||||||||||||||    
T  23771394 agagagagaaatacatgaaataagatattaaatgatgaaggttattatagaaaaaagataaattgttgtatcaaaagtagt 23771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 32980843 - 32980887
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  32980843 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 32980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 34266483 - 34266435
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | || |||||||||||||||||    
T  34266483 tcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaacggag 34266435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 51219136 - 51219088
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| ||||| || | ||||||||||||||||||||    
T  51219136 tcttggtttgtgtaaaatgtcaatatgtgacaattaaaaaggaacggag 51219088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 52663645 - 52663693
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||| ||| |||||||||| ||||||||||| ||||||||    
T  52663645 tcttggtttgtgtgaaatgtcaaaatatgacaattaaaaatgaacggag 52663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 7e-47; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 9602029 - 9601886
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  9602029 agagagagaaatataagaaatatgatattaaataattaaggatattataagcaaaccataagttattgtatcaaaagtagtgaaatacatttaatgtctt 9601930  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    | |||||||||||||||||||| | |||||||||||||||||||    
T  9601929 ggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9601886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 9829600 - 9829457
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||| ||||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  9829600 agagagagaaatataagaaatatgatattaaataattaaggatattataagcaaaccataagttattgtatcaaaagtagtgaaatacatttaatgtctt 9829501  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    | |||||||||||||||||||| | |||||||||||||||||||    
T  9829500 ggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9829457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 33072162 - 33072288
Alignment:
Q  16 atatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgta 115  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||| ||| ||| ||||||||    
T  33072162 atatatgaaatatgatattaaataattaaggatattataggcaaaacataaattattgtatcaaaaatagtaaaatacatttagtatattggtttgtgta 33072261  T
Q  116 aaaagtcaaaatataacaattaaaaag 142  Q
    |||||||||||||||||||||||||||    
T  33072262 aaaagtcaaaatataacaattaaaaag 33072288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 35860081 - 35860219
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||| ||||||| |||||||||||| ||| |||||||||  |||  ||||||||||| |||||||||||||||||||||||| | ||||| |||||||    
T  35860081 aatataagaaatatgatattaaataattaagaatattatagaaaaaccataagttattgcatcaaaagtagtgaaatacatttagtgtcttggtttgtgt 35860180  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggagaga 153  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35860181 aaaaagtcaaaatgtaacaattaaaaaggaacggagaga 35860219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 9142374 - 9142260
Alignment:
Q  31 tattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatata 130  Q
    |||||||| || |||||||||||||| |||| |||| || || ||||||||||||| |||   ||||  | ||||||||||||||||||||||||||| |    
T  9142374 tattaaatgattaaggatattataggaaaaagataaattgttatatcaaaagtagtaaaagt-atttgttgtcttgatttgtgtaaaaagtcaaaataaa 9142276  T
Q  131 acaattaaaaaggaac 146  Q
    ||||||||||||||||    
T  9142275 acaattaaaaaggaac 9142260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 47408229 - 47408364
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| ||||| |||||||    
T  47408229 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgt 47408328  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||  | ||||||||||||||||||||    
T  47408329 aaaatgtcaaaaagtgacaattaaaaaggaacggag 47408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 28608725 - 28608841
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||||||  |||||| || ||||||||||||||||||  | ||  ||| | | |||||||||||||||||  |||||||||    
T  28608725 atattaaataaataaggttattatagtaaaaataaaaattattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatatcaaaatat 28608824  T
Q  130 aacaattaaaaaggaac 146  Q
     ||||||||||||||||    
T  28608825 gacaattaaaaaggaac 28608841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 26724040 - 26724186
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  ||||  |||||||  ||| ||||| |||||| |||||||||||| | |  |||| | | ||||| |||||||    
T  26724040 aatatatgaaataagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaataatcattgattgtcttggtttgtgt 26724139  T
Q  115 aaaaagtc-aaaatataacaattaaaaaggaacggagagagtatgaaa 161  Q
    |||| ||| ||||| | |||||||||||||||||||| ||||||||||    
T  26724140 aaaatgtcaaaaatgtgacaattaaaaaggaacggag-gagtatgaaa 26724186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 33258051 - 33258132
Alignment:
Q  69 tattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||||| | ||  ||| | | | ||||||||||||||| ||||||| || ||||||||||||||||||||    
T  33258051 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 33258132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 17896531 - 17896483
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  17896531 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 17896483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 22950858 - 22950814
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    
T  22950858 tcttggtttgtgtaaaatgtcaaaatataacaattaaaaaggaac 22950814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 31815140 - 31815061
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | ||||||||||||||||||| || |||| || ||||||||||||||||||||    
T  31815140 attgtatcaaaagtagtaacatt-attgattatcttgatttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggag 31815061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 46715352 - 46715308
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    |||||||||||||||||||||||||| | ||||||||||||||||    
T  46715352 tcttgatttgtgtaaaaagtcaaaatgtgacaattaaaaaggaac 46715308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 47459841 - 47459889
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  47459841 tcttgatttgtgtaaaatatcaaaaaataacaattaaaaaggaacggag 47459889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 48981506 - 48981430
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaat 91  Q
    ||||||||||| | |||||||||| || |||| ||||||||| |||| |||| || |||||||||||||||| ||||    
T  48981506 aatatatgaaaaaaaatattaaatgatgaaggttattataggaaaaagataaattgttgtatcaaaagtagtaaaat 48981430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 33921901 - 33921766
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||||||||| |||||| |||||||||||| | |  |||| | ||||||  ||| |||    
T  33921901 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaaatataatttattgcatcaaaagtagtaacaatcattgactatcttagtttatgt 33921802  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| || ||||| | ||||||||||||||||||||    
T  33921801 aaaatgttaaaatgtgacaattaaaaaggaacggag 33921766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 5732147 - 5732065
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||| |||||||||||| | |  |||| | ||||||| ||| ||||||| |||||||| | ||||||||||||||||||||    
T  5732147 ttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 5732065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 7477325 - 7477191
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| ||||| |||||| |||||||||||| | |  |||| | ||||||  ||| |||    
T  7477325 aatatatgaaatgagatattaaattaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgt 7477226  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||| |||||||| |||||||||||||| ||||||    
T  7477225 aaaatgtcaaaatgtaacaattaaaaagaaacgga 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 33173976 - 33174058
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||| | |  |||| | ||| ||| ||| ||||||| |||||||| | ||||||||||||||||||||    
T  33173976 ttattgtatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 33174058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 8966036 - 8965885
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||| ||||||||  ||||||||| || |||| ||||||||| |||| || | || |||||||||||||||| |||   ||||  | ||||    
T  8966036 agagagagaaatacatgaaataagatattaaatgatgaaggttattataggaaaaagatgaattgttgtatcaaaagtagtaaaaagtatttgttgtctt 8965937  T
Q  106 gatttgtgt-aaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | |||| || ||||| ||||||  | |||||||||||||||||||| ||||||    
T  8965936 ggtttgcgtaaaaaactcaaaa-gtgacaattaaaaaggaacggagggagtat 8965885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 32528368 - 32528320
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||| ||||| |||||||||| ||||||||||| ||||||||    
T  32528368 tcttgatttgtataaaatgtcaaaatatgacaattaaaaatgaacggag 32528320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 3310408 - 3310456
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| |||| |||||| |||||||||| ||| ||||||||||||||||    
T  3310408 tcttggtttgcgtaaaatgtcaaaatatgacagttaaaaaggaacggag 3310456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 8382029 - 8382077
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | | ||||||||||||||||||    
T  8382029 tcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggag 8382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10227459 - 10227507
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| || ||||  | ||||||||||||||||||||    
T  10227459 tcttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 10227507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 30866776 - 30866728
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| ||||||| || ||| ||||||||||||||||    
T  30866776 tcttggtttgtgtaaaatgtcaaaaaatgacagttaaaaaggaacggag 30866728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 31430762 - 31430806
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  31430762 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 31430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 32966089 - 32966041
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||||||| || ||||| | ||||||||||||||||||||    
T  32966089 tcttaatttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 32966041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 36922443 - 36922491
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||| | ||||| |||||||| | ||||||||||||||||||||    
T  36922443 tcttgatttatttaaaatgtcaaaatgtgacaattaaaaaggaacggag 36922491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 4e-39; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 52759135 - 52759285
Alignment:
Q  6 agagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatctt 105  Q
    |||||||  |||||||||||||| |||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||||||||||||||| | ||||    
T  52759135 agagagagaaatatatgaaatatgatattaaataattaaggatattataattaaaacataagttattgtataaaaagtagtgaaatacatttagtgtctt 52759234  T
Q  106 gatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    | |||||||| ||||||||||| | ||||||||||| |||||||| |||||    
T  52759235 ggtttgtgtataaagtcaaaatgtgacaattaaaaaagaacggagggagta 52759285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 52825396 - 52825512
Alignment:
Q  25 atataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaa 124  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  52825396 atatgatattaaataattaaggatattataggcaaaacataagttattgcatcaaaagtaatgaaatacatttagtatcttaatttgtgtaaaaagtcaa 52825495  T
Q  125 aatataacaattaaaaa 141  Q
    ||| | |||||||||||    
T  52825496 aatgtgacaattaaaaa 52825512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 6931219 - 6931361
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||| | | |    
T  6931219 gagagagaaaagtatatgaaatatgatattaaatattcaaggatattataggcaaaacataaattattgtatcaaaagtattgaaatatatttagtgtat 6931318  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    || || || |||||||| ||||| | |||||||||||||||||    
T  6931319 tggttggtataaaaagttaaaatgtgacaattaaaaaggaacg 6931361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 2572087 - 2572217
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  ||||||||||||| |||| ||||||||  |||| |||| ||||| ||||||||||||| ||| | ||||| ||||||||| |||||    
T  2572087 aatatatgaaatgaaatattaaataattaaggttattatagaaaaaagataatttattatatcaaaagtagt-aaaaatatttattatcttgatatgtgt 2572185  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    |||||||||||||   ||||||||||||||||    
T  2572186 aaaaagtcaaaatgagacaattaaaaaggaac 2572217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 41155394 - 41155536
Alignment:
Q  18 atatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaa 117  Q
    |||||||||  | ||||||||||| |||| ||||||| | |||| |||| || |||| ||||||||||| |||   ||||  ||||||||||||||||||    
T  41155394 atatgaaatgaagtattaaataattaaggttattatacgaaaaagataatttgttgtctcaaaagtagtaaaagt-atttgttatcttgatttgtgtaaa 41155492  T
Q  118 aagtcaaaatataacaattaaaaaggaacggagagagtatgaaa 161  Q
    | |||||||||  |||||||||||||||| ||  ||||||||||    
T  41155493 atgtcaaaataagacaattaaaaaggaacagaaggagtatgaaa 41155536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 10630527 - 10630667
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  | ||||||||||| |||| ||||||||  |||| |||| || |||||||||||||||| |||   ||||  | |||| |||| |||    
T  10630527 aatatatgaaatgaagtattaaataattaaggttattatagaaaaaagataatttgttgtatcaaaagtagt-aaaagtatttgttgtcttaatttatgt 10630625  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    |||||||||||||  ||||||||||||||||| ||| |||||    
T  10630626 aaaaagtcaaaatgaaacaattaaaaaggaaccgagggagta 10630667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 31487885 - 31487765
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||||||  |||||| || ||||||||||||||||||  | ||  ||| | | ||||| ||||||||||| |||||||| |    
T  31487885 atattaaataaataaggttattatagtaaaaatagaaattattgtatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgtcaaaatgt 31487786  T
Q  130 aacaattaaaaaggaacggag 150  Q
     ||||||||||||||||||||    
T  31487785 gacaattaaaaaggaacggag 31487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 13699290 - 13699432
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  ||||  |||||||  ||| ||||| |||||| |||||||||||| | |  |||| | ||||||| ||| |||    
T  13699290 aatatatgaaatgagatattaaatgaataaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgt 13699389  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    |||| ||||||||||  |||||||||||||||||||| |||||    
T  13699390 aaaatgtcaaaatatggcaattaaaaaggaacggagatagtat 13699432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 9127775 - 9127916
Alignment:
Q  5 gagagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatct 104  Q
    ||||||||  |||||||||| |  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| |||    
T  9127775 gagagagagaaatatatgaagtgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtct 9127874  T
Q  105 tgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    || ||||||||||| |||||||  | ||||||||||||||||    
T  9127875 tggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 9127916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 8973572 - 8973442
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  | |||||||| ||  | | ||||||||| |||| |||| || |||||| ||||||||| |||   ||||  | ||||||||| |||    
T  8973572 aatatatgaaatgaagtattaaatgattgatgttattataggaaaaagataaattgttgtataaaaagtagtaaaagt-atttgttgtcttgatttatgt 8973474  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||||||||||||| ||||||||||||||||    
T  8973473 aaaaagtcaaaatatgacaattaaaaaggaac 8973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 51974292 - 51974157
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| | ||| || ||||    
T  51974292 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatacattattgtatcaaaagtagtaatatttattgaatgttttggttcgtgt 51974193  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||  | ||||||||||||||||||||    
T  51974192 aaaatgtcaaaaagtgacaattaaaaaggaacggag 51974157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 22154694 - 22154626
Alignment:
Q  80 aagtagtgaaatacatttaatatcttgatttgtgtaaaaa-gtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||||||||||||||| | ||||  |||||||||||| |||||||| | |||||||||||||||||    
T  22154694 aagtagtgaaatacatttagtgtcttagtttgtgtaaaaaagtcaaaatgtgacaattaaaaaggaacg 22154626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 2059941 - 2059798
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| |||||||||||||  ||||||||| |  ||||  |||||||  ||| ||||| |||||| |||||| ||||| | |   ||| | ||| |||    
T  2059941 gagagaaaaatatatgaaataagatattaaatgaataaggtcattatagtgaaagtataacttattgcatcaaatgtagtaacaattattgattattttg 2059842  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
     ||||||||||| |||||||| | ||||||||||||||| ||||    
T  2059841 gtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggag 2059798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 5598248 - 5598295
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  5598248 tcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacgga 5598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 35700496 - 35700361
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  |||| ||||||||  ||| ||| | ||||| ||||||||||||| | ||  ||| | | |||||||||||||    
T  35700496 aatatatgaaatgagatattaaatgaataaggctattatagtaaaagtatcaattattatatcaaaagtagtaacatttattgattgtcttgatttgtgt 35700397  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||  ||| || || ||||||||||||||||||||    
T  35700396 aaaatatcacaaaatgacaattaaaaaggaacggag 35700361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 36318521 - 36318603
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||||| ||  ||| ||| | ||| ||||||||||  |||||||  | ||||||||||||||||||||    
T  36318521 ttattgtatcaaaagtagtgacatttattgaatgtattggtttgtgtaaattgtcaaaaagtgacaattaaaaaggaacggag 36318603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 37609338 - 37609284
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
    ||||||||| ||||||| |||||||| | ||||||||||||||||||||| ||||    
T  37609338 tcttgatttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 37609284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 45230652 - 45230764
Alignment:
Q  33 ttaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataac 132  Q
    |||||| || |||| ||||| ||  |||| |||| || |||||||||||||||| |||   ||||  | ||||| ||| |||||||||||||||| ||||    
T  45230652 ttaaattattaaggttattagagaaaaaagataaattgttgtatcaaaagtagtaaaagt-atttgttgtcttggtttatgtaaaaagtcaaaatgtaac 45230750  T
Q  133 aattaaaaaggaac 146  Q
    ||||||||||||||    
T  45230751 aattaaaaaggaac 45230764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 1677401 - 1677449
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | |||||||||||||| |||||    
T  1677401 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggagcggag 1677449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13566882 - 13566930
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  13566882 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 13566930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 29830956 - 29831004
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  29830956 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 29831004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 35531329 - 35531281
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  35531329 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 35531281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 36850801 - 36850885
Alignment:
Q  63 ataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    |||| ||||| ||||||||||||| | ||  ||| | | |||||||||||||||||  |||||| || |||||||||||||||||    
T  36850801 ataaattattatatcaaaagtagtaacatttattgactgtcttgatttgtgtaaaatatcaaaaaatgacaattaaaaaggaacg 36850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 37437087 - 37437043
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||    
T  37437087 tcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaac 37437043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 38648660 - 38648708
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| |||||||| | |||||||||||| |||||||    
T  38648660 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggag 38648708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 43500709 - 43500757
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  43500709 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 43500757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 9362089 - 9362224
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  |||| ||||||||  ||| ||||| ||||||||| | ||  ||| ||||  ||| | | ||||||||||| |    
T  9362089 aatatatgaaataagatattaaatgactaaggttattatagtaaaagtataaattattgtataagaaaaagtaaaatttattgagtgtcttgatttgtat 9362188  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||  | ||| ||||||||||||||||    
T  9362189 aaaatgtcaaaaagtgacagttaaaaaggaacggag 9362224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 12124845 - 12124892
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||||||||||||||| | |||||| | |||||||||||||||||    
T  12124845 tatcttgatttgtgtaaaatggcaaaatgtgacaattaaaaaggaacg 12124892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 38569655 - 38569616
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaa 141  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  38569655 tcttgatttgtataaaaagtcaaaatatgacaattaaaaa 38569616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 52749218 - 52749265
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  52749218 tcttgattcgtgtaaaatgtcaaaatataacgattaaaaatgaacgga 52749265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 35483809 - 35483767
Alignment:
Q  108 tttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  35483809 tttgtgtaaaatgtcaaaatatgacaattaaaaaagaacggag 35483767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 52649797 - 52649715
Alignment:
Q  68 ttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||| | ||  ||| | | |||||||| ||| |||| |||||||  | ||||||||||||||||||||    
T  52649797 ttattgtatcaaaagtagtaacatttattgattgtcttgattagtgaaaaatgtcaaaaagtgacaattaaaaaggaacggag 52649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 10506927 - 10507059
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  |||| ||||||||   || ||| | |||||| |||||||||||| | ||  ||| | | |||||||||||||    
T  10506927 aatatatgaaatgagatattaaatgaataaggctattatagtacaagtatcaattattgcatcaaaagtagtaatatttattgattgtcttgatttgtgt 10507026  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||  ||| || || |||||||||||||||||    
T  10507027 aaaatatcacaaaatgacaattaaaaaggaacg 10507059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 10676033 - 10676149
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||  |||| ||||||||  ||| || || |||||| |||||||||| | | |  |||| | ||| ||||||| ||||||| |||||||| |    
T  10676033 atattaaataaataaggttattatagtaaaagtacaacttattgcatcaaaagtaataacaatcattgactatattgatttatgtaaaatgtcaaaatgt 10676132  T
Q  130 aacaattaaaaaggaac 146  Q
     | ||||||||||||||    
T  10676133 gataattaaaaaggaac 10676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 12231105 - 12231057
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||| | ||||||||||||||||||||    
T  12231105 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 12231057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13507973 - 13508021
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||| ||||||| |||||||| | | ||||||||||||||||||    
T  13507973 tcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggag 13508021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13515161 - 13515209
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||| ||||||| |||||||| | | ||||||||||||||||||    
T  13515161 tcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggag 13515209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 19929500 - 19929452
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| || |||| || ||||||||||||||||||||    
T  19929500 tcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggag 19929452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 20605658 - 20605610
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||||| ||||||||||| ||| ||||    
T  20605658 tcttggtttgtgtaaaatgtcaaaatatgacaattaaaaatgaatggag 20605610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 33720719 - 33720767
Alignment:
Q  101 atcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||||| |||||||||||  ||||||| |||||||||||||| ||||||    
T  33720719 atcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacgga 33720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 42787187 - 42787139
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||  |||||| ||||||| || ||||||||||||||||||||    
T  42787187 tcttgatttaggtaaaatgtcaaaaaatgacaattaaaaaggaacggag 42787139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 492301 - 492174
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatat 129  Q
    |||||||||||| ||||||||||| | ||||  ||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||| ||||| |    
T  492301 atattaaataattaaggatattattgacaaaccataagttattgtatcaaaaatagtgaaatacatttaatgtcttgatttatgcaaaaagttaaaatgt 492202  T
Q  130 aacaattaaaaaggaacggagagagtat 157  Q
     ||||||||||| ||||||| |||||||    
T  492201 gacaattaaaaaagaacggaaagagtat 492174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 148506 - 148554
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  148506 tcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggag 148554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 369519 - 369625
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| || || | ||||||||| |||| ||||  | |||||||||||||||| ||||  ||||  | ||||||||||| |    
T  369519 aatatatgaaatgaaatattaaatgataaaagttattataggaaaaagataaactgttgtatcaaaagtagtaaaatgtatttgttgtcttgatttgtat 369618  T
Q  115 aaaaagt 121  Q
     ||||||    
T  369619 caaaagt 369625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 15432787 - 15432928
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| || |||| ||||||||| |||| |||| || |||||||||||||||| |||   ||||  | ||||  |||||||    
T  15432787 aatatatgaaatgaaatattaaattattaaggttattataggaaaaagataaattgttgtatcaaaagtagtaaaagt-atttgttgtcttagtttgtgt 15432885  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggagagagtat 157  Q
    | ||||||||||||| |||||||||||||||| ||||||||||    
T  15432886 agaaagtcaaaatatgacaattaaaaaggaacagagagagtat 15432928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 23777412 - 23777544
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||||||| ||||| |||||||    
T  23777412 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttatttaatgtcttggtttgtgt 23777511  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    |||| |||||||  | |||||||||||||||||    
T  23777512 aaaatgtcaaaaagtgacaattaaaaaggaacg 23777544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 26485810 - 26485679
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  |||||||||| |  |||| ||||||||  ||| ||||  ||||||||||||||||||| | ||  ||| ||| ||||| ||| |||    
T  26485810 aatatatgaaatgaaatattaaatgaataaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttatgt 26485711  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    |||| |||||||  | ||||||||||||||||    
T  26485710 aaaatgtcaaaaagtgacaattaaaaaggaac 26485679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 30416200 - 30416065
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||| | |||||||||| |  |||| ||||||||  ||| ||||| ||||||||||||||||||| | |   ||| | | ||||| ||| |||    
T  30416200 aatatatgaaacagaatattaaatgaataaggttattatagtaaaagtataacttattgtatcaaaagtagtaacaattattgattgtcttggtttatgt 30416101  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| ||||| |||| | ||||||||||||||||||    
T  30416100 aaaatgtcaacatatgataattaaaaaggaacggag 30416065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 34607270 - 34607349
Alignment:
Q  71 ttgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||||||||||||||| | || |||| ||| ||||| ||||| ||||| |||||||  ||||||||||||||||||||||    
T  34607270 ttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatgtcaaaaattaacaattaaaaaggaacggag 34607349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 22784801 - 22784659
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| ||||||| ||||| | |||||||| |  |||| ||||||||  ||| ||||  |||||||||||||||||||   ||  ||| |||||||||    
T  22784801 gagagaaaaatatattaaataaattattaaatgaataaggctattatagtaaaagtatacattattgtatcaaaagtagtatcatttattgaatatcttg 22784702  T
Q  107 atttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
     ||| ||||||| || ||||  | |||||||||||||||||||    
T  22784701 gtttatgtaaaatgttaaaaagtgacaattaaaaaggaacgga 22784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 22050164 - 22050299
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||||||  ||||||||| |  ||||  ||||||   ||| ||||| |||||| |||||||||||| | |   ||| | | ||||| |||||||    
T  22050164 aatatatgaaataagatattaaatgaataaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgt 22050263  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||| | ||||||||||||||||||||    
T  22050264 aaaatgtcaaaatgtgacaattaaaaaggaacggag 22050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 1751471 - 1751421
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||||    
T  1751471 tatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggag 1751421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 11000934 - 11000809
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||  | |||||||| || |||||||||||||| |||| |||| || ||||||||||| |||| |||   ||||  | ||||  |||||||    
T  11000934 aatatatgaaatgaagtattaaatgattaaggatattataggaaaaagataaattgttgtatcaaaaatagt-aaaagtatttgttgtcttagtttgtgt 11000836  T
Q  115 aaaaagtcaaaatataacaattaaaaa 141  Q
    ||||| ||||||| | |||||||||||    
T  11000835 aaaaaatcaaaatgtgacaattaaaaa 11000809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 11129002 - 11129078
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||||||||||||||| | ||  ||| | | ||||||||||||||||| |||||||  | ||||||||||||||||    
T  11129002 attgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 11129078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 24949278 - 24949358
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | | ||| |||||||||||  |||||| |||||||||||||||||||||||    
T  24949278 attgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaaaaggaacggag 24949358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 7056265 - 7056130
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| | ||||| ||||||||  |||  |||| |||||| ||||||||||   | |   ||| | |||||||||||||||    
T  7056265 aatatatgaaatgagatattaaatgaccaaggttattatagtaaaagaataacttattgcatcaaaagtaaaaataattattgattatcttgatttgtgt 7056166  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    |||| |||||||  | ||||||||||||| ||||||    
T  7056165 aaaatgtcaaaaagtgacaattaaaaaggtacggag 7056130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 9838247 - 9838116
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    ||||||||||||   ||||||||| |  |||| ||||||||  ||| ||| | ||||||||||||||||||| | ||  ||| | | | |||||||||||    
T  9838247 aatatatgaaatgagatattaaatgaataaggctattatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgttttgatttgtgt 9838148  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||  ||| || || ||||||||||||||||    
T  9838147 aaaatatcacaaaatgacaattaaaaaggaac 9838116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 19645847 - 19645713
Alignment:
Q  17 tatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattg--tatcaaaagtagtgaaatacatttaatatcttgatttgtgt 114  Q
    |||||||||| ||||||||||| | ||||| ||||||||  ||| |||||  |||||  ||||||||||||| | ||  ||| | | ||||  |||||||    
T  19645847 tatatgaaatgtaatattaaatgaacaaggctattatagtaaaagtataaagtattgtatatcaaaagtagtaacatctattgattgtcttagtttgtgt 19645748  T
Q  115 aaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    |||| |||||||  | ||||||||||| |||||||    
T  19645747 aaaatgtcaaaaagtgacaattaaaaaagaacgga 19645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 24663582 - 24663629
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||| ||||||||||| |||||||| | |||||||||||||||||||    
T  24663582 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 24663629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 31244787 - 31244740
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  31244787 tcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacgga 31244740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 34730704 - 34730810
Alignment:
Q  43 aaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaag 142  Q
    |||| ||||||||  ||||||||  || |||||||||||||||| | || |||| ||| ||||| ||||| |||||  |||||| || | ||||||||||    
T  34730704 aaggttattatagtaaaaatatacattgttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaag 34730802  T
Q  143 gaacggag 150  Q
    ||||||||    
T  34730803 gaacggag 34730810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 3621793 - 3621837
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaac 146  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||    
T  3621793 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 3621837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 30388969 - 30389017
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | | ||||||||||||||||||    
T  30388969 tcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggag 30389017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 32359478 - 32359430
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||| |||||  ||||||| ||||||||||||||||||||||    
T  32359478 tcttggtttgtataaaatatcaaaatgtaacaattaaaaaggaacggag 32359430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 14360 - 14240
Alignment:
Q  30 atattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaa-agtcaaaata 128  Q
    ||||||||| || |||| ||||||||| |||| |||| |||||| |||||||||||| |||   ||||  | ||||||||| ||||||| | ||||||      
T  14360 atattaaatgatgaaggttattataggaaaaaaataaattattgcatcaaaagtagtaaaaattatttgttgtcttgatttctgtaaaagactcaaaa-g 14262  T
Q  129 taacaattaaaaaggaacggag 150  Q
    | ||||||||||||||||||||    
T  14261 tgacaattaaaaaggaacggag 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 8357 - 8405
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  8357 tcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 23244 - 23394
Alignment:
Q  7 gagagaagaatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttg 106  Q
    ||||||| ||||||| ||||   ||||||||| || |||| ||||||||| | || |||| || |||||||||||||||| ||||  ||||  | ||||     
T  23244 gagagaaaaatatataaaatgagatattaaatgataaaggttattataggaagaagataaattgttgtatcaaaagtagtaaaatgtatttgttgtctta 23343  T
Q  107 atttgtgt--aaaaagtcaaaatataacaattaaaaaggaacggagagagta 156  Q
     |||||||  ||||| ||||||  | |||||||||||||||||||| |||||    
T  23344 gtttgtgtaaaaaaactcaaaa-gtgacaattaaaaaggaacggagggagta 23394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 147197 - 147117
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| | ||  ||| | | | ||||||||||||||| |||||||  | ||||||||||||||||||||    
T  147197 attgtatcaaaagtagtaacatttattaattgttttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 147117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 4631 - 4702
Alignment:
Q  15 aatatatgaaatataatattaaataatcaaggatattataggcaaaatataagttattgtatcaaaagtagt 86  Q
    |||||||||||||  |||||||||||  ||||  |||||||  ||||||||| |||||| ||||||||||||    
T  4631 aatatatgaaataagatattaaataaataaggtcattatagtaaaaatataacttattgcatcaaaagtagt 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 336 - 230
Alignment:
Q  43 aaggatattataggcaaaatataagttattgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaag 142  Q
    |||| ||||||||  ||||||||  || |||||||||||||||| | || |||| ||| ||||| ||||| |||||  |||||| || | ||||||||||    
T  336 aaggttattatagtaaaaatatacattgttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaag 238  T
Q  143 gaacggag 150  Q
    ||||||||    
T  237 gaacggag 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 7595 - 7672
Alignment:
Q  70 attgtatcaaaagtagtgaaatacatttaatatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||||||||||||| | ||  ||| | | |||||||||||||||||  ||||||  | |||||||||||||||||    
T  7595 attgtatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacg 7672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 89373 - 89418
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacg 147  Q
    ||||||||||||||||| |||||||| | ||||||||||| |||||    
T  89373 tcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacg 89418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 195627 - 195578
Alignment:
Q  100 tatcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacgga 149  Q
    ||||||| ||||||||||| |||||||| | ||||||||||| |||||||    
T  195627 tatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgga 195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 69302 - 69350
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||| ||||||||||| |||||||| | |||||| |||||||||||||    
T  69302 tcttggtttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacggag 69350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 77291 - 77339
Alignment:
Q  102 tcttgatttgtgtaaaaagtcaaaatataacaattaaaaaggaacggag 150  Q
    ||||||||||||||||| || ||||| | |||||||| |||||||||||    
T  77291 tcttgatttgtgtaaaatgttaaaatgtgacaattaagaaggaacggag 77339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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